Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsLiXu_Ung0046800 | OGI:99047540 | 1/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | ChrUN-Ctg350:145155-150839 | ||||||||
Gene Symbol | JMJ717 | ||||||||||
DNA seq | ACACGGACCGTAACAAGGCCGTACCCACAAAATAGTGGATCATAAAACATGGGTTCAATTAAGTTTTTCTTGGGTTTCTAACATCTGATGATAGAAACGCAAACGTCATGGATGATCAAAACAATAACATTACGAGCCCTGAGGAGGAGGAATTGACGTTCGCCACCAGAAGCTAACAGAGAAACTAGTAGAGAGAGATCTAACGTAATGCCACCATTTTGGTGGAATGTAAAGCAGGTCACCTTCCTCCAATATGCCGTCCATGAATTCAACGTCTCCTGTCCTCGGGAACTCATTTACGTTAATGTTGTCAAGATCTACCTGCCCAGACATTGATTCAGAGAATTGAGTTCCGTGATGATCAATTTTACTTGCAACTAGTAAGCTTAGTTTCATAAATATATGACAGCAAAGGCTCAGGATGAGAGGAACATGGATAACTTGTTGGACAAAAAGAAGCAAATGATGACCAGGCGAACCAGAAGAAAATCTGGTCTCATTGTTTGTCATATTGTGTTTAAAACACAACTGAACTCAAATTTTTTGTCCCAGATTATTAAGAGACTACGCACCTGACTAATATTGCTTAGCATAGTTTCTCTGTGAGGGTAAAGGTCATTGGAGATGGAAGCAGAATAGAGTCTAAAATATTTCCTGCCCAAGACCTGTGAAGAACAGCAAATATTGAGAAAACTAAACGAAGTCCTCACCGCACCAAATAAAATTCAGTAATAGATAACCTCAATTGTTACAGCAGCCAACAGAAGCTACAAACTTACATGTAGCCATTTTGGATATGGCCACAACCTTTTATCGGAATATGAGCTTTGGTGCAGTGCAAACATTCCAGTGATCTCAAAACAGAGTGGGTGATCTACGCGTTGGATGAATACCAGTATCTGAGGGTTTCCCTTTTTGGAGAAAAACAGACAAGTATAGTCCAAGAAAGGAAGATTTACTCGTGGGCATTTGAATACAAACAAAATAGTTCGACAAATACTTCTACTATAGGAAGGAATAATACTACTAGAGAACATGTTTTGGTGGCAATAACAGCTGTGCACTCCATTTGTCTTATGCTACTTCTCAATATTGAACTCAAGAACTAATCAATTGCAAGAACTAATCAATTGAACTTCTTCAGGATGTTCATGGGCCAAGGAAAACGATACATGTTACAATAATATTAAGGGTTGATGTGTGTCTCAACTAAGATAGATGGTTACTGCCACTGTTGACGATTAACAACCCTCTATAAACCTGAGAGACATTAGTTATGCACATTCCAAAGCTCCTAGTCTCCGCAAATTACAAAATTAAAAGTGTATATAAACTAGGTAGAGAATAAATATAGATAATACAACTAAAAATCTAAAATGTCATGAAACCCGAATTATCATACAATGAAAATGGAGTAGTATCACATTACGAAGTAACAAAAGAAAAGTAGCTACATTATAAATTAAATTAGCTCTTGAAAAAATTCATGGAAAGCAGTTGTAAGAAAGAAGAATAACTTTGTTTGCATTGAAGCAGAAGTAATCTGAAATTAAACACCAAAGGATCGAGAATAACATATTCATGAGATTGAGATACCTGAGCAAAAAGGTTATGATACAGGTCATGATGCAATGGTGTAACCGTCCCTTCAGGGCCAAACCAGGCATTGAGCTTTTGGAGTTCCCCACCACCAGCGTTACAATATTCAGGAACCATTATGTCTTCACGGAGCTCTTTTATCTGTTAAATGTTGAGTACCATCAACTATTAGATGGCAACTGCTAATTCCTTATGTGTATAAACTCAAGCATATGGAGAATTGATCACCTGGTCAAACAGTGGATGCTGCGCTAGATATGTCAAGTTTGCAGACAATCAGATGACCACATCATCTCAAGAAACTGAGAAAATGTGATAAGCTCCTGTTTCCACTCACTAGACAAATATTTTTTTCCAACCTGAGACACCACTATTTATATCAGTGCACTGGGAACATCTATAAGAAAAGGGAAAATGATCAGTTCGAACACCATTCAACAAAGAAAGAAGTCCCAATTTATTTGAAGCAGAACTACACTAAGGACATAAAAATGTTTTTAAAAAGGATATGCTAAAGGACGTACGGAACACTTGAATAGACATGCATTTTGGTAGATCACATGAACAGATGCAAGAAGATAGTATGGAAGATAACCAGTTTTTAAAGGAGGATTTTTCAGGTCATGTTTTACATACTACAATACTAGATGGCACAAAAATGGTAAAACAGAAACTTGGCAAATTTCAAACCCTGCGAAAAAAGCAACAGAATTAAACCGATGATATACAATAATAATCTATATTGTAAAACAAAGAAAATAAGCTTAGGAGATTATGCCAATTTCCAAATATAAAACATGTGAATCGATCTGTTTAGAAGATCCAGCTGTTGAGGATGCAGCTCCACACATATATGTAAGTTCATTCATTATCGGATTGTCCTATCCATCCAAAGTATGCCTTGACATTTTTGCAAGGACATGGTATGATTTAGATTTTGAAAGTTTGCATCAACTTTGAAGCACACTGGATGGATAGGATTTATAAGGCAGAATATGCTAGTTTCAACATGCAATTCAATTCCTCTATGCAGCACATCTCAAATTAACATCATATATAGGAATATAAGGTATCATAATGCAAGGATAAATATGAACAGAAAAGCTCTTACAATAATAAATACTTGTGAGACCTGTTGAATTGAGGTCAAGAGGGAGTACACAAACCACTTACTGGAAAGTCACCATTTTATCGATGAATAAGATTAAAAACAGTCCTTCAGTATCACCTTATTTATTTATGAACAGCATAACTACTAATTCATTTTTTCCCCAAAAAATGCAAATTGTTCTTTCATAATTGAGGAGTGGAATAACAACACTTTATAACGGTAAATTGATGCATAAAACATAAGTATACCTCAACAGGAACAGTCCGATCTCCTGCAATCCTCTCTAGGTATCTTATGTCCTTCCACTTTGTCCGTGCAGGCCAGTGATCGATGTAGCCACTGAGTATAACAGGGGACTCACATAAAAAGTAATCACGTATAAATGCCTCCAAAGAAATGCATGATCGCCTCTCGATTTGCTTACAAGATAAGGACTTCACTGGCAGAACTTTGAGCACCTGAAATAAATCAATATTAACTGGCTGACAGCAGCACAATAACAAAGTAAGAAACGGAGCATAATCACTCAAATTGGACTATCAACGAATCCAGAGAAATGGGCAACAATGTACTCAGTGATGCTGTTGGTAACTTGGTATTCCAAACAAAATGATCACATTTGGCTTGACATAGGTCACCCACAACTAACAAAATCGATCCACTGGAGCCAAGTTCCAATTAGGAAATCACATGGCTGAACATCAGTGACTGATATGCTCTATATGTCAAGCAACATGACTACCAGTAAAGGAAAGGCACCAAACATCGCATTAATATTCCTAACTTAAAAAGATATACTCCCTCTATTTCATAGTATAAGGTATGATCAAACTTGGTACGGTCTACAAAACTAATTTTTGACTTATTATTTCTTATATACCATAAAGTTTGTAGCAGTGAAAGGGCATGTAGCCTAGTGGTTGCAGTGACCTGAGTAGCACCCAAGGCCCTGAGTTCAAATCTCCATAGGAGCGAATTTCAGATTGGGTTATTTGAGGGCTAAGCTCTCTATTTGATAGGCTAAGTTCCTAAGTTAAAATGGCTGTATATATCCGGTTGGATATAGAGGCTGAGTAAAAAAATACCCTTCTCTAAAAAAATAAAAAAAATAAAGTTTGTAGCAACAAAATTATAACCATATGAAAGTATATTAAAATATCAATCCAATGATATTATTTTCAGCAAATAAAATTCAATTTATATTATACTAATCGTTAGTCGAATGTTTTTAAAGTTGAATCTTGAAATGCGTGCGCACCTTACATTACGAATGGAGGGAGTAATTCATAACTTTTTTTTCAACCGTTAGTTGAGTGCACCCAGATGTCTGGAACCTGTGCATCACTCATGCCACTTAAAATGGCAAATCCTTAAAAGTTCGGTACCTCCTCAATTTGCTGGGTGACAAAACATTGTGTGCGTGTCCTTAAACTCTGTATCTCCTCTATCTGGTAGCTGTACTCCTATCTCATGGAAATTAATACAACTTTCAAAATAAATCCAGGTCTTAGGCCCTGTTTAGATCCCCTGGCAAAAATTTTCACCATGTCACATCGAATGTTTGGACACATGTATGGAGTATTAAATATAAACGAAAAAAATAACTAATTACACAGATTGCGTGTAAATTGCGAGATGAATCTTTTAAACCTAATTGCTCCATGGTTTAACAATGTGGTGCTACAGTAAACATTTACTAATGACGGATTAATTAGGCTTAATAAATTTGTCTAAGTTTACAGGCGGAATCTGTAATTTGTTTTGTTATTAGTCCACGTTTAATACTTCAAATGTGTGTCCGTAATTCCGTATATCCGATGTGACATGCCAAAACTTTTTACCCTGGATCTAAACACAGCCTTAATAATGGGAAAAATTGTGAAAATTATGAACCGGACAATTGCACGAGGCCACGAGCTTATGAGAACTGCGGTAGTGGGAATGTGGGATGCAATGTGCACCGAGATAGTGCCACATTCGAGGGTTCTCACTTCTCAGCTAGTATGGCGGTGGATGTTACAGAAAAATATCTTGTGCGAACCAATTCAGTGAGTAATTCACCAGGACTACTGCTGTACATGGTACGAAATTGCGACACGTTTTGGCTCTATCTAATTTTATCACTGCATTTTCCAATGCACCTAAACTACAAAACTCAGGATTCATCACAGCAAGCAGAGGACGAAACCAAGATGCGATAGGTTTGAGGAAATACTCACATCGGCGAGGTCTCGTTTCCTGGTTAGGCCTTCCATCCATTTCTCAACATCAGCTCCGTTCTCTCCGGCGCCGTCGCCACCACCGCCACCGCAGCCGCGGCTACGGTCGGCGACCACCCGCGCGATGGCTTCCTCCAGCTCGGCGCGGAGGAGGTCGCCACCCATGATGAGGCCCATGTCGAGCGCCCGGAGCGCGGCTCGTCGGCCGTCGCCGCCGCCGCCGGCAACGCGGAGCGCGGCCACGTGGAGGCACGCGAGCGCGTAGGCGTCCCTCCACGCGCGCCCGACCTCGCTCCGCGGGCACGCGTGCAGCTGCTCCCACGCCATCTCCCGCGCCGCCTCCGCCGCGCGGAGGTCCCCGTCGGCCGCCGCCTTCTCCGCCGACGCCACGAACGCGAACCCGCCTTCCTCCGTGATCTCCCTCAGCAGCGCCGCCCGCTTCTCCCCGCCCTCCGCCGCCGCCGCCGCCCGCGGCTCGCCGCCGGTGGCCATCGGAGCGGGGAGAAAAAGCGCAAAAGAGGAGGAGATATTTTCGGGGGTGATGAGGTGGTCGGTTGCGTAGGCGAGGCTCGAGCTCGAGTCGAGGGTGGTGAGATATTTATGGTGCGAGATATTTTCTCGCGGAAGATCATTCTGGAATGTTCCGGAAAAGAGTGAGAGTGTGCTCCTGGATGGAGGAGCTTGGGTGGTGGTCGGTGTCGGCGTGGAGCCATTTTCTCCATTCGAATGGGTGTGAACAATTTGACAAGAAAGCAT
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CDS seq | ATGCTTTCTTGTCAAATTGTTCACACCCATTCGAATGGAGAAAATGGCTCCACGCCGACACCGACCACCACCCAAGCTCCTCCATCCAGGAGCACACTCTCACTCTTTTCCGGAACATTCCAGAATGATCTTCCGCGAGAAAATATCTCGCACCATAAATATCTCACCACCCTCGACTCGAGCTCGAGCCTCGCCTACGCAACCGACCACCTCATCACCCCCGAAAATATCTCCTCCTCTTTTGCGCTTTTTCTCCCCGCTCCGATGGCCACCGGCGGCGAGCCGCGGGCGGCGGCGGCGGCGGAGGGCGGGGAGAAGCGGGCGGCGCTGCTGAGGGAGATCACGGAGGAAGGCGGGTTCGCGTTCGTGGCGTCGGCGGAGAAGGCGGCGGCCGACGGGGACCTCCGCGCGGCGGAGGCGGCGCGGGAGATGGCGTGGGAGCAGCTGCACGCGTGCCCGCGGAGCGAGGTCGGGCGCGCGTGGAGGGACGCCTACGCGCTCGCGTGCCTCCACGTGGCCGCGCTCCGCGTTGCCGGCGGCGGCGGCGACGGCCGACGAGCCGCGCTCCGGGCGCTCGACATGGGCCTCATCATGGGTGGCGACCTCCTCCGCGCCGAGCTGGAGGAAGCCATCGCGCGGGTGGTCGCCGACCGTAGCCGCGGCTGCGGTGGCGGTGGTGGCGACGGCGCCGGAGAGAACGGAGCTGATGTTGAGAAATGGATGGAAGGCCTAACCAGGAAACGAGACCTCGCCGATGTGCTCAAAGTTCTGCCAGTGAAGTCCTTATCTTGTAAGCAAATCGAGAGGCGATCATGCATTTCTTTGGAGGCATTTATACGTGATTACTTTTTATGTGAGTCCCCTGTTATACTCAGTGGCTACATCGATCACTGGCCTGCACGGACAAAGTGGAAGGACATAAGATACCTAGAGAGGATTGCAGGAGATCGGACTGTTCCTGTTGAGATAAAAGAGCTCCGTGAAGACATAATGGTTCCTGAATATTGTAACGCTGGTGGTGGGGAACTCCAAAAGCTCAATGCCTGGTTTGGCCCTGAAGGGACGGTTACACCATTGCATCATGACCTGTATCATAACCTTTTTGCTCAGGTCTTGGGCAGGAAATATTTTAGACTCTATTCTGCTTCCATCTCCAATGACCTTTACCCTCACAGAGAAACTATGCTAAGCAATATTAGTCAGGTAGATCTTGACAACATTAACGTAAATGAGTTCCCGAGGACAGGAGACGTTGAATTCATGGACGGCATATTGGAGGAAGGTGACCTGCTTTACATTCCACCAAAATGGTGGCATTACGTTAGATCTCTCTCTACTAGTTTCTCTGTTAGCTTCTGGTGGCGAACGTCAATTCCTCCTCCTCAGGGCTCGTAA
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Protein seq | MLSCQIVHTHSNGENGSTPTPTTTQAPPSRSTLSLFSGTFQNDLPRENISHHKYLTTLDSSSSLAYATDHLITPENISSSFALFLPAPMATGGEPRAAAAAEGGEKRAALLREITEEGGFAFVASAEKAAADGDLRAAEAAREMAWEQLHACPRSEVGRAWRDAYALACLHVAALRVAGGGGDGRRAALRALDMGLIMGGDLLRAELEEAIARVVADRSRGCGGGGGDGAGENGADVEKWMEGLTRKRDLADVLKVLPVKSLSCKQIERRSCISLEAFIRDYFLCESPVILSGYIDHWPARTKWKDIRYLERIAGDRTVPVEIKELREDIMVPEYCNAGGGELQKLNAWFGPEGTVTPLHHDLYHNLFAQVLGRKYFRLYSASISNDLYPHRETMLSNISQVDLDNINVNEFPRTGDVEFMDGILEEGDLLYIPPKWWHYVRSLSTSFSVSFWWRTSIPPPQGS |
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Function | Lysine-specific demethylase JMJ30 [UniProtKB/Swiss-Prot:Q8RWR1] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsLiXu_Ung0046800 | OsLiXu_Ung0046800.01 | ChrUN-Ctg350 | 145155 | 150839 | - | NAM | ||
CDS seq | ATGCTTTCTTGTCAAATTGTTCACACCCATTCGAATGGAGAAAATGGCTCCACGCCGACACCGACCACCACCCAAGCTCCTCCATCCAGGAGCACACTCTCACTCTTTTCCGGAACATTCCAGAATGATCTTCCGCGAGAAAATATCTCGCACCATAAATATCTCACCACCCTCGACTCGAGCTCGAGCCTCGCCTACGCAACCGACCACCTCATCACCCCCGAAAATATCTCCTCCTCTTTTGCGCTTTTTCTCCCCGCTCCGATGGCCACCGGCGGCGAGCCGCGGGCGGCGGCGGCGGCGGAGGGCGGGGAGAAGCGGGCGGCGCTGCTGAGGGAGATCACGGAGGAAGGCGGGTTCGCGTTCGTGGCGTCGGCGGAGAAGGCGGCGGCCGACGGGGACCTCCGCGCGGCGGAGGCGGCGCGGGAGATGGCGTGGGAGCAGCTGCACGCGTGCCCGCGGAGCGAGGTCGGGCGCGCGTGGAGGGACGCCTACGCGCTCGCGTGCCTCCACGTGGCCGCGCTCCGCGTTGCCGGCGGCGGCGGCGACGGCCGACGAGCCGCGCTCCGGGCGCTCGACATGGGCCTCATCATGGGTGGCGACCTCCTCCGCGCCGAGCTGGAGGAAGCCATCGCGCGGGTGGTCGCCGACCGTAGCCGCGGCTGCGGTGGCGGTGGTGGCGACGGCGCCGGAGAGAACGGAGCTGATGTTGAGAAATGGATGGAAGGCCTAACCAGGAAACGAGACCTCGCCGATGTGCTCAAAGTTCTGCCAGTGAAGTCCTTATCTTGTAAGCAAATCGAGAGGCGATCATGCATTTCTTTGGAGGCATTTATACGTGATTACTTTTTATGTGAGTCCCCTGTTATACTCAGTGGCTACATCGATCACTGGCCTGCACGGACAAAGTGGAAGGACATAAGATACCTAGAGAGGATTGCAGGAGATCGGACTGTTCCTGTTGAGATAAAAGAGCTCCGTGAAGACATAATGGTTCCTGAATATTGTAACGCTGGTGGTGGGGAACTCCAAAAGCTCAATGCCTGGTTTGGCCCTGAAGGGACGGTTACACCATTGCATCATGACCTGTATCATAACCTTTTTGCTCAGGGAAACCCTCAGATACTGGTATTCATCCAACGCGTAGATCACCCACTCTGTTTTGAGATCACTGGAATGTTTGCACTGCACCAAAGCTCATATTCCGATAAAAGGTTGTGGCCATATCCAAAATGGCTACATGTCTTGGGCAGGAAATATTTTAGACTCTATTCTGCTTCCATCTCCAATGACCTTTACCCTCACAGAGAAACTATGCTAAGCAATATTAGTCAGATCTTGACAACATTAACGTAA
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Protein seq | MLSCQIVHTHSNGENGSTPTPTTTQAPPSRSTLSLFSGTFQNDLPRENISHHKYLTTLDSSSSLAYATDHLITPENISSSFALFLPAPMATGGEPRAAAAAEGGEKRAALLREITEEGGFAFVASAEKAAADGDLRAAEAAREMAWEQLHACPRSEVGRAWRDAYALACLHVAALRVAGGGGDGRRAALRALDMGLIMGGDLLRAELEEAIARVVADRSRGCGGGGGDGAGENGADVEKWMEGLTRKRDLADVLKVLPVKSLSCKQIERRSCISLEAFIRDYFLCESPVILSGYIDHWPARTKWKDIRYLERIAGDRTVPVEIKELREDIMVPEYCNAGGGELQKLNAWFGPEGTVTPLHHDLYHNLFAQGNPQILVFIQRVDHPLCFEITGMFALHQSSYSDKRLWPYPKWLHVLGRKYFRLYSASISNDLYPHRETMLSNISQILTTLT
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Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsLiXu_Ung0046800 | OsLiXu_Ung0046800.02 | ChrUN-Ctg350 | 145284 | 150839 | - | NAM | ||
CDS seq | ATGCTTTCTTGTCAAATTGTTCACACCCATTCGAATGGAGAAAATGGCTCCACGCCGACACCGACCACCACCCAAGCTCCTCCATCCAGGAGCACACTCTCACTCTTTTCCGGAACATTCCAGAATGATCTTCCGCGAGAAAATATCTCGCACCATAAATATCTCACCACCCTCGACTCGAGCTCGAGCCTCGCCTACGCAACCGACCACCTCATCACCCCCGAAAATATCTCCTCCTCTTTTGCGCTTTTTCTCCCCGCTCCGATGGCCACCGGCGGCGAGCCGCGGGCGGCGGCGGCGGCGGAGGGCGGGGAGAAGCGGGCGGCGCTGCTGAGGGAGATCACGGAGGAAGGCGGGTTCGCGTTCGTGGCGTCGGCGGAGAAGGCGGCGGCCGACGGGGACCTCCGCGCGGCGGAGGCGGCGCGGGAGATGGCGTGGGAGCAGCTGCACGCGTGCCCGCGGAGCGAGGTCGGGCGCGCGTGGAGGGACGCCTACGCGCTCGCGTGCCTCCACGTGGCCGCGCTCCGCGTTGCCGGCGGCGGCGGCGACGGCCGACGAGCCGCGCTCCGGGCGCTCGACATGGGCCTCATCATGGGTGGCGACCTCCTCCGCGCCGAGCTGGAGGAAGCCATCGCGCGGGTGGTCGCCGACCGTAGCCGCGGCTGCGGTGGCGGTGGTGGCGACGGCGCCGGAGAGAACGGAGCTGATGTTGAGAAATGGATGGAAGGCCTAACCAGGAAACGAGACCTCGCCGATGTGCTCAAAGTTCTGCCAGTGAAGTCCTTATCTTGTAAGCAAATCGAGAGGCGATCATGCATTTCTTTGGAGGCATTTATACGTGATTACTTTTTATGTGAGTCCCCTGTTATACTCAGTGGCTACATCGATCACTGGCCTGCACGGACAAAGTGGAAGGACATAAGATACCTAGAGAGGATTGCAGGAGATCGGACTGTTCCTGTTGAGATAAAAGAGCTCCGTGAAGACATAATGGTTCCTGAATATTGTAACGCTGGTGGTGGGGAACTCCAAAAGCTCAATGCCTGGTTTGGCCCTGAAGGGACGGTTACACCATTGCATCATGACCTGTATCATAACCTTTTTGCTCAGGTCTTGGGCAGGAAATATTTTAGACTCTATTCTGCTTCCATCTCCAATGACCTTTACCCTCACAGAGAAACTATGCTAAGCAATATTAGTCAGGTAGATCTTGACAACATTAACGTAAATGAGTTCCCGAGGACAGGAGACGTTGAATTCATGGACGGCATATTGGAGGAAGGTGACCTGCTTTACATTCCACCAAAATGGTGGCATTACGTTAGATCTCTCTCTACTAGTTTCTCTGTTAGCTTCTGGTGGCGAACGTCAATTCCTCCTCCTCAGGGCTCGTAA
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Protein seq | MLSCQIVHTHSNGENGSTPTPTTTQAPPSRSTLSLFSGTFQNDLPRENISHHKYLTTLDSSSSLAYATDHLITPENISSSFALFLPAPMATGGEPRAAAAAEGGEKRAALLREITEEGGFAFVASAEKAAADGDLRAAEAAREMAWEQLHACPRSEVGRAWRDAYALACLHVAALRVAGGGGDGRRAALRALDMGLIMGGDLLRAELEEAIARVVADRSRGCGGGGGDGAGENGADVEKWMEGLTRKRDLADVLKVLPVKSLSCKQIERRSCISLEAFIRDYFLCESPVILSGYIDHWPARTKWKDIRYLERIAGDRTVPVEIKELREDIMVPEYCNAGGGELQKLNAWFGPEGTVTPLHHDLYHNLFAQVLGRKYFRLYSASISNDLYPHRETMLSNISQVDLDNINVNEFPRTGDVEFMDGILEEGDLLYIPPKWWHYVRSLSTSFSVSFWWRTSIPPPQGS
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
A3 | ChrUN-Ctg350 | 145471 | 145727 | - | OsLiXu_Ung0046800.02 | OsLiXu_Ung0046800.02,OsLiXu_Ung0046800.01 | All |
SE | ChrUN-Ctg350 | 145819 | 146751 | - | OsLiXu_Ung0046800.01 | OsLiXu_Ung0046800.02,OsLiXu_Ung0046800.01 | All |
Expression
Leaf | Root | Panicle | |
FPKM | 0.938835 | 0.0 | 0.000000 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0508500 | SBH | 8.110471 | 9.454987 | 0.0 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g39810 | SBH | 2.725888 | 2.565107 | 0.0 |
Nipponbare | IRGSP 1.0 | RAP-db | Os08g0508500 | SBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0021590 | SBH | 0.135673 | 0.000000 | 0.378922 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0021480 | SBH | 0.159647 | 0.000000 | 2.409049 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0021360 | SBH | 1.291684 | 3.200754 | 6.329216 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0021550 | SBH | 0.127948 | 0.058779 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0021410 | SBH | 4.110737 | 1.082866 | 1.070793 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0402500 | SBH | 4.980449 | 12.506947 | 0.4051785 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0021290 | SBH | 0.726132 | 0.0 | 0.059120 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0422500 | SBH | 8.8596075 | 10.939937 | 5.3243255 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0020620 | SBH | 0.167189 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0020920 | SBH | 0.639254 | 1.693412 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0020750 | SBH | 3.253015 | 0.000000 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0021600 | RBH | 0.438924 | 0.000000 | 0.000000 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0020960 | SBH | 0.223616 | 0.676377 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G021100 | SBH | 1.240707 | 1.585158 | 0.488496 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0021290 | SBH | 1.680198 | 2.922653 | 0.221239 |