Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_Ung0015890 | OGI:04021260 | 10/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | ChrUN-Ctg119:185450-195009 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | attgctatcgcgtccgagttcagaacacacaaaaacacatgccatgccgtgtccgtcctgtcgctgcaacagcggcagcatcgtcttcctcctcgtcgaggtggtggcgatccttttcaccggagcgacgtccaaagacaccacgaatccattcacttcgctcgactgcccctcgccgccaccctcggcttcgccgtcgccaccctcatcagcgatcaacagcacgttccaatccaacgtgttggcgctcctcgacgacctcccttccgccgccggccccaccgggttcgcctccctgtcccgcggcgaaggcgccgaccgcgcgttcgtccgcggcatgtgccgcggcgactccacgccggacgactgcgccacctacctccgcagcgccgtgctggacatcaacggccactgcaactccaaccgccgagccgccatctggtacgacaagtgcttcctcagctacgccgacaccaacgcatccaccgcctacgagaacagctaccacgcggagctctacaacgtcaacaacgtcaccgacaaggtcggcttcgagaggacgtactacgcgctgatgagccgcctcagggcgcgggccgcgaacgacacggcgcggatgttcgccgcgggagaggcggtgtacgaccccggcgccgacaacgggacgatgtacgggctggtgcagtgtatgagggaccgcacggcggcggagtgcgaccggtgcttgaacgactcggtgcagcagctgccgagctgctgctggggacaccagggtggggtggtgctcggctacaactgctacgtacgcgtcgaaatatacacctactacgatctcaccgtcgatgcgcagccgccgtctcccggcccgtcggcctccagctcgaagccgtctatcggagaagggcagggtgagccagcttcgattctccagttaactgcacttgtacactagtgcatgcatgttaatttatcatatactaggacttaaagagttaagaccttctgctgaaaaagcttttattttcttagaaaaaaatattttactaattgctatgcgaactattttcgaaattcttttcatagaactatattcattatatctgtaaactactgacaccggttttgagtgttttaacgggtccttcctcccagtacaatgtgaaacttgacctagtcaaatcaactccatgcttcacgctaattaagtactctctccgaattgataatacttattgataagggcacggtcaccaaaaaacaactttgaccattattttctattataatatatataaagtgttaacaaatatatgattttattaaagtactttttaaaactaatctatacatttagtcgccatatttgaaagtcaaatattttaaatatgattcataataaagattctaaagtttgacctctccctgatttaaacgacaagtattatcagcccgaagggagtactactactactgcttggcaaaaccgtgttgtaaaataaattagtttgggataaaaattgtagtaccggaataattgattttctagatatatataaatatatatatatatatatatatatatatatatatatatatatatatatatatatatatttgctcttttttctcgattttttttttgcaaatcttggttaaaaacctgtaatttcaaagagttttggtcatgtcttgctctgcccattgctaaattagcaagaatatagctgacagcttgatccatatacattagcagttaaacaaggtagcaggataattaaaccctattatggcaaagtttttttggtcaagtcttgctttatgaaagtgagctagcttaggcagctgtccaatcctaaattagctacaccatgttcctttgtctcaggataacttaatctaatatgtgatgtgacccatcctagctaatattttcttcgtcccagaaaaaccgtaattttgcactgtttatgtccaatatttgaccgtccgtcttatttaaaaaaaattatgattagtattttggttgttattagatgatacaacattaatagtattttatgtgtgacttttttttcattttgtataaaattttcaaataataccgacggtctgacatgaaaactcagaactatcattaaattgagacggagacagtacaatcaatctggctgctgctgaatgcttgatgcacatgcagcagatactaacaatgtgacaggataaacagcttcatctagtcaggtcgctttcagagttttctgactgctcgatactagagaataatgatatttgttttttccagctggcttgtttagacgataagctttacctcttctaattaaaaaatatcttcaataaagcagtacttacattatgttattcgtgaattttgtggaagacccatatttcttgcatttgttcgagataaaaaaaaatctatcttacacagttagaactgactaaatatctattagtatgtggtcccacctgtcatacacacattgcgtcttggagtccgtgctacagttagctacagatctgtagcccgctgctcttctttctcatcttttatctcattaaaatatgtttgtagctgactaagggcacccacaatggttatctataggctctctacaagagatccatgtcagcatatttttctacttggaatgtattaaatgaagagagagagcaaaactatctactaacttaaagatagtctatagagaaaaacgaggcaatgcataagagagctatagatatcaatgtagacatactattaaggtggtttactgttaatcgagtctattgctgagatgtacatgttttatagatagcaccttactttaccattgcgggtgctataatattatgctattttacttgctctaagccacatgctccacagtacacggtagccaatagtgggtcccactgggtctcttttccatatcccaatctctctctccgctattacttttttcaccagggaatccaaggcagctcacgaaggcgccgagcgtccaggcggaccgagtagcgacggtgctgggcggcggggtggtcaagcggcgactgcaccggcgaagcggcctgagcggtcgagcggcgtggcccaagcggcgccggcggcgaggagcgagcggcaactctcccgccccttcctctcctcgtcggcgccggaatgcgccggcgcaaccctccccctaccctcctcggcagcgatagatgctcgacgatgacgaacttggtccctctcggcagcgacgaatgctcgacggtggcgggcatggagctcagtcggaggcggacttggaccccctcttcttgtgcgccgccgccgcttccatcttcttcgtggagttcgcccgcgacctcatcttcctcgtggacgacgagcggcggcgcggtcatcctcgcaaaggtcgccgccgaccggagccctgtcgccgtcttcgtctttcttgcggagctgggatgagcggcggcccgagcggtgacggggcagccagatctgccctgggcgtcggtgtcgggcgtcgcgcggagcggccgtgttgggagtgggggatggcgagctcggcgggggcgtcccaagcggcgaaggcagcatctcaatgccggcgccacctcaccatctctcctctcaacgcaacaccgtgcatcacctcagtcctctctcctcggccctttctcccttctctgtggtgcaggacacgaaaatgtgggcccagagttgccgattctgacgaggtacctgtggcaaaacttggctatgcattcttcctgtagcaagggaatagtccgacgtggaatgaaatctttgagctggccggcttgggctgagtgtcacatcactgcattgtaaatggcctaagacaacatgctggtggtccccaatctgccatcccaccaactttattctataccactttcatcctaaaatatattttctccgtctctcaaaatataagtatttttggattttgacacagtcttcgagatgttaatttaaccaataatatctataaaaataagatgttttaaataaaaagagttgcatagtataatactttgtttaatgataaatcaagtaacatcaattttatatgattgatcttttttatttttttctattaatagttaaagataaaaaatgtttgacttgacactattctaaaaatccttatattttgggacagagtagtagcaattgttagttatgtatcttttcggataaataaccaataattgttataatttggatggtggaatattatttgtataatagaatatgtatgtgatatttggcatattttataattttgaacccaaatgagacctatggaatgtaaatatcttaaataaaaaaagattcatcgataggatttatttctttgacaaatagataaaatatagtattaagcaaatatctttgaatttgtttaataatttaattggacataagaaagaattgattatgggtttaatttcattatctttattcaggttgatttatgttttagtttgtaaggcatataaatgtatcttagttcaatttgggaaaataatatttatttgaaagaatataacattttatttgtaaaataatttattttagttttcgttcaaactaaaataaaagcatatatcattttgattgggttatcaattgctcagccaacagaaaaccgtcatcggtgcacaaacaaaatcaactcagcacggtctatcacattcgcctcttctctcgatctttctgctcttgttctttcttagttttccggcggttctatctctcctccaagacaaatggaatcctctcccctatgcactctctatcctcgcggtggagttctccaataccttgatcatcacctatgcccacccttgcctcctctttttgcccggtctgtcggatctgagaatgatggtgtttggggatgtccaatccactcagtggcggtggttcttggggccgacagatctatgcatgagaaggcataggcttggcagatccatattcttcctgccgcccctttcttgctctgagctcaaagcctgcaggaatgcaggatgaggatgccacagaggcaacttctgtaggggatcatgggctcatggcggtggcagatctggtgggtagaggacattgtggaataggagaaataggatagggaagcggtggccgagatggagaagggagagggggaggcacagtcgcgcggatggttgatgactgatgacgcatcagtaggctggttgcttggccatggtctgcacactctctgtttttatcaacctacgtttttgttgcaactcctgtggttcggttcttgtagctttcattaagtcattataaattcaatttcctaataaatcattaatcatgacatcccaatcttgttttatgtttattatacagatatatccagaggaattgtttcgaaatatcacaattaatctgttcaaaacaatactaccatatgtacaactcatatttacccatagcaaatcacaggtaattagctagtatttccaaagttaaaatgactaatctaaggtatagattggaaaacaagttttctatctatatctcaaattattgtattaaagttttgtggatcaaatgctccactgatattcagggaggattcaaagaattttgccgtgtatatttctctttcaaataatagctttcaagctttcactccaactaatcatgcaggaaagaaggggacaaatgtgattgttgccaccacagtttctattggaacaatactactagtggctgtctttattgccgttttcatctacaggagaaagacaacgaagacaatgataccaccaggtatgacatgcactaaaaaaaaatccattttggaagacgaacccattttactttacagacggtacataagaacgtctgttctatacatctgggcccgtagtcatggaatgcttctacacattgatttttcgttttctgctgccagattactagtataccgatattaccataagataagtctatatctagaatctgtcaaaataattatctcgtactcaaactcatatataattcgcattagatccgctcgaaagaatttacataagcttacatgaacataacataaatttacataagctgacgttatttaaatttaaatagtatgtagaatgatgattcaaatgtaaaagtaatatgatgtggtttatgagagaacaaaagaaggaagataatttagatcatacatctacgggctaaaaaaattaaaatgatatggcttaatgagagaagaaaaaaaagagataatttgagccatagaataatcatctaagaactaaatgcaattgatgtgatatgatttaatggcaaaaaagaaaaataacatgaactaagtgatgatgaactatataggtgtataggatattataaaaaaatgatggagcgatatattgaaatattatgtgaattatgtcggacgatataacatacttacttttaaatctctaaagtttaataaaattattaaattagagataatatagcatgcttgcatgatacttaaatgtaataattgtttgtggatgatgatgtggcatctttacatgttaagttttagaaattagtgggctacaactttattgtaagagtggatttataaaatgaaatccttctagaggaataaaaatatacccattacacagcgtgcatgtaacttctgaatttcagtatacgaaagtgtccagatagcacggtgcaatgtacgatttattgccaagacaactcatataaagtaatacatcggaggctcaatattaagttctgatgcgacaaaatatgtgattgcaaatgattcacaatgtaatcttgcgtgcccccaattccctttcttcgtttcgtaacccaaatgattgaaatagctaagacaccgagataaacttttaacacagaagatgaaactttcaactaataaaatgaaactttctatgaaaagcctatcgatttcaatttttttttaaaaaaaatgctctgaaactctcaattgaaataaaactttttgcatctccctagaaatttcaaatcaattagattgtggaagtgcaataaatatcagtctttggcctcagctagctacgtcccctcgcactcatgcgtctacattttttttttgtcagacaacaccggcaatgaggaggacaatgactatgttgacccaccgacccttaacttaacagtgttgagagctgcaacaaggaacttctcggcagaaaataagctgggagaaggaggtttcggagaagtttttaaggtacattttcaactgtatataaagcaaagtttacatttcgacacccatacataatgggaacaaaacactctaacctgctcaaaactaggaagcatgtctcagatgtcttagagatacaagaggaagtagagaaaggaatcagtcagtgttatagaattaatcagcaataaaaaatcggtttatatcaccaaaagtacttgcagtaatgaaagtgaaattcaagcatttgatttgtttttcttcaaaagagtgcatttatagcttgtaaatataaagtataaccttaggacatctttggttactagtactagtactaagttgccataagttataactgtgggttgtccttaaaaatgtaacttatgacaactcacagttggaatggtctaacaatgtcatgggaaaaataatttctttttacagctagggatgggagtattgggcccatgcatttccatccctacatctaagcacaaagtaattcatttttccagggtatactagaagacggggaagaaatagcagtgaaaaggctttcgaagacctcctcacaggggttccatgaattgaaaaatgaactcgtgctagctgccaagctcaagcacaaaaatttggtgcggttactaggtgtttgcttgcaggaagaaaaactacttgtgtatgaatacatgcctaatagaagcctagataccatcctttttggtaattcctccaactatgtttgtccatcatgctctgatattgaaaaaatgaaatactaaaattcgtatatcaagagtttagatccattttatgccgctaagtctcgtgcatgttgctcacttttgggctcaccaaagggaagtatgcatatccatggaacttagtgacataagatgtcttcatccatatcttgattagactgtccatgtatttaatttgcagagcctgagaaacgacaacaactggattggagaaaaaggtttatgatcatttgtggaattgctcgaggccttctatatctgcatgaagagtctagccagaagatcatacatagggatctgaagccaagcaatgtcctattagatgaggatatgatccccaagatctcagattttggccttgccagggcttttggtggagagcaatcgaaggatgttacaagacgccctgttggaacgctgtaagtgtattataagatcctgtactaaactctacctcttcggatgcactgtgacaattgaatgatttgaacattgtccgtatgagacacgttcaaatcgagcaggcacttgccatctatctttgctcaactctttgatgaaaagagtcaaaagactgcttacttatttttcctgttggcattactatttcttgcagtgggtatatgtcgccggagtatgcctactgcgggcatgtctccactaagtcagatatgttcagttttggggtcattgttcttgagatggtgaccggtagaaggagcaatgggatgtatgcttccaccaagtcagatacttatgaatctgccgactccacgtctctactgagctacgtgagtacatattgaggactaatagctttagtttctaactatgtttagagaaaaacgtacgtacatgctctagcttccagttcatgaacaacgagctccatcattgtgcaggtatgggagaaatggaggacacgatccctagctgacgaagtggacgcgtcgttgggtggccgataccctgaaaacgaggtcttcagctgcgtgcagattgggctactgtgtgtccaagagaatccagctgacaggccggacatttcagctgtggtgctaatgctgagcagcaattccacgtcgctgcagactccttctaagccggcgttcttcttcggctctggcagcatcgccagcttggatgctgctggtggacatgcatttttcggtggccgggtttcagaagttgcggccatcagcagtaacaagatgtccagtaaccccatttcagagaatgaggtcacgatttcagagcttcaaccgaggtagaagaacaaatgcgtctgcatcaattgtcagtattcaggacacttgatgtccctcgaatatcggtggtaatatggcaagtaattatcatgttctgataatgtccaacagataagttagtgttcagcgtataaattaataaactaaagcgcctctccaaatctctctaagaatgcattcccggtatgaaactaatggaaaagctataatgatatcgattagatcgcacattt
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| CDS seq | atgccgtgtccgtcctgtcgctgcaacagcggcagcatcgtcttcctcctcgtcgaggtggtggcgatccttttcaccggagcgacgtccaaagacaccacgaatccattcacttcgctcgactgcccctcgccgccaccctcggcttcgccgtcgccaccctcatcagcgatcaacagcacgttccaatccaacgtgttggcgctcctcgacgacctcccttccgccgccggccccaccgggttcgcctccctgtcccgcggcgaaggcgccgaccgcgcgttcgtccgcggcatgtgccgcggcgactccacgccggacgactgcgccacctacctccgcagcgccgtgctggacatcaacggccactgcaactccaaccgccgagccgccatctggtacgacaagtgcttcctcagctacgccgacaccaacgcatccaccgcctacgagaacagctaccacgcggagctctacaacgtcaacaacgtcaccgacaaggtcggcttcgagaggacgtactacgcgctgatgagccgcctcagggcgcgggccgcgaacgacacggcgcggatgttcgccgcgggagaggcggtgtacgaccccggcgccgacaacgggacgatgtacgggctggtgcagtgtatgagggaccgcacggcggcggagtgcgaccggtgcttgaacgactcggtgcagcagctgccgagctgctgctggggacaccagggtggggtggtgctcggctacaactgctacgtacgcgtcgaaatatacacctactacgatctcaccgtcgatgcgcagccgccgtctcccggcccgtcggcctccagctcgaagccgtctatcggagaagggcagggaaagaaggggacaaatgtgattgttgccaccacagtttctattggaacaatactactagtggctgtctttattgccgttttcatctacaggagaaagacaacgaagacaatgataccaccagacaacaccggcaatgaggaggacaatgactatgttgacccaccgacccttaacttaacagtgttgagagctgcaacaaggaacttctcggcagaaaataagctgggagaaggaggtttcggagaagtttttaagggtatactagaagacggggaagaaatagcagtgaaaaggctttcgaagacctcctcacaggggttccatgaattgaaaaatgaactcgtgctagctgccaagctcaagcacaaaaatttggtgcggttactaggtgtttgcttgcaggaagaaaaactacttgtgtatgaatacatgcctaatagaagcctagataccatcctttttgagcctgagaaacgacaacaactggattggagaaaaaggtttatgatcatttgtggaattgctcgaggccttctatatctgcatgaagagtctagccagaagatcatacatagggatctgaagccaagcaatgtcctattagatgaggatatgatccccaagatctcagattttggccttgccagggcttttggtggagagcaatcgaaggatgttacaagacgccctatggtgaccggtagaaggagcaatgggatgtatgcttccaccaagtcagatacttatgaatctgccgactccacgtctctactgagctacgtatgggagaaatggaggacacgatccctagctgacgaagtggacgcgtcgttgggtggccgataccctgaaaacgaggtcttcagctgcgtgcagattgggctactgtgtgtccaagagaatccagctgacaggccggacatttcagctgtggtgctaatgctgagcagcaattccacgtcgctgcagactccttctaagccggcgttcttcttcggctctggcagcatcgccagcttggatgctgctggtggacatgcatttttcggtggccgggtttcagaagttgcggccatcagcagtaacaagatgtccagtaaccccatttcagagaatgaggtcacgatttcagagcttcaaccgaggtag
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| Protein seq | MPCPSCRCNSGSIVFLLVEVVAILFTGATSKDTTNPFTSLDCPSPPPSASPSPPSSAINSTFQSNVLALLDDLPSAAGPTGFASLSRGEGADRAFVRGMCRGDSTPDDCATYLRSAVLDINGHCNSNRRAAIWYDKCFLSYADTNASTAYENSYHAELYNVNNVTDKVGFERTYYALMSRLRARAANDTARMFAAGEAVYDPGADNGTMYGLVQCMRDRTAAECDRCLNDSVQQLPSCCWGHQGGVVLGYNCYVRVEIYTYYDLTVDAQPPSPGPSASSSKPSIGEGQGKKGTNVIVATTVSIGTILLVAVFIAVFIYRRKTTKTMIPPDNTGNEEDNDYVDPPTLNLTVLRAATRNFSAENKLGEGGFGEVFKGILEDGEEIAVKRLSKTSSQGFHELKNELVLAAKLKHKNLVRLLGVCLQEEKLLVYEYMPNRSLDTILFEPEKRQQLDWRKRFMIICGIARGLLYLHEESSQKIIHRDLKPSNVLLDEDMIPKISDFGLARAFGGEQSKDVTRRPMVTGRRSNGMYASTKSDTYESADSTSLLSYVWEKWRTRSLADEVDASLGGRYPENEVFSCVQIGLLCVQENPADRPDISAVVLMLSSNSTSLQTPSKPAFFFGSGSIASLDAAGGHAFFGGRVSEVAAISSNKMSSNPISENEVTISELQPR |
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| Function | Cysteine-rich receptor-like protein kinase 6 [UniProtKB/Swiss-Prot:Q0D5R3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0015890 | OsLiXu_Ung0015890.01 | ChrUN-Ctg119 | 185451 | 194779 | + | NAM | ||
| CDS seq | atgccgtgtccgtcctgtcgctgcaacagcggcagcatcgtcttcctcctcgtcgaggtggtggcgatccttttcaccggagcgacgtccaaagacaccacgaatccattcacttcgctcgactgcccctcgccgccaccctcggcttcgccgtcgccaccctcatcagcgatcaacagcacgttccaatccaacgtgttggcgctcctcgacgacctcccttccgccgccggccccaccgggttcgcctccctgtcccgcggcgaaggcgccgaccgcgcgttcgtccgcggcatgtgccgcggcgactccacgccggacgactgcgccacctacctccgcagcgccgtgctggacatcaacggccactgcaactccaaccgccgagccgccatctggtacgacaagtgcttcctcagctacgccgacaccaacgcatccaccgcctacgagaacagctaccacgcggagctctacaacgtcaacaacgtcaccgacaaggtcggcttcgagaggacgtactacgcgctgatgagccgcctcagggcgcgggccgcgaacgacacggcgcggatgttcgccgcgggagaggcggtgtacgaccccggcgccgacaacgggacgatgtacgggctggtgcagtgtatgagggaccgcacggcggcggagtgcgaccggtgcttgaacgactcggtgcagcagctgccgagctgctgctggggacaccagggtggggtggtgctcggctacaactgctacgtacgcgtcgaaatatacacctactacgatctcaccgtcgatgcgcagccgccgtctcccggcccgtcggcctccagctcgaagccgtctatcggagaagggcagggaaagaaggggacaaatgtgattgttgccaccacagtttctattggaacaatactactagtggctgtctttattgccgttttcatctacaggagaaagacaacgaagacaatgataccaccagacaacaccggcaatgaggaggacaatgactatgttgacccaccgacccttaacttaacagtgttgagagctgcaacaaggaacttctcggcagaaaataagctgggagaaggaggtttcggagaagtttttaagggtatactagaagacggggaagaaatagcagtgaaaaggctttcgaagacctcctcacaggggttccatgaattgaaaaatgaactcgtgctagctgccaagctcaagcacaaaaatttggtgcggttactaggtgtttgcttgcaggaagaaaaactacttgtgtatgaatacatgcctaatagaagcctagataccatcctttttgagcctgagaaacgacaacaactggattggagaaaaaggtttatgatcatttgtggaattgctcgaggccttctatatctgcatgaagagtctagccagaagatcatacatagggatctgaagccaagcaatgtcctattagatgaggatatgatccccaagatctcagattttggccttgccagggcttttggtggagagcaatcgaaggatgttacaagacgccctatggtgaccggtagaaggagcaatgggatgtatgcttccaccaagtcagatacttatgaatctgccgactccacgtctctactgagctacgtatgggagaaatggaggacacgatccctagctgacgaagtggacgcgtcgttgggtggccgataccctgaaaacgaggtcttcagctgcgtgcagattgggctactgtgtgtccaagagaatccagctgacaggccggacatttcagctgtggtgctaatgctgagcagcaattccacgtcgctgcagactccttctaagccggcgttcttcttcggctctggcagcatcgccagcttggatgctgctggtggacatgcatttttcggtggccgggtttcagaagttgcggccatcagcagtaacaagatgtccagtaaccccatttcagagaatgaggtcacgatttcagagcttcaaccgaggtag
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| Protein seq | MPCPSCRCNSGSIVFLLVEVVAILFTGATSKDTTNPFTSLDCPSPPPSASPSPPSSAINSTFQSNVLALLDDLPSAAGPTGFASLSRGEGADRAFVRGMCRGDSTPDDCATYLRSAVLDINGHCNSNRRAAIWYDKCFLSYADTNASTAYENSYHAELYNVNNVTDKVGFERTYYALMSRLRARAANDTARMFAAGEAVYDPGADNGTMYGLVQCMRDRTAAECDRCLNDSVQQLPSCCWGHQGGVVLGYNCYVRVEIYTYYDLTVDAQPPSPGPSASSSKPSIGEGQGKKGTNVIVATTVSIGTILLVAVFIAVFIYRRKTTKTMIPPDNTGNEEDNDYVDPPTLNLTVLRAATRNFSAENKLGEGGFGEVFKGILEDGEEIAVKRLSKTSSQGFHELKNELVLAAKLKHKNLVRLLGVCLQEEKLLVYEYMPNRSLDTILFEPEKRQQLDWRKRFMIICGIARGLLYLHEESSQKIIHRDLKPSNVLLDEDMIPKISDFGLARAFGGEQSKDVTRRPMVTGRRSNGMYASTKSDTYESADSTSLLSYVWEKWRTRSLADEVDASLGGRYPENEVFSCVQIGLLCVQENPADRPDISAVVLMLSSNSTSLQTPSKPAFFFGSGSIASLDAAGGHAFFGGRVSEVAAISSNKMSSNPISENEVTISELQPR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0015890 | OsLiXu_Ung0015890.02 | ChrUN-Ctg119 | 185450 | 195009 | + | IsoSeq | ||
| CDS seq | attgctatcgcgtccgagttcagaacacacaaaaacacatgccatgccgtgtccgtcctgtcgctgcaacagcggcagcatcgtcttcctcctcgtcgaggtggtggcgatccttttcaccggagcgacgtccaaagacaccacgaatccattcacttcgctcgactgcccctcgccgccaccctcggcttcgccgtcgccaccctcatcagcgatcaacagcacgttccaatccaacgtgttggcgctcctcgacgacctcccttccgccgccggccccaccgggttcgcctccctgtcccgcggcgaaggcgccgaccgcgcgttcgtccgcggcatgtgccgcggcgactccacgccggacgactgcgccacctacctccgcagcgccgtgctggacatcaacggccactgcaactccaaccgccgagccgccatctggtacgacaagtgcttcctcagctacgccgacaccaacgcatccaccgcctacgagaacagctaccacgcggagctctacaacgtcaacaacgtcaccgacaaggtcggcttcgagaggacgtactacgcgctgatgagccgcctcagggcgcgggccgcgaacgacacggcgcggatgttcgccgcgggagaggcggtgtacgaccccggcgccgacaacgggacgatgtacgggctggtgcagtgtatgagggaccgcacggcggcggagtgcgaccggtgcttgaacgactcggtgcagcagctgccgagctgctgctggggacaccagggtggggtggtgctcggctacaactgctacgtacgcgtcgaaatatacacctactacgatctcaccgtcgatgcgcagccgccgtctcccggcccgtcggcctccagctcgaagccgtctatcggagaagggcagggaaagaaggggacaaatgtgattgttgccaccacagtttctattggaacaatactactagtggctgtctttattgccgttttcatctacaggagaaagacaacgaagacaatgataccaccagacaacaccgg
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| Protein seq | IAIASEFRTHKNTCHAVSVLSLQQRQHRLPPRRGGGDPFHRSDVQRHHESIHFARLPLAATLGFAVATLISDQQHVPIQRVGAPRRPPFRRRPHRVRLPVPRRRRRPRVRPRHVPRRLHAGRLRHLPPQRRAGHQRPLQLQPPSRHLVRQVLPQLRRHQRIHRLREQLPRGALQRQQRHRQGRLREDVLRADEPPQGAGRERHGADVRRGRGGVRPRRRQRDDVRAGAVYEGPHGGGVRPVLERLGAAAAELLLGTPGWGGARLQLLRTRRNIHLLRSHRRCAAAVSRPVGLQLEAVYRRRAGKEGDKCDCCHHSFYWNNTTSGCLYCRFHLQEKDNEDNDTTRQHR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.867756 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0197100 | RBH | 0.268585 | 0.825410 | 0.656454 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g12080 | SBH | 0.828382 | 0.248131 | 0.263559 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0197100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0003920 | RBH | 0.0 | 0.000000 | 0.580739 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0004440 | RBH | 0.0 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0003950 | RBH | 0.606579 | 0.0 | 1.128833 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0003930 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0097600 | RBH | 0.018117 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0004070 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0003950 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0003990 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0003850 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G004190 | RBH | 0.0 | 0.378157 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0003920 | RBH | 0.0 | 0.0 | 0.000000 |
