Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_Ung0012630 | OGI:99022420 | 1/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | ChrUN-Ctg94:740028-742493 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | gcttctctctgcatacaagaggaggtctctccttcttcagtgactccctcaagatcttgcccaaacttgctgagatctggtgagtgccttctcacggtcctgtggatcatttgtggtttagttcgtagtttgttgtgtgatcttgcaaactcttgatctagtagctgtgttcgtttttgatttctctgaagatattagctttgctgtgttcggatctgggagatggagatggagatctcattttcctctcaccccctttctggatcacggtttctcacttttgccgcttaaaatcgcgattttgctcgcaaatttacttcctttatgcaaaaaaaatcatgttaaagagttggtcgcggcaatggatggatctcgcccgcccctgtctatgatctgatactcttccccaaaacctcgaaatgtttccatctcgattctattgggcgcccccattttcccgtgtttcttgcgagatcccggttcgtcagctcgtgatccgcgaaccccgatttgctagtgttgacttggtagcaatccgtttcatcactccattcagtttgctaatactaataaaaattgtaatattttttttccagtaagagcagtaggcgaagatggtgaagatctgctgcatcggagctgggtacgtgggcgggccgaccatggcggtgattgccctcaagtgtccggcgatcgaggtggtggtcgtcgacatctccaagccgcgcatcgacgcctggaacagcgagcagctgccgatctacgagccggggctcgacgaagtggtcaaggagtgcaggggcaggaacctcttcttcagcacggacgtcgagaagcacgtcgcggaggcggacatcatcttcgtgtccgtgaacacgccgaccaagacgcgcggcctcggcgccggcaaggcggccgacctcacctactgggagagcgcggcgaggatgatcgccgacgtgtccaagtccgacaagatcgtcgtcgagaagtccaccgtgccggtcaagacggccgaggcgatcgagaagatcctgacgcacaacagcaagggcatcaactaccagatcctctccaacccggagttcctcgccgagggcaccgccattgacgacctgttcaagcccgaccgcgtcctcatcggcggccgcgagacggcggaggggaggaaggccgtgcaggcgctcaagtcggtgtacgcgcactgggtgcccgaggacaggatcatcaccaccaacctctggtccgccgagctctccaagctcgccgcgaacgcgttcctggcgcagaggatctcgtcggtgaacgccatctcggcgctctgcgaggccaccggcgcgaacgtcaccgaggtggcgtacgccgtcggcaaggactcgaggattggccccaaattcctcaacgccagcgttggattcggcggctcctgcttccagaaggacatcctgaatctggtgtacatctgcgaatgcaatggcctccccgaggttgctaactactggaagcaggtgatcaagatcaacgactaccagaagagccggttcgtgaaccgggtggtgtcgtccatgttcaacacggtgtcgggcaagaagatcgccgtgctggggttcgcgttcaagaaggacaccggcgacacgagggagacgccggcgatcgacgtgtgccacggcctgctcggcgacaaggcgcagatcagcatctacgacccgcaggtgacggaggaccagatccagcgggacctcgccatgggcaagttcgactgggaccacccgatgcacctgcagccgacgagccccacggcgttcaagcaggtgagcgtggtgtgggacgcgtacgaggccaccaagaacgcccatggcctctgcatcctcaccgagtgggacgagttcaagacgctcgactaccagaagatctacgacaacatgcagaagccggcgttcgtcttcgacggccgcaacgtcgtcgacccggagaagctcagggagatcggcttcatcgtctactccatcggcaagccgctcgacgcctggctcaaggacatgcccgccgtggcatgataagatttatgtgaattttaatcgatcgattcgattctcaacctcgattcgagctgcaggaattcgacttggaagaagagcaatgcaagatgggttggccacttaaaattctttatagttcgttttttttttttgcaggagacgacactaccattttctcaggcataaaaaagttgggtgttcttgttagtaaaatcatcgtcatcgctgttgaagttttttttttccatcgtttgcactgttctagatcactataatccccccccccccccctccccctccccctgtcatcttggctcttgctgtttgagggccatctgaacgaaaatttacctgtattattcagtcaacttgttatagcagattggttattccattgtactattctcaaatatatctcttgctgcaa
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| CDS seq | atggtgaagatctgctgcatcggagctgggtacgtgggcgggccgaccatggcggtgattgccctcaagtgtccggcgatcgaggtggtggtcgtcgacatctccaagccgcgcatcgacgcctggaacagcgagcagctgccgatctacgagccggggctcgacgaagtggtcaaggagtgcaggggcaggaacctcttcttcagcacggacgtcgagaagcacgtcgcggaggcggacatcatcttcgtgtccgtgaacacgccgaccaagacgcgcggcctcggcgccggcaaggcggccgacctcacctactgggagagcgcggcgaggatgatcgccgacgtgtccaagtccgacaagatcgtcgtcgagaagtccaccgtgccggtcaagacggccgaggcgatcgagaagatcctgacgcacaacagcaagggcatcaactaccagatcctctccaacccggagttcctcgccgagggcaccgccattgacgacctgttcaagcccgaccgcgtcctcatcggcggccgcgagacggcggaggggaggaaggccgtgcaggcgctcaagtcggtgtacgcgcactgggtgcccgaggacaggatcatcaccaccaacctctggtccgccgagctctccaagctcgccgcgaacgcgttcctggcgcagaggatctcgtcggtgaacgccatctcggcgctctgcgaggccaccggcgcgaacgtcaccgaggtggcgtacgccgtcggcaaggactcgaggattggccccaaattcctcaacgccagcgttggattcggcggctcctgcttccagaaggacatcctgaatctggtgtacatctgcgaatgcaatggcctccccgaggttgctaactactggaagcaggtgatcaagatcaacgactaccagaagagccggttcgtgaaccgggtggtgtcgtccatgttcaacacggtgtcgggcaagaagatcgccgtgctggggttcgcgttcaagaaggacaccggcgacacgagggagacgccggcgatcgacgtgtgccacggcctgctcggcgacaaggcgcagatcagcatctacgacccgcaggtgacggaggaccagatccagcgggacctcgccatgggcaagttcgactgggaccacccgatgcacctgcagccgacgagccccacggcgttcaagcaggtgagcgtggtgtgggacgcgtacgaggccaccaagaacgcccatggcctctgcatcctcaccgagtgggacgagttcaagacgctcgactaccagaagatctacgacaacatgcagaagccggcgttcgtcttcgacggccgcaacgtcgtcgacccggagaagctcagggagatcggcttcatcgtctactccatcggcaagccgctcgacgcctggctcaaggacatgcccgccgtggcatga
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| Protein seq | MVKICCIGAGYVGGPTMAVIALKCPAIEVVVVDISKPRIDAWNSEQLPIYEPGLDEVVKECRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGINYQILSNPEFLAEGTAIDDLFKPDRVLIGGRETAEGRKAVQALKSVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRISSVNAISALCEATGANVTEVAYAVGKDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIKINDYQKSRFVNRVVSSMFNTVSGKKIAVLGFAFKKDTGDTRETPAIDVCHGLLGDKAQISIYDPQVTEDQIQRDLAMGKFDWDHPMHLQPTSPTAFKQVSVVWDAYEATKNAHGLCILTEWDEFKTLDYQKIYDNMQKPAFVFDGRNVVDPEKLREIGFIVYSIGKPLDAWLKDMPAVA |
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| Function | UDP-glucose 6-dehydrogenase 3 [UniProtKB/Swiss-Prot:Q9AUV6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0012630 | OsLiXu_Ung0012630.02 | ChrUN-Ctg94 | 740189 | 742493 | + | NAM | ||
| CDS seq | atggtgaagatctgctgcatcggagctgggtacgtgggcgggccgaccatggcggtgattgccctcaagtgtccggcgatcgaggtggtggtcgtcgacatctccaagccgcgcatcgacgcctggaacagcgagcagctgccgatctacgagccggggctcgacgaagtggtcaaggagtgcaggggcaggaacctcttcttcagcacggacgtcgagaagcacgtcgcggaggcggacatcatcttcgtgtccgtgaacacgccgaccaagacgcgcggcctcggcgccggcaaggcggccgacctcacctactgggagagcgcggcgaggatgatcgccgacgtgtccaagtccgacaagatcgtcgtcgagaagtccaccgtgccggtcaagacggccgaggcgatcgagaagatcctgacgcacaacagcaagggcatcaactaccagatcctctccaacccggagttcctcgccgagggcaccgccattgacgacctgttcaagcccgaccgcgtcctcatcggcggccgcgagacggcggaggggaggaaggccgtgcaggcgctcaagtcggtgtacgcgcactgggtgcccgaggacaggatcatcaccaccaacctctggtccgccgagctctccaagctcgccgcgaacgcgttcctggcgcagaggatctcgtcggtgaacgccatctcggcgctctgcgaggccaccggcgcgaacgtcaccgaggtggcgtacgccgtcggcaaggactcgaggattggccccaaattcctcaacgccagcgttggattcggcggctcctgcttccagaaggacatcctgaatctggtgtacatctgcgaatgcaatggcctccccgaggttgctaactactggaagcaggtgatcaagatcaacgactaccagaagagccggttcgtgaaccgggtggtgtcgtccatgttcaacacggtgtcgggcaagaagatcgccgtgctggggttcgcgttcaagaaggacaccggcgacacgagggagacgccggcgatcgacgtgtgccacggcctgctcggcgacaaggcgcagatcagcatctacgacccgcaggtgacggaggaccagatccagcgggacctcgccatgggcaagttcgactgggaccacccgatgcacctgcagccgacgagccccacggcgttcaagcaggtgagcgtggtgtgggacgcgtacgaggccaccaagaacgcccatggcctctgcatcctcaccgagtgggacgagttcaagacgctcgactaccagaagatctacgacaacatgcagaagccggcgttcgtcttcgacggccgcaacgtcgtcgacccggagaagctcagggagatcggcttcatcgtctactccatcggcaagccgctcgacgcctggctcaaggacatgcccgccgtggcatga
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| Protein seq | MVKICCIGAGYVGGPTMAVIALKCPAIEVVVVDISKPRIDAWNSEQLPIYEPGLDEVVKECRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGINYQILSNPEFLAEGTAIDDLFKPDRVLIGGRETAEGRKAVQALKSVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRISSVNAISALCEATGANVTEVAYAVGKDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIKINDYQKSRFVNRVVSSMFNTVSGKKIAVLGFAFKKDTGDTRETPAIDVCHGLLGDKAQISIYDPQVTEDQIQRDLAMGKFDWDHPMHLQPTSPTAFKQVSVVWDAYEATKNAHGLCILTEWDEFKTLDYQKIYDNMQKPAFVFDGRNVVDPEKLREIGFIVYSIGKPLDAWLKDMPAVA
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0012630 | OsLiXu_Ung0012630.01 | ChrUN-Ctg94 | 740028 | 742084 | + | NAM | ||
| CDS seq | atggtgaagatctgctgcatcggagctgggtacgtgggcgggccgaccatggcggtgattgccctcaagtgtccggcgatcgaggtggtggtcgtcgacatctccaagccgcgcatcgacgcctggaacagcgagcagctgccgatctacgagccggggctcgacgaagtggtcaaggagtgcaggggcaggaacctcttcttcagcacggacgtcgagaagcacgtcgcggaggcggacatcatcttcgtgtccgtgaacacgccgaccaagacgcgcggcctcggcgccggcaaggcggccgacctcacctactgggagagcgcggcgaggatgatcgccgacgtgtccaagtccgacaagatcgtcgtcgagaagtccaccgtgccggtcaagacggccgaggcgatcgagaagatcctgacgcacaacagcaagggcatcaactaccagatcctctccaacccggagttcctcgccgagggcaccgccattgacgacctgttcaagcccgaccgcgtcctcatcggcggccgcgagacggcggaggggaggaaggccgtgcaggcgctcaagtcggtgtacgcgcactgggtgcccgaggacaggatcatcaccaccaacctctggtccgccgagctctccaagctcgccgcgaacgcgttcctggcgcagaggatctcgtcggtgaacgccatctcggcgctctgcgaggccaccggcgcgaacgtcaccgaggtggcgtacgccgtcggcaaggactcgaggattggccccaaattcctcaacgccagcgttggattcggcggctcctgcttccagaaggacatcctgaatctggtgtacatctgcgaatgcaatggcctccccgaggttgctaactactggaagcaggtgatcaagatcaacgactaccagaagagccggttcgtgaaccgggtggtgtcgtccatgttcaacacggtgtcgggcaagaagatcgccgtgctggggttcgcgttcaagaaggacaccggcgacacgagggagacgccggcgatcgacgtgtgccacggcctgctcggcgacaaggcgcagatcagcatctacgacccgcaggtgacggaggaccagatccagcgggacctcgccatgggcaagttcgactgggaccacccgatgcacctgcagccgacgagccccacggcgttcaagcaggtgagcgtggtgtgggacgcgtacgaggccaccaagaacgcccatggcctctgcatcctcaccgagtgggacgagttcaagacgctcgactaccagaagatctacgacaacatgcagaagccggcgttcgtcttcgacggccgcaacgtcgtcgacccggagaagctcagggagatcggcttcatcgtctactccatcggcaagccgctcgacgcctggctcaaggacatgcccgccgtggcatga
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| Protein seq | MVKICCIGAGYVGGPTMAVIALKCPAIEVVVVDISKPRIDAWNSEQLPIYEPGLDEVVKECRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGINYQILSNPEFLAEGTAIDDLFKPDRVLIGGRETAEGRKAVQALKSVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRISSVNAISALCEATGANVTEVAYAVGKDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIKINDYQKSRFVNRVVSSMFNTVSGKKIAVLGFAFKKDTGDTRETPAIDVCHGLLGDKAQISIYDPQVTEDQIQRDLAMGKFDWDHPMHLQPTSPTAFKQVSVVWDAYEATKNAHGLCILTEWDEFKTLDYQKIYDNMQKPAFVFDGRNVVDPEKLREIGFIVYSIGKPLDAWLKDMPAVA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| AF | ChrUN-Ctg94 | 740028 | 740624 | + | OsLiXu_Ung0012630.01 | OsLiXu_Ung0012630.01,OsLiXu_Ung0012630.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.531684 | 0.0 | 5.582550 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0757900 | SBH | 12.131588 | 7.615557 | 24.160583 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g55070 | SBH | 7.850152 | 4.985518 | 6.025093 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0757900 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0035400 | SBH | 0.976621 | 123.699905 | 80.885193 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0035070 | SBH | 0.408641 | 58.369762 | 12.916492 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0035160 | SBH | 3.292455 | 216.116882 | 87.073273 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0035460 | SBH | 0.202810 | 11.499921 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0034980 | SBH | 4.631662 | 474.551819 | 58.950367 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0210100 | SBH | 23.208069 | 31.929609 | 6.4178105 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0034770 | SBH | 0.309684 | 22.858887 | 3.163684 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0235000 | SBH | 26.96451 | 12.590381 | 16.930622 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0035240 | SBH | 0.418480 | 1.891595 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0035270 | SBH | 1.098512 | 216.567169 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0034930 | SBH | 6.342798 | 193.203751 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0035000 | RBH | 0.000000 | 3.177360 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0034960 | SBH | 0.598864 | 173.621338 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G034760 | SBH | 0.191602 | 157.118561 | 38.450188 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0034600 | SBH | 1.381253 | 191.383392 | 36.909760 |
