Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsIR64_03g0034770 OGI:03087860 | 14/16 IR 64 | OsIR64RS1 | Gramene(+IsoSeq) Chr03:33793695-33796275
Gene Symbol -
DNA seq

GTAAAATTTCTCGAGTGGGGAGGGGTAGATCCAATTCAGACCCAATTCGGTGGCTTCAGTGGTGAAGCCAATATAAGGGGGGCAGTCTCCCCTCTGAACACACACAACTTGTAGGCAGCTTCTCTCTGCATACAAGAGGAGGTCTCTCCTTCTTCAGTGACTCCCTCAAGATCTTGCCCAAACTTGCTGAGATCTGGTGAGTGCCTTCTCACGGTCCTGTGGATCATTTGTGGTTTAGTTCGTAGTTTGTTGTGTGATCTTGCAAACTCTTGATCTAGTAGCTGTGTTCGTTTTTGATTTCTCTGAAGATATTAGCTTTGCTGTGTTCGGATCTGGGAGATGGAGATGGAGATCTCATTTTCCTCTCACCCCCTTTCTGGATCACGGTTTCTCACTTTTGCCGCTTAAAATCGCGATTTTGCTCGCAAATTTACTTCCTTTATGCAAAAAAAATCATGTTAAAGAGTTGGTCGCGGCAATGGATGGATCTCGCCCGCCCCTGTCTATGATCTGATACTCTTCCCCAAAACCTCGAAATGTTTCCATCTCGATTCTATTGGGCGCCCCCATTTTCCCGTGTTTCTTGCGAGATCCCGGTTCGTCAGCTCGTGATCCGCGAACCCCGATTTGCTAGTGTTGACTTGGTAGCAATCCGTTTCATCACTCCATTCAGTTTGCTAATACTAATAAAAATTGTAATATTTTTTTTCCAGTAAGAGCAGTAGGCGAAGATGGTGAAGATCTGCTGCATCGGAGCTGGGTACGTGGGCGGGCCGACCATGGCGGTGATTGCCCTCAAGTGTCCGGCGATCGAGGTGGTGGTCGTCGACATCTCCAAGCCGCGCATCGACGCCTGGAACAGCGAGCAGCTGCCGATCTACGAGCCGGGGCTCGACGAAGTGGTCAAGGAGTGCAGGGGCAGGAACCTCTTCTTCAGCACGGACGTCGAGAAGCACGTCGCGGAGGCGGACATCATCTTCGTGTCCGTGAACACGCCGACCAAGACGCGCGGCCTCGGCGCCGGCAAGGCGGCCGACCTCACCTACTGGGAGAGCGCGGCGAGGATGATCGCCGACGTGTCCAAGTCCGACAAGATCGTCGTCGAGAAGTCCACCGTGCCGGTCAAGACGGCCGAGGCGATCGAGAAGATCCTGACGCACAACAGCAAGGGCATCAACTACCAGATCCTCTCCAACCCGGAGTTCCTCGCCGAGGGCACCGCCATTGACGACCTGTTCAAGCCCGACCGCGTCCTCATCGGCGGCCGCGAGACGGCGGAGGGGAGGAAGGCCGTGCAGGCGCTCAAGTCGGTGTACGCGCACTGGGTGCCCGAGGACAGGATCATCACCACCAACCTCTGGTCCGCCGAGCTCTCCAAGCTCGCCGCGAACGCGTTCCTGGCGCAGAGGATCTCGTCGGTGAACGCCATCTCGGCGCTCTGCGAGGCCACCGGCGCGAACGTCACCGAGGTGGCGTACGCCGTCGGCAAGGACTCGAGGATTGGCCCCAAATTCCTCAACGCCAGCGTTGGATTCGGCGGCTCCTGCTTCCAGAAGGACATCCTGAATCTGGTGTACATCTGCGAATGCAATGGCCTCCCCGAGGTTGCTAACTACTGGAAGCAGGTGATCAAGATCAACGACTACCAGAAGAGCCGGTTCGTGAACCGGGTGGTGTCGTCCATGTTCAACACGGTGTCGGGCAAGAAGATCGCCGTGCTGGGGTTCGCGTTCAAGAAGGACACCGGCGACACGAGGGAGACGCCGGCGATCGACGTGTGCCACGGCCTGCTCGGCGACAAGGCGCAGATCAGCATCTACGACCCGCAGGTGACGGAGGACCAGATCCAGCGGGACCTCGCCATGGGCAAGTTCGACTGGGACCACCCGATGCACCTGCAGCCGACGAGCCCCACGGCGTTCAAGCAGGTGAGCGTGGTGTGGGACGCGTACGAGGCCACCAAGAACGCCCATGGCCTCTGCATCCTCACCGAGTGGGACGAGTTCAAGACGCTCGACTACCAGAAGATCTACGACAACATGCAGAAGCCGGCGTTCGTCTTCGACGGCCGCAACGTCGTCGACCCGGAGAAGCTCAGGGAGATCGGCTTCATCGTCTACTCCATCGGCAAGCCGCTCGACGCCTGGCTCAAGGACATGCCCGCCGTGGCATGATAAGATTTATGTGAATTTTAATCGATCGATTCGATTCTCAACCTCGATTCGAGCTGCAGGAATTCGACTTGGAAGAAGAGCAATGCAAGATGGGTTGGCCACTTAAAATTCTTTATAGTTCGTTTTTTTTTTTGCAGGAGACGACACTACCATTTTCTCAGGCATAAAAAAGTTGGGTGTTCTTGTTAGTAAAATCATCGTCATCGCTGTTGAAGTTTTTTTTTTCCATCGTTTGCACTGTTCTAGATCACTATAATCCCCCCCCCCCCCCTCCCCCTCCCCCTGTCATCTTGGCTCTTGCTGTTTGAGGGCCATCTGAACGAAAATTTACCTGTATTATTCAGTCAACTTGTTATAGCAGATTGGTTATTCCATTGTACTATTCTCAAATATATCTCTTGCTGCAA

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CDS seq

ATGGTGAAGATCTGCTGCATCGGAGCTGGGTACGTGGGCGGGCCGACCATGGCGGTGATTGCCCTCAAGTGTCCGGCGATCGAGGTGGTGGTCGTCGACATCTCCAAGCCGCGCATCGACGCCTGGAACAGCGAGCAGCTGCCGATCTACGAGCCGGGGCTCGACGAAGTGGTCAAGGAGTGCAGGGGCAGGAACCTCTTCTTCAGCACGGACGTCGAGAAGCACGTCGCGGAGGCGGACATCATCTTCGTGTCCGTGAACACGCCGACCAAGACGCGCGGCCTCGGCGCCGGCAAGGCGGCCGACCTCACCTACTGGGAGAGCGCGGCGAGGATGATCGCCGACGTGTCCAAGTCCGACAAGATCGTCGTCGAGAAGTCCACCGTGCCGGTCAAGACGGCCGAGGCGATCGAGAAGATCCTGACGCACAACAGCAAGGGCATCAACTACCAGATCCTCTCCAACCCGGAGTTCCTCGCCGAGGGCACCGCCATTGACGACCTGTTCAAGCCCGACCGCGTCCTCATCGGCGGCCGCGAGACGGCGGAGGGGAGGAAGGCCGTGCAGGCGCTCAAGTCGGTGTACGCGCACTGGGTGCCCGAGGACAGGATCATCACCACCAACCTCTGGTCCGCCGAGCTCTCCAAGCTCGCCGCGAACGCGTTCCTGGCGCAGAGGATCTCGTCGGTGAACGCCATCTCGGCGCTCTGCGAGGCCACCGGCGCGAACGTCACCGAGGTGGCGTACGCCGTCGGCAAGGACTCGAGGATTGGCCCCAAATTCCTCAACGCCAGCGTTGGATTCGGCGGCTCCTGCTTCCAGAAGGACATCCTGAATCTGGTGTACATCTGCGAATGCAATGGCCTCCCCGAGGTTGCTAACTACTGGAAGCAGGTGATCAAGATCAACGACTACCAGAAGAGCCGGTTCGTGAACCGGGTGGTGTCGTCCATGTTCAACACGGTGTCGGGCAAGAAGATCGCCGTGCTGGGGTTCGCGTTCAAGAAGGACACCGGCGACACGAGGGAGACGCCGGCGATCGACGTGTGCCACGGCCTGCTCGGCGACAAGGCGCAGATCAGCATCTACGACCCGCAGGTGACGGAGGACCAGATCCAGCGGGACCTCGCCATGGGCAAGTTCGACTGGGACCACCCGATGCACCTGCAGCCGACGAGCCCCACGGCGTTCAAGCAGGTGAGCGTGGTGTGGGACGCGTACGAGGCCACCAAGAACGCCCATGGCCTCTGCATCCTCACCGAGTGGGACGAGTTCAAGACGCTCGACTACCAGAAGATCTACGACAACATGCAGAAGCCGGCGTTCGTCTTCGACGGCCGCAACGTCGTCGACCCGGAGAAGCTCAGGGAGATCGGCTTCATCGTCTACTCCATCGGCAAGCCGCTCGACGCCTGGCTCAAGGACATGCCCGCCGTGGCATGA

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Protein seq

MVKICCIGAGYVGGPTMAVIALKCPAIEVVVVDISKPRIDAWNSEQLPIYEPGLDEVVKECRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGINYQILSNPEFLAEGTAIDDLFKPDRVLIGGRETAEGRKAVQALKSVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRISSVNAISALCEATGANVTEVAYAVGKDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIKINDYQKSRFVNRVVSSMFNTVSGKKIAVLGFAFKKDTGDTRETPAIDVCHGLLGDKAQISIYDPQVTEDQIQRDLAMGKFDWDHPMHLQPTSPTAFKQVSVVWDAYEATKNAHGLCILTEWDEFKTLDYQKIYDNMQKPAFVFDGRNVVDPEKLREIGFIVYSIGKPLDAWLKDMPAVA

Function UDP-glucose 6-dehydrogenase 3 [UniProtKB/Swiss-Prot:Q9AUV6]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsIR64_03g0034770 OsIR64_03g0034770.01 Chr03 33793695 33796275 + NAM
CDS seq

ATGGTGAAGATCTGCTGCATCGGAGCTGGGTACGTGGGCGGGCCGACCATGGCGGTGATTGCCCTCAAGTGTCCGGCGATCGAGGTGGTGGTCGTCGACATCTCCAAGCCGCGCATCGACGCCTGGAACAGCGAGCAGCTGCCGATCTACGAGCCGGGGCTCGACGAAGTGGTCAAGGAGTGCAGGGGCAGGAACCTCTTCTTCAGCACGGACGTCGAGAAGCACGTCGCGGAGGCGGACATCATCTTCGTGTCCGTGAACACGCCGACCAAGACGCGCGGCCTCGGCGCCGGCAAGGCGGCCGACCTCACCTACTGGGAGAGCGCGGCGAGGATGATCGCCGACGTGTCCAAGTCCGACAAGATCGTCGTCGAGAAGTCCACCGTGCCGGTCAAGACGGCCGAGGCGATCGAGAAGATCCTGACGCACAACAGCAAGGGCATCAACTACCAGATCCTCTCCAACCCGGAGTTCCTCGCCGAGGGCACCGCCATTGACGACCTGTTCAAGCCCGACCGCGTCCTCATCGGCGGCCGCGAGACGGCGGAGGGGAGGAAGGCCGTGCAGGCGCTCAAGTCGGTGTACGCGCACTGGGTGCCCGAGGACAGGATCATCACCACCAACCTCTGGTCCGCCGAGCTCTCCAAGCTCGCCGCGAACGCGTTCCTGGCGCAGAGGATCTCGTCGGTGAACGCCATCTCGGCGCTCTGCGAGGCCACCGGCGCGAACGTCACCGAGGTGGCGTACGCCGTCGGCAAGGACTCGAGGATTGGCCCCAAATTCCTCAACGCCAGCGTTGGATTCGGCGGCTCCTGCTTCCAGAAGGACATCCTGAATCTGGTGTACATCTGCGAATGCAATGGCCTCCCCGAGGTTGCTAACTACTGGAAGCAGGTGATCAAGATCAACGACTACCAGAAGAGCCGGTTCGTGAACCGGGTGGTGTCGTCCATGTTCAACACGGTGTCGGGCAAGAAGATCGCCGTGCTGGGGTTCGCGTTCAAGAAGGACACCGGCGACACGAGGGAGACGCCGGCGATCGACGTGTGCCACGGCCTGCTCGGCGACAAGGCGCAGATCAGCATCTACGACCCGCAGGTGACGGAGGACCAGATCCAGCGGGACCTCGCCATGGGCAAGTTCGACTGGGACCACCCGATGCACCTGCAGCCGACGAGCCCCACGGCGTTCAAGCAGGTGAGCGTGGTGTGGGACGCGTACGAGGCCACCAAGAACGCCCATGGCCTCTGCATCCTCACCGAGTGGGACGAGTTCAAGACGCTCGACTACCAGAAGATCTACGACAACATGCAGAAGCCGGCGTTCGTCTTCGACGGCCGCAACGTCGTCGACCCGGAGAAGCTCAGGGAGATCGGCTTCATCGTCTACTCCATCGGCAAGCCGCTCGACGCCTGGCTCAAGGACATGCCCGCCGTGGCATGA

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Protein seq

MVKICCIGAGYVGGPTMAVIALKCPAIEVVVVDISKPRIDAWNSEQLPIYEPGLDEVVKECRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGINYQILSNPEFLAEGTAIDDLFKPDRVLIGGRETAEGRKAVQALKSVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRISSVNAISALCEATGANVTEVAYAVGKDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIKINDYQKSRFVNRVVSSMFNTVSGKKIAVLGFAFKKDTGDTRETPAIDVCHGLLGDKAQISIYDPQVTEDQIQRDLAMGKFDWDHPMHLQPTSPTAFKQVSVVWDAYEATKNAHGLCILTEWDEFKTLDYQKIYDNMQKPAFVFDGRNVVDPEKLREIGFIVYSIGKPLDAWLKDMPAVA

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Gene Transcript Chromosome Start End Strand Source
OsIR64_03g0034770 OsIR64_03g0034770.02 Chr03 33793973 33796275 + NAM
CDS seq

ATGGTGAAGATCTGCTGCATCGGAGCTGGGTACGTGGGCGGGCCGACCATGGCGGTGATTGCCCTCAAGTGTCCGGCGATCGAGGTGGTGGTCGTCGACATCTCCAAGCCGCGCATCGACGCCTGGAACAGCGAGCAGCTGCCGATCTACGAGCCGGGGCTCGACGAAGTGGTCAAGGAGTGCAGGGGCAGGAACCTCTTCTTCAGCACGGACGTCGAGAAGCACGTCGCGGAGGCGGACATCATCTTCGTGTCCGTGAACACGCCGACCAAGACGCGCGGCCTCGGCGCCGGCAAGGCGGCCGACCTCACCTACTGGGAGAGCGCGGCGAGGATGATCGCCGACGTGTCCAAGTCCGACAAGATCGTCGTCGAGAAGTCCACCGTGCCGGTCAAGACGGCCGAGGCGATCGAGAAGATCCTGACGCACAACAGCAAGGGCATCAACTACCAGATCCTCTCCAACCCGGAGTTCCTCGCCGAGGGCACCGCCATTGACGACCTGTTCAAGCCCGACCGCGTCCTCATCGGCGGCCGCGAGACGGCGGAGGGGAGGAAGGCCGTGCAGGCGCTCAAGTCGGTGTACGCGCACTGGGTGCCCGAGGACAGGATCATCACCACCAACCTCTGGTCCGCCGAGCTCTCCAAGCTCGCCGCGAACGCGTTCCTGGCGCAGAGGATCTCGTCGGTGAACGCCATCTCGGCGCTCTGCGAGGCCACCGGCGCGAACGTCACCGAGGTGGCGTACGCCGTCGGCAAGGACTCGAGGATTGGCCCCAAATTCCTCAACGCCAGCGTTGGATTCGGCGGCTCCTGCTTCCAGAAGGACATCCTGAATCTGGTGTACATCTGCGAATGCAATGGCCTCCCCGAGGTTGCTAACTACTGGAAGCAGGTGATCAAGATCAACGACTACCAGAAGAGCCGGTTCGTGAACCGGGTGGTGTCGTCCATGTTCAACACGGTGTCGGGCAAGAAGATCGCCGTGCTGGGGTTCGCGTTCAAGAAGGACACCGGCGACACGAGGGAGACGCCGGCGATCGACGTGTGCCACGGCCTGCTCGGCGACAAGGCGCAGATCAGCATCTACGACCCGCAGGTGACGGAGGACCAGATCCAGCGGGACCTCGCCATGGGCAAGTTCGACTGGGACCACCCGATGCACCTGCAGCCGACGAGCCCCACGGCGTTCAAGCAGGTGAGCGTGGTGTGGGACGCGTACGAGGCCACCAAGAACGCCCATGGCCTCTGCATCCTCACCGAGTGGGACGAGTTCAAGACGCTCGACTACCAGAAGATCTACGACAACATGCAGAAGCCGGCGTTCGTCTTCGACGGCCGCAACGTCGTCGACCCGGAGAAGCTCAGGGAGATCGGCTTCATCGTCTACTCCATCGGCAAGCCGCTCGACGCCTGGCTCAAGGACATGCCCGCCGTGGCATGA

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Protein seq

MVKICCIGAGYVGGPTMAVIALKCPAIEVVVVDISKPRIDAWNSEQLPIYEPGLDEVVKECRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGINYQILSNPEFLAEGTAIDDLFKPDRVLIGGRETAEGRKAVQALKSVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRISSVNAISALCEATGANVTEVAYAVGKDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIKINDYQKSRFVNRVVSSMFNTVSGKKIAVLGFAFKKDTGDTRETPAIDVCHGLLGDKAQISIYDPQVTEDQIQRDLAMGKFDWDHPMHLQPTSPTAFKQVSVVWDAYEATKNAHGLCILTEWDEFKTLDYQKIYDNMQKPAFVFDGRNVVDPEKLREIGFIVYSIGKPLDAWLKDMPAVA

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OsIR64_03g0034770.02OsIR64_03g0034770.01AS33793595 bp33794000 bp33794500 bp33795000 bp33795500 bp33796000 bp33796500 bpAll AS eventsIsoSeq based ASRoot based ASLeaf based ASPanicle based AS
Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source
AF Chr03 33793695 33794408 + OsIR64_03g0034770.01 OsIR64_03g0034770.02,OsIR64_03g0034770.01 All

Expression

Leaf Root Panicle
FPKM 0.309684 22.858887 3.163684

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_03g0757900 RBH 12.131588 7.615557 24.160583
Nipponbare | IRGSP 1.0 | MSU LOC_Os03g55070 RBH 7.850152 4.985518 6.025093
Nipponbare | IRGSP 1.0 | RAP-db Os03g0757900 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_03g0035400 RBH 0.976621 123.699905 80.885193
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_03g0035070 RBH 0.408641 58.369762 12.916492
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_03g0035160 RBH 3.292455 216.116882 87.073273
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_03g0035460 RBH 0.202810 11.499921 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_03g0034980 RBH 4.631662 474.551819 58.950367
Minghui 63 | MH63RS3 | HZAU OsMH63_12G0210100 SBH 23.208069 31.929609 6.4178105
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_12g0011750 RBH 0.250234 20.105383 1.792230
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_12G0235000 SBH 26.96451 12.590381 16.930622
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_03g0035240 RBH 0.418480 1.891595 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_03g0035270 RBH 1.098512 216.567169 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_03g0034930 RBH 6.342798 193.203751 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_03g0035000 RBH 0.000000 3.177360 0.000000
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_03g0034960 RBH 0.598864 173.621338 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_03G034760 RBH 0.191602 157.118561 38.450188
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_03g0034600 RBH 1.381253 191.383392 36.909760
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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