Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsLiXu_11g0019530 | OGI:11067860 | 15/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr11:26627927-26631779 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | gaacatgcagcctgcaacaacatgactatactcgcataattgtgtttgaacgaaaacatggacacagaaatagaacttacagatacaagtggccaacagcaactacacacagaaattacagatacaaactttttagataatgtacagatacaaactggccaacggcaatacagaagcgaccatgagatgcaagagttttatgccatttgccagcaaaagtacagaagcttcttcttgtctgctcctaaatcctaatcgaagttgaagcagtgcaggccgtcctcctttattaactctgtccccttaggagtcaggagaggaggacatcatcccctgctcgcaaaagccaacaagtaaggaatttatcagctaaaatgggagttactaattgctagtagaaacgaacagtaatttaccatttccttgggaccttggttgcttagagttaagtatggctctctgttccaccttcagcttcaatctcgctttgaacctgtattgctgtcctcagtgcggcctcatcagccgcttgagcaccatcctccgctgcatcgacttcggatcctgttgcactctcttccttcttgtcacttgaccgaataacatcttctctgatgccgttgatgaaaaggtcaatagtgttgctatgcttggcaacctctttgctaactgcgtctgtcgtcatcttaatgttggggctgttgatgtaccgtacgttgtagcatagtgttacctctgtaagctctttaaggttattgatacctgaaggaacactcatatcgcttgcagggaacgcgtgcaaagtcagtcgaagatatgtgagcttccgcatagcctctttttcgaaagtcagccatgggacagggcagtcaagggagaatctctcaagctctttgaacccttctttctcaatcactattgctttttcgggaatgaactccaagcctagtactaggtgctgcaattcgatcaagcccgcgaggatcttgagatcatctgctacttgtttgcagaccgtgatttgcaagaaagtaagatgcttgagccctctgatccatcggggaacactagcgaattttccatctattaccttaatttttttaagtccgttaggtggttctattagagaacccaggaactccatggaacatccgagtccacaatgaatggtcagggacttaagcttcctccatcttactatggatgatcgtagagcttgttggtagtctttatcactgcactggtgaaaggaccatgttattgcgaggacctccaatctgtccagatcaccgagagactgtattgactttgtagagaattcacttaaatcgatagttgctagcgtctttagatatcttaattggtggatcgtctccggtatctttgttagcactgttcggttggagtcaatcattccagatccaactccagtaccactaacgataagatgttccaggctctttagctgcacaatttgatctggcaactgccttatcagtgtgcctcttaggtctagcgtctccagattaggtagccggcatactccagaggggagatcacttgtcttggtgtggcttatatccaatctctctagccagatcagttccttgactttctctggaagatgtcttatccatgtgcctctgaggtccagaatctgcaaacgttttagctcacacacttctgatgggatctcacttatgttggtgcggcttatgtccaatgtcctcaggatgcgcagctccttgatctgaggtgcgagcttgctgacctttgtgttcctgacgctcagatacctcagcataaacattgtgcatatctgcagtaagtcctcatccttcaaattctcccagccttcaagatccaaccacaccagatatccaaacttgtcaagagcgaccgttgttctgtcgactgcaccagatatgagtagtgaacgagtctgagacaaatccatttgctgcagcattgctggaagctgcggatcaggatggtggagagctagacggcgtgctatccgagtggtgttgccaccaccgctcggtgctgaggtgagcgttgagctggtaaaaacaagacccatctctgctgctctggaggcaagaaacctcagtatgaaaggattgacctgccactggcacaagtcatcttcatcaatattgagtccacagttctctgctgctgggatgatgattttcctgttgagcaaccaagagaaattccgctttccaaaatctggactacgatcccactcatggatgaacccttcgtcttccaatatcgtgacaagatgatccttgttctcaaacacatatccctgtggaaacatgcttaggtagagtgacgattgtctcagctcatcactgtaatcaaatgataaccagtgttcaaactgtttcagcagcaggcgtacttcttccaccctaggaattgcagagctgccgtattgctgttgatgttgtttcaaccaatctgccatactagttatgaacaatggtattcctctacacatgttcaagatttcatcacataatagcctaagattgtctggaaggcaaccatccatggaactaaaagcttttgtgcgaagcagcttctctgaatccgagtcattgagaggcttcgtcttatgcacaaccccattataattagacaaaaaccacccagaaacctgctcatcgcgagctgtaaacaatattctgctactgcagttattattaggaaatgcacccttgatcatttccaaatctgatccgtcgaatatatcatcaatcaaagcaaagtatctggagggagaatacgaagagagaaaatattaagagaattcgagctctgatgctgctccgtaagagaagtcctaaatgagtacagtactatatagcagctgaattaagcaagcagtacatgttgtttacctcttatccttgaggcattctgatatgttgcgagccaacagctctgggtcgtcctccaacatcgtgatttctgagctgttaggtgatgatggtgcctccagttgctccatgatctgcttgaggatggtttgaagaagaagctgcttgctcctgtgagctggcctgcgggataagttagccacaacgtggcactggaaatgagtttggcaccggagtcgacggtggagctccatggcaagagtggtcttgccaatgccggcgggtccagcaatggccatgacccggaggctcttgtcggcggccatgagccatccgagcagctcgtttgccgtgccgtcgatgccaacaagatgatcatggacggcagcagcctcgacttgggctgcttgatgcagtgatggcatgagctccgagcttgggagcttgaggcgtggatcattggagaacacacggtagagatagtacgccagatacagaagtttgagagaccttgggtgccgatcacacagaagtttcatcatatctatggcatagttgaaagacattgggcggcggaagcaccgcatgggttttcgcagcagcgcgcgaggtgcttcttctcggtgccgtttacacagaaaattcaccatatctatggcgtccctcatctcgtgcttcagcatctcaagccaatccttctgtctacggatgagatcgaccccacgacgatctctgggtggcggcagcggcatcctcagggacgcgacaatgctgctcacctccccctccacgaacgccaaatagtgcctttcgtgggcatctgtgatgcgtccagcctccagcagctcagagatcctcccagggaggggctcccactccttcaacaactcctcccgcttcttcatgaaggaagttattagcgccgccgtctccggacttcccatcgctccctccgacat
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CDS seq | atgtcggagggagcgatgggaagtccggagacggcggcgctaataacttccttcatgaagaagcgggaggagttgttgaaggagtgggagcccctccctgggaggatctctgagctgctggaggctggacgcatcacagatgcccacgaaaggcactatttggcgttcgtggagggggaggtgagcagcattgtcgcgtccctgaggatgccgctgccgccacccagagatcgtcgtggggtcgatctcatccgtagacagaaggattggcttgagatgctgaagcacgagatgagggacgccatagatatggtgaattttctgtgtaaacggcaccgagaagaagcacctcgcgcgctgctgcgaaaacccatgcggtgcttccgccgcccaatgtctttcaactatgccatagatatgatgaaacttctgtgtgatcggcacccaaggtctctcaaacttctgtatctggcgtactatctctaccgtgtgttctccaatgatccacgcctcaagctcccaagctcggagctcatgccatcactgcatcaagcagcccaagtcgaggctgctgccgtccatgatcatcttgttggcatcgacggcacggcaaacgagctgctcggatggctcatggccgccgacaagagcctccgggtcatggccattgctggacccgccggcattggcaagaccactcttgccatggagctccaccgtcgactccggtgccaaactcatttccagtgccacgttgtggctaacttatcccgcaggccagctcacaggagcaagcagcttcttcttcaaaccatcctcaagcagatcatggagcaactggaggcaccatcatcacctaacagctcagaaatcacgatgttggaggacgacccagagctgttggctcgcaacatatcagaatgcctcaaggataagagatactttgctttgattgatgatatattcgacggatcagatttggaaatgatcaagggtgcatttcctaataataactgcagtagcagaatattgtttacagctcgcgatgagcaggtttctgggtggtttttgtctaattataatggggttgtgcataagacgaagcctctcaatgactcggattcagagaagctgcttcgcacaaaagcttttagttccatggatggttgccttccagacaatcttaggctattatgtgatgaaatcttgaacatgtgtagaggaataccattgttcataactagtatggcagattggttgaaacaacatcaacagcaatacggcagctctgcaattcctagggtggaagaagtacgcctgctgctgaaacagtttgaacactggttatcatttgattacagtgatgagctgagacaatcgtcactctacctaagcatgtttccacagggatatgtgtttgagaacaaggatcatcttgtcacgatattggaagacgaagggttcatccatgagtgggatcgtagtccagattttggaaagcggaatttctcttggttgctcaacaggaaaatcatcatcccagcagcagagaactgtggactcaatattgatgaagatgacttgtgccagtggcaggtcaatcctttcatactgaggtttcttgcctccagagcagcagagatgggtcttgtttttaccagctcaacgctcacctcagcaccgagcggtggtggcaacaccactcggatagcacgccgtctagctctccaccatcctgatccgcagcttccagcaatgctgcagcaaatggatttgtctcagactcgttcactactcatatctggtgcagtcgacagaacaacggtcgctcttgacaagtttggatatctggtgtggttggatcttgaaggctgggagaatttgaaggatgaggacttactgcagatatgcacaatgtttatgctgaggtatctgagcgtcaggaacacaaaggtcagcaagctcgcacctcagatcaaggagctgcgcatcctgaggacattggacataagccgcaccaacataagtgagatcccatcagaagtgtgtgagctaaaacgtttgcagattctggacctcagaggcacatggataagacatcttccagagaaagtcaaggaactgatctggctagagagattggatataagccacaccaagacaagtgatctcccctctggagtatgccggctacctaatctggagacgctagacctaagaggcacactgataaggcagttgccagatcaaattgtgcagctaaagagcctggaacatcttatcgttagtggtactggagttggatctggaatgattgactccaaccgaacagtgctaacaaagataccggagacgatccaccaattaagatatctaaagacgctagcaactatcgatttaagtgaattctctacaaagtcaatacagtctctcggtgatctggacagattggaggtcctcgcaataacatggtcctttcaccagtgcagtgataaagactaccaacaagctctacgatcatccatagtaagatggaggaagcttaagtccctgaccattcattgtggactcggatgttccatggagttcctgggttctctaatagaaccacctaacggacttaaaaaaattaaggtaatagatggaaaattcgctagtgttccccgatggatcagagggctcaagcatcttactttcttgcaaatcacggtctgcaaacaagtagcagatgatctcaagatcctcgcgggcttgatcgaattgcagcacctagtactaggcttggagttcattcccgaaaaagcaatagtgattgagaaagaagggttcaaagagcttgagagattctcccttgactgccctgtcccatggctgactttcgaaaaagaggctatgcggaagctcacatatcttcgactgactttgcacgcgttccctgcaagcgatatgagtgttccttcaggtatcaataaccttaaagagcttacagaggtaacactatgctacaacgtacggtacatcaacagccccaacattaagatgacgacagacgcagttagcaaagaggttgccaagcatagcaacactattgaccttttcatcaacggcatcagagaagatgttattcggtcaagtgacaagaaggaagagagtgcaacaggatccgaagtcgatgcagcggaggatggtgctcaagcggctgatgaggccgcactgaggacagcaatacaggttcaaagcgagattgaagctgaaggtggaacagagagccatacttaa
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Protein seq | MSEGAMGSPETAALITSFMKKREELLKEWEPLPGRISELLEAGRITDAHERHYLAFVEGEVSSIVASLRMPLPPPRDRRGVDLIRRQKDWLEMLKHEMRDAIDMVNFLCKRHREEAPRALLRKPMRCFRRPMSFNYAIDMMKLLCDRHPRSLKLLYLAYYLYRVFSNDPRLKLPSSELMPSLHQAAQVEAAAVHDHLVGIDGTANELLGWLMAADKSLRVMAIAGPAGIGKTTLAMELHRRLRCQTHFQCHVVANLSRRPAHRSKQLLLQTILKQIMEQLEAPSSPNSSEITMLEDDPELLARNISECLKDKRYFALIDDIFDGSDLEMIKGAFPNNNCSSRILFTARDEQVSGWFLSNYNGVVHKTKPLNDSDSEKLLRTKAFSSMDGCLPDNLRLLCDEILNMCRGIPLFITSMADWLKQHQQQYGSSAIPRVEEVRLLLKQFEHWLSFDYSDELRQSSLYLSMFPQGYVFENKDHLVTILEDEGFIHEWDRSPDFGKRNFSWLLNRKIIIPAAENCGLNIDEDDLCQWQVNPFILRFLASRAAEMGLVFTSSTLTSAPSGGGNTTRIARRLALHHPDPQLPAMLQQMDLSQTRSLLISGAVDRTTVALDKFGYLVWLDLEGWENLKDEDLLQICTMFMLRYLSVRNTKVSKLAPQIKELRILRTLDISRTNISEIPSEVCELKRLQILDLRGTWIRHLPEKVKELIWLERLDISHTKTSDLPSGVCRLPNLETLDLRGTLIRQLPDQIVQLKSLEHLIVSGTGVGSGMIDSNRTVLTKIPETIHQLRYLKTLATIDLSEFSTKSIQSLGDLDRLEVLAITWSFHQCSDKDYQQALRSSIVRWRKLKSLTIHCGLGCSMEFLGSLIEPPNGLKKIKVIDGKFASVPRWIRGLKHLTFLQITVCKQVADDLKILAGLIELQHLVLGLEFIPEKAIVIEKEGFKELERFSLDCPVPWLTFEKEAMRKLTYLRLTLHAFPASDMSVPSGINNLKELTEVTLCYNVRYINSPNIKMTTDAVSKEVAKHSNTIDLFINGIREDVIRSSDKKEESATGSEVDAAEDGAQAADEAALRTAIQVQSEIEAEGGTESHT |
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Function | Disease resistance protein Pikm1-TS [UniProtKB/Swiss-Prot:B5UBC1] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsLiXu_11g0019530 | OsLiXu_11g0019530.01 | Chr11 | 26627927 | 26631779 | - | NAM | ||
CDS seq | atgtcggagggagcgatgggaagtccggagacggcggcgctaataacttccttcatgaagaagcgggaggagttgttgaaggagtgggagcccctccctgggaggatctctgagctgctggaggctggacgcatcacagatgcccacgaaaggcactatttggcgttcgtggagggggaggtgagcagcattgtcgcgtccctgaggatgccgctgccgccacccagagatcgtcgtggggtcgatctcatccgtagacagaaggattggcttgagatgctgaagcacgagatgagggacgccatagatatggtgaattttctgtgtaaacggcaccgagaagaagcacctcgcgcgctgctgcgaaaacccatgcggtgcttccgccgcccaatgtctttcaactatgccatagatatgatgaaacttctgtgtgatcggcacccaaggtctctcaaacttctgtatctggcgtactatctctaccgtgtgttctccaatgatccacgcctcaagctcccaagctcggagctcatgccatcactgcatcaagcagcccaagtcgaggctgctgccgtccatgatcatcttgttggcatcgacggcacggcaaacgagctgctcggatggctcatggccgccgacaagagcctccgggtcatggccattgctggacccgccggcattggcaagaccactcttgccatggagctccaccgtcgactccggtgccaaactcatttccagtgccacgttgtggctaacttatcccgcaggccagctcacaggagcaagcagcttcttcttcaaaccatcctcaagcagatcatggagcaactggaggcaccatcatcacctaacagctcagaaatcacgatgttggaggacgacccagagctgttggctcgcaacatatcagaatgcctcaaggataagagatactttgctttgattgatgatatattcgacggatcagatttggaaatgatcaagggtgcatttcctaataataactgcagtagcagaatattgtttacagctcgcgatgagcaggtttctgggtggtttttgtctaattataatggggttgtgcataagacgaagcctctcaatgactcggattcagagaagctgcttcgcacaaaagcttttagttccatggatggttgccttccagacaatcttaggctattatgtgatgaaatcttgaacatgtgtagaggaataccattgttcataactagtatggcagattggttgaaacaacatcaacagcaatacggcagctctgcaattcctagggtggaagaagtacgcctgctgctgaaacagtttgaacactggttatcatttgattacagtgatgagctgagacaatcgtcactctacctaagcatgtttccacagggatatgtgtttgagaacaaggatcatcttgtcacgatattggaagacgaagggttcatccatgagtgggatcgtagtccagattttggaaagcggaatttctcttggttgctcaacaggaaaatcatcatcccagcagcagagaactgtggactcaatattgatgaagatgacttgtgccagtggcaggtcaatcctttcatactgaggtttcttgcctccagagcagcagagatgggtcttgtttttaccagctcaacgctcacctcagcaccgagcggtggtggcaacaccactcggatagcacgccgtctagctctccaccatcctgatccgcagcttccagcaatgctgcagcaaatggatttgtctcagactcgttcactactcatatctggtgcagtcgacagaacaacggtcgctcttgacaagtttggatatctggtgtggttggatcttgaaggctgggagaatttgaaggatgaggacttactgcagatatgcacaatgtttatgctgaggtatctgagcgtcaggaacacaaaggtcagcaagctcgcacctcagatcaaggagctgcgcatcctgaggacattggacataagccgcaccaacataagtgagatcccatcagaagtgtgtgagctaaaacgtttgcagattctggacctcagaggcacatggataagacatcttccagagaaagtcaaggaactgatctggctagagagattggatataagccacaccaagacaagtgatctcccctctggagtatgccggctacctaatctggagacgctagacctaagaggcacactgataaggcagttgccagatcaaattgtgcagctaaagagcctggaacatcttatcgttagtggtactggagttggatctggaatgattgactccaaccgaacagtgctaacaaagataccggagacgatccaccaattaagatatctaaagacgctagcaactatcgatttaagtgaattctctacaaagtcaatacagtctctcggtgatctggacagattggaggtcctcgcaataacatggtcctttcaccagtgcagtgataaagactaccaacaagctctacgatcatccatagtaagatggaggaagcttaagtccctgaccattcattgtggactcggatgttccatggagttcctgggttctctaatagaaccacctaacggacttaaaaaaattaaggtaatagatggaaaattcgctagtgttccccgatggatcagagggctcaagcatcttactttcttgcaaatcacggtctgcaaacaagtagcagatgatctcaagatcctcgcgggcttgatcgaattgcagcacctagtactaggcttggagttcattcccgaaaaagcaatagtgattgagaaagaagggttcaaagagcttgagagattctcccttgactgccctgtcccatggctgactttcgaaaaagaggctatgcggaagctcacatatcttcgactgactttgcacgcgttccctgcaagcgatatgagtgttccttcaggtatcaataaccttaaagagcttacagaggtaacactatgctacaacgtacggtacatcaacagccccaacattaagatgacgacagacgcagttagcaaagaggttgccaagcatagcaacactattgaccttttcatcaacggcatcagagaagatgttattcggtcaagtgacaagaaggaagagagtgcaacaggatccgaagtcgatgcagcggaggatggtgctcaagcggctgatgaggccgcactgaggacagcaatacaggttcaaagcgagattgaagctgaaggtggaacagagagccatacttaa
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Protein seq | MSEGAMGSPETAALITSFMKKREELLKEWEPLPGRISELLEAGRITDAHERHYLAFVEGEVSSIVASLRMPLPPPRDRRGVDLIRRQKDWLEMLKHEMRDAIDMVNFLCKRHREEAPRALLRKPMRCFRRPMSFNYAIDMMKLLCDRHPRSLKLLYLAYYLYRVFSNDPRLKLPSSELMPSLHQAAQVEAAAVHDHLVGIDGTANELLGWLMAADKSLRVMAIAGPAGIGKTTLAMELHRRLRCQTHFQCHVVANLSRRPAHRSKQLLLQTILKQIMEQLEAPSSPNSSEITMLEDDPELLARNISECLKDKRYFALIDDIFDGSDLEMIKGAFPNNNCSSRILFTARDEQVSGWFLSNYNGVVHKTKPLNDSDSEKLLRTKAFSSMDGCLPDNLRLLCDEILNMCRGIPLFITSMADWLKQHQQQYGSSAIPRVEEVRLLLKQFEHWLSFDYSDELRQSSLYLSMFPQGYVFENKDHLVTILEDEGFIHEWDRSPDFGKRNFSWLLNRKIIIPAAENCGLNIDEDDLCQWQVNPFILRFLASRAAEMGLVFTSSTLTSAPSGGGNTTRIARRLALHHPDPQLPAMLQQMDLSQTRSLLISGAVDRTTVALDKFGYLVWLDLEGWENLKDEDLLQICTMFMLRYLSVRNTKVSKLAPQIKELRILRTLDISRTNISEIPSEVCELKRLQILDLRGTWIRHLPEKVKELIWLERLDISHTKTSDLPSGVCRLPNLETLDLRGTLIRQLPDQIVQLKSLEHLIVSGTGVGSGMIDSNRTVLTKIPETIHQLRYLKTLATIDLSEFSTKSIQSLGDLDRLEVLAITWSFHQCSDKDYQQALRSSIVRWRKLKSLTIHCGLGCSMEFLGSLIEPPNGLKKIKVIDGKFASVPRWIRGLKHLTFLQITVCKQVADDLKILAGLIELQHLVLGLEFIPEKAIVIEKEGFKELERFSLDCPVPWLTFEKEAMRKLTYLRLTLHAFPASDMSVPSGINNLKELTEVTLCYNVRYINSPNIKMTTDAVSKEVAKHSNTIDLFINGIREDVIRSSDKKEESATGSEVDAAEDGAQAADEAALRTAIQVQSEIEAEGGTESHT
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.0 | 0.0 | 0.0 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0606400 | RBH | 2.511902 | 1.171710 | 0.169618 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g39310 | RBH | 1.635008 | 0.758533 | 0.042027 |
Nipponbare | IRGSP 1.0 | RAP-db | Os11g0606400 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0019790 | RBH | 1.457639 | 0.0 | 0.000000 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0019960 | RBH | 0.035429 | 0.296581 | 0.087987 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0019740 | SBH | 0.0 | 0.0 | 0.000000 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0019270 | RBH | 0.0 | 0.0 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0019810 | RBH | 0.0 | 7.217703 | 0.000000 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0356600 | RBH | 0.0294455 | 0.7655105 | 0.041654 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0020290 | SBH | 0.000000 | 0.027919 | 0.0 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0372500 | RBH | 8.3602705 | 0.178841 | 0.087625 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0020050 | RBH | 0.0 | 0.030156 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0020300 | SBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0019750 | SBH | 0.0 | 2.198174 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0019640 | RBH | 0.0 | 2.092294 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G019610 | RBH | 0.0 | 0.0 | 0.103604 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0019980 | SBH | 0.0 | 0.0 | 0.0 |