Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_09g0007090 | OGI:09032520 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr09:12213862-12216048 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atgttttttcattttttttctgtgcaaccagcttctgcgtacaatcctcccagagtgccagaaccgatgaatgctccagtaagtgaaaaatatcactgggatcatctggaaaaaaatgaaaaccgccaattcacctacgaggagctggagaagtttacaaataacttccaacgattaattggacaaggaggctttgggtgcgtgtatcatggttgtttagaagaccatactgaggttgctgtgaagatccattccgaaaattcacggcatgggtttagtgagtttttagccgaggtactaaactcagtcgacaaggaagttgaagaaactgtacaatacaaattttaacatcatatgtgtgatttacactatatatgttttgttcctcattataggttcagagcttgtcaaaggtccatcacaaaaatctagtttctttggttggctactgctcagagaaggctcatttagcattggtttacgagtatatgtctgggggcactctttttgatcatctaagaggtttgtacgttgcaaatagtatttattgagaataagaattacactctttgtttcacattataagatgttttaggttttaaatatattcatgcatagatgcatgtatgtgctttatatatgtgtccaaatttatatagatgttaagaaatctagatgaggaatggggataccaaaatatcttataatgtagaatggagggagtaatatgttcttctaactatttccaaaaaagtatacagtaacatttatacattatttgaacttgagaagccaccttgactaatttgaacaaatgtcaatatctgaactaagatttttttttgtggcattctacatgtacttgggaatacctgtaacagagtattagttatagtactgagtactatttctgagtactgacggctagaacatttgctagtttgaattatgtcaatggaacgatcatactttcattaactaatttattctatatagcattaattgtaatgtaatagaattgcataaagtgctgaaattgacatgtgaagtttttgattgggttctattataactatctgcattccattccatgcatatgaagataaaactggtgtgggcgaatccttgaattgggcatcgcgtgtgcgaattctgctagaagctgcacaaggtataccgcagcagaaagaagcaagatattagtagtaaatttctcttaaaaataagtgctaaaactcaagcattcttcttctcactactgttttttggcatgtgatacatttaggcctagattatctgtacacaggatgcaacaggccaataattcaccgtgatgtgaaaacaagcaatattctcttgggtcaaaatctacaggctaaaatagcagattttgggctttctaaagtttatgttagcgacacgcagactcacatgtcagccacggccgctggatcaatgggctatattgacccagagtacgtgcttctatgtccataacatatctttttttatatatctacttgttatgtttggattagtgaattttacttaattcagttcggaagatattggagtactattattgctcatataggtgcgtcagtctccagcctcatcacttattgcaattaacttatgcttcttaatgcaatatgtttttaggtactatctaactggtaggattacggagagcagtgatatttacagcttcggtgttgttcttttagaggtagtcactggtgagcgtccgataatacaaggccaaggccacatcatccaacgtataaaaatgaaagttgtggcgggtgacatcagctccattgctgatgcgcggctcagaggcgactacgatgtcaactccatatggaaggtggtggaaattgccatgctgtgcacagaacctgtcgctgctcaaaggccaacgatggcaagcgtggttgcagaactgaaggacagtttagtgccagatccaccaccacatcatgccgtcgctatgtcgcctacatttggtccgtcggcaagatgaagaagctgtacgcctgtacctctatatatacctgccttcggtgcatctagatggtctctcaataatggggcatgatgcatgaatcctagctatacatgtcgagaacgctattgagtcttgtgatgaacgatgtcattattaataaagtacattattcgtgc
More
|
||||||||||
| CDS seq | atgttttttcattttttttctgtgcaaccagcttctgcgtacaatcctcccagagtgccagaaccgatgaatgctccagtaagtgaaaaatatcactgggatcatctggaaaaaaatgaaaaccgccaattcacctacgaggagctggagaagtttacaaataacttccaacgattaattggacaaggaggctttgggtgcgtgtatcatggttgtttagaagaccatactgaggttgctgtgaagatccattccgaaaattcacggcatgggtttagtgagtttttagccgaggttcagagcttgtcaaaggctaaaatagcagattttgggctttctaaagtttatgttagcgacacgcagactcacatgtcagccacggccgctggatcaatgggctatattgacccagagtactatctaactggtaggattacggagagcagtgatatttacagcttcggtgttgttcttttagaggtagtcactggtgagcgtccgataatacaaggccaaggccacatcatccaacgtataaaaatgaaagttgtggcgggtgacatcagctccattgctgatgcgcggctcagaggcgactacgatgtcaactccatatggaaggtggtggaaattgccatgctgtgcacagaacctgtcgctgctcaaaggccaacgatggcaagcgtggttgcagaactgaaggacagtttagtgccagatccaccaccacatcatgccgtcgctatgtcgcctacatttggtccgtcggcaagatga
More
|
||||||||||
| Protein seq | MFFHFFSVQPASAYNPPRVPEPMNAPVSEKYHWDHLEKNENRQFTYEELEKFTNNFQRLIGQGGFGCVYHGCLEDHTEVAVKIHSENSRHGFSEFLAEVQSLSKAKIADFGLSKVYVSDTQTHMSATAAGSMGYIDPEYYLTGRITESSDIYSFGVVLLEVVTGERPIIQGQGHIIQRIKMKVVAGDISSIADARLRGDYDVNSIWKVVEIAMLCTEPVAAQRPTMASVVAELKDSLVPDPPPHHAVAMSPTFGPSAR |
||||||||||
| Function | LRR receptor-like serine/threonine-protein kinase IOS1 [UniProtKB/Swiss-Prot:Q9C8I6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_09g0007090 | OsLiXu_09g0007090.01 | Chr09 | 12213862 | 12216048 | + | NAM | ||
| CDS seq | atgttttttcattttttttctgtgcaaccagcttctgcgtacaatcctcccagagtgccagaaccgatgaatgctccagtaagtgaaaaatatcactgggatcatctggaaaaaaatgaaaaccgccaattcacctacgaggagctggagaagtttacaaataacttccaacgattaattggacaaggaggctttgggtgcgtgtatcatggttgtttagaagaccatactgaggttgctgtgaagatccattccgaaaattcacggcatgggtttagtgagtttttagccgaggttcagagcttgtcaaaggctaaaatagcagattttgggctttctaaagtttatgttagcgacacgcagactcacatgtcagccacggccgctggatcaatgggctatattgacccagagtactatctaactggtaggattacggagagcagtgatatttacagcttcggtgttgttcttttagaggtagtcactggtgagcgtccgataatacaaggccaaggccacatcatccaacgtataaaaatgaaagttgtggcgggtgacatcagctccattgctgatgcgcggctcagaggcgactacgatgtcaactccatatggaaggtggtggaaattgccatgctgtgcacagaacctgtcgctgctcaaaggccaacgatggcaagcgtggttgcagaactgaaggacagtttagtgccagatccaccaccacatcatgccgtcgctatgtcgcctacatttggtccgtcggcaagatga
More
|
|||||||
| Protein seq | MFFHFFSVQPASAYNPPRVPEPMNAPVSEKYHWDHLEKNENRQFTYEELEKFTNNFQRLIGQGGFGCVYHGCLEDHTEVAVKIHSENSRHGFSEFLAEVQSLSKAKIADFGLSKVYVSDTQTHMSATAAGSMGYIDPEYYLTGRITESSDIYSFGVVLLEVVTGERPIIQGQGHIIQRIKMKVVAGDISSIADARLRGDYDVNSIWKVVEIAMLCTEPVAAQRPTMASVVAELKDSLVPDPPPHHAVAMSPTFGPSAR
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0358000 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g19510 | RBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0358000 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0007270 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0007250 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0007480 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0007300 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0007430 | RBH | 4.070340 | 0.0 | 4.117413 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0201500 | SBH | 0 | 0 | 0.0070865 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0007360 | SBH | 0.910574 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0180300 | RBH | 0 | 0 | 0.0071475 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0007350 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0007150 | RBH | 0.184005 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0007050 | SBH | 0.000000 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0051000 | RBH | 0.0 | 0.0 | 0.092258 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0007160 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G007690 | RBH | 0.306000 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0007490 | RBH | 0.235855 | 0.0 | 0.0 |
