Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os09g0358000 | OGI:09032520 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr09:11576100-11576772 | ||||||||
| Gene Symbol | D305, OsD305, RLCK267, OsRLCK267, OsRPK1, RPK1, OsCBM1 | ||||||||||
| DNA seq | GCACTTGGAAAAAAATAGAAGCAAACTTAATCCATCACAATGCACGCATGAGCATACATAGCTTAACATTACATAATTTATCACAAGAGCATTGTACAGTTGTGGTGCGATACCATGAACGATGCACCATGGGTAGGTACAGGTACAGCTTGATCTTCATCTTGCTGATGGACCGAACGTGGGCACCATAGCCACCACTACATCATCCGTTGGGTTCTCCTTGAGTCCCCTTTCCTGACGAGCTTCCTCCAATGTTAGACTCTCCTTCAGCTGTGCAACCACGGCTGCCATGGATGGCCTCCGAGCTGCTACAGGTTCCGTGCACAACAAAGCGATTTCTACCACCTTCCACATGGAGTTAACATCATAGTCATCCCCAAGTCGCTGATCGGCAATGGAGCTGATGTCCCCTGAATCAACCTTCTGTTTCACACGCTGAATGATGTGACCATGGCCTTGTAATATCGGAAGCTCACCGGTGACTACCTCTAGAAGAACAACACCAAAGCTATAGACATCATTGTTCTCAGTGATCCAGCCAGTTTGGTAGTACCTTGGAAAAATGCATTGAAATAATTTAATTTTCTTTTGAATATATGCAAAACAAGTAAACAATGATATGATAGGGATATAGAAGAACATACTCGGGGTCAATGTAACCCATTGATCCAGC
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| CDS seq | ATGGGTTACATTGACCCCGAGTACTACCAAACTGGCTGGATCACTGAGAACAATGATGTCTATAGCTTTGGTGTTGTTCTTCTAGAGGTAGTCACCGGTGAGCTTCCGATATTACAAGGCCATGGTCACATCATTCAGCGTGTGAAACAGAAGGTTGATTCAGGGGACATCAGCTCCATTGCCGATCAGCGACTTGGGGATGACTATGATGTTAACTCCATGTGGAAGGTGGTAGAAATCGCTTTGTTGTGCACGGAACCTGTAGCAGCTCGGAGGCCATCCATGGCAGCCGTGGTTGCACAGCTGAAGGAGAGTCTAACATTGGAGGAAGCTCGTCAGGAAAGGGGACTCAAGGAGAACCCAACGGATGATGTAGTGGTGGCTATGGTGCCCACGTTCGGTCCATCAGCAAGATGA
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| Protein seq | MGYIDPEYYQTGWITENNDVYSFGVVLLEVVTGELPILQGHGHIIQRVKQKVDSGDISSIADQRLGDDYDVNSMWKVVEIALLCTEPVAARRPSMAAVVAQLKESLTLEEARQERGLKENPTDDVVVAMVPTFGPSAR |
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| Function | Probable LRR receptor-like serine/threonine-protein kinase At1g51880 [UniProtKB/Swiss-Prot:Q9FZB1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os09g0358000 | Os09t0358000-00 | Chr09 | 11576100 | 11576772 | - | irgsp1_rep | ||
| CDS seq | ATGGGTTACATTGACCCCGAGTACTACCAAACTGGCTGGATCACTGAGAACAATGATGTCTATAGCTTTGGTGTTGTTCTTCTAGAGGTAGTCACCGGTGAGCTTCCGATATTACAAGGCCATGGTCACATCATTCAGCGTGTGAAACAGAAGGTTGATTCAGGGGACATCAGCTCCATTGCCGATCAGCGACTTGGGGATGACTATGATGTTAACTCCATGTGGAAGGTGGTAGAAATCGCTTTGTTGTGCACGGAACCTGTAGCAGCTCGGAGGCCATCCATGGCAGCCGTGGTTGCACAGCTGAAGGAGAGTCTAACATTGGAGGAAGCTCGTCAGGAAAGGGGACTCAAGGAGAACCCAACGGATGATGTAGTGGTGGCTATGGTGCCCACGTTCGGTCCATCAGCAAGATGA
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| Protein seq | MGYIDPEYYQTGWITENNDVYSFGVVLLEVVTGELPILQGHGHIIQRVKQKVDSGDISSIADQRLGDDYDVNSMWKVVEIALLCTEPVAARRPSMAAVVAQLKESLTLEEARQERGLKENPTDDVVVAMVPTFGPSAR |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0358000 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g19350 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0356800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0007270 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0007250 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0007300 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0007260 | RBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0007430 | SBH | 4.070340 | 0.0 | 4.117413 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0200000 | RBH | 0.0170675 | 1.3587945 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0007020 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0179100 | RBH | 5.70113 | 15.5859745 | 16.5932345 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0007310 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0007140 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0006810 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0007040 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0007020 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G007650 | RBH | 0.000000 | 0.000000 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0007450 | RBH | 0.0 | 4.421762 | 0.0 |
