Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsLiXu_06g0020940 OGI:06063770 | 16/16 LIU XU | Os125827RS1 | Gramene(+IsoSeq) Chr06:23969111-23972708
Gene Symbol RLCK213, OsRLCK213
DNA seq

tcagccccgtagtgctgaaaatgttgcttttattgttgttacttcggaaaaaacaccctgcgatgttggccgatcttttggtgactccattgagcatgagagaccaagcttaagtagttggacggtgcagccccaaaagccagatattgcatgattcccatgatctaagttactctctagatcattatcttcaaaatatggaatgatgttaggatctacgatatcaacaatattttgagggaatgatttgtccacaaatttgtgaatgctcagaccatctttaaacatctcatctgttggacgctttcctgtgagcatttctaatatcataattccataactgtagatatcaccctctgtggaaatttttctcccgatgccatactctgcaatattgtgtgtaattgttcaaacaactaattacctctattcattaaacggaatataattaaaacaataaaagttgcacaagaaaagaaatcaatatatatctggcagaaatttgttgttgtatttcaggaatacaagaaaaaagattgtcacctggtgcgatatatccgactgatcctcttggtcccattaaacttgttgagctgttaatccctgaaggataatgaagcaacttagctaacccaaagtcactaacacatgcacccatgacatcgtccagaaggacattgctaggcttcagatcacaatgaactataggagggctgcaatggttgtgtagataatccaaggcacatgccacatccactgctattattattctagagcccaaactcaatggtttctctagaccatatttgttaaattttggatagagccagctctctaggttaccattagccatgtagtcgaggataagagctttgaactcattccctgttgtatcacatgtggagcatgcagtaatgaccttcactagattacgatggcgagtgttcttcagggcttcacactctgcaataaagcttttgggtgcaccaagttgatcaagtttaaatacttttatagcaacggcatgtccttcagaatcaaatctacctttgtagacagatccatactttcctgaaccgatcaagtttgctgatgagaaaccatttgttgctttgagtagatcagaataggagactcttttcaattccttcatggataagagtgcttggttttttgccttctttgttcttcttgaaacaacagctactaaacatgacaaaaagaacaatgctagagcagcaagtcccactgccttcacaatgtagagattgtgctttcttttggaggctaatgtgtagcaaagtggcaactgtagcaagtGgaaattggaacataacttattgttcccttgtacaaacacctcgcttgcattataaaagatacctcctgttggtactggtccctcaaggttgttgaaggacaaatttagaagctttaaagaattgaaggactcaaagaactttggaatttcaccagagaggttgtttcgagaaagatccatgtcaaatatgcctctcaagttcatcaatggttctggtatcctcccatcaagaaggttgccctccatgtggagagactctaagtgaaggcaattagctagagtggagggaatttctccagataattgattgttggaaatattgagaggtccaagattgactaggccaccaatttccagtggtataagaccagatagaaggttgtgggacaagtctaagcattctgagagggagtacaaAGagaaaatctcttttggtatgcttccttcgaaggcattacaagaaaggttcagagtcaccaaatttttgcattctcctagtgatctagggatcgatccactcaaattattttcttgcaaatacaactcattcaatttactgagtttaccaattgaaagtgggatctgcccagaaagtttgttgagcgataagcctaggacaaacaaatttgaaagatttccaagtgtttcaggaatatttcccgtgagtaagttttgatctatttgaagaagtgtgaggtttgtgaggtatcctattcctggtggtattgtaccggatattttatttgcagtcaaatacagaatctctaagcttttagaaagattagagattgagcttggcaacatcccttccaagttgtttttgtctaaatatatttccgtcaattgtgtgcaattggtcaatgaggagatgaaagaccaatctccagcttcaagctggttctggcctagaattagtttacttaagtttggcagtagcccaaaggaaggaacaatgccatgtaactcattgtcacgaagatcaattacctgcagatttgttgcattggctagtgacgatggtatgtttccttggaataggtttccctgcatgatcaatgtttggatgcttggaagggtctgcccgatgtcgtctggaatttctccaatgagacggttcgtacccatgccaaggtaagtgagtgatgacatgttgtaaatagagggcggaactgttcctgacaaattattgatggtcagatctaatgcatccaagtagggaattttgcctatgctggagggaatgtttccatgcaagttattctcggcaagaagtagccagacaagattagaaaagtttgctatggtggagggtatgacacctgacagattattttgggacaagagaagaaactttagcggtgagtagatgtttgagacagatgggatagatccaaaaaaattgttccctgacagacctatgacttgaagttgggtgctattgaacagatcaggaggaagctgcccagtgagatcattgtttgttaagtccaaacctattagcgatgaactgtttgctaggagtggtgggatgcctccagtgaggctattatcagatagaaaaacgaaactgagtgatgggctgctccctagtgaaaacggaatgtcgccggtcaggttattgttagcaagtagcaattttgaaaggttagggagcatgcccaaccctgctgggatgcttccatacagcttgttatggtccaagaagatcacctgaagattcagacattccttcaagcctgacgggatctcaccatggagtaagttgaaaccgagatcgataatctgaagtcgcgagcaggaagtcaaagagttgggtatagcgccagataggtggtttgagctgaggttcagatagcttaggcgacgcagatcgccaagctcaggtgggatctcaccgctcagctgattgtttgggaggtggattcttgtgaggaaagtgaggttggcaatgcagggtggtatctggccatcaaggccagtctgctccaggtccagacctgtcacacgagatgcatggctcttgctgcaagtgacaccaggccaagtgcagtgatcaagggaggccgagccactgctattccatgagtccagggctccactgttgttagaaagatgttgcttgaagcaaaggagggcctggaaatcactgttggaagtttcagtggacgaagtggcgtaggcggtaaaggtggaggaagttaggacggcaatgatcgagagcagtgagaagctcagagagcagtagcaaCTGATGCCTCCTACTGGAGACCTGTGCAT

More
CDS seq

ATGCACAGGTCTCCAGTAGGAGGCATCAGttgctactgctctctgagcttctcactgctctcgatcattgccgtcctaacttcctccacctttaccgcctacgccacttcgtccactgaaacttccaacagtgatttccaggccctcctttgcttcaagcaacatctttctaacaacagtggagccctggactcatggaatagcagtggctcggcctcccttgatcactgcacttggcctggtgtcacttgcagcaagagccatgcatctcgtgtgacaggtctggacctggagcagactggccttgatggccagataccaccctgcattgccaacctcactttcctcacaagaatccacctcccaaacaatcagctgagcggtgagatcccacctgagcttggcgatctgcgtcgcctaagctatctgaacctcagctcaaaccacctatctggcgctatacccaactctttgacttcctgctcgcgacttcagattatcgatctcggtttcaacttactccatggtgagatcccgtcaggcttgaaggaatgtctgaatcttcaggtgatcttcttggaccataacaagctgtatggaagcatcccagcagggttgggcatgctccctaacctttcaaaattgctacttgctaacaataacctgaccggcgacattccgttttcactagggagcagcccatcactcagtttcgtttttctatctgataatagcctcactggaggcatcccaccactcctagcaaacagttcatcgctaataggtttggacttaacaaacaatgatctcactgggcagcttcctcctgatctgttcaatagcacccaacttcaagtcataggtctgtcagggaacaatttttttggatctatcccatctgtctcaaacatctactcaccgctaaagtttcttctcttgtcccaaaataatctgtcaggtgtcataccctccaccatagcaaacttttctaatcttgtctggctacttcttgccgagaataacttgcatggaaacattccctccagcataggcaaaattccctacttggatgcattagatctgaccatcaataatttgtcaggaacagttccgccctctatttacaacatgtcatcactcacttaccttggcatgggtacgaaccgtctcattggagaaattccagacgacatcgggcagacccttccaagcatccaaacattgatcatgcagggaaacctattccaaggaaacataccatcgtcactagccaatgcaacaaatctgcaggtaattgatcttcgtgacaatgagttacatggcattgttccttcctttgggctactgccaaacttaagtaaactaattctaggccagaaccagcttgaagctggagattggtctttcatctcctcattgaccaattgcacacaattgacggaaatatatttagacaaaaacaacttggaagggatgttgccaagctcaatctctaatctttctaaaagcttagagattctgtatttgactgcaaataaaatatccggtacaataccaccaggaataggatacctcacaaacctcacacttcttcaaatagatcaaaacttactcacgggaaatattcctgaaacacttggaaatctttcaaatttgtttgtcctaggcttatcgctcaacaaactttctgggcagatcccactttcaattggtaaactcagtaaattgaatgagttgtatttgcaagaaaataatttgagtggatcgatccctagatcactaggagaatgcaaaaatttggtgactctgaacctttcttgtaatgccttcgaaggaagcataccaaaagagattttctCTttgtactccctctcagaatgcttagacttgtcccacaaccttctatctggtcttataccactggaaattggtggcctagtcaatcttggacctctcaatatttccaacaatcaattatctggagaaattccctccactctagctaattgccttcacttagagtctctccacatggagggcaaccttcttgatgggaggataccagaaccattgatgaacttgagaggcatatttgacatggatctttctcgaaacaacctctctggtgaaattccaaagttctttgagtccttcaattctttaaagcttctaaatttgtccttcaacaaccttgagggaccagtaccaacaggaggtatcttttataatgcaagcgaggtgtttgtacaagggaacaataagttatgttccaatttcCacttgctacagttgccactttgctacacattagcctccaaaagaaagcacaatctctacattgtgaaggcagtgggacttgctgctctagcattgttctttttgtcatgtttagtagctgttgtttcaagaagaacaaagaaggcaaaaaaccaagcactcttatccatgaaggaattgaaaagagtctcctattctgatctactcaaagcaacaaatggtttctcatcagcaaacttgatcggttcaggaaagtatggatctgtctacaaaggtagatttgattctgaaggacatgccgttgctataaaagtatttaaacttgatcaacttggtgcacccaaaagctttattgcagagtgtgaagccctgaagaacactcgccatcgtaatctagtgaaggtcattactgcatgctccacatgtgatacaacagggaatgagttcaaagctcttatcctcgactacatggctaatggtaacctagagagctggctctatccaaaatttaacaaatatggtctagagaaaccattgagtttgggctctagaataataatagcagtggatgtggcatgtgccttggattatctacacaaccattgcagccctcctatagttcattgtgatctgaagcctagcaatgtccttctggacgatgtcatgggtgcatgtgttagtgactttgggttagctaagttgcttcattatccttcagggattaacagctcaacaagtttaatgggaccaagaggatcagtcggatatatcgcaccagagtatggcatcgggagaaaaatttccacagagggtgatatctacagttatggaattatgatattagaaatgctcacaggaaagcgtccaacagatgagatgtttaaagatggtctgagcattcacaaatttgtggacaaatcattccctcaaaatattgttgatatcgtagatcctaacatcattccatattttgaagataatgatctagagagtaacttagatcatgggaatcatgcaatatctggcttttggggctgcaccgtccaactacttaagcttggtctctcatgctcaatggagtcaccaaaagatcggccaacatcgcagggtgttttttccgaagtaacaacaataaaagcaacattttcagcactacggggctga

More
Protein seq

MHRSPVGGISCYCSLSFSLLSIIAVLTSSTFTAYATSSTETSNSDFQALLCFKQHLSNNSGALDSWNSSGSASLDHCTWPGVTCSKSHASRVTGLDLEQTGLDGQIPPCIANLTFLTRIHLPNNQLSGEIPPELGDLRRLSYLNLSSNHLSGAIPNSLTSCSRLQIIDLGFNLLHGEIPSGLKECLNLQVIFLDHNKLYGSIPAGLGMLPNLSKLLLANNNLTGDIPFSLGSSPSLSFVFLSDNSLTGGIPPLLANSSSLIGLDLTNNDLTGQLPPDLFNSTQLQVIGLSGNNFFGSIPSVSNIYSPLKFLLLSQNNLSGVIPSTIANFSNLVWLLLAENNLHGNIPSSIGKIPYLDALDLTINNLSGTVPPSIYNMSSLTYLGMGTNRLIGEIPDDIGQTLPSIQTLIMQGNLFQGNIPSSLANATNLQVIDLRDNELHGIVPSFGLLPNLSKLILGQNQLEAGDWSFISSLTNCTQLTEIYLDKNNLEGMLPSSISNLSKSLEILYLTANKISGTIPPGIGYLTNLTLLQIDQNLLTGNIPETLGNLSNLFVLGLSLNKLSGQIPLSIGKLSKLNELYLQENNLSGSIPRSLGECKNLVTLNLSCNAFEGSIPKEIFSLYSLSECLDLSHNLLSGLIPLEIGGLVNLGPLNISNNQLSGEIPSTLANCLHLESLHMEGNLLDGRIPEPLMNLRGIFDMDLSRNNLSGEIPKFFESFNSLKLLNLSFNNLEGPVPTGGIFYNASEVFVQGNNKLCSNFHLLQLPLCYTLASKRKHNLYIVKAVGLAALALFFLSCLVAVVSRRTKKAKNQALLSMKELKRVSYSDLLKATNGFSSANLIGSGKYGSVYKGRFDSEGHAVAIKVFKLDQLGAPKSFIAECEALKNTRHRNLVKVITACSTCDTTGNEFKALILDYMANGNLESWLYPKFNKYGLEKPLSLGSRIIIAVDVACALDYLHNHCSPPIVHCDLKPSNVLLDDVMGACVSDFGLAKLLHYPSGINSSTSLMGPRGSVGYIAPEYGIGRKISTEGDIYSYGIMILEMLTGKRPTDEMFKDGLSIHKFVDKSFPQNIVDIVDPNIIPYFEDNDLESNLDHGNHAISGFWGCTVQLLKLGLSCSMESPKDRPTSQGVFSEVTTIKATFSALRG

Function Probable LRR receptor-like serine/threonine-protein kinase At3g47570 [UniProtKB/Swiss-Prot:C0LGP4]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsLiXu_06g0020940 OsLiXu_06g0020940.01 Chr06 23969111 23972708 - NAM
CDS seq

ATGCACAGGTCTCCAGTAGGAGGCATCAGttgctactgctctctgagcttctcactgctctcgatcattgccgtcctaacttcctccacctttaccgcctacgccacttcgtccactgaaacttccaacagtgatttccaggccctcctttgcttcaagcaacatctttctaacaacagtggagccctggactcatggaatagcagtggctcggcctcccttgatcactgcacttggcctggtgtcacttgcagcaagagccatgcatctcgtgtgacaggtctggacctggagcagactggccttgatggccagataccaccctgcattgccaacctcactttcctcacaagaatccacctcccaaacaatcagctgagcggtgagatcccacctgagcttggcgatctgcgtcgcctaagctatctgaacctcagctcaaaccacctatctggcgctatacccaactctttgacttcctgctcgcgacttcagattatcgatctcggtttcaacttactccatggtgagatcccgtcaggcttgaaggaatgtctgaatcttcaggtgatcttcttggaccataacaagctgtatggaagcatcccagcagggttgggcatgctccctaacctttcaaaattgctacttgctaacaataacctgaccggcgacattccgttttcactagggagcagcccatcactcagtttcgtttttctatctgataatagcctcactggaggcatcccaccactcctagcaaacagttcatcgctaataggtttggacttaacaaacaatgatctcactgggcagcttcctcctgatctgttcaatagcacccaacttcaagtcataggtctgtcagggaacaatttttttggatctatcccatctgtctcaaacatctactcaccgctaaagtttcttctcttgtcccaaaataatctgtcaggtgtcataccctccaccatagcaaacttttctaatcttgtctggctacttcttgccgagaataacttgcatggaaacattccctccagcataggcaaaattccctacttggatgcattagatctgaccatcaataatttgtcaggaacagttccgccctctatttacaacatgtcatcactcacttaccttggcatgggtacgaaccgtctcattggagaaattccagacgacatcgggcagacccttccaagcatccaaacattgatcatgcagggaaacctattccaaggaaacataccatcgtcactagccaatgcaacaaatctgcaggtaattgatcttcgtgacaatgagttacatggcattgttccttcctttgggctactgccaaacttaagtaaactaattctaggccagaaccagcttgaagctggagattggtctttcatctcctcattgaccaattgcacacaattgacggaaatatatttagacaaaaacaacttggaagggatgttgccaagctcaatctctaatctttctaaaagcttagagattctgtatttgactgcaaataaaatatccggtacaataccaccaggaataggatacctcacaaacctcacacttcttcaaatagatcaaaacttactcacgggaaatattcctgaaacacttggaaatctttcaaatttgtttgtcctaggcttatcgctcaacaaactttctgggcagatcccactttcaattggtaaactcagtaaattgaatgagttgtatttgcaagaaaataatttgagtggatcgatccctagatcactaggagaatgcaaaaatttggtgactctgaacctttcttgtaatgccttcgaaggaagcataccaaaagagattttctCTttgtactccctctcagaatgcttagacttgtcccacaaccttctatctggtcttataccactggaaattggtggcctagtcaatcttggacctctcaatatttccaacaatcaattatctggagaaattccctccactctagctaattgccttcacttagagtctctccacatggagggcaaccttcttgatgggaggataccagaaccattgatgaacttgagaggcatatttgacatggatctttctcgaaacaacctctctggtgaaattccaaagttctttgagtccttcaattctttaaagcttctaaatttgtccttcaacaaccttgagggaccagtaccaacaggaggtatcttttataatgcaagcgaggtgtttgtacaagggaacaataagttatgttccaatttcCacttgctacagttgccactttgctacacattagcctccaaaagaaagcacaatctctacattgtgaaggcagtgggacttgctgctctagcattgttctttttgtcatgtttagtagctgttgtttcaagaagaacaaagaaggcaaaaaaccaagcactcttatccatgaaggaattgaaaagagtctcctattctgatctactcaaagcaacaaatggtttctcatcagcaaacttgatcggttcaggaaagtatggatctgtctacaaaggtagatttgattctgaaggacatgccgttgctataaaagtatttaaacttgatcaacttggtgcacccaaaagctttattgcagagtgtgaagccctgaagaacactcgccatcgtaatctagtgaaggtcattactgcatgctccacatgtgatacaacagggaatgagttcaaagctcttatcctcgactacatggctaatggtaacctagagagctggctctatccaaaatttaacaaatatggtctagagaaaccattgagtttgggctctagaataataatagcagtggatgtggcatgtgccttggattatctacacaaccattgcagccctcctatagttcattgtgatctgaagcctagcaatgtccttctggacgatgtcatgggtgcatgtgttagtgactttgggttagctaagttgcttcattatccttcagggattaacagctcaacaagtttaatgggaccaagaggatcagtcggatatatcgcaccagagtatggcatcgggagaaaaatttccacagagggtgatatctacagttatggaattatgatattagaaatgctcacaggaaagcgtccaacagatgagatgtttaaagatggtctgagcattcacaaatttgtggacaaatcattccctcaaaatattgttgatatcgtagatcctaacatcattccatattttgaagataatgatctagagagtaacttagatcatgggaatcatgcaatatctggcttttggggctgcaccgtccaactacttaagcttggtctctcatgctcaatggagtcaccaaaagatcggccaacatcgcagggtgttttttccgaagtaacaacaataaaagcaacattttcagcactacggggctga

More
Protein seq

MHRSPVGGISCYCSLSFSLLSIIAVLTSSTFTAYATSSTETSNSDFQALLCFKQHLSNNSGALDSWNSSGSASLDHCTWPGVTCSKSHASRVTGLDLEQTGLDGQIPPCIANLTFLTRIHLPNNQLSGEIPPELGDLRRLSYLNLSSNHLSGAIPNSLTSCSRLQIIDLGFNLLHGEIPSGLKECLNLQVIFLDHNKLYGSIPAGLGMLPNLSKLLLANNNLTGDIPFSLGSSPSLSFVFLSDNSLTGGIPPLLANSSSLIGLDLTNNDLTGQLPPDLFNSTQLQVIGLSGNNFFGSIPSVSNIYSPLKFLLLSQNNLSGVIPSTIANFSNLVWLLLAENNLHGNIPSSIGKIPYLDALDLTINNLSGTVPPSIYNMSSLTYLGMGTNRLIGEIPDDIGQTLPSIQTLIMQGNLFQGNIPSSLANATNLQVIDLRDNELHGIVPSFGLLPNLSKLILGQNQLEAGDWSFISSLTNCTQLTEIYLDKNNLEGMLPSSISNLSKSLEILYLTANKISGTIPPGIGYLTNLTLLQIDQNLLTGNIPETLGNLSNLFVLGLSLNKLSGQIPLSIGKLSKLNELYLQENNLSGSIPRSLGECKNLVTLNLSCNAFEGSIPKEIFSLYSLSECLDLSHNLLSGLIPLEIGGLVNLGPLNISNNQLSGEIPSTLANCLHLESLHMEGNLLDGRIPEPLMNLRGIFDMDLSRNNLSGEIPKFFESFNSLKLLNLSFNNLEGPVPTGGIFYNASEVFVQGNNKLCSNFHLLQLPLCYTLASKRKHNLYIVKAVGLAALALFFLSCLVAVVSRRTKKAKNQALLSMKELKRVSYSDLLKATNGFSSANLIGSGKYGSVYKGRFDSEGHAVAIKVFKLDQLGAPKSFIAECEALKNTRHRNLVKVITACSTCDTTGNEFKALILDYMANGNLESWLYPKFNKYGLEKPLSLGSRIIIAVDVACALDYLHNHCSPPIVHCDLKPSNVLLDDVMGACVSDFGLAKLLHYPSGINSSTSLMGPRGSVGYIAPEYGIGRKISTEGDIYSYGIMILEMLTGKRPTDEMFKDGLSIHKFVDKSFPQNIVDIVDPNIIPYFEDNDLESNLDHGNHAISGFWGCTVQLLKLGLSCSMESPKDRPTSQGVFSEVTTIKATFSALRG

More
Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.106603 0.000000 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_06g0581500 SBH 0.767197 0.973630 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os06g38340 RBH 0.518819 0.654847 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os06g0581500 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_06g0020780 SBH 0.134115 1.062366 0.983788
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_06g0020720 SBH 0.000000 0.313071 0.000000
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_06g0020730 SBH 0.119523 0.974873 2.135322
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_06g0020330 SBH 0.041708 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_06g0020980 SBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_06G0359800 RBH 1.38885 0.471326 0.3038075
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_06g0020420 SBH 0.0 0.162646 0.125249
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_06G0334400 SBH 0.3506075 7.301107 0.597278
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_06g0020590 SBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_06g0020630 SBH 0.000000 0.000000 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_06g0020240 SBH 0.000000 5.529106 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_Ung0036910 SBH 0.000000 0.0 0.067018
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_06g0020390 SBH 0.034462 1.618995 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_06G020300 SBH 0.024920 0.839867 0.152815
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_06g0020560 SBH 0.0 0.0 0.674161
Powered by

© 2021- Rice Gene Index @Zhang Lab. All Rights Reserved.

National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

Any comments and suggestions, please contact us.