Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_04g0010280 | OGI:04058500 | 15/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr04:19296629-19297903 | ||||||||
| Gene Symbol | WAK38, OsWAK38 | ||||||||||
| DNA seq | tcatctctcgaaaattttagcatcagatcgagtcaatgctttacgtttccccggtcctattagctcagaagagaccccatggtcaggatcctcatatctttcgaaaattttagcattagatcgaatcaatgctttacttttccccggttttattagctgagaagagacgttatgatcatgctcatctgagtttccagcagagataccatggtcagtctcatcatctgagcttccagcagagatgtcatgaacaggttcatctgaatttccagctacactgataatgctatcatccaagactggagacacccggtgcggagtcgatgggccggagaaaccatcagctacatttgaaattttcacgcaaatcatagctacggatcgtgttaaggcattcttcttggcttccaaactgtgaacgtactccaggtacctgagtacgtctcccatcgatggccgatccgctcccttgtcttccaggcacctggccacaatttggccaaatggcatcagagaacgctgtttgactgtgcctgaaatttcctgatcaacaatttgttccagctgtccattcctcagcatctcctttccccagtctgccaagttcacctccttgagcggaagtgtttggtcgatcgctggtctgccacataggacctcaagcaagacaacaccaaaagagtagacatcagacttctgggtgagcagcatcgtcttgcaatattcaggatcaagatacccaaagctgcccttcacttgagtgatgacataagtttggtccaactcaggaccaggctttgatatcccaaagtcagtaaccttggactggagcttttcatcaagcaagatgtttgaagacttgacgtcacggtggataatggccttagtgtgaagatagtgcagtcccttggctgttcctatgcaaacctccacccgctgcttccaattgaggagcgagggtttaccagagccatacagatggctcatcagagaccctttttccatgtattcataaaccaagatcaattcattctcttcatcacagaacccaatcagagaaaccagatttcggtggttcagccctgacagtagttcaatctccgcttggaactccttctggccttgagaggactcaaggctccttcgtttcatggcaaactttttaccctccaactctcccacgtaaacctttccaaaacctccatgtccaacgacccgcgcttcatcaaaatagtttgttgcttgttgaagaagatggaagcgaaaggatcgcat
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| CDS seq | atgcgatcctttcgcttccatcttcttcaacaagcaacaaactattttgatgaagcgcgggtcgttggacatggaggttttggaaaggtttacgtgggagagttggagggtaaaaagtttgccatgaaacgaaggagccttgagtcctctcaaggccagaaggagttccaagcggagattgaactactgtcagggctgaaccaccgaaatctggtttctctgattgggttctgtgatgaagagaatgaattgatcttggtttatgaatacatggaaaaagggtctctgatgagccatctgtatggctctggtaaaccctcgctcctcaattggaagcagcgggtggaggtttgcataggaacagccaagggactgcactatcttcacactaaggccattatccaccgtgacgtcaagtcttcaaacatcttgcttgatgaaaagctccagtccaaggttactgactttgggatatcaaagcctggtcctgagttggaccaaacttatgtcatcactcaagtgaagggcagctttgggtatcttgatcctgaatattgcaagacgatgctgctcacccagaagtctgatgtctactcttttggtgttgtcttgcttgaggtcctatgtggcagaccagcgatcgaccaaacacttccgctcaaggaggtgaacttggcagactggggaaaggagatgctgaggaatggacagctggaacaaattgttgatcaggaaatttcaggcacagtcaaacagcgttctctgatgccatttggccaaattgtggccaggtgcctggaagacaagggagcggatcggccatcgatgggagacgtactcaggtacctggagtacgttcacagtttggaagccaagaagaatgccttaacacgatccgtagctatgatttgcgtgaaaatttcaaatgtagctgatggtttctccggcccatcgactccgcaccgggtgtctccagtcttggatgatagcattatcagtgtagctggaaattcagatgaacctgttcatgacatctctgctggaagctcagatgatgagactgaccatggtatctctgctggaaactcagatgagcatgatcataacgtctcttctcagctaataaaaccggggaaaagtaaagcattgattcgatctaatgctaaaattttcgaaagatatgaggatcctgaccatggggtctcttctgagctaataggaccggggaaacgtaaagcattgactcgatctgatgctaaaattttcgagagatga
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| Protein seq | MRSFRFHLLQQATNYFDEARVVGHGGFGKVYVGELEGKKFAMKRRSLESSQGQKEFQAEIELLSGLNHRNLVSLIGFCDEENELILVYEYMEKGSLMSHLYGSGKPSLLNWKQRVEVCIGTAKGLHYLHTKAIIHRDVKSSNILLDEKLQSKVTDFGISKPGPELDQTYVITQVKGSFGYLDPEYCKTMLLTQKSDVYSFGVVLLEVLCGRPAIDQTLPLKEVNLADWGKEMLRNGQLEQIVDQEISGTVKQRSLMPFGQIVARCLEDKGADRPSMGDVLRYLEYVHSLEAKKNALTRSVAMICVKISNVADGFSGPSTPHRVSPVLDDSIISVAGNSDEPVHDISAGSSDDETDHGISAGNSDEHDHNVSSQLIKPGKSKALIRSNAKIFERYEDPDHGVSSELIGPGKRKALTRSDAKIFER |
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| Function | Receptor-like protein kinase HERK 1 [UniProtKB/Swiss-Prot:Q9LX66] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_04g0010280 | OsLiXu_04g0010280.01 | Chr04 | 19296629 | 19297903 | - | NAM | ||
| CDS seq | atgcgatcctttcgcttccatcttcttcaacaagcaacaaactattttgatgaagcgcgggtcgttggacatggaggttttggaaaggtttacgtgggagagttggagggtaaaaagtttgccatgaaacgaaggagccttgagtcctctcaaggccagaaggagttccaagcggagattgaactactgtcagggctgaaccaccgaaatctggtttctctgattgggttctgtgatgaagagaatgaattgatcttggtttatgaatacatggaaaaagggtctctgatgagccatctgtatggctctggtaaaccctcgctcctcaattggaagcagcgggtggaggtttgcataggaacagccaagggactgcactatcttcacactaaggccattatccaccgtgacgtcaagtcttcaaacatcttgcttgatgaaaagctccagtccaaggttactgactttgggatatcaaagcctggtcctgagttggaccaaacttatgtcatcactcaagtgaagggcagctttgggtatcttgatcctgaatattgcaagacgatgctgctcacccagaagtctgatgtctactcttttggtgttgtcttgcttgaggtcctatgtggcagaccagcgatcgaccaaacacttccgctcaaggaggtgaacttggcagactggggaaaggagatgctgaggaatggacagctggaacaaattgttgatcaggaaatttcaggcacagtcaaacagcgttctctgatgccatttggccaaattgtggccaggtgcctggaagacaagggagcggatcggccatcgatgggagacgtactcaggtacctggagtacgttcacagtttggaagccaagaagaatgccttaacacgatccgtagctatgatttgcgtgaaaatttcaaatgtagctgatggtttctccggcccatcgactccgcaccgggtgtctccagtcttggatgatagcattatcagtgtagctggaaattcagatgaacctgttcatgacatctctgctggaagctcagatgatgagactgaccatggtatctctgctggaaactcagatgagcatgatcataacgtctcttctcagctaataaaaccggggaaaagtaaagcattgattcgatctaatgctaaaattttcgaaagatatgaggatcctgaccatggggtctcttctgagctaataggaccggggaaacgtaaagcattgactcgatctgatgctaaaattttcgagagatga
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| Protein seq | MRSFRFHLLQQATNYFDEARVVGHGGFGKVYVGELEGKKFAMKRRSLESSQGQKEFQAEIELLSGLNHRNLVSLIGFCDEENELILVYEYMEKGSLMSHLYGSGKPSLLNWKQRVEVCIGTAKGLHYLHTKAIIHRDVKSSNILLDEKLQSKVTDFGISKPGPELDQTYVITQVKGSFGYLDPEYCKTMLLTQKSDVYSFGVVLLEVLCGRPAIDQTLPLKEVNLADWGKEMLRNGQLEQIVDQEISGTVKQRSLMPFGQIVARCLEDKGADRPSMGDVLRYLEYVHSLEAKKNALTRSVAMICVKISNVADGFSGPSTPHRVSPVLDDSIISVAGNSDEPVHDISAGSSDDETDHGISAGNSDEHDHNVSSQLIKPGKSKALIRSNAKIFERYEDPDHGVSSELIGPGKRKALTRSDAKIFER
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0366000 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g29680 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0366000 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0009870 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0010600 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0010420 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0010010 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0010270 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0493100 | SBH | 3.2457925 | 28.794131 | 4.519752 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0009540 | RBH | 0.0 | 0.000000 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0279400 | SBH | 0.1624525 | 1.2799765 | 0.0684115 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0010550 | RBH | 0.0 | 0.095301 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0009730 | RBH | 0.0 | 2.369444 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0009780 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0010780 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G009300 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0009240 | SBH | 0.0 | 0.0 | 0.0 |
