Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_03g0019580 | OGI:03041040 | 7/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr03:16010419-16014134 | ||||||||
| Gene Symbol | RLCK106, OsRLCK106, RLCK110, OsRLCK110, PTK5, OsPTK5 | ||||||||||
| DNA seq | tcaggttcgacccaccttccctctcctcccgacaagccaaaccaatccctcccagatcccccaccctccagaaacaaagcgccaaatatcagtcagtttttctattttcccgggtttcccccatctcccatccaatgaatcaggttggagcatatttagttctctaccatccgaaatcattggtggcactgccaatgttttaggtagggactttgcgtagatttttcattggtaccaatatgccataatattcgtttcttcaattcgcttctgcctatcagtggaccttttggcttaatcttgtccgatccacaaggaaaaaaaagggttatcaccttatcgacgttcatcgtatacttcctctctcccaaaatgttactatctaatacgggatgtgatacatcctaataatacgaatttagagtagtaggatatatcctaatcagtactaggtagcaacatcttaggatggaggtagtatgtactccatccgttgcacgacctcggcaatcaccggcctgtccgtcggtatccatgcacagcaagccatggcgagctgcacgagctgtatcatcgcctcctcctgcagatcactggtctgttgcgtgagaagccgtgcgtcgatcaccttggccacctgctcgtgagggacagactgcacccactgcggaagattcacgccctcacggtgcaccactgcattcggtgggggctcccctgtgagcagctcgagcaggaggacaccgaagctgtacacgtccgcctcccgggagaccctccggttgtcgtcgtcgacctccggagcacggcacccacctgcgggagctgacgatgaggaggaggacgacgcgaggagagtcgggacgccgtgctctgacagcctcgcctcgtaggccttggtgagtaggacgttggatgatttgatgttgccgtggcaggagtttgctcccgccgagtgtatgatcgccaggctgcgtgccgcgctgagggcaatagttgaccgctgctcccagcccaagtcaggtcgttcagagacgctcgtgtatcctgaacatttaattagtttcacatgttcagtccggtggactaaggctgtgtttagttggggaaaaggaaatttttgggtgtcacatcatatgtttgaccggatgtcggaaggggttttcagacacgaatgaaaaaactaatttcagaactcgcctggaaaccgcgagacgaatcttttgagcctacttaagccgtcattagcacatgcgtgttactgtagcacttatggctaatcatggcctaattaggctcaaaagattcgtctcgcgatttatagctaaactgtgcaattggtttttctttttgtccatatttaatgctccatgcatgtgttcaaagattcgatgtgataggtgaagggaaaaatttttgggaactaaactggccctaagacaaataaatatccagatatataacacaagcctattaatccatttccttaatcttatagatcatcatatccatctgtctatctgttcgtctatctatactaagtactacatagacagatcctacaatttccaatataaataagagaaaaaatgaaatcagaaaatggccatcgatgcaggaaattcagttgacagtacgaaaacagaaagttcattcgtatacgaataggcgaaattaagagaaagaaaattatggaatcctatatacttatatagttcatccccactaagtgtagttaatgctatttctctcttctctcattaagccacatcaccccaattatttctagccattggatgatagatttatggttcaaattttctcttctttcctctcataacaccaagtaatctcaatcatttttaggcctcaaaattcataagtatcaatttgttttagttttaatattcatatttcatcttctttgtacatattatgcaacttaattttcggcagcaacgctgcggggtattcatctagtagtcattacatataataactttcaataaatgtagctagtttgttggtataaattcaagttagtgaactttcagcttgcttatgctcagtatatgactatcactttatccgtaattactgctgcttttttttttctaagagatccagcccaaggctaacccatccgccatggaattggctatcatttcatacggattcaatccagccccaagcctagccctactagtaggaattaaaaatagtagtcaactagactgacaaatagcaaacctgtatgtcaaatgcccatacgattgcattgttttaccacagagtaatagtgtaacgtaatcaataagtcaaatgtattactagtaaggaggcagatgtataataccgtgcagacgcagtgagaggctgcccatgggcatgttttcgtatattagaaacttctcatccttgctaaaatagtacccttccagtggcacgacgagctcactctcgatttccccgatcgccgccgcgacatgtcggaattcccactccggcaacgcctcacccctcaacctcttcaccaccagagtgtgtccggtctcccccagtttggccctgtacgtcgtaccgtacacgccattgccaagaacttcagccgatgcctgtagcaaatcctcaagatcaaattctggttgaagcatggccctcgtcgatcggaatttcacaaacttatcattgatagcctctggcttcggtgctggagctactggcctgtttttcattcgccaaaaaaacaggggattttcctctcgtcgttgaagagctttccttgcagttcgaagtctttctgccacatctgtcatctcaggacgtttgtgactatccatgctcaagcattggcctgctagcctcccaatcccatcaataatctttatgttattttggtctgcaatttctacatcaaacatgtctctcacctttctgtgcccttttgaaagtgattgggtgaacctatggacaaggctaacctccccactgtctgatctaaccttttttctagtgatcagttgtacaaggacaactccaaaactatagacatcgctttttgtggtgagacgaccactggaaacaaacaaagggtccatataaccaatgcttccgattacatgctgagtgtaaagtgtcttatccgtgtctactaatcttgatattccaaaatctgaaattttagcattaaggttgtgatccaaaagtatattagcaggtttgatatcgccatgaatgacctgtgtatacatatgtgaatgcatataaccaagtgcttgcgcacactctgtagcaatccttaatcgtgtgtctagacggattggatgatcactattatgaagaatgtcattgagatttccaccagatatatattcaataaccatcattaaggcatcttcctccaagcaataaccaatgagcctagttacattccggtggttgatttgagagtgaacaataagctcttttgcaaaggtctctttcatgttgtggtccttatggttaaatttcttgactgcaaccatacttttgtcctcgaggactccttggtaaacttttccgaaggcaccttgcccaatcatagttttgtactgtgatgtaattgcttccacctcactctgtgagaatcgttttatattatgactgctacgtgctgtccactttagttggtcatcctcatgtaataactctcttatattgccgtcttggacatccat
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| CDS seq | atggatgtccaagacggcaatataagagagttattacatgaggatgaccaactaaagtggacagcacgtagcagtcataatataaaacgattctcacagagtgaggtggaagcaattacatcacagtacaaaactatgattgggcaaggtgccttcggaaaagtttaccaaggagtcctcgaggacaaaagtatggttgcagtcaagaaatttaaccataaggaccacaacatgaaagagacctttgcaaaagagcttattgttcactctcaaatcaaccaccggaatgtaactaggctcattggttattgcttggaggaagatgccttaatgatggttattgaatatatatctggtggaaatctcaatgacattcttcataatagtgatcatccaatccgtctagacacacgattaaggattgctacagagtgtgcgcaagcacttggttatatgcattcacatatgtatacacaggtcattcatggcgatatcaaacctgctaatatacttttggatcacaaccttaatgctaaaatttcagattttggaatatcaagattagtagacacggataagacactttacactcagcatgtaatcggaagcattggttatatggaccctttgtttgtttccagtggtcgtctcaccacaaaaagcgatgtctatagttttggagttgtccttgtacaactgatcactagaaaaaaggttagatcagacagtggggaggttagccttgtccataggttcacccaatcactttcaaaagggcacagaaaggtgagagacatgtttgatgtagaaattgcagaccaaaataacataaagattattgatgggattgggaggctagcaggccaatgcttgagcatggatagtcacaaacgtcctgagatgacagatgtggcagaaagacttcgaactgcaaggaaagctcttcaacgacgagaggaaaatcccctgtttttttggcgaatgaaaaacaggccagtagctccagcaccgaagccagaggctatcaatgataagtttgtgaaattccgatcgacgagggccatgcttcaaccagaatttgatcttgaggatttgctacaggcatcggctgaagttcttggcaatggcgtgtacggtacgacgtacagggccaaactgggggagaccggacacactctggtggtgaagaggttgaggggtgaggcgttgccggagtgggaattccgacatgtcgcggcggcgatcggggaaatcgagagtgagctcgtcgtgccactggaagggtactattttagcaaggatgagaacgcggcacgcagcctggcgatcatacactcggcgggagcaaactcctgccacggcaacatcaaatcatccaacgtcctactcaccaaggcctacgaggcgaggctgtcagagcacggcgtcccgactctcctcgcgtcgtcctcctcctcatcgtcagctcccgcaggtgggtgccgtgctccggaggtcgacgacgacaaccggagggtctcccgggaggcggacgtgtacagcttcggtgtcctcctgctcgagctgctcacaggggagcccccaccgaatgcagtggtgcaccgtgagggcgtgaatcttccgcagtgggtgcagtctgtccctcacgagcaggtggccaaggtgatcgacgcacggcttctcacgcaacagaccagtgatctgcaggaggaggcgatgatacagctcgtgcagctcgccatggcttgctggtgggggatctgggagggattggtttggcttgtcgggaggagagggaaggtgggtcgaacctga
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| Protein seq | MDVQDGNIRELLHEDDQLKWTARSSHNIKRFSQSEVEAITSQYKTMIGQGAFGKVYQGVLEDKSMVAVKKFNHKDHNMKETFAKELIVHSQINHRNVTRLIGYCLEEDALMMVIEYISGGNLNDILHNSDHPIRLDTRLRIATECAQALGYMHSHMYTQVIHGDIKPANILLDHNLNAKISDFGISRLVDTDKTLYTQHVIGSIGYMDPLFVSSGRLTTKSDVYSFGVVLVQLITRKKVRSDSGEVSLVHRFTQSLSKGHRKVRDMFDVEIADQNNIKIIDGIGRLAGQCLSMDSHKRPEMTDVAERLRTARKALQRREENPLFFWRMKNRPVAPAPKPEAINDKFVKFRSTRAMLQPEFDLEDLLQASAEVLGNGVYGTTYRAKLGETGHTLVVKRLRGEALPEWEFRHVAAAIGEIESELVVPLEGYYFSKDENAARSLAIIHSAGANSCHGNIKSSNVLLTKAYEARLSEHGVPTLLASSSSSSSAPAGGCRAPEVDDDNRRVSREADVYSFGVLLLELLTGEPPPNAVVHREGVNLPQWVQSVPHEQVAKVIDARLLTQQTSDLQEEAMIQLVQLAMACWWGIWEGLVWLVGRRGKVGRT |
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| Function | Wall-associated receptor kinase-like 3 [UniProtKB/Swiss-Prot:Q9S9M3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_03g0019580 | OsLiXu_03g0019580.01 | Chr03 | 16010419 | 16014134 | - | NAM | ||
| CDS seq | atggatgtccaagacggcaatataagagagttattacatgaggatgaccaactaaagtggacagcacgtagcagtcataatataaaacgattctcacagagtgaggtggaagcaattacatcacagtacaaaactatgattgggcaaggtgccttcggaaaagtttaccaaggagtcctcgaggacaaaagtatggttgcagtcaagaaatttaaccataaggaccacaacatgaaagagacctttgcaaaagagcttattgttcactctcaaatcaaccaccggaatgtaactaggctcattggttattgcttggaggaagatgccttaatgatggttattgaatatatatctggtggaaatctcaatgacattcttcataatagtgatcatccaatccgtctagacacacgattaaggattgctacagagtgtgcgcaagcacttggttatatgcattcacatatgtatacacaggtcattcatggcgatatcaaacctgctaatatacttttggatcacaaccttaatgctaaaatttcagattttggaatatcaagattagtagacacggataagacactttacactcagcatgtaatcggaagcattggttatatggaccctttgtttgtttccagtggtcgtctcaccacaaaaagcgatgtctatagttttggagttgtccttgtacaactgatcactagaaaaaaggttagatcagacagtggggaggttagccttgtccataggttcacccaatcactttcaaaagggcacagaaaggtgagagacatgtttgatgtagaaattgcagaccaaaataacataaagattattgatgggattgggaggctagcaggccaatgcttgagcatggatagtcacaaacgtcctgagatgacagatgtggcagaaagacttcgaactgcaaggaaagctcttcaacgacgagaggaaaatcccctgtttttttggcgaatgaaaaacaggccagtagctccagcaccgaagccagaggctatcaatgataagtttgtgaaattccgatcgacgagggccatgcttcaaccagaatttgatcttgaggatttgctacaggcatcggctgaagttcttggcaatggcgtgtacggtacgacgtacagggccaaactgggggagaccggacacactctggtggtgaagaggttgaggggtgaggcgttgccggagtgggaattccgacatgtcgcggcggcgatcggggaaatcgagagtgagctcgtcgtgccactggaagggtactattttagcaaggatgagaacgcggcacgcagcctggcgatcatacactcggcgggagcaaactcctgccacggcaacatcaaatcatccaacgtcctactcaccaaggcctacgaggcgaggctgtcagagcacggcgtcccgactctcctcgcgtcgtcctcctcctcatcgtcagctcccgcaggtgggtgccgtgctccggaggtcgacgacgacaaccggagggtctcccgggaggcggacgtgtacagcttcggtgtcctcctgctcgagctgctcacaggggagcccccaccgaatgcagtggtgcaccgtgagggcgtgaatcttccgcagtgggtgcagtctgtccctcacgagcaggtggccaaggtgatcgacgcacggcttctcacgcaacagaccagtgatctgcaggaggaggcgatgatacagctcgtgcagctcgccatggcttgctggtgggggatctgggagggattggtttggcttgtcgggaggagagggaaggtgggtcgaacctga
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| Protein seq | MDVQDGNIRELLHEDDQLKWTARSSHNIKRFSQSEVEAITSQYKTMIGQGAFGKVYQGVLEDKSMVAVKKFNHKDHNMKETFAKELIVHSQINHRNVTRLIGYCLEEDALMMVIEYISGGNLNDILHNSDHPIRLDTRLRIATECAQALGYMHSHMYTQVIHGDIKPANILLDHNLNAKISDFGISRLVDTDKTLYTQHVIGSIGYMDPLFVSSGRLTTKSDVYSFGVVLVQLITRKKVRSDSGEVSLVHRFTQSLSKGHRKVRDMFDVEIADQNNIKIIDGIGRLAGQCLSMDSHKRPEMTDVAERLRTARKALQRREENPLFFWRMKNRPVAPAPKPEAINDKFVKFRSTRAMLQPEFDLEDLLQASAEVLGNGVYGTTYRAKLGETGHTLVVKRLRGEALPEWEFRHVAAAIGEIESELVVPLEGYYFSKDENAARSLAIIHSAGANSCHGNIKSSNVLLTKAYEARLSEHGVPTLLASSSSSSSAPAGGCRAPEVDDDNRRVSREADVYSFGVLLLELLTGEPPPNAVVHREGVNLPQWVQSVPHEQVAKVIDARLLTQQTSDLQEEAMIQLVQLAMACWWGIWEGLVWLVGRRGKVGRT
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.057787 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0712400 | SBH | 0.857071 | 0.867786 | 8.648502 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g29410 | SBH | 0.087867 | 0.089621 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0712400 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0013410 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0013220 | SBH | 0.0 | 0.0 | 0.376228 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0013250 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0013220 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0019600 | RBH | 0.000000 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0276700 | SBH | 0.669144 | 43.379124 | 0.017972 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0019460 | RBH | 0.0 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0253600 | RBH | 0.7625525 | 4.6170365 | 1.8087185 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0013140 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0019640 | RBH | 0.0 | 6.107849 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0019710 | RBH | 0.000000 | 5.867169 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0024730 | SBH | 0.0 | 0.145317 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0019490 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G027210 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0027210 | SBH | 0.0 | 0.0 | 0.000000 |
