Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_03g0027210 | OGI:03070740 | 15/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr03:27036277-27037443 | ||||||||
| Gene Symbol | RLCK110, OsRLCK110, PTK5, OsPTK5, WAK27, OsWAK27, OsRLCK114, RLCK114 | ||||||||||
| DNA seq | tcagcgtgcaaggtcgttcacactcagcgtcagcggcatcttgtcagtctccgtgctctggtaagaagccgtcgtgttcgtgtccaaatggccgcgccccactgCTCctcctcctcctcctccacacatgatccagctgcgatccacctcgccaccgttgctgtcccttccagctccggccaccgcccgcatctcggctcgccgcctcagcacctgcagccgctccgccacctccttcatcgccggcctctcgtccccgctcgggcccaggcaccgcgccgcgagctccgcgagctcacggaccacgtccacggccgccttgtcgtcgccgtcgccgtcgtcatcggggcgcctcacgagctcgcggtccagcactttccagagctcgccgtgcctgagcgcggcgaggaacgcggtggacagagaccgcttctggcccccgtggccggagccggaggcgtcgtcgtcgtcgtacaccgccttcctccgggtggcgagctccgcgaggacgacgccgaagctgtacacgtcgctcttgtcggtgaggtggcggctgacgaagctctccgggtcgaggtagcccagggtgccctgaacgtactcgatgaacgactcgccctcgcccatggcggacctcagcgccgacgcgccgaagtcggcgaccttggcgtcgagcgcaccgtcgagcaggatgttaagggacttgacgtcgccgtggaggatcgcgcgcgacgccgacgagtgcaggtacgccagcgcctccgcggactgcgccgcgatcttcagccggaggcccagcgacaccggccggcgccgcgccgccgtcccgccgtggaggagctcgaacagggtgccattggggacgaactcgtacaccagcatcgggacgtgcacctccaggcagcagccgagcagccgcacgacgtggcggtggttgatctgcgagagcacgatgatctcgttgacgaactcatcctcgcagccgccgccgtcgaccgccgccttggacctcttgatggcgacctcccggagatcgtcgagcgtgCcccggtacaccgtgccgtggccgccgcaaccgatgacctgatcgtcgctgaagttgttggtggctttcttgagctcgtcttcggtgaggacgcgcaccgtgtcgacctgcctcgacaccat
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| CDS seq | atggtgtcgaggcaggtcgacacggtgcgcgtcctcaccgaagacgagctcaagaaagccaccaacaacttcagcgacgatcaggtcatcggttgcggcggccacggcacggtgtaccgggGcacgctcgacgatctccgggaggtcgccatcaagaggtccaaggcggcggtcgacggcggcggctgcgaggatgagttcgtcaacgagatcatcgtgctctcgcagatcaaccaccgccacgtcgtgcggctgctcggctgctgcctggaggtgcacgtcccgatgctggtgtacgagttcgtccccaatggcaccctgttcgagctcctccacggcgggacggcggcgcggcgccggccggtgtcgctgggcctccggctgaagatcgcggcgcagtccgcggaggcgctggcgtacctgcactcgtcggcgtcgcgcgcgatcctccacggcgacgtcaagtcccttaacatcctgctcgacggtgcgctcgacgccaaggtcgccgacttcggcgcgtcggcgctgaggtccgccatgggcgagggcgagtcgttcatcgagtacgttcagggcaccctgggctacctcgacccggagagcttcgtcagccgccacctcaccgacaagagcgacgtgtacagcttcggcgtcgtcctcgcggagctcgccacccggaggaaggcggtgtacgacgacgacgacgcctccggctccggccacgggggccagaagcggtctctgtccaccgcgttcctcgccgcgctcaggcacggcgagctctggaaagtgctggaccgcgagctcgtgaggcgccccgatgacgacggcgacggcgacgacaaggcggccgtggacgtggtccgtgagctcgcggagctcgcggcgcggtgcctgggcccgagcggggacgagaggccggcgatgaaggaggtggcggagcggctgcaggtgctgaggcggcgagccgagatgcgggcggtggccggagctggaagggacagcaacggtggcgaggtggatcgcagctggatcatgtgtggaggaggaggaggagGAGcagtggggcgcggccatttggacacgaacacgacggcttcttaccagagcacggagactgacaagatgccgctgacgctgagtgtgaacgaccttgcacgctga
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| Protein seq | MVSRQVDTVRVLTEDELKKATNNFSDDQVIGCGGHGTVYRGTLDDLREVAIKRSKAAVDGGGCEDEFVNEIIVLSQINHRHVVRLLGCCLEVHVPMLVYEFVPNGTLFELLHGGTAARRRPVSLGLRLKIAAQSAEALAYLHSSASRAILHGDVKSLNILLDGALDAKVADFGASALRSAMGEGESFIEYVQGTLGYLDPESFVSRHLTDKSDVYSFGVVLAELATRRKAVYDDDDASGSGHGGQKRSLSTAFLAALRHGELWKVLDRELVRRPDDDGDGDDKAAVDVVRELAELAARCLGPSGDERPAMKEVAERLQVLRRRAEMRAVAGAGRDSNGGEVDRSWIMCGGGGGGAVGRGHLDTNTTASYQSTETDKMPLTLSVNDLAR |
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| Function | Wall-associated receptor kinase-like 9 [UniProtKB/Swiss-Prot:Q9C9L5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_03g0027210 | OsNaBo_03g0027210.01 | Chr03 | 27036277 | 27037443 | - | NAM | ||
| CDS seq | atggtgtcgaggcaggtcgacacggtgcgcgtcctcaccgaagacgagctcaagaaagccaccaacaacttcagcgacgatcaggtcatcggttgcggcggccacggcacggtgtaccgggGcacgctcgacgatctccgggaggtcgccatcaagaggtccaaggcggcggtcgacggcggcggctgcgaggatgagttcgtcaacgagatcatcgtgctctcgcagatcaaccaccgccacgtcgtgcggctgctcggctgctgcctggaggtgcacgtcccgatgctggtgtacgagttcgtccccaatggcaccctgttcgagctcctccacggcgggacggcggcgcggcgccggccggtgtcgctgggcctccggctgaagatcgcggcgcagtccgcggaggcgctggcgtacctgcactcgtcggcgtcgcgcgcgatcctccacggcgacgtcaagtcccttaacatcctgctcgacggtgcgctcgacgccaaggtcgccgacttcggcgcgtcggcgctgaggtccgccatgggcgagggcgagtcgttcatcgagtacgttcagggcaccctgggctacctcgacccggagagcttcgtcagccgccacctcaccgacaagagcgacgtgtacagcttcggcgtcgtcctcgcggagctcgccacccggaggaaggcggtgtacgacgacgacgacgcctccggctccggccacgggggccagaagcggtctctgtccaccgcgttcctcgccgcgctcaggcacggcgagctctggaaagtgctggaccgcgagctcgtgaggcgccccgatgacgacggcgacggcgacgacaaggcggccgtggacgtggtccgtgagctcgcggagctcgcggcgcggtgcctgggcccgagcggggacgagaggccggcgatgaaggaggtggcggagcggctgcaggtgctgaggcggcgagccgagatgcgggcggtggccggagctggaagggacagcaacggtggcgaggtggatcgcagctggatcatgtgtggaggaggaggaggagGAGcagtggggcgcggccatttggacacgaacacgacggcttcttaccagagcacggagactgacaagatgccgctgacgctgagtgtgaacgaccttgcacgctga
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| Protein seq | MVSRQVDTVRVLTEDELKKATNNFSDDQVIGCGGHGTVYRGTLDDLREVAIKRSKAAVDGGGCEDEFVNEIIVLSQINHRHVVRLLGCCLEVHVPMLVYEFVPNGTLFELLHGGTAARRRPVSLGLRLKIAAQSAEALAYLHSSASRAILHGDVKSLNILLDGALDAKVADFGASALRSAMGEGESFIEYVQGTLGYLDPESFVSRHLTDKSDVYSFGVVLAELATRRKAVYDDDDASGSGHGGQKRSLSTAFLAALRHGELWKVLDRELVRRPDDDGDGDDKAAVDVVRELAELAARCLGPSGDERPAMKEVAERLQVLRRRAEMRAVAGAGRDSNGGEVDRSWIMCGGGGGGAVGRGHLDTNTTASYQSTETDKMPLTLSVNDLAR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0642600 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g44050 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0642600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0027770 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0027510 | RBH | 0.000000 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0027580 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0027600 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0027370 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0432300 | SBH | 0.2319095 | 0.805307 | 0.1497165 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0027140 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0434600 | RBH | 0.015542 | 0.496651 | 0.090519 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0027410 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0027440 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0027520 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0027250 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0027220 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G027210 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0019980 | RBH | 0.444163 | 1.538679 | 0.734204 |
