Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_01g0008810 | OGI:01021950 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr01:7079826-7087163 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | aggaggagccttccgccgtcgccgcgggggctcccgctgctcggccacctccacctgctcggcgcgctgccgcaccgggcgctccggtccctcgccgcggcgcacggcccggtgctgctgctgcggctcggacgcgttcccgtggtggtcgtgtcgtcggcggccgccgccgaggaggtgatgcgggcgcgcgacgtggcgttcgcgagccggcccagggtcgccatggccgagcggctgctctacggcggccgcgacgtcgcgttcgcgccctacggcgagtactggcgccaggcgcgccgcatctgcgtcgtacacctcctcagcgcgcgccgcgtgctgtccttccgccgcgtcagggaggaggaggccgccgcgctcgtcgcccgcgtccgcgccgccgcgggcggcgccgtcgatttggtcgagcacctcaccgcctactccaacaccgtcgtctcccgcgccgtgttcggcgacgagagcgcgcgcggcttgtacggcgacgtcgacagggggcgcgcgctgaggaagctgttcgacgacttcgtggagctactcgggcaagagccgatgggggagctcctgccatggctcgggtgggtggacgctgtcagggggctggacgggaaggtgcagcgcacgtttgaggcgctggacagcatcatcgagaaggtgatcgacgatcaccgtcgccgccggcgccgccgtgaagtcggcaggcagatggacagcgacgacgacggtggcggcggcggcgatcaccgggatttcgtggacgtcttactcgacgtgaacgagacagacaaggacgcaggcattcgtctcggcacgatcgaaatcaaggccattatcctggtatggaactatggattaagcacgatagtttcattgaaacatatatatgcaattatgcacccccccatatacttgattgtttctggcgtcgacgcggacgcgggacgcgagcaggacatgttcgcggcgggcacggacaccacgacgacggcgatggaatgggccatggcagagctgatcacccaccggaacgcaatgcacaaggtgcaggacgagatcagggcggtcgtcggcgtcacaggatgcgtcacggaggaccacattgacaggctgccttacctcaaggccgtgctcaaggagacgctccggctacacccaccaaacccactgctcgtgccgcacgtaccattagcagacaccgagatcctaggctacacggtcccgacgcacacccgggtattgatcaacgcgtggaccatcggccgcgacccggcgacatggggagagcacgctgagaagttcataccagagaggttccttaacaacaacgtggactacaaggggcaggactttgggctagtcccgttcggtgccggtaggagggggtgccctgggatggggttcgctgtgccgaccatagagatggcattggcaagcttattgtacaatttcagctgggagacgagaccggtggataggaggtgcaaatcgggcacgtcatcgctagacatgagcgaggtgaacgggatttccgtgcatctcaagtatggtctgcctctcatggctaaatcgtacttttcttaatgtaaaagggactataagtatttatgctgctgcaattttaagtaaagaaaacagtcaaaatgttcaacatgaatttcacaataaaatctcaccatgctatattgtagattccatgtattttcgtgtttacactataatgttcttggaaaaagggagagaacaaaatgaaagggaaaaaaggagagaaggaaaagggaaaagagaagaaaataaatttcttaagtgagttctatttgttagactatagacgggtaagttaatgacgatgccacaccagtatttgtgtggcatatgccacggaaacgccacgtaagatttcaaaagagattatggcaattgggggccagaataatacaatttaacagttatgggaaatagatttatactttaagagtatatatggagacctgtatgattcaagagatcaagtttcttgttcggaccggctatttaatttactaatttaaaaaatatttttaaaataaccttatcagagaagtggaaacaaagatcctcactctccctcagatgctcggggcactgcgggaactgccatggtcaaaataagaaaaagcttagggataaaagcgttgtcccgagcagtgttgtggaaaacggatagtacggccgttaatacgtccgttaattcggaaacggtgagcaatccgtcacgacatggtgatacggccttcattacttggtaaagaacgcgtaaaccccataattagcgactaatcggacgttttctgattaatcggccgtataatcaccgttattacatggcccagcccacaacaacccaacccattattgtgttctgtggtatgtagctgtatatttgcccttccgaatttcccgcaactcacagcaacatgttctttccatctaatcctctaccaaatgtaatacgatatccaagattttatgttaatcttttgtttaaatttcaaataggtctcaagaaaaaaaatctcaaatatatatgaagttaatgtattttcctctcctaaaaaggcaaactattatcaactaggtacatatatttgtacaaacgttaaatttccattaaattccgattaatcgaccgtattccgattaattgtttggcggtaccctctccatctgacatccgcataccgtcttccacaacactggtcccgagctgataaagacgacccatcttatcttaagaatccatttgagagagacaggaggaagaagagtgcaaaatacatgctatatatcatcactagtcgtcagtatcatacaaaaattccatctctctgtaatggggaaaaattatatgttcaccgctgcatgtacattttcggtcccatttccatttccatcacacactactacaaaatcgattatttttacgagacccttttatgttacagacggattataactgcccccacatgtgaaaatcactccctaaatgacggtttaagaaccgcctgtattttcgtggaacatggcctcttatgaaaatcaatttttctttcatacagacgttctctcctctgcctgcagttcatgcaaccgctacccttcacttaaTtttttttttttttgcccacgtatccatcctctccgcctcttccatttttccttctctcgtccgcatccacgtccatgcatcttcttcactttcctctcctccttcctccgcttcccagcggagacggcggccacgacgacgggcagatccaccgtccccaccttgagtacgtacggatccacaacaacgctggtgcttaactcggcacgatcgaaaacaagaccgctatactagtacgtacgaatcgagcatacatgctactccctcagtttcatattatataagtcacctcgatttttttttcataatctttctttgcaaactactccctctgttttttaattgatgacgccgttgactttttctcacatgtttgaccattcgtcttattcaaaaaatttacgtaattataatttgttttgttatgagttgttttatcattcataatactttaagtgtgatttatatcttatatatttgcatcaaatttttgaataagacgaatgatcaaacatatgagaaaaagttaactgcgtcatctattaaaaaacggagaaagtatatcttaaaagtgtaatttgtccattcttaaagggcttctttgtaatactggatgtatccctatccagatctgtgctagatgcattgtgaccactcatgtaatctaacttagttgtatccataaaggcatgtgttttcttAaaaaaaaaatcgggatgtaaattgagaaaactatttggattaattgataaaacatcggattcatcgatcgagctagctagcttaactgtttgaatctaggcctcacaaatccatggaagaaagcaaccacgtacgctagttaatcgccatcgatccatctgccggaacaaatcgcgctctcgcgcgcaaattagaatgctgcaccgtccccgatccgcgggcggtcgcgcactcgcgcgagatggtgccgtgccgcaccccgtctcttccgtcgctctagtgtcatcaagcacaattagtagttaattagttggagtaatagtttttaattagcataattagctattacctctattttttaatacttcctcctaccctaaatgtttgatgctgttgacttttttaaacatatttgaccgtttatcttattcaaaaacttttgtaaaatgtgtaaaactatatgtatatataaaaaatatatttaacaataaatcaaatgataggaacaaattaataattacaacggcgtcaaatattttgggatggagggagtatatgatatcgttaattttttaacaaacattttaccattcatcttattcaatatctttatacaaatataaaaaataaattatagtcaaataacatttgacgataaattaagtaacaattaaataaatgataattacataaatttttgaaataatatgaacggtcaaacgtatatcacaaagtcaacaacgttaacgttatatattaagatacaaaggagtattagttaactactaatttaggataagacaacaagttcgctacgcataacgcgctagttcgcagcgaccacaggcgtgactatgagttcgcttctttatccacgatgatggtatatttttttcaattcttttcaaatgtatatattcatgtaaaactgataaaaaaaagtatattttcaaaatgtttttcatcttccagctacgcgccggtggcggtgacgtgtcccaacccatgaccacgaggtatgtatattttcgcaaatatttcaaaaacacgaatgtctatgtaaaatcctaagagttaatgtatatctcaaaatgtaattcctcaacattatcacttgtcactttctccgctttgttaggctacaataatgtaatgcgagtgctggcctatcttttccatacaccctacaaccaagcaaacaaacgctttgctgtcgctttgctgttgcacgcacgagcgcaaagccgcaaacaatggccgtctcgctcctcgtcgtcctccttgtagtcctcgccatcgtcgtaccgctcctgtacctcgtgctgcttccagccgggaacacgacgagaaatggcgctgcgaggtgggaggacgacggtggtgatggccggcgccgccggaggctgccgccgtcgccgcgggggctcccgctgctcggccacctccacctgctcggcgcgctgccgcaccgggcactgcggtccctcgccgcggcgcacggcccggtgctgctgctgcggctcggccgcgttcccgtggtggtcgtgtcgtcggcggccgcggccgaggaggtgatgcggtcgcgggacgtggagttcgcgagccggcccaggatggccatggccgagctgctgctctacggcggccgcgacgtcgcgttcgcgccctacggcgagtactggcgccaggcgccccgcatctgcgtggtccacctcctcagcgcgcgccgcgtcctcttgttccgccgcgtcagggaggaggaggccgccgcgctcgtcggccgcgtccgcgccgccgccgccgacgtcgtcgacctgtccgacctcctcatcgcttactccaacaccgtcttgacgcgcatcgcgttcggcgacgagagcgcgcgcggcggcggcggcggcgacagggggcgcgagctgaggaaggtgttcgacgacttcgcgaggttgctcgggacggagccgatgggggagctcttgccatggttctggtgggtggacgccttgagggggatagacgggaaggtgcagcgcacgtttgaggcgctggacggcatcctcgagagggtgatcgacgatcaccgtcgccgccgtgaaggcggccggcgtatggacgacgacggcggcggcgatcaccgggatttcgtggacgtgttgctcgacgtgaacgagacggacaaggacgctggcattcagctcggcaccgtcgaaatcaaggctattatcatggtatgaatcgagctatagtctagttggaatactagcactccttagtccaaaggttttaaaactctgatcgtcatgttatcttggaacaattttataatattaaataggtgtaattgtagtgatttttaaggtaattgtatgcaaaatatgtttcttgtttcaaactaggcaataaaaaattattaatgatcaaagttttaaaagattaacaaaattttattctaaatatcacatatttatgacaaaagtgaatactgaatattaatatagctgatagggcaattttaccatattaaaacagtgtcgggaggtatcgtatttattagtataaaatttagtacctccaggtattaattaattaggtatcaaaaaattttagtgcaaaatttagataccttgaggttaaggtactgtgaaatttccgtagctgatatgcttcttgcttcacggacacgagcaggacatgtttgtagggggctcagacactacgaccacgatgatggcatggaccatggccgagctgatcaaccacccacgcgccatgcacaaaacgcagaacgagatccgggcagtcgtgggcaacactagtcatgtcaccaaggaccacgtggacaagctgccctacctcaaggctgttttcaaggagacgctccgactacacccaccactcccgctcctcatcccacgagagccaccggcggatgcccagatcctgggttacaccataccggcgcacacgcgggtggtgatcaacgcgtgggccatcggccgagacccggcagcatgggggcagcaaccggacaagttctcaccggagaaattcctcaacggcgccattgactacaagggacaggacttcgagctgctaccatttggcgccggtaggagggggtgccccgggatcgtgttcggggtgtcagccatggagatagcactcgcgagcttgctctaccattttgactgggaggcggcggcaactgatcacaggaggaggggcagccaagcatgggcgttgccagtggacatgagtgaggtcaatgggatagctgttcatctcaagtatgttctacatgtcgtcgctaaaccacgtatgccttaactttagaaaagatgttaccatctgcagttcaactgataggaccctggttatgtattggttgattaacttttgaggatatgggatatcctatcaatgtagacctcactcgaggagattgaatcgataatgtggaacacaactac
More
|
||||||||||
| CDS seq | atgcgggcgcgcgacgtggcgttcgcgagccggcccagggtcgccatggccgagcggctgctctacggcggccgcgacgtcgcgttcgcgccctacggcgagtactggcgccaggcgcgccgcatctgcgtcgtacacctcctcagcgcgcgccgcgtgctgtccttccgccgcgtcagggaggaggaggccgccgcgctcgtcgcccgcgtccgcgccgccgcgggcggcgccgtcgatttggtcgagcacctcaccgcctactccaacaccgtcgtctcccgcgccgtgttcggcgacgagagcgcgcgcggcttgtacggcgacgtcgacagggggcgcgcgctgaggaagctgttcgacgacttcgtggagctactcgggcaagagccgatgggggagctcctgccatggctcgggtgggtggacgctgtcagggggctggacgggaaggtgcagcgcacgtttgaggcgctggacagcatcatcgagaaggtgatcgacgatcaccgtcgccgccggcgccgccgtgaagtcggcaggcagatggacagcgacgacgacggtggcggcggcggcgatcaccgggatttcgtggacgtcttactcgacgtgaacgagacagacaaggacgcaggcattcgtctcggcacgatcgaaatcaaggccattatcctggacatgttcgcggcgggcacggacaccacgacgacggcgatggaatgggccatggcagagctgatcacccaccggaacgcaatgcacaaggtgcaggacgagatcagggcggtcgtcggcgtcacaggatgcgtcacggaggaccacattgacaggctgccttacctcaaggccgtgctcaaggagacgctccggctacacccaccaaacccactgctcgtgccgcacgtaccattagcagacaccgagatcctaggctacacggtcccgacgcacacccgggtattgatcaacgcgtggaccatcggccgcgacccggcgacatggggagagcacgctgagaagttcataccagagaggttccttaacaacaacgtggactacaaggggcaggactttgggctagtcccgttcggtgccggtaggagggggtgccctgggatggggttcgctgtgccgaccatagagatggcattggcaagcttattgtacaatttcagctgggagacgagaccggtggataggaggtgcaaatcgggcacgtcatcgctagacatgagcgaggtgaacgggatttccgtgcatctcaagtatgtcctcgccatcgtcgtaccgctcctgtacctcgtgctgcttccagccgggaacacgacgagaaatggcgctgcgaggtgggaggacgacggtggtgatggccggcgccgccggaggctgccgccgtcgccgcgggggctcccgctgctcggccacctccacctgctcggcgcgctgccgcaccgggcactgcggtccctcgccgcggcgcacggcccggtgctgctgctgcggctcggccgcgttcccgtggtggtcgtgtcgtcggcggccgcggccgaggaggtgatgcggtcgcgggacgtggagttcgcgagccggcccaggatggccatggccgagctgctgctctacggcggccgcgacgtcgcgttcgcgccctacggcgagtactggcgccaggcgccccgcatctgcgtggtccacctcctcagcgcgcgccgcgtcctcttgttccgccgcgtcagggaggaggaggccgccgcgctcgtcggccgcgtccgcgccgccgccgccgacgtcgtcgacctgtccgacctcctcatcgcttactccaacaccgtcttgacgcgcatcgcgttcggcgacgagagcgcgcgcggcggcggcggcggcgacagggggcgcgagctgaggaaggtgttcgacgacttcgcgaggttgctcgggacggagccgatgggggagctcttgccatggttctggtgggtggacgccttgagggggatagacgggaaggtgcagcgcacgtttgaggcgctggacggcatcctcgagagggtgatcgacgatcaccgtcgccgccgtgaaggcggccggcgtatggacgacgacggcggcggcgatcaccgggatttcgtggacgtgttgctcgacgtgaacgagacggacaaggacgctggcattcagctcggcaccctgatcaaccacccacgcgccatgcacaaaacgcagaacgagatccgggcagtcgtgggcaacactagtcatgtcaccaaggaccacgtggacaagctgccctacctcaaggctgttttcaaggagacgctccgactacacccaccactcccgctcctcatcccacgagagccaccggcggatgcccagatcctgggttacaccataccggcgcacacgcgggtggtgatcaacgcgtgggccatcggccgagacccggcagcatgggggcagcaaccggacaagttctcaccggagaaattcctcaacggcgccattgactacaagggacaggacttcgagctgctaccatttggcgccggtaggagggggtgccccgggatcgtgttcggggtgtcagccatggagatagcactcgcgagcttgctctaccattttgactgggaggcggcggcaactgatcacaggaggaggggcagccaagcatgggcgttgccagtggacatgagtgaggtcaatgggatagctgttcatctcaagtatgttctacatgtcgtcgctaaaccacgtatgccttaa
More
|
||||||||||
| Protein seq | MRARDVAFASRPRVAMAERLLYGGRDVAFAPYGEYWRQARRICVVHLLSARRVLSFRRVREEEAAALVARVRAAAGGAVDLVEHLTAYSNTVVSRAVFGDESARGLYGDVDRGRALRKLFDDFVELLGQEPMGELLPWLGWVDAVRGLDGKVQRTFEALDSIIEKVIDDHRRRRRRREVGRQMDSDDDGGGGGDHRDFVDVLLDVNETDKDAGIRLGTIEIKAIILDMFAAGTDTTTTAMEWAMAELITHRNAMHKVQDEIRAVVGVTGCVTEDHIDRLPYLKAVLKETLRLHPPNPLLVPHVPLADTEILGYTVPTHTRVLINAWTIGRDPATWGEHAEKFIPERFLNNNVDYKGQDFGLVPFGAGRRGCPGMGFAVPTIEMALASLLYNFSWETRPVDRRCKSGTSSLDMSEVNGISVHLKYVLAIVVPLLYLVLLPAGNTTRNGAARWEDDGGDGRRRRRLPPSPRGLPLLGHLHLLGALPHRALRSLAAAHGPVLLLRLGRVPVVVVSSAAAAEEVMRSRDVEFASRPRMAMAELLLYGGRDVAFAPYGEYWRQAPRICVVHLLSARRVLLFRRVREEEAAALVGRVRAAAADVVDLSDLLIAYSNTVLTRIAFGDESARGGGGGDRGRELRKVFDDFARLLGTEPMGELLPWFWWVDALRGIDGKVQRTFEALDGILERVIDDHRRRREGGRRMDDDGGGDHRDFVDVLLDVNETDKDAGIQLGTLINHPRAMHKTQNEIRAVVGNTSHVTKDHVDKLPYLKAVFKETLRLHPPLPLLIPREPPADAQILGYTIPAHTRVVINAWAIGRDPAAWGQQPDKFSPEKFLNGAIDYKGQDFELLPFGAGRRGCPGIVFGVSAMEIALASLLYHFDWEAAATDHRRRGSQAWALPVDMSEVNGIAVHLKYVLHVVAKPRMP |
||||||||||
| Function | Cytochrome P450 736A117 [UniProtKB/Swiss-Prot:A0A068Q6L2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_01g0008810 | OsLiXu_01g0008810.01 | Chr01 | 7079826 | 7087020 | + | NAM | ||
| CDS seq | atgcgggcgcgcgacgtggcgttcgcgagccggcccagggtcgccatggccgagcggctgctctacggcggccgcgacgtcgcgttcgcgccctacggcgagtactggcgccaggcgcgccgcatctgcgtcgtacacctcctcagcgcgcgccgcgtgctgtccttccgccgcgtcagggaggaggaggccgccgcgctcgtcgcccgcgtccgcgccgccgcgggcggcgccgtcgatttggtcgagcacctcaccgcctactccaacaccgtcgtctcccgcgccgtgttcggcgacgagagcgcgcgcggcttgtacggcgacgtcgacagggggcgcgcgctgaggaagctgttcgacgacttcgtggagctactcgggcaagagccgatgggggagctcctgccatggctcgggtgggtggacgctgtcagggggctggacgggaaggtgcagcgcacgtttgaggcgctggacagcatcatcgagaaggtgatcgacgatcaccgtcgccgccggcgccgccgtgaagtcggcaggcagatggacagcgacgacgacggtggcggcggcggcgatcaccgggatttcgtggacgtcttactcgacgtgaacgagacagacaaggacgcaggcattcgtctcggcacgatcgaaatcaaggccattatcctggacatgttcgcggcgggcacggacaccacgacgacggcgatggaatgggccatggcagagctgatcacccaccggaacgcaatgcacaaggtgcaggacgagatcagggcggtcgtcggcgtcacaggatgcgtcacggaggaccacattgacaggctgccttacctcaaggccgtgctcaaggagacgctccggctacacccaccaaacccactgctcgtgccgcacgtaccattagcagacaccgagatcctaggctacacggtcccgacgcacacccgggtattgatcaacgcgtggaccatcggccgcgacccggcgacatggggagagcacgctgagaagttcataccagagaggttccttaacaacaacgtggactacaaggggcaggactttgggctagtcccgttcggtgccggtaggagggggtgccctgggatggggttcgctgtgccgaccatagagatggcattggcaagcttattgtacaatttcagctgggagacgagaccggtggataggaggtgcaaatcgggcacgtcatcgctagacatgagcgaggtgaacgggatttccgtgcatctcaagtatgtcctcgccatcgtcgtaccgctcctgtacctcgtgctgcttccagccgggaacacgacgagaaatggcgctgcgaggtgggaggacgacggtggtgatggccggcgccgccggaggctgccgccgtcgccgcgggggctcccgctgctcggccacctccacctgctcggcgcgctgccgcaccgggcactgcggtccctcgccgcggcgcacggcccggtgctgctgctgcggctcggccgcgttcccgtggtggtcgtgtcgtcggcggccgcggccgaggaggtgatgcggtcgcgggacgtggagttcgcgagccggcccaggatggccatggccgagctgctgctctacggcggccgcgacgtcgcgttcgcgccctacggcgagtactggcgccaggcgccccgcatctgcgtggtccacctcctcagcgcgcgccgcgtcctcttgttccgccgcgtcagggaggaggaggccgccgcgctcgtcggccgcgtccgcgccgccgccgccgacgtcgtcgacctgtccgacctcctcatcgcttactccaacaccgtcttgacgcgcatcgcgttcggcgacgagagcgcgcgcggcggcggcggcggcgacagggggcgcgagctgaggaaggtgttcgacgacttcgcgaggttgctcgggacggagccgatgggggagctcttgccatggttctggtgggtggacgccttgagggggatagacgggaaggtgcagcgcacgtttgaggcgctggacggcatcctcgagagggtgatcgacgatcaccgtcgccgccgtgaaggcggccggcgtatggacgacgacggcggcggcgatcaccgggatttcgtggacgtgttgctcgacgtgaacgagacggacaaggacgctggcattcagctcggcaccctgatcaaccacccacgcgccatgcacaaaacgcagaacgagatccgggcagtcgtgggcaacactagtcatgtcaccaaggaccacgtggacaagctgccctacctcaaggctgttttcaaggagacgctccgactacacccaccactcccgctcctcatcccacgagagccaccggcggatgcccagatcctgggttacaccataccggcgcacacgcgggtggtgatcaacgcgtgggccatcggccgagacccggcagcatgggggcagcaaccggacaagttctcaccggagaaattcctcaacggcgccattgactacaagggacaggacttcgagctgctaccatttggcgccggtaggagggggtgccccgggatcgtgttcggggtgtcagccatggagatagcactcgcgagcttgctctaccattttgactgggaggcggcggcaactgatcacaggaggaggggcagccaagcatgggcgttgccagtggacatgagtgaggtcaatgggatagctgttcatctcaagtatgttctacatgtcgtcgctaaaccacgtatgccttaa
More
|
|||||||
| Protein seq | MRARDVAFASRPRVAMAERLLYGGRDVAFAPYGEYWRQARRICVVHLLSARRVLSFRRVREEEAAALVARVRAAAGGAVDLVEHLTAYSNTVVSRAVFGDESARGLYGDVDRGRALRKLFDDFVELLGQEPMGELLPWLGWVDAVRGLDGKVQRTFEALDSIIEKVIDDHRRRRRRREVGRQMDSDDDGGGGGDHRDFVDVLLDVNETDKDAGIRLGTIEIKAIILDMFAAGTDTTTTAMEWAMAELITHRNAMHKVQDEIRAVVGVTGCVTEDHIDRLPYLKAVLKETLRLHPPNPLLVPHVPLADTEILGYTVPTHTRVLINAWTIGRDPATWGEHAEKFIPERFLNNNVDYKGQDFGLVPFGAGRRGCPGMGFAVPTIEMALASLLYNFSWETRPVDRRCKSGTSSLDMSEVNGISVHLKYVLAIVVPLLYLVLLPAGNTTRNGAARWEDDGGDGRRRRRLPPSPRGLPLLGHLHLLGALPHRALRSLAAAHGPVLLLRLGRVPVVVVSSAAAAEEVMRSRDVEFASRPRMAMAELLLYGGRDVAFAPYGEYWRQAPRICVVHLLSARRVLLFRRVREEEAAALVGRVRAAAADVVDLSDLLIAYSNTVLTRIAFGDESARGGGGGDRGRELRKVFDDFARLLGTEPMGELLPWFWWVDALRGIDGKVQRTFEALDGILERVIDDHRRRREGGRRMDDDGGGDHRDFVDVLLDVNETDKDAGIQLGTLINHPRAMHKTQNEIRAVVGNTSHVTKDHVDKLPYLKAVFKETLRLHPPLPLLIPREPPADAQILGYTIPAHTRVVINAWAIGRDPAAWGQQPDKFSPEKFLNGAIDYKGQDFELLPFGAGRRGCPGIVFGVSAMEIALASLLYHFDWEAAATDHRRRGSQAWALPVDMSEVNGIAVHLKYVLHVVAKPRMP
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_01g0008810 | OsLiXu_01g0008810.02 | Chr01 | 7084871 | 7087163 | + | IsoSeq | ||
| CDS seq | atggcgctgcgaggtgggaggacgacggtggtgatggccggcgccgccggaggctgccgccgtcgccgcgggggctcccgctgctcggccacctccacctgctcggcgcgctgccgcaccgggcactgcggtccctcgccgcggcgcacggcccggtgctgctgctgcggctcggccgcgttcccgtggtggtcgtgtcgtcggcggccgcggccgagg
More
|
|||||||
| Protein seq | MALRGGRTTVVMAGAAGGCRRRRGGSRCSATSTCSARCRTGHCGPSPRRTARCCCCGSAAFPWWSCRRRPRPR |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.513962 | 0.0 | 1.031180 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0227800 | RBH | 2.465493 | 3.515313 | 2.946192 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g12770 | RBH | 1.666985 | 2.363968 | 0.758547 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0227800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0009150 | RBH | 0.381645 | 0.0 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0008800 | RBH | 0.374200 | 0.0 | 2.232614 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0009160 | SBH | 0.699528 | 0.0 | 1.015152 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0008690 | SBH | 0.121134 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0008760 | SBH | 13.217168 | 0.452093 | 2.263297 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0115200 | RBH | 4.551184 | 0.5310895 | 0.176884 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0008730 | RBH | 0.170703 | 0.0 | 0.349627 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0115000 | RBH | 4.3759025 | 2.2542725 | 0.011638 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0008600 | RBH | 0.239537 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0008790 | RBH | 0.316430 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0008740 | RBH | 2.980054 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0008800 | RBH | 0.072973 | 0.0 | 0.530393 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0008630 | RBH | 0.613575 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G008780 | SBH | 0.610610 | 0.0 | 0.584088 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0008660 | SBH | 0.464144 | 0.0 | 2.369665 |
