Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_01g0009160 | OGI:01021950 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr01:7511226-7536647 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atggagctctcgtcgtcgcttgctgccgtgttgcactcacctctcttcctcctcgccgcgctcctgctccttcccgtgttcaccttgctgagcttctcgtcggcgaagaagccagacgatggcggcggctggcggctgccgcttcctccgtcgccgcggggcgtcccgtttctggggcacctaccgcttcttggctccttgccgcaccggaagctccggtcgatggccgaggcgcacgggccggtgatgctgctctggttcggccgcgtgcccaccgtcgtggcgtcgtcggcggcctcggcgcaggaggccatgagggcccgcgacgcggcgttcgcgagccgcgccagggtgcgcatggcggagcggctcatctatgggcgtgacatggtgttcgcgccatacggcgagttctggcgccaggcgcgccgcgtcagcgtgctccacctcctcagcccgcgccgcatcgcctccttccgcggcgtcagggagcaggaggtcgccgcgctcctcgaccgcgtccggcgccgctgcggcgttcgcggtggcggcgagaccgtgaacctgagcgacctgctcatgtcctacgccaacggcgtcatctcgcgcgccgcgttcggcgacggcgcgtatggcctcgacggcgacgagggcggcgagaagctgagggagctgttcgccaacttcgaggcgcttctcgggacggcgacggtgggggagttcgtgccgtggctggcgtgggtggacaagctgatgggcctcgacgccaaggcggcgcgcatatcggcggagctcgacggcttgctggagcgtgtcatcgcggaccaccgcgagcgccgccgcctcagccagccggacggcggcgacggcgacggcgacggcgatgagaacgttgatcaccgggacttcgtggacgtgctgctggacgtgagcgaggtggaggagggcgccggcgccggagaagtgctgctgttcgacactgtcgccatcaaggccatcattatcctggtgagtcctttcgttgtgacacgacacgttgattattgcgatcgaaaccgtctcatataattttgcaaaatcatggagtatcttctaaatattccacttcatcaaagtccaaataatacggagtataatcctagtttccatgacaataaatccacaccacaccagtatctatcttggctctggttcaaagtatcatgttcaaagtcatagtgatacgtgatgcatattaattgccaatattaaaccgtgttttcaatttttcatatcacttttcaatacaactactgcagtattactccatccgtttcaggtataagacgttttaactttagaaaaaatcaaactacatcaaatttgactaagtttaatgacaaatataataatatttataatatcaaattagtttctttaaatcaataattaaatatattttcataataaatttgttttgggttaaaaatattattatttttttctataaacttagttaaatttaaaacagtttgattttgaccaaagtcaaaaagtcttgtaacctgaaacagtttaagatacatttcaattattaatgaatgacgcatatgaacaatgaaaaagcaggacatgatagcggccgccacagacaccaccttcacgaccttggaatgggctatggcggagctcatcaaccaccctcccgtcatgcgcaagctgcagtgcgagatccgcgcggccgtcggcgtccccggcgcctccggcggcgccgaagtcaccgaggaccacctcggcgagctccggctcctcagggccgtggtcaaggagacgctccggctgcacgcgccggtgccgctgctcgtgccccgcgagacggtggaggacacggagctgctgggctaccgcgtcccggcgcggacgcgggtgatcatcaacgtgtgggctatcggccgcgacgcggcggcgtggggcgaccgcgcggaggagttcgtgccggagcggtggctcgacggcggcggcgaggaggtggagtacgcggcgcagctggggcaggacttcaggttcgtgccgttcggcgccgggaggagggggtgccccggcgccgggttcgccgcgccgagcatcgagctggcgctcaccaacctgctgtaccacttcgactgggagctaccgccacatgccgacggagcggcggcggcgacggcggcgaggctggacatgggtgagctgtttgggctgtccatgcgaatgaagacgacgctgaatctagtcgcaaagccatggtcttccgatgtttgatgtgttcagtatgaaagctgctaggcaggctagctaccatctgtgcctattgcaacatataatttgtgtagcgagggtcatctatatttaaggggtaagtgcatgtgcacctacacgtgcttcaccgttagatttgctttgacattagtgtatactttttatattttagttaagcacaatatatattatgttctcggtataacatgaattcataatatcagtaaagcatttaatggcttagtacgtagatagagtgcacatgaacttagagcaatgataatagtggggcagtcccaacctagaaattatctaatggttttaatccatatttatctgtcatatagacactaagcatgcataaaaactgtatacccgatagatagtttcttcataataaattatcatccaattaatcacctcttttctctctgcattcgtccatgtattctcttatttcattctttattcctgtataaaactaatttttttcatgaaaaatggtttcttaatattttttcctctctcatcagtaaatcctcttgccacctagctttttgattatgtgatagtatattaatgttatgtaaactagttgaggtggagggttgggactaccccaaggctaatataatcttatatggagaagagagataaagaaaaatatagaggttggctctccgccggatgacaatgacctcatccaagagatcctcttatgcctcccctcgcactcgtcctctatctctcgtgccttcctcgtctacaagcggtggcgccgccttgtctccgactacggtttcctcctctgcttccgcgcccaccaccccggatcatccccttctcgtcatcttcaaggacaagctccgctacctcgtttcctgatccgtccttgacccgccagttctcgtcccgctcgaccacacttcacccctgcggctcaacggcgaccggcgcgaccgcgtcacgagcctcctcagctattgtcgacagggatactcgcggaccgtattctgaggatattggggtatgttgatacgaggatctacacgatacgacatcaagcacataagagacagagattatattggttcaggtctctcgcaaggtaatagccctaatctagtttatatgggattatgaagaaaactacaaactacaatagagaacaacaaaaatcccgagactaccaatgagatccctgtcgagaactacttgatgagacctatctgcaagttggctttcaagtagtcctctggattgctcctgctgtggtgggtgtcttgcactaagattcgatgatatgtatttataccgcagatcaccttagtctccaagtagaactcagagacaacagaccccgtatgatacgacaacatccttatttccactttcgtgatcaaacatgaagcaccagggaacggatatggccggaagggcctctaccatgcatataccgactcggacactgactttcagtgtttgtggatgttgaaggccgacccatggcacggggttttggcccgacccaagcacggcacgacccgatctttgggccgtgcttgggcctttgcctcggcatgatgggccgacccggcacgacctggtccaatgattagggagttaaatagaggagggaccaaaatagacttatttccagccatataatgcatggtccaaagatggtgatttctttttttttttttgagaacatgatggtgattccgtatggactttgtagaggttctagacggcttgtttgacaacgcgagggaaggggattgggagtttatacaagggaattgatggtgagattaagatagaaatttgatttttaatcccagtatcttttttggtagaggtggtggaaattgatagggagtttagttggaaattaggtcattaatgaaaacggatggctgagatttatttaggtaaagtaaaggaggaattccctcccaattaccaccccctacccaggtattgaaaaggagggagttcctccctcaattcctcacccccatcccaccaaaattcccatgtatcccaaccaaacaaagcagttaatagccttatccttttaaactcccaatccctcctgaaaactccctccaaccaaacgggccgtctgtgtatatagaattgtagacttcaatttactgttgtgacttttccaatttctctggaaggattgtgcttagtttctactttttttattttatttattttagagaaagggtattttttttacacggcctctacatctaaccagatatatgcaacctttataaattagaaacttagccctcaaataacctaatataaagttcgctcatatgaaaatttaaactcaaaaccttaggatactactcagatcactgcaaccactagacttgtccttttacgcttattttctacaataacaactatacgcgagagctacatttttgtcttcgttttaatcacgtcaaccagcattttggcttttccatcaacacaaattattcggcgatgttaaatcactgtcattggacacaagcggatcgagccgagtacactcgttcagacatggagctctcgtcgcttgctgctctgttgcactcacccctcctccttgccgtgctcctgctcgtcttctcatggctgatcgtctcgtcgaccaagaagaggcctcctccgccctgcggcgatggcggccggcggctgccgctgccaccgtcgcc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tcatcccacgagagccaccggcggacacccagatcctgggttacaccataccagcgcacacgcgggtggtgatcaacgcgtgggccatcggccgagacgcggcagcatgggggcagcaaccggacgagttctcaccggagaaattcctcaacagcaccattgactacaagggacaggacttcgagctgctaccatttggcgccggtaggagggggtgccccgggatcgtgttcggggtgtcagccatggagatagcactcgcgagcttgctctaccattttgactgggaggcggcggcaactgatcacaggaggaggggcagccaagcatgggcgttgccagtagacatgagtgaggtcaatgggatagctgttcatctcaagtatggtctacatgtcgtcgctaaaccacgtatgccttaa
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| CDS seq | atggagctctcgtcgtcgcttgctgccgtgttgcactcacctctcttcctcctcgccgcgctcctgctccttcccgtgttcaccttgctgagcttctcgtcggcgaagaagccagacgatggcggcggctggcggctgccgcttcctccgtcgccgcggggcgtcccgtttctggggcacctaccgcttcttggctccttgccgcaccggaagctccggtcgatggccgaggcgcacgggccggtgatgctgctctggttcggccgcgtgcccaccgtcgtggcgtcgtcggcggcctcggcgcaggaggccatgagggcccgcgacgcggcgttcgcgagccgcgccagggtgcgcatggcggagcggctcatctatgggcgtgacatggtgttcgcgccatacggcgagttctggcgccaggcgcgccgcgtcagcgtgctccacctcctcagcccgcgccgcatcgcctccttccgcggcgtcagggagcaggaggtcgccgcgctcctcgaccgcgtccggcgccgctgcggcgttcgcggtggcggcgagaccgtgaacctgagcgacctgctcatgtcctacgccaacggcgtcatctcgcgcgccgcgttcggcgacggcgcgtatggcctcgacggcgacgagggcggcgagaagctgagggagctgttcgccaacttcgaggcgcttctcgggacggcgacggtgggggagttcgtgccgtggctggcgtgggtggacaagctgatgggcctcgacgccaaggcggcgcgcatatcggcggagctcgacggcttgctggagcgtgtcatcgcggaccaccgcgagcgccgccgcctcagccagccggacggcggcgacggcgacggcgacggcgatgagaacgttgatcaccgggacttcgtggacgtgctgctggacgtgagcgaggtggaggagggcgccggcgccggagaagtgctgctgttcgacactgtcgccatcaaggccatcattatcctggacatgatagcggccgccacagacaccaccttcacgaccttggaatgggctatggcggagctcatcaaccaccctcccgtcatgcgcaagctgcagtgcgagatccgcgcggccgtcggcgtccccggcgcctccggcggcgccgaagtcaccgaggaccacctcggcgagctccggctcctcagggccgtggtcaaggagacgctccggctgcacgcgccggtgccgctgctcgtgccccgcgagacggtggaggacacggagctgctgggctaccgcgtcccggcgcggacgcgggtgatcatcaacgtgtgggctatcggccgcgacgcggcggcgtggggcgaccgcgcggaggagttcgtgccggagcggtggctcgacggcggcggcgaggaggtggagtacgcggcgcagctggggcaggacttcaggttcgtgccgttcggcgccgggaggagggggtgccccggcgccgggttcgccgcgccgagcatcgagctggcgctcaccaacctgctgtaccacttcgactgggagctaccgccacatgccgacggagcggcggcggcgacggcggcgaggctggacatgggtgagctgtttgggctgtccatgcgaatgaagacgacgctgaatctagtcgcaaagccatggtcttccgatctctcgtcgcttgctgctctgttgcactcacccctcctccttgccgtgctcctgctcgtcttctcatggctgatcgtctcgtcgaccaagaagaggcctcctccgccctgcggcgatggcggccggcggctgccgctgccaccgtcgccgccgggtgtcccgctactcgggcacctcccgcttcttggcaccttgccgcaccggaagctccggtcgatggccgaggcgcacggcccggtgatgctgctgcggctcggccgcgtgcccgccgtcgtggcgtcgtcggcggccgcggctgaggaggtgatgaggacccgggacctggcgttcgcgagccggcccagggtgcgcatgtcggagcggctcttctacggccgcgacatggcgttcgcgccctacggcgagttctggcgccaggcgcgccgcgtcaccgtgctccacctcctcagcccgcgccgcgtcctctccttccgcggcgtccgggagcaggaggtcgccgcgctgctggaccgcgtccggcgccgctgcggcggcggcggcgagaccgtgaacctgagcgacctgctcatgtcctacgcccacggcgtcatctcccgggcggcgttcggccacggcggcgcgcacgggttcgacggcgacgaggggggagagaagctgaggaagctgttcgccgacttcgaggggcttctcgggacgatgacggtgggggagttcgtgccatggctggcgtgggtggacaagctgacgggcctggacgccaaggtggcgcgcacgtcggcggcgatggacggcttgctggagcgtgtcatcgcggaccaccgcgagcggcggcgcagccgcggccaggctgtcggcgacggcgaggcggacgctgatcaccgggacttcgtggacgtgatgctggacgtgagcgaggcggaggagggcgccggcgccggcgccggaggagtgctgttcgacactgtcgccatcaaggccgttatcctggtacactccagcttcaccaccacggaatgggtcatggcggagctcatcaaccatccacgcgtgatgcgcaagctgcaggatgagattcgcgcggtcgtgggcacatcgagtgcatccgccgccgccgccgccaccggcggcggccaagtcaccgaggaccacctcggcgagctgcccttcctcagggccgtgatcaaggagatgctccggctgcacgcgccggggccgcttctcctcccccgcgagacggtggaggacacggagctgctgggctaccgcatcccggcgcgcacgcgggtgatcatcaacgtgtgggccatcggccgcgacgcggcggcgtggggtgattccgcggaggagttcgtgccggagcggtggctcgatggcggcggcggtggcggcgtggagtacgcgcagcagctggggaaggactccaggtttgtgccgttcggcgccgggaggagaggctgccccggcgccgggttcgccgcgctgagcgtcgagctggcgctcgccaacctgctgtaccacttcgactgggagttgccaccgccggcggccagcgggatcatggcgacgacgagattggacatggacgagctgttcggattgtccgtgcgtctcaaggcggatctgaatctagttgccaagccgtggcttccgccgtcgccgccgtgggggctcccgctgctcggacacctccacctgctcggcgccctgccgcaccgggctctccggtccctcgccgcggcccacggcccggtgctgctgctccgtctcgggcgcgtccccgtggtggtcgtgtcgtcggcggccgccgccgaggaggtgatgcggacgcgcgacctggagttcgcgagccggcccagggtcgccatggccgagcggctgctctacggcggccgcgacgtcgcgttcgcgccctacggcgagtactggcgccagacgcgccgcatctgcgtggtccacctcctcagcgcgcgccgcgtgctgtccttccgccgcgtcagggaggaggaggccgccgcgctcgtcgcccgcgtccgcgccgcgggcggcgccgtcgatttggtcgagcacctcaccgcctactccaacaccgtcgtctcccgcgccgtgttcggcgacgagagcgcgcgtggcttgtacggcgacgtcgacagggggcgcgtgctgaggaagctgttcgacgacttcgtggagctactcgggcaagagccgatgggggagctcctgccatggctcgggtgggtggacgctttgaacggaatggaggtgaaggtgcagcgcacatttgaggcgctggacggcatcctcgagaaggtgatcgacgaccaccgtcgccgccgccgtgaggtcggtaggcagatggacgacggcggcggcggcgatcaccgggatttcgtggacgtgttgctcgacgtcaacgagacggacatggacgctgaatgggccatggcggagttgatcacccatccggatgcaatgcgcaacgcgcaggacgagatcaaggcggtcgtcggcatcaccagccacatcaccgaggaccacttggacaggctaccttacctcaaggctgtacttaaggaaacgctccggctgcacccgccgctcccactacttgtgccacatgaaccgtcgtcagataccaagatcctgggctatagcatcccggcatgcactcgaatagtgatcaacgcgtggactatcggccgtgaccaggcgacatggggagagcatgcggaggagttcatacctgagagattcctggagagtggcttggactacatagggcaagactttgtgctagtgccatttggtgccggtaggagggggtgtcctggggtcgggttcgctgtgcaagccatggagatggcattggcgagcttgctgtacaattttgactgggagacgagagtggtggataggaggagcgagtttgggacttcatcactagacatgagtgagatgaatgggctttcatacacgacgagaaatggcgctgcgaggtgggaggacgacggcggtgatggccggcgccgccggaggctgccgccgtcgccgcgggggctcccgctgctcggccacctccacctgctcggcgcgctgccgcaccgggcactgcggtccctcgccgcggcgcacggcccggtgctgctgctgcggctcggccgcgttcccgtggtggtcgtgtcgtcggcggccgcggccgaggaggtgatgcggtcgcgggacatggagttcgcgagccggcccaggatggccatggccgagctgctgctctacggcggccgcgacgtcgcgttcgcgccctacggcgagtactggcgccaggcgcgccgcatctgcgtggtccacctcctcagcgcgcgccgcgtcctctcgttccgccgcgtcagggaggaggaggccgccgcgctcgtcggccgcgtccgtgccgccgccgccgacgtcgtcgtcgacctgtccgacctcctcatctcttactccaacaccgtcttgacgcgcatcgcgttcggcgacgagagcgcgcgcggcggcggcggcggcggcgacagggggcgcgagctgaggaaggtgttcgacgacttcgcgaggttgctcgggacggagccgatgggggagctcttgccatggttctggtgggtggacgccttgagggggatagacgggaaggtgcagcgcacgtttgaggcgctggacggcatcctcgagagggtgatcgacgatcaccgtcgccgccgtgaaggcggccggcgtatggacgacgacggcggcggcgatcaccgggatttcgtggacgtgttgctcgacgtgaacgagacggacaaggacgctggcattcagctcggcaccctgatcaaccacccacgcgccatgcgcaaagcgcagaacgagatccgggcagtcgtgggcaacactagtcatgtcaccaaggaccacgtggacaagctgccctacctcaaggctgttttcaaggagacgctccggctacacccaccactcccgctcctcatcccacgagagccaccggcggacacccagatcctgggttacaccataccagcgcacacgcgggtggtgatcaacgcgtgggccatcggccgagacgcggcagcatgggggcagcaaccggacgagttctcaccggagaaattcctcaacagcaccattgactacaagggacaggacttcgagctgctaccatttggcgccggtaggagggggtgccccgggatcgtgttcggggtgtcagccatggagatagcactcgcgagcttgctctaccattttgactgggaggcggcggcaactgatcacaggaggaggggcagccaagcatgggcgttgccagtagacatgagtgaggtcaatgggatagctgttcatctcaagtatggtctacatgtcgtcgctaaaccacgtatgccttaa
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| Protein seq | MELSSSLAAVLHSPLFLLAALLLLPVFTLLSFSSAKKPDDGGGWRLPLPPSPRGVPFLGHLPLLGSLPHRKLRSMAEAHGPVMLLWFGRVPTVVASSAASAQEAMRARDAAFASRARVRMAERLIYGRDMVFAPYGEFWRQARRVSVLHLLSPRRIASFRGVREQEVAALLDRVRRRCGVRGGGETVNLSDLLMSYANGVISRAAFGDGAYGLDGDEGGEKLRELFANFEALLGTATVGEFVPWLAWVDKLMGLDAKAARISAELDGLLERVIADHRERRRLSQPDGGDGDGDGDENVDHRDFVDVLLDVSEVEEGAGAGEVLLFDTVAIKAIIILDMIAAATDTTFTTLEWAMAELINHPPVMRKLQCEIRAAVGVPGASGGAEVTEDHLGELRLLRAVVKETLRLHAPVPLLVPRETVEDTELLGYRVPARTRVIINVWAIGRDAAAWGDRAEEFVPERWLDGGGEEVEYAAQLGQDFRFVPFGAGRRGCPGAGFAAPSIELALTNLLYHFDWELPPHADGAAAATAARLDMGELFGLSMRMKTTLNLVAKPWSSDLSSLAALLHSPLLLAVLLLVFSWLIVSSTKKRPPPPCGDGGRRLPLPPSPPGVPLLGHLPLLGTLPHRKLRSMAEAHGPVMLLRLGRVPAVVASSAAAAEEVMRTRDLAFASRPRVRMSERLFYGRDMAFAPYGEFWRQARRVTVLHLLSPRRVLSFRGVREQEVAALLDRVRRRCGGGGETVNLSDLLMSYAHGVISRAAFGHGGAHGFDGDEGGEKLRKLFADFEGLLGTMTVGEFVPWLAWVDKLTGLDAKVARTSAAMDGLLERVIADHRERRRSRGQAVGDGEADADHRDFVDVMLDVSEAEEGAGAGAGGVLFDTVAIKAVILVHSSFTTTEWVMAELINHPRVMRKLQDEIRAVVGTSSASAAAAATGGGQVTEDHLGELPFLRAVIKEMLRLHAPGPLLLPRETVEDTELLGYRIPARTRVIINVWAIGRDAAAWGDSAEEFVPERWLDGGGGGGVEYAQQLGKDSRFVPFGAGRRGCPGAGFAALSVELALANLLYHFDWELPPPAASGIMATTRLDMDELFGLSVRLKADLNLVAKPWLPPSPPWGLPLLGHLHLLGALPHRALRSLAAAHGPVLLLRLGRVPVVVVSSAAAAEEVMRTRDLEFASRPRVAMAERLLYGGRDVAFAPYGEYWRQTRRICVVHLLSARRVLSFRRVREEEAAALVARVRAAGGAVDLVEHLTAYSNTVVSRAVFGDESARGLYGDVDRGRVLRKLFDDFVELLGQEPMGELLPWLGWVDALNGMEVKVQRTFEALDGILEKVIDDHRRRRREVGRQMDDGGGGDHRDFVDVLLDVNETDMDAEWAMAELITHPDAMRNAQDEIKAVVGITSHITEDHLDRLPYLKAVLKETLRLHPPLPLLVPHEPSSDTKILGYSIPACTRIVINAWTIGRDQATWGEHAEEFIPERFLESGLDYIGQDFVLVPFGAGRRGCPGVGFAVQAMEMALASLLYNFDWETRVVDRRSEFGTSSLDMSEMNGLSYTTRNGAARWEDDGGDGRRRRRLPPSPRGLPLLGHLHLLGALPHRALRSLAAAHGPVLLLRLGRVPVVVVSSAAAAEEVMRSRDMEFASRPRMAMAELLLYGGRDVAFAPYGEYWRQARRICVVHLLSARRVLSFRRVREEEAAALVGRVRAAAADVVVDLSDLLISYSNTVLTRIAFGDESARGGGGGGDRGRELRKVFDDFARLLGTEPMGELLPWFWWVDALRGIDGKVQRTFEALDGILERVIDDHRRRREGGRRMDDDGGGDHRDFVDVLLDVNETDKDAGIQLGTLINHPRAMRKAQNEIRAVVGNTSHVTKDHVDKLPYLKAVFKETLRLHPPLPLLIPREPPADTQILGYTIPAHTRVVINAWAIGRDAAAWGQQPDEFSPEKFLNSTIDYKGQDFELLPFGAGRRGCPGIVFGVSAMEIALASLLYHFDWEAAATDHRRRGSQAWALPVDMSEVNGIAVHLKYGLHVVAKPRMP |
||||||||||
| Function | Cytochrome P450 71A1 [UniProtKB/Swiss-Prot:P24465] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_01g0009160 | OsCMeo_01g0009160.01 | Chr01 | 7511226 | 7536647 | + | NAM | ||
| CDS seq | atggagctctcgtcgtcgcttgctgccgtgttgcactcacctctcttcctcctcgccgcgctcctgctccttcccgtgttcaccttgctgagcttctcgtcggcgaagaagccagacgatggcggcggctggcggctgccgcttcctccgtcgccgcggggcgtcccgtttctggggcacctaccgcttcttggctccttgccgcaccggaagctccggtcgatggccgaggcgcacgggccggtgatgctgctctggttcggccgcgtgcccaccgtcgtggcgtcgtcggcggcctcggcgcaggaggccatgagggcccgcgacgcggcgttcgcgagccgcgccagggtgcgcatggcggagcggctcatctatgggcgtgacatggtgttcgcgccatacggcgagttctggcgccaggcgcgccgcgtcagcgtgctccacctcctcagcccgcgccgcatcgcctccttccgcggcgtcagggagcaggaggtcgccgcgctcctcgaccgcgtccggcgccgctgcggcgttcgcggtggcggcgagaccgtgaacctgagcgacctgctcatgtcctacgccaacggcgtcatctcgcgcgccgcgttcggcgacggcgcgtatggcctcgacggcgacgagggcggcgagaagctgagggagctgttcgccaacttcgaggcgcttctcgggacggcgacggtgggggagttcgtgccgtggctggcgtgggtggacaagctgatgggcctcgacgccaaggcggcgcgcatatcggcggagctcgacggcttgctggagcgtgtcatcgcggaccaccgcgagcgccgccgcctcagccagccggacggcggcgacggcgacggcgacggcgatgagaacgttgatcaccgggacttcgtggacgtgctgctggacgtgagcgaggtggaggagggcgccggcgccggagaagtgctgctgttcgacactgtcgccatcaaggccatcattatcctggacatgatagcggccgccacagacaccaccttcacgaccttggaatgggctatggcggagctcatcaaccaccctcccgtcatgcgcaagctgcagtgcgagatccgcgcggccgtcggcgtccccggcgcctccggcggcgccgaagtcaccgaggaccacctcggcgagctccggctcctcagggccgtggtcaaggagacgctccggctgcacgcgccggtgccgctgctcgtgccccgcgagacggtggaggacacggagctgctgggctaccgcgtcccggcgcggacgcgggtgatcatcaacgtgtgggctatcggccgcgacgcggcggcgtggggcgaccgcgcggaggagttcgtgccggagcggtggctcgacggcggcggcgaggaggtggagtacgcggcgcagctggggcaggacttcaggttcgtgccgttcggcgccgggaggagggggtgccccggcgccgggttcgccgcgccgagcatcgagctggcgctcaccaacctgctgtaccacttcgactgggagctaccgccacatgccgacggagcggcggcggcgacggcggcgaggctggacatgggtgagctgtttgggctgtccatgcgaatgaagacgacgctgaatctagtcgcaaagccatggtcttccgatctctcgtcgcttgctgctctgttgcactcacccctcctccttgccgtgctcctgctcgtcttctcatggctgatcgtctcgtcgaccaagaagaggcctcctccgccctgcggcgatggcggccggcggctgccgctgccaccgtcgccgccgggtgtcccgctactcgggcacctcccgcttcttggcaccttgccgcaccggaagctccggtcgatggccgaggcgcacggcccggtgatgctgctgcggctcggccgcgtgcccgccgtcgtggcgtcgtcggcggccgcggctgaggaggtgatgaggacccgggacctggcgttcgcgagccggcccagggtgcgcatgtcggagcggctcttctacggccgcgacatggcgttcgcgccctacggcgagttctggcgccaggcgcgccgcgtcaccgtgctccacctcctcagcccgcgccgcgtcctctccttccgcggcgtccgggagcaggaggtcgccgcgctgctggaccgcgtccggcgccgctgcggcggcggcggcgagaccgtgaacctgagcgacctgctcatgtcctacgcccacggcgtcatctcccgggcggcgttcggccacggcggcgcgcacgggttcgacggcgacgaggggggagagaagctgaggaagctgttcgccgacttcgaggggcttctcgggacgatgacggtgggggagttcgtgccatggctggcgtgggtggacaagctgacgggcctggacgccaaggtggcgcgcacgtcggcggcgatggacggcttgctggagcgtgtcatcgcggaccaccgcgagcggcggcgcagccgcggccaggctgtcggcgacggcgaggcggacgctgatcaccgggacttcgtggacgtgatgctggacgtgagcgaggcggaggagggcgccggcgccggcgccggaggagtgctgttcgacactgtcgccatcaaggccgttatcctggtacactccagcttcaccaccacggaatgggtcatggcggagctcatcaaccatccacgcgtgatgcgcaagctgcaggatgagattcgcgcggtcgtgggcacatcgagtgcatccgccgccgccgccgccaccggcggcggccaagtcaccgaggaccacctcggcgagctgcccttcctcagggccgtgatcaaggagatgctccggctgcacgcgccggggccgcttctcctcccccgcgagacggtggaggacacggagctgctgggctaccgcatcccggcgcgcacgcgggtgatcatcaacgtgtgggccatcggccgcgacgcggcggcgtggggtgattccgcggaggagttcgtgccggagcggtggctcgatggcggcggcggtggcggcgtggagtacgcgcagcagctggggaaggactccaggtttgtgccgttcggcgccgggaggagaggctgccccggcgccgggttcgccgcgctgagcgtcgagctggcgctcgccaacctgctgtaccacttcgactgggagttgccaccgccggcggccagcgggatcatggcgacgacgagattggacatggacgagctgttcggattgtccgtgcgtctcaaggcggatctgaatctagttgccaagccgtggcttccgccgtcgccgccgtgggggctcccgctgctcggacacctccacctgctcggcgccctgccgcaccgggctctccggtccctcgccgcggcccacggcccggtgctgctgctccgtctcgggcgcgtccccgtggtggtcgtgtcgtcggcggccgccgccgaggaggtgatgcggacgcgcgacctggagttcgcgagccggcccagggtcgccatggccgagcggctgctctacggcggccgcgacgtcgcgttcgcgccctacggcgagtactggcgccagacgcgccgcatctgcgtggtccacctcctcagcgcgcgccgcgtgctgtccttccgccgcgtcagggaggaggaggccgccgcgctcgtcgcccgcgtccgcgccgcgggcggcgccgtcgatttggtcgagcacctcaccgcctactccaacaccgtcgtctcccgcgccgtgttcggcgacgagagcgcgcgtggcttgtacggcgacgtcgacagggggcgcgtgctgaggaagctgttcgacgacttcgtggagctactcgggcaagagccgatgggggagctcctgccatggctcgggtgggtggacgctttgaacggaatggaggtgaaggtgcagcgcacatttgaggcgctggacggcatcctcgagaaggtgatcgacgaccaccgtcgccgccgccgtgaggtcggtaggcagatggacgacggcggcggcggcgatcaccgggatttcgtggacgtgttgctcgacgtcaacgagacggacatggacgctgaatgggccatggcggagttgatcacccatccggatgcaatgcgcaacgcgcaggacgagatcaaggcggtcgtcggcatcaccagccacatcaccgaggaccacttggacaggctaccttacctcaaggctgtacttaaggaaacgctccggctgcacccgccgctcccactacttgtgccacatgaaccgtcgtcagataccaagatcctgggctatagcatcccggcatgcactcgaatagtgatcaacgcgtggactatcggccgtgaccaggcgacatggggagagcatgcggaggagttcatacctgagagattcctggagagtggcttggactacatagggcaagactttgtgctagtgccatttggtgccggtaggagggggtgtcctggggtcgggttcgctgtgcaagccatggagatggcattggcgagcttgctgtacaattttgactgggagacgagagtggtggataggaggagcgagtttgggacttcatcactagacatgagtgagatgaatgggctttcatacacgacgagaaatggcgctgcgaggtgggaggacgacggcggtgatggccggcgccgccggaggctgccgccgtcgccgcgggggctcccgctgctcggccacctccacctgctcggcgcgctgccgcaccgggcactgcggtccctcgccgcggcgcacggcccggtgctgctgctgcggctcggccgcgttcccgtggtggtcgtgtcgtcggcggccgcggccgaggaggtgatgcggtcgcgggacatggagttcgcgagccggcccaggatggccatggccgagctgctgctctacggcggccgcgacgtcgcgttcgcgccctacggcgagtactggcgccaggcgcgccgcatctgcgtggtccacctcctcagcgcgcgccgcgtcctctcgttccgccgcgtcagggaggaggaggccgccgcgctcgtcggccgcgtccgtgccgccgccgccgacgtcgtcgtcgacctgtccgacctcctcatctcttactccaacaccgtcttgacgcgcatcgcgttcggcgacgagagcgcgcgcggcggcggcggcggcggcgacagggggcgcgagctgaggaaggtgttcgacgacttcgcgaggttgctcgggacggagccgatgggggagctcttgccatggttctggtgggtggacgccttgagggggatagacgggaaggtgcagcgcacgtttgaggcgctggacggcatcctcgagagggtgatcgacgatcaccgtcgccgccgtgaaggcggccggcgtatggacgacgacggcggcggcgatcaccgggatttcgtggacgtgttgctcgacgtgaacgagacggacaaggacgctggcattcagctcggcaccctgatcaaccacccacgcgccatgcgcaaagcgcagaacgagatccgggcagtcgtgggcaacactagtcatgtcaccaaggaccacgtggacaagctgccctacctcaaggctgttttcaaggagacgctccggctacacccaccactcccgctcctcatcccacgagagccaccggcggacacccagatcctgggttacaccataccagcgcacacgcgggtggtgatcaacgcgtgggccatcggccgagacgcggcagcatgggggcagcaaccggacgagttctcaccggagaaattcctcaacagcaccattgactacaagggacaggacttcgagctgctaccatttggcgccggtaggagggggtgccccgggatcgtgttcggggtgtcagccatggagatagcactcgcgagcttgctctaccattttgactgggaggcggcggcaactgatcacaggaggaggggcagccaagcatgggcgttgccagtagacatgagtgaggtcaatgggatagctgttcatctcaagtatggtctacatgtcgtcgctaaaccacgtatgccttaa
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| Protein seq | MELSSSLAAVLHSPLFLLAALLLLPVFTLLSFSSAKKPDDGGGWRLPLPPSPRGVPFLGHLPLLGSLPHRKLRSMAEAHGPVMLLWFGRVPTVVASSAASAQEAMRARDAAFASRARVRMAERLIYGRDMVFAPYGEFWRQARRVSVLHLLSPRRIASFRGVREQEVAALLDRVRRRCGVRGGGETVNLSDLLMSYANGVISRAAFGDGAYGLDGDEGGEKLRELFANFEALLGTATVGEFVPWLAWVDKLMGLDAKAARISAELDGLLERVIADHRERRRLSQPDGGDGDGDGDENVDHRDFVDVLLDVSEVEEGAGAGEVLLFDTVAIKAIIILDMIAAATDTTFTTLEWAMAELINHPPVMRKLQCEIRAAVGVPGASGGAEVTEDHLGELRLLRAVVKETLRLHAPVPLLVPRETVEDTELLGYRVPARTRVIINVWAIGRDAAAWGDRAEEFVPERWLDGGGEEVEYAAQLGQDFRFVPFGAGRRGCPGAGFAAPSIELALTNLLYHFDWELPPHADGAAAATAARLDMGELFGLSMRMKTTLNLVAKPWSSDLSSLAALLHSPLLLAVLLLVFSWLIVSSTKKRPPPPCGDGGRRLPLPPSPPGVPLLGHLPLLGTLPHRKLRSMAEAHGPVMLLRLGRVPAVVASSAAAAEEVMRTRDLAFASRPRVRMSERLFYGRDMAFAPYGEFWRQARRVTVLHLLSPRRVLSFRGVREQEVAALLDRVRRRCGGGGETVNLSDLLMSYAHGVISRAAFGHGGAHGFDGDEGGEKLRKLFADFEGLLGTMTVGEFVPWLAWVDKLTGLDAKVARTSAAMDGLLERVIADHRERRRSRGQAVGDGEADADHRDFVDVMLDVSEAEEGAGAGAGGVLFDTVAIKAVILVHSSFTTTEWVMAELINHPRVMRKLQDEIRAVVGTSSASAAAAATGGGQVTEDHLGELPFLRAVIKEMLRLHAPGPLLLPRETVEDTELLGYRIPARTRVIINVWAIGRDAAAWGDSAEEFVPERWLDGGGGGGVEYAQQLGKDSRFVPFGAGRRGCPGAGFAALSVELALANLLYHFDWELPPPAASGIMATTRLDMDELFGLSVRLKADLNLVAKPWLPPSPPWGLPLLGHLHLLGALPHRALRSLAAAHGPVLLLRLGRVPVVVVSSAAAAEEVMRTRDLEFASRPRVAMAERLLYGGRDVAFAPYGEYWRQTRRICVVHLLSARRVLSFRRVREEEAAALVARVRAAGGAVDLVEHLTAYSNTVVSRAVFGDESARGLYGDVDRGRVLRKLFDDFVELLGQEPMGELLPWLGWVDALNGMEVKVQRTFEALDGILEKVIDDHRRRRREVGRQMDDGGGGDHRDFVDVLLDVNETDMDAEWAMAELITHPDAMRNAQDEIKAVVGITSHITEDHLDRLPYLKAVLKETLRLHPPLPLLVPHEPSSDTKILGYSIPACTRIVINAWTIGRDQATWGEHAEEFIPERFLESGLDYIGQDFVLVPFGAGRRGCPGVGFAVQAMEMALASLLYNFDWETRVVDRRSEFGTSSLDMSEMNGLSYTTRNGAARWEDDGGDGRRRRRLPPSPRGLPLLGHLHLLGALPHRALRSLAAAHGPVLLLRLGRVPVVVVSSAAAAEEVMRSRDMEFASRPRMAMAELLLYGGRDVAFAPYGEYWRQARRICVVHLLSARRVLSFRRVREEEAAALVGRVRAAAADVVVDLSDLLISYSNTVLTRIAFGDESARGGGGGGDRGRELRKVFDDFARLLGTEPMGELLPWFWWVDALRGIDGKVQRTFEALDGILERVIDDHRRRREGGRRMDDDGGGDHRDFVDVLLDVNETDKDAGIQLGTLINHPRAMRKAQNEIRAVVGNTSHVTKDHVDKLPYLKAVFKETLRLHPPLPLLIPREPPADTQILGYTIPAHTRVVINAWAIGRDAAAWGQQPDEFSPEKFLNSTIDYKGQDFELLPFGAGRRGCPGIVFGVSAMEIALASLLYHFDWEAAATDHRRRGSQAWALPVDMSEVNGIAVHLKYGLHVVAKPRMP
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_01g0009160 | OsCMeo_01g0009160.02 | Chr01 | 7516049 | 7519290 | + | IsoSeq | ||
| CDS seq | agccgagtacactcgttcagacatggagctctcgtcgcttgctgctctgttgcactcacccctcctccttgccgtgctcctgctcgtcttctcatggctgatcgtctcgtcgaccaagaagaggcctcctccgccctgcggcgatggcggccggcggctgccgctgccaccgtcgccgccgggtgtcccgctactcgggcacctcccgcttcttggcaccttgccgcaccggaagctccggtcgatggccgaggcgcacggcccggtgatgctgctgcggctcggccgcgtgcccgccgtcgtggcgtcgtcggcggccgc
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| Protein seq | SRVHSFRHGALVACCSVALTPPPCRAPARLLMADRLVDQEEASSALRRWRPAAAAATVAAGCPATRAPPASWHLAAPEAPVDGRGARPGDAAAARPRARRRGVVGGR |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.699528 | 0.0 | 1.015152 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0227800 | RBH | 2.465493 | 3.515313 | 2.946192 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g12760 | RBH | 0.0 | 0.0 | 0.265602 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0227400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0009130 | SBH | 0.090832 | 1.338847 | 0.647150 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0020330 | RBH | 0.179635 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0020660 | RBH | 0.558748 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0020050 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0019940 | RBH | 1.507343 | 0.0 | 4.955079 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0115200 | RBH | 4.551184 | 0.5310895 | 0.176884 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0008720 | RBH | 0.000000 | 0.0 | 0.255033 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0115000 | RBH | 4.3759025 | 2.2542725 | 0.011638 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0008620 | RBH | 0.317133 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0008790 | RBH | 0.316430 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0008740 | RBH | 2.980054 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0008800 | RBH | 0.072973 | 0.0 | 0.530393 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0019850 | RBH | 0.005831 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G008780 | RBH | 0.610610 | 0.0 | 0.584088 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0008650 | RBH | 0.761502 | 0.0 | 5.163616 |
