Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_12g0006420 | OGI:12066600 | 4/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr12:5277364-5277711 | ||||||||
| Gene Symbol | RLCK373, OsRLCK373 | ||||||||||
| DNA seq | atgtggcgcaagtacgatctgccgcccaggctcaggagcgacgaccaccatgctgtggccacgacgacggttgacgtcatcaaggagcggcctgtgaggttcagctcgccgcagttgcgggaaatcactggcaactacgcggagaggcttggcgccgggggtttcggggtggtgtacaaagggcagctCcccggcggtctggcggtggccgtgaaggtccttggtagcgacatggggaggcgcgcggaggagcagttaatggcggagatcggcaccatcggtaggacgtctcatgccaacctcgtcatgctctacggcttctgcttcgacgccgacctcaaggcgtga |
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| CDS seq | atgtggcgcaagtacgatctgccgcccaggctcaggagcgacgaccaccatgctgtggccacgacgacggttgacgtcatcaaggagcggcctgtgaggttcagctcgccgcagttgcgggaaatcactggcaactacgcggagaggcttggcgccgggggtttcggggtggtgtacaaagggcagctCcccggcggtctggcggtggccgtgaaggtccttggtagcgacatggggaggcgcgcggaggagcagttaatggcggagatcggcaccatcggtaggacgtctcatgccaacctcgtcatgctctacggcttctgcttcgacgccgacctcaaggcgtga |
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| Protein seq | MWRKYDLPPRLRSDDHHAVATTTVDVIKERPVRFSSPQLREITGNYAERLGAGGFGVVYKGQLPGGLAVAVKVLGSDMGRRAEEQLMAEIGTIGRTSHANLVMLYGFCFDADLKA |
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| Function | Rust resistance kinase Lr10 [UniProtKB/Swiss-Prot:P93604] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_12g0006420 | OsLaMu_12g0006420.01 | Chr12 | 5277364 | 5277711 | + | NAM | ||
| CDS seq | atgtggcgcaagtacgatctgccgcccaggctcaggagcgacgaccaccatgctgtggccacgacgacggttgacgtcatcaaggagcggcctgtgaggttcagctcgccgcagttgcgggaaatcactggcaactacgcggagaggcttggcgccgggggtttcggggtggtgtacaaagggcagctCcccggcggtctggcggtggccgtgaaggtccttggtagcgacatggggaggcgcgcggaggagcagttaatggcggagatcggcaccatcggtaggacgtctcatgccaacctcgtcatgctctacggcttctgcttcgacgccgacctcaaggcgtga
More
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| Protein seq | MWRKYDLPPRLRSDDHHAVATTTVDVIKERPVRFSSPQLREITGNYAERLGAGGFGVVYKGQLPGGLAVAVKVLGSDMGRRAEEQLMAEIGTIGRTSHANLVMLYGFCFDADLKA |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0611100 | RBH | 0.088330 | 0.432825 | 0.750606 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g25510 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0611100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0020310 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0020410 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0012640 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0012380 | SBH | 0.039118 | 0.055076 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0012660 | SBH | 0.0 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0026500 | SBH | 0.018304 | 0.241346 | 0.0178175 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0012550 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0027500 | SBH | 0 | 0.319316 | 0.0165915 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0012650 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0012770 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0012400 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0069880 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0008800 | SBH | 0.070012 | 2.714940 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G013780 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0001870 | SBH | 0.426099 | 14.558523 | 13.426946 |
