Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os11g25510 | OGI:11041070 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr11:14525685-14527210 | ||||||||
| Gene Symbol | RLCK326, OsRLCK326 | ||||||||||
| DNA seq | AACTCGACCAGTTGGATCGACATGTCGTCGTCGTCGTCAGATGTCATATCTGGTGGTAACATCGCCGTAGCCATCGGTACGCGCCATGGATCATTTGATCGATTCCCTAGCTCTAGCTCCTTTTTGATCGATCTGATCGATTCATATAGCTAGCTAGCTAGATAGTTTGATTATTATTTGCGTTTTGCAGTGTCCGTGATCACAGGCGGCATAGTAGTCATCGTTGTTGCCATTCTCATCTACAAGTGCTGCAAGCTGCGCATGTGGCGCAAGTACGGCCTCTCGCCGCCGGAATTACCGGCATCGCAGCCGCCCAGGCCCAGGAGCGACGACGACCGTGCTGTGGCCGCGCTGACCACGACGACGGTTGACGTCATCAAGGAGCGGCCTGTGAGGTTCAGCTCGCCGCAGTTGCGGGAAATGACTGGCGACTACGCGGAGAGGCTTGGCGCCGGGGGTTTCGGGGTGGTGTACAAAGGGCAGATCCCCGGCGGTCTGGCAGTGGCCGTGAAGGTCCTTGGTAGCGACATGGGGAGGCGCGCAGAGGAGCAGTTCATGGCGGAGATCGGCACCATCGGTAGGACGTCGCATGTCAACCTCGTCATGCTCTACGGCTTCTGCTTCGACGCCGACCTCAAGGCGCTTGTGTACGAGTGCATGCCCAAGGGCTCGCTGGAGCGCTACCTGTTCTTCCTCGACGAACAGGAGCAGGGCCTCGGCTTCCACAAGCTGTTCCGCATCGCCGTTGGGACTGCCAAGGCGATCCGGTACCTCCACGACGAGTGCGCGCGGCGGATCATCCACTACGACATCAAGCCCGGCAATGTACTCCTGGACGAGGAGTTGGAGCCCAAGGTGGGGGACTTCGGGCTGGCGAGGCTGTGCGACAGGGAGAAGACGCACCTGACGATGACGGGCGGCGGGAGGGGCACCCCGGGCTACGCGGCGCCGGAGCTGTGGAAGCCGGTGCCGGTGACGCACAAGTGCGACGTGTACAGCTACGGCATGTTGCTGTTCGAGATCCTGGGCTACATGCATGGTATGGAGAGCCAGGAGCAGTGGTATCCCCGGTGGGTGTGGCAGCGCCTGGAGCATGGCGAGACGGAGGCGGTGGTGGCGCGGGCGCGGGCGCAGGGAGGCGCCGCCGCCGCCGACAAGGCGGAGCGGATGTGCACGGTGGCCCTCTGGTGCGTGCAGTACAGGCCGGAGGACCGACCGTCCATGGCCAGCGTGGTTCAGATGCTAGAGGCCCATGACCACGTCGCAGCGCCCACCGTCAGCCCCTTTGCTCATCTCGACCCCCAAGTCATCATCACCACTTCCTCTTTCTCCTCGCTGTTACACACGGATGACACCACTGGAGGCACCACCTCCACTCACATCTCACATCACATCACTTAATTACTTCTTCCAAAAATTCTTTGCTAACTACTCCCTCAATTCCATTTTAAGTGCAAATATTAGATTTCATGCACAACTTTAATTATTCGTCTTATTTAAAAAAAATATGATTAGTATTTTTATTA
More
|
||||||||||
| CDS seq | ATGTGGCGCAAGTACGGCCTCTCGCCGCCGGAATTACCGGCATCGCAGCCGCCCAGGCCCAGGAGCGACGACGACCGTGCTGTGGCCGCGCTGACCACGACGACGGTTGACGTCATCAAGGAGCGGCCTGTGAGGTTCAGCTCGCCGCAGTTGCGGGAAATGACTGGCGACTACGCGGAGAGGCTTGGCGCCGGGGGTTTCGGGGTGGTGTACAAAGGGCAGATCCCCGGCGGTCTGGCAGTGGCCGTGAAGGTCCTTGGTAGCGACATGGGGAGGCGCGCAGAGGAGCAGTTCATGGCGGAGATCGGCACCATCGGTAGGACGTCGCATGTCAACCTCGTCATGCTCTACGGCTTCTGCTTCGACGCCGACCTCAAGGCGCTTGTGTACGAGTGCATGCCCAAGGGCTCGCTGGAGCGCTACCTGTTCTTCCTCGACGAACAGGAGCAGGGCCTCGGCTTCCACAAGCTGTTCCGCATCGCCGTTGGGACTGCCAAGGCGATCCGGTACCTCCACGACGAGTGCGCGCGGCGGATCATCCACTACGACATCAAGCCCGGCAATGTACTCCTGGACGAGGAGTTGGAGCCCAAGGTGGGGGACTTCGGGCTGGCGAGGCTGTGCGACAGGGAGAAGACGCACCTGACGATGACGGGCGGCGGGAGGGGCACCCCGGGCTACGCGGCGCCGGAGCTGTGGAAGCCGGTGCCGGTGACGCACAAGTGCGACGTGTACAGCTACGGCATGTTGCTGTTCGAGATCCTGGGCTACATGCATGGTATGGAGAGCCAGGAGCAGTGGTATCCCCGGTGGGTGTGGCAGCGCCTGGAGCATGGCGAGACGGAGGCGGTGGTGGCGCGGGCGCGGGCGCAGGGAGGCGCCGCCGCCGCCGACAAGGCGGAGCGGATGTGCACGGTGGCCCTCTGGTGCGTGCAGTACAGGCCGGAGGACCGACCGTCCATGGCCAGCGTGGTTCAGATGCTAGAGGCCCATGACCACGTCGCAGCGCCCACCGTCAGCCCCTTTGCTCATCTCGACCCCCAAGTCATCATCACCACTTCCTCTTTCTCCTCGCTGTTACACACGGATGACACCACTGGAGGCACCACCTCCACTCACATCTCACATCACATCACTTAA
More
|
||||||||||
| Protein seq | MWRKYGLSPPELPASQPPRPRSDDDRAVAALTTTTVDVIKERPVRFSSPQLREMTGDYAERLGAGGFGVVYKGQIPGGLAVAVKVLGSDMGRRAEEQFMAEIGTIGRTSHVNLVMLYGFCFDADLKALVYECMPKGSLERYLFFLDEQEQGLGFHKLFRIAVGTAKAIRYLHDECARRIIHYDIKPGNVLLDEELEPKVGDFGLARLCDREKTHLTMTGGGRGTPGYAAPELWKPVPVTHKCDVYSYGMLLFEILGYMHGMESQEQWYPRWVWQRLEHGETEAVVARARAQGGAAAADKAERMCTVALWCVQYRPEDRPSMASVVQMLEAHDHVAAPTVSPFAHLDPQVIITTSSFSSLLHTDDTTGGTTSTHISHHIT |
||||||||||
| Function | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.2 [UniProtKB/Swiss-Prot:F4KA50] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os11g25510 | LOC_Os11g25510.1 | Chr11 | 14525685 | 14527210 | + | MSU_osa1r7 | ||
| CDS seq | ATGTGGCGCAAGTACGGCCTCTCGCCGCCGGAATTACCGGCATCGCAGCCGCCCAGGCCCAGGAGCGACGACGACCGTGCTGTGGCCGCGCTGACCACGACGACGGTTGACGTCATCAAGGAGCGGCCTGTGAGGTTCAGCTCGCCGCAGTTGCGGGAAATGACTGGCGACTACGCGGAGAGGCTTGGCGCCGGGGGTTTCGGGGTGGTGTACAAAGGGCAGATCCCCGGCGGTCTGGCAGTGGCCGTGAAGGTCCTTGGTAGCGACATGGGGAGGCGCGCAGAGGAGCAGTTCATGGCGGAGATCGGCACCATCGGTAGGACGTCGCATGTCAACCTCGTCATGCTCTACGGCTTCTGCTTCGACGCCGACCTCAAGGCGCTTGTGTACGAGTGCATGCCCAAGGGCTCGCTGGAGCGCTACCTGTTCTTCCTCGACGAACAGGAGCAGGGCCTCGGCTTCCACAAGCTGTTCCGCATCGCCGTTGGGACTGCCAAGGCGATCCGGTACCTCCACGACGAGTGCGCGCGGCGGATCATCCACTACGACATCAAGCCCGGCAATGTACTCCTGGACGAGGAGTTGGAGCCCAAGGTGGGGGACTTCGGGCTGGCGAGGCTGTGCGACAGGGAGAAGACGCACCTGACGATGACGGGCGGCGGGAGGGGCACCCCGGGCTACGCGGCGCCGGAGCTGTGGAAGCCGGTGCCGGTGACGCACAAGTGCGACGTGTACAGCTACGGCATGTTGCTGTTCGAGATCCTGGGCTACATGCATGGTATGGAGAGCCAGGAGCAGTGGTATCCCCGGTGGGTGTGGCAGCGCCTGGAGCATGGCGAGACGGAGGCGGTGGTGGCGCGGGCGCGGGCGCAGGGAGGCGCCGCCGCCGCCGACAAGGCGGAGCGGATGTGCACGGTGGCCCTCTGGTGCGTGCAGTACAGGCCGGAGGACCGACCGTCCATGGCCAGCGTGGTTCAGATGCTAGAGGCCCATGACCACGTCGCAGCGCCCACCGTCAGCCCCTTTGCTCATCTCGACCCCCAAGTCATCATCACCACTTCCTCTTTCTCCTCGCTGTTACACACGGATGACACCACTGGAGGCACCACCTCCACTCACATCTCACATCACATCACTTAA
More
|
|||||||
| Protein seq | MWRKYGLSPPELPASQPPRPRSDDDRAVAALTTTTVDVIKERPVRFSSPQLREMTGDYAERLGAGGFGVVYKGQIPGGLAVAVKVLGSDMGRRAEEQFMAEIGTIGRTSHVNLVMLYGFCFDADLKALVYECMPKGSLERYLFFLDEQEQGLGFHKLFRIAVGTAKAIRYLHDECARRIIHYDIKPGNVLLDEELEPKVGDFGLARLCDREKTHLTMTGGGRGTPGYAAPELWKPVPVTHKCDVYSYGMLLFEILGYMHGMESQEQWYPRWVWQRLEHGETEAVVARARAQGGAAAADKAERMCTVALWCVQYRPEDRPSMASVVQMLEAHDHVAAPTVSPFAHLDPQVIITTSSFSSLLHTDDTTGGTTSTHISHHIT
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0441900 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0441900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0012700 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0012580 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0012640 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0012380 | RBH | 0.039118 | 0.055076 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0012660 | RBH | 0.0 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0214900 | RBH | 0.055354 | 0.9038395 | 0.50294 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0012550 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0228700 | RBH | 0.060179 | 2.39356 | 0.4379345 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0012650 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0012770 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0012400 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0012260 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0012580 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G012440 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0012520 | RBH | 0.0 | 0.0 | 0.0 |
