Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_11g0015080 | OGI:11054970 | 13/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr11:20375484-20383554 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atgcctcgcaagaagccaacttcgctttcgccgggaacatcccggtttcctccaagccctggaatctacaagtttcgaccggctatcctttgagactccgcgaggcacaacagattcagcgcacgcaacagattcagcgtactagaagccatcagcgacgaggacgacgattcgttgacggagcgagactccaccacttcagacagctgtggcgaggacaattcgcggaaagacccaccgctggtttgccattacttcttctctgcatcaacttatttatctaggatttacaaattgtttgtggatgtggccttattgtgtgattttagtgaatgaattgctagcttgtgataatagtaatgttctttttttttccttttccttatgccagaattctctacttcttttggtggcatatcatcaattttaatataatgaataataaataatatggatgttttcaattgtcacagatgaaggatggagagattgtgaatcccttggtgaggacattgctcgagctgttcagcgaggaacaaatttctgaaatcccactcatggaaacatatattcgcagatgtgtaagtaacaagttttatgctagattgtgatgggtaatggaatcttctaaatcttgttccacaaccgtgatggaaacatatattcaatcttcaaaacctgtgatgttgtttaattatttttttagtttttaagctggtagatatatttaaacttgcacattgacatgttatatccatgtatggatttcatctttaatgtattatgtttgttatgttatccatgtatgactttcatctctaatgtatgtaatgtattatgtttgttctccagggtatcagtgaaggaatgggatctcatcttattgaagagaataactttctctttggagctttcacttctatagtggcttgtccatggtacttgacaatgacatcatttttttctttcataacatggttttaagtttgctaaatattatattttgtcacaggattaaaaaagatacaatactgctttccagcatacttctccgtttatcagaaatatggaaccaatcagaatgggtgacaaatctattggacttttttgaagatgctcagttcaggacatctgtgtacaatgttgttgcatttttcgaggatcagctcacaatgtccacgacagaaaattctaatggaatcgaccataaggagaaattaagctattcaactttgtttgcccttcttccactgtaacttcccttactcttaaaggttaaaaaaactaaataccatacttttctaaaattgagattatagcataccggaagaatttagttatttgtagtaatttcatatttattacaactgttctttttttttttgcagcttcttcagtatgtgcattcactttggacggatgaagttgcttctaacgtatcagaaaaacttgaaggagctaaatttattatacaagctgagaagccatttggtattattgaagaaactactgaaatgctagatatgaatgaggaagagttgctggaaaatgagataaggaagtggctaaaaaagatccgccaaactgggtatgttttttgctagcaatattcactgtttatagcattcttaatgagtaggttcaataaatatcatgctgggctatttaaagttaccactttaaaactctagtctgaatgcatattacttggcaatagatccacaaaatctaaagtgaagcttcacttttgattctaatatataataatagtttaaggttacattaagatgtgatgggaagaagtaatatccctttccaatatattttggaagttatagcttcatttgaacattgtgctataatatcggttcagcgaaaacttctatgatttttaaagtaaagagatgttttgcttgtctatgttatgtttattttttttaatttttttgtgtttacataaatattaattttattatattctgtaggtataatgtcataggtatgtgtgtgtgtcttgagggagcattttataaacttttggacaacatttctgtttgtggtgccttactgaaggacctagaagtaatggagttccgtcatttgactatgcttattaaacatacaattgttccgttggtgaaaaattgtcctgctgaactttggccgaagtggatagatatgattttacagccagtgtttcactactgtgatgatacattagatggttcatggtgcagttttttgtacaaggaaacaatgctcgttcctgataaattctgtcatatttctttcacggaagaaaagattgaggaattaggaaaggatcatctttttgaggtgactcgtgaaatatcatatatgcttgctgtaatggcactgcctgaattaaatggtggaatagcaaatgagcatcaatctattgtcagcatagtagaaacatctgcagatttggaatctacttgttcaagctcccttgttgggtaagatggtttaacagtagcttataattatatattttgagatgttatgtagttattctgttgtattttggaagttaaaagacaatgaaattgtttattttgcaggtatctcttataccatgatgatcttagaccttcaatactaaggctaatcaataatattattggctattggaaagatagtgaagcaaggattaaagttgtgtcattttgtcatatgctgatccaacttgctatttctacgcacaatgataaacttatatcttttgttcaagataatttaattccaatggttgtccgatgcttaatatttgagccaatatcaaacaataatgatcttcttcttctttgtgaagatgcataccgctgcatacaaagagaggtaattcattagcttcttgtagtccctccattttggcaggtgcaattattcgttatcttggttgatacatgagaattctgtgcttattttatgagcaatgctatataaatataattattattagtattgtgcaatattttgactgctccgattggcacaatggtttttcccttttcttttttggacaaaaatgaacccttttattggactcaagtatttgtttatttcaggaatcagtaagtgaaggtcaacatgatggaaatagtgcagaaatatttgaaaactggttgtcaaagcaaatgatagtggctcattatgaacactcacctcctgatgaactcgaagactttgtgtgcatctgggaggtattttgcctcttttttttttttttttggggggggggtctatgttaatccttgtgattttaattttgtatgaaatgttttccttacttgaacaatatttttccccctcaaatcagattgaagaagaatttactgcttatcttcacacctatactgaaatgttgcataaagtggatggaatcggtgatacaatagaggtaaattatttatttatccactcccccataaaaaaaaattctttcaagtgaagaaatgaaaaagtgagttgcatttataatgttggtgcagtggcagatgtggaatttcagttgggaaattaacagttgttgctacgcaatgctttaaatcacttccagcctattttcttttcttaatatttaagcgactgtttcccacaaaatttgaaaataaactaatgatatccgcgttataaatttatgtacatgtttctttggcacacgagaaatcttaaacttgcgtatgtctgatgtaactatatatttcttatttttgggagggagaattgaagtctgtttacctgtttgcaggatgtttatcttaggtgtcctatcccatttgtgtccaagcatgacaataattgttgtccaatttctaattcatgggccatgtcatctatgctgtcagtaagtatattgatgtacttgcaagtatatctgtgggctgcatactgattatttattttggctctttctgaagcgtaaaataacttcaatgtattgcaagagagagactgaacaaaaattcaagtttctttgtaaacttatcacatttaaaccctacattaaggtatgtgtattatccattatccttagcaaattaagatggtactacacctagcagaaacaccataatgtatacgtatttggacattttacagtgttctggttatgatgagagtgtgcaagagcttgtggatgacgattcagaggtttggtctgcacttcctggatgttgtaggcaggagacacttgaggtaggcattttgtcatgtatgtgctaatgcttaaatgcactctgttgaatattggccaaattactctccgctttcagctcttttgtagaatattagatccctgggagcctcaattccatcctctgatacgtgaggtaatgatgaaaatttacatgttctctttctatttattcttgagtttatcaaattaaatgtgtcttcattgtgtaggatgacaaggaaatgctacgtgaaatagcttacctattaacttcccgggaagatattcattgtgtgcaggtatctttacctttgagtttttacgttctcaggaacatattcattttgtgcaggtatgctttacctttgagttctcatgctcttgagtacttaatgaaactagtgttcttctctgcagtccttccagcctgtctccagcgacttttcgctgcatttacaaccttatgcccagaattatattgaggtcaagaacgcaagttctggggtatgctatacaatcatactaatactaatgtcaagcatatttgtgcttttcatcagaaaataaacaattctgcttagatgctattcactgtatatgttgttatcctactagcttgtagctcatgggtatattttttttttgttgttgccggcttctctagaagcattaagatgatcatagcagtggtagcttcaatgttatttgctggcagatagtttgtagttaataattaaaaatcaccatatatgaccatctgctcaagtaccatgttcggttattggttactcccccagtatgacagggtaaaagaacaaataaggttgcatgaagcatttgatacacatttggcctctggtgcattggatgatcatgttcgtcagattagttcttcaaaggtaggaaatatattatgaacttattgtgcgtacaaaaacagggctaccacattttgctcaactgcttattaattgttgtacctatggttctcaggataatttcgtgaagattatgcttgatgatgatactttgcatagtcagtttatagatctggattatgatctcctgaaattgtcacatgaggtgctattttcctgacatattttccttattcacaaattatttcctaagtattttcatgataactttgtgcccttttacagcgacgagctaaacttcttagtaaacaagatcaattatgcttatattacaaacacatgaaatgtgctgtcgtaaatttgcaggtatgtgatctatatgtcctgcttgtccttaatgttcactaaagttacctcaaagttttttttcccctcaaattactagcattcttgttgttacttaatcacggagtgaagttaatttgttaatttgtatcgctctatgtatttaacatgctatagcatcctatctatatgtttcattctcattttttttacttgatactgcaatatcacatgactatgtcgaaagctaaaagctgttccaaatgagttaccagttatatcatttgccaagtaggctatgcatttcacttttgctaacaaaagagtcaatgtaaaatttgtggttgccattttccatatagtttttgaaccaagattcaaggatctagtggatagtttggcatatttttgtttatttttttatttgtacgatgttttctatttttttaattattttggtgtaataacgaaacaaattgtctgttgatgcccattgcttccaggtttaacacttgaaaaacgtgttgaagccaacatgcattaatttatgaagtgacaactatatgagcttggatatggtttcttagctaattgtgattgtataaattttcagcatagagatagacttgaaagtttgatatgtgagctcgagtcagaaggtttcttccgtgtggatgatgattctattgaatgggtacttatggcactaatagtgttttacttttgctttatagtgcatgcaaaatcaataagcgctttatctaattctatgttttattttttatatgcttgcatttgtaggaaaaggaacacttttcagaacttgtggacgaattcaatgagcatatttttgctgggattcaccttccaaaatattatgttattcgtggagttatggtctgatcttttctcatgcctcaccatcgtttgtctgttaactaaaatagtgaaacctgattcaatgtgttaaatatcaggattatcgggaaatgttacatatgaaggatagcacttgggatgatgctttcacagtggtaggatatgccatctctttgaattggtggattttccttgtgaaacaagtccatattatcatttattggtccatattatcatttattggtttgtttcaggttgttggtggagcattctgtagatggatggaagatcgtgatctggtattgaaatatgctcacaatttgcctattggttctattgtatttctttatattttattcatgttcgttcattttgttagttttggatggagacaagatactataggcatcgttactatgacatcattcaagagccagtaaaaatggtattgacccatattacctccatcttctttcttgctccagagaacctggagacaccattctaaatactggcaggttttggtcaatataattgctttgtcaatgaacttattttcatgctaaggaaacatccaaattctagaaaaaatgaaaacattcaaaaagttaaacgaaactaagaaatcatgcagcatggtctaccaggaaacaaggcacatatagtttcctagtcagttctcatattttattttaattcatctaaaatttttatccttgctcagattcctactagctactccctacattcccaaatataaagcatttctagattcaaaatttgtatgtaatataagcatttcccacacttcaattcctgctaaacaatctagaaatgcttatatttgggaacggactcctcactgttcagaaatgctgccaatgaaaatatcctactagtttctattcacatatagatgctataatattactctgcagcaagtcatacatagtgtttcatacctttgttgggctagatgttaggcagagagtgatctggtattgaaatgtgcctttgctgtgcaaatccttcctgcttgactacttgttgacctttaatttagaggcaatctagcttaaatacgtactactacatgtgtatcctaagttcctaacatcacgtcacattgttttctattagatatggaggactacaggtgatgagaatgagatgacagttggacacactacaaggtagtttgtgttttattactttccttctttattattgttactattgtataataataaagactaccgatccatctgtaagaagttgccaatttccatgtacatcttgattcaggttctgcccttttctattgatctaaccaaacaatctactatatagacatgacatatttgtatgcgaagtcttcaatttatttatattataatttcccgtcgtttgttttcgtgtcgtagcaggattatagatggcaacggagaattcaccgccggaatgaactagacttggctcaagactgctgcaacacgaaatcaaggagtacctgtctgtcaatcttctaggactctagggcgacaatagtaggcatacaaagttatcaaccaaacctccatggttccagtctcgcacaccaagttttgtgatcacctggaattaagcagagctggatgcttttgattaatcaagtccacctgtaccacaaacacacttgcacatgtgtatatatcctaattttcatcatgttaccaggctacattttgacatatacagacacacccacaacgtgcaaaaaagttcaagc
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| CDS seq | atgcctcgcaagaagccaacttcgctttcgccgggaacatcccggtttcctccaagccctggaatctacaacgcacgcaacagattcagcgtactagaagccatcagcgacgaggacgacgattcgttgacggagcgagactccaccacttcagacagctgtggcgaggacaattcgcggaaagacccaccgctgatgaaggatggagagattgtgaatcccttggtgaggacattgctcgagctgttcagcgaggaacaaatttctgaaatcccactcatggaaacatatattcgcagatgtggtatcagtgaaggaatgggatctcatcttattgaagagaataactttctctttggagctttcacttctatagtggcttgtccatggattaaaaaagatacaatactgctttccagcatacttctccgtttatcagaaatatggaaccaatcagaatgggtgacaaatctattggacttttttgaagatgctcagttcaggacatctgtgtacaatcttcttcagtatgtgcattcactttggacggatgaagttgcttctaacgtatcagaaaaacttgaaggagctaaatttattatacaagctgagaagccatttggtatgtgtgtgtgtcttgagggagcattttataaacttttggacaacatttctgtttgtggtgccttactgaaggacctagaagtaatggagttccgtcatttgactatgcttattaaacatacaattgttccgttggtgaaaaattgtcctgctgaactttggccgaagtggatagatatgattttacagccagtgtttcactactgtgatgatacattagatggttcatggtgcagttttttgtacaaggaaacaatgctcgttcctgataaattctgtcatatttctttcacggaagaaaagattgaggaattaggaaaggatcatctttttgaggtgactcgtgaaatatcatatatgcttgctgtaatggcactgcctgaattaaatggtggaatagcaaatgagcatcaatctattgtcagcatagtagaaacatctgcagatttggaatctacttgttcaagctcccttgttgggtatctcttataccatgatgatcttagaccttcaatactaaggctaatcaataatattattggctattggaaagatagtgaagcaaggattaaagttgtgtcattttgtcatatgctgatccaacttgctatttctacgcacaatgataaacttatatcttttgttcaagataatttaattccaatggttgtccgatgcttaatatttgagccaatatcaaacaataatgatcttcttcttctttgtgaagatgcataccgctgcatacaaagagaggaatcagtaagtgaaggtcaacatgatggaaatagtgcagaaatatttgaaaactggttgtcaaagcaaatgatagtggctcattatgaacactcacctcctgatgaactcgaagactttgtgtgcatctgggagattgaagaagaatttactgcttatcttcacacctatactgaaatgttgcataaagtggatggaatcggtgatacaatagaggatgtttatcttaggtgtcctatcccatttgtgtccaagcatgacaataattgttgtccaatttctaattcatgggccatgtcatctatgctgtcacgtaaaataacttcaatgtattgcaagagagagactgaacaaaaattcaagtttctttgtaaacttatcacatttaaaccctacattaagtgttctggttatgatgagagtgtgcaagagcttgtggatgacgattcagaggtttggtctgcacttcctggatgttgtaggcaggagacacttgaggatgacaaggaaatgctacgtgaaatagcttacctattaacttcccgggaagatattcattgtgtgcagtccttccagcctgtctccagcgacttttcgctgcatttacaaccttatgcccagaattatattgaggtcaagaacgcaagttctgggtatgacagggtaaaagaacaaataaggttgcatgaagcatttgatacacatttggcctctggtgcattggatgatcatgttcgtcagattagttcttcaaaggataatttcgtgaagattatgcttgatgatgatactttgcatagtcagtttatagatctggattatgatctcctgaaattgtcacatgagcgacgagctaaacttcttagtaaacaagatcaattatgcttatattacaaacacatgaaatgtgctgtcgtaaatttgcagcatagagatagacttgaaagtttgatatgtgagctcgagtcagaaggtttcttccgtgtggatgatgattctattgaatgggaaaaggaacacttttcagaacttgtggacgaattcaatgagcatatttttgctgggattcaccttccaaaatattatgttattcgtggagttatggattatcgggaaatgttacatatgaaggatagcacttgggatgatgctttcacagtggttgttggtggagcattctgtagatggatggaagatcgtgatctgttttggatggagacaagatactataggcatcgttactatgacatcattcaagagccagtaaaaatgatatggaggactacaggtgatgagaatgagatgacagttggacacactacaaggattatagatggcaacggagaattcaccgccggaatgaactag
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| Protein seq | MPRKKPTSLSPGTSRFPPSPGIYNARNRFSVLEAISDEDDDSLTERDSTTSDSCGEDNSRKDPPLMKDGEIVNPLVRTLLELFSEEQISEIPLMETYIRRCGISEGMGSHLIEENNFLFGAFTSIVACPWIKKDTILLSSILLRLSEIWNQSEWVTNLLDFFEDAQFRTSVYNLLQYVHSLWTDEVASNVSEKLEGAKFIIQAEKPFGMCVCLEGAFYKLLDNISVCGALLKDLEVMEFRHLTMLIKHTIVPLVKNCPAELWPKWIDMILQPVFHYCDDTLDGSWCSFLYKETMLVPDKFCHISFTEEKIEELGKDHLFEVTREISYMLAVMALPELNGGIANEHQSIVSIVETSADLESTCSSSLVGYLLYHDDLRPSILRLINNIIGYWKDSEARIKVVSFCHMLIQLAISTHNDKLISFVQDNLIPMVVRCLIFEPISNNNDLLLLCEDAYRCIQREESVSEGQHDGNSAEIFENWLSKQMIVAHYEHSPPDELEDFVCIWEIEEEFTAYLHTYTEMLHKVDGIGDTIEDVYLRCPIPFVSKHDNNCCPISNSWAMSSMLSRKITSMYCKRETEQKFKFLCKLITFKPYIKCSGYDESVQELVDDDSEVWSALPGCCRQETLEDDKEMLREIAYLLTSREDIHCVQSFQPVSSDFSLHLQPYAQNYIEVKNASSGYDRVKEQIRLHEAFDTHLASGALDDHVRQISSSKDNFVKIMLDDDTLHSQFIDLDYDLLKLSHERRAKLLSKQDQLCLYYKHMKCAVVNLQHRDRLESLICELESEGFFRVDDDSIEWEKEHFSELVDEFNEHIFAGIHLPKYYVIRGVMDYREMLHMKDSTWDDAFTVVVGGAFCRWMEDRDLFWMETRYYRHRYYDIIQEPVKMIWRTTGDENEMTVGHTTRIIDGNGEFTAGMN |
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| Function | Protein HASTY 1 [UniProtKB/Swiss-Prot:Q0WP44] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_11g0015080 | OsLaMu_11g0015080.03 | Chr11 | 20375484 | 20383554 | + | NAM | ||
| CDS seq | atgcctcgcaagaagccaacttcgctttcgccgggaacatcccggtttcctccaagccctggaatctacaacgcacgcaacagattcagcgtactagaagccatcagcgacgaggacgacgattcgttgacggagcgagactccaccacttcagacagctgtggcgaggacaattcgcggaaagacccaccgctgatgaaggatggagagattgtgaatcccttggtgaggacattgctcgagctgttcagcgaggaacaaatttctgaaatcccactcatggaaacatatattcgcagatgtggtatcagtgaaggaatgggatctcatcttattgaagagaataactttctctttggagctttcacttctatagtggcttgtccatggattaaaaaagatacaatactgctttccagcatacttctccgtttatcagaaatatggaaccaatcagaatgggtgacaaatctattggacttttttgaagatgctcagttcaggacatctgtgtacaatcttcttcagtatgtgcattcactttggacggatgaagttgcttctaacgtatcagaaaaacttgaaggagctaaatttattatacaagctgagaagccatttggtatgtgtgtgtgtcttgagggagcattttataaacttttggacaacatttctgtttgtggtgccttactgaaggacctagaagtaatggagttccgtcatttgactatgcttattaaacatacaattgttccgttggtgaaaaattgtcctgctgaactttggccgaagtggatagatatgattttacagccagtgtttcactactgtgatgatacattagatggttcatggtgcagttttttgtacaaggaaacaatgctcgttcctgataaattctgtcatatttctttcacggaagaaaagattgaggaattaggaaaggatcatctttttgaggtgactcgtgaaatatcatatatgcttgctgtaatggcactgcctgaattaaatggtggaatagcaaatgagcatcaatctattgtcagcatagtagaaacatctgcagatttggaatctacttgttcaagctcccttgttgggtatctcttataccatgatgatcttagaccttcaatactaaggctaatcaataatattattggctattggaaagatagtgaagcaaggattaaagttgtgtcattttgtcatatgctgatccaacttgctatttctacgcacaatgataaacttatatcttttgttcaagataatttaattccaatggttgtccgatgcttaatatttgagccaatatcaaacaataatgatcttcttcttctttgtgaagatgcataccgctgcatacaaagagaggaatcagtaagtgaaggtcaacatgatggaaatagtgcagaaatatttgaaaactggttgtcaaagcaaatgatagtggctcattatgaacactcacctcctgatgaactcgaagactttgtgtgcatctgggagattgaagaagaatttactgcttatcttcacacctatactgaaatgttgcataaagtggatggaatcggtgatacaatagaggatgtttatcttaggtgtcctatcccatttgtgtccaagcatgacaataattgttgtccaatttctaattcatgggccatgtcatctatgctgtcatgttctggttatgatgagagtgtgcaagagcttgtggatgacgattcagaggtttggtctgcacttcctggatgttgtaggcaggagacacttgaggatgacaaggaaatgctacgtgaaatagcttacctattaacttcccgggaagatattcattgtgtgcagtccttccagcctgtctccagcgacttttcgctgcatttacaaccttatgcccagaattatattgaggtcaagaacgcaagttctgggtatgacagggtaaaagaacaaataaggttgcatgaagcatttgatacacatttggcctctggtgcattggatgatcatgttcgtcagattagttcttcaaaggataatttcgtgaagattatgcttgatgatgatactttgcatagtcagtttatagatctggattatgatctcctgaaattgtcacatgagcgacgagctaaacttcttagtaaacaagatcaattatgcttatattacaaacacatgaaatgtgctgtcgtaaatttgcagcatagagatagacttgaaagtttgatatgtgagctcgagtcagaaggtttcttccgtgtggatgatgattctattgaatgggaaaaggaacacttttcagaacttgtggacgaattcaatgagcatatttttgctgggattcaccttccaaaatattatgttattcgtggagttatggttgttggtggagcattctgtagatggatggaagatcgtgatctgttttggatggagacaagatactataggcatcgttactatgacatcattcaagagccaatatggaggactacaggtgatgagaatgagatgacagttggacacactacaaggattatagatggcaacggagaattcaccgccggaatgaactag
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| Protein seq | MPRKKPTSLSPGTSRFPPSPGIYNARNRFSVLEAISDEDDDSLTERDSTTSDSCGEDNSRKDPPLMKDGEIVNPLVRTLLELFSEEQISEIPLMETYIRRCGISEGMGSHLIEENNFLFGAFTSIVACPWIKKDTILLSSILLRLSEIWNQSEWVTNLLDFFEDAQFRTSVYNLLQYVHSLWTDEVASNVSEKLEGAKFIIQAEKPFGMCVCLEGAFYKLLDNISVCGALLKDLEVMEFRHLTMLIKHTIVPLVKNCPAELWPKWIDMILQPVFHYCDDTLDGSWCSFLYKETMLVPDKFCHISFTEEKIEELGKDHLFEVTREISYMLAVMALPELNGGIANEHQSIVSIVETSADLESTCSSSLVGYLLYHDDLRPSILRLINNIIGYWKDSEARIKVVSFCHMLIQLAISTHNDKLISFVQDNLIPMVVRCLIFEPISNNNDLLLLCEDAYRCIQREESVSEGQHDGNSAEIFENWLSKQMIVAHYEHSPPDELEDFVCIWEIEEEFTAYLHTYTEMLHKVDGIGDTIEDVYLRCPIPFVSKHDNNCCPISNSWAMSSMLSCSGYDESVQELVDDDSEVWSALPGCCRQETLEDDKEMLREIAYLLTSREDIHCVQSFQPVSSDFSLHLQPYAQNYIEVKNASSGYDRVKEQIRLHEAFDTHLASGALDDHVRQISSSKDNFVKIMLDDDTLHSQFIDLDYDLLKLSHERRAKLLSKQDQLCLYYKHMKCAVVNLQHRDRLESLICELESEGFFRVDDDSIEWEKEHFSELVDEFNEHIFAGIHLPKYYVIRGVMVVGGAFCRWMEDRDLFWMETRYYRHRYYDIIQEPIWRTTGDENEMTVGHTTRIIDGNGEFTAGMN
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_11g0015080 | OsLaMu_11g0015080.01 | Chr11 | 20375484 | 20383554 | + | NAM | ||
| CDS seq | atgcctcgcaagaagccaacttcgctttcgccgggaacatcccggtttcctccaagccctggaatctacaacgcacgcaacagattcagcgtactagaagccatcagcgacgaggacgacgattcgttgacggagcgagactccaccacttcagacagctgtggcgaggacaattcgcggaaagacccaccgctgatgaaggatggagagattgtgaatcccttggtgaggacattgctcgagctgttcagcgaggaacaaatttctgaaatcccactcatggaaacatatattcgcagatgtggtatcagtgaaggaatgggatctcatcttattgaagagaataactttctctttggagctttcacttctatagtggcttgtccatggattaaaaaagatacaatactgctttccagcatacttctccgtttatcagaaatatggaaccaatcagaatgggtgacaaatctattggacttttttgaagatgctcagttcaggacatctgtgtacaatcttcttcagtatgtgcattcactttggacggatgaagttgcttctaacgtatcagaaaaacttgaaggagctaaatttattatacaagctgagaagccatttggtatgtgtgtgtgtcttgagggagcattttataaacttttggacaacatttctgtttgtggtgccttactgaaggacctagaagtaatggagttccgtcatttgactatgcttattaaacatacaattgttccgttggtgaaaaattgtcctgctgaactttggccgaagtggatagatatgattttacagccagtgtttcactactgtgatgatacattagatggttcatggtgcagttttttgtacaaggaaacaatgctcgttcctgataaattctgtcatatttctttcacggaagaaaagattgaggaattaggaaaggatcatctttttgaggtgactcgtgaaatatcatatatgcttgctgtaatggcactgcctgaattaaatggtggaatagcaaatgagcatcaatctattgtcagcatagtagaaacatctgcagatttggaatctacttgttcaagctcccttgttgggtatctcttataccatgatgatcttagaccttcaatactaaggctaatcaataatattattggctattggaaagatagtgaagcaaggattaaagttgtgtcattttgtcatatgctgatccaacttgctatttctacgcacaatgataaacttatatcttttgttcaagataatttaattccaatggttgtccgatgcttaatatttgagccaatatcaaacaataatgatcttcttcttctttgtgaagatgcataccgctgcatacaaagagaggaatcagtaagtgaaggtcaacatgatggaaatagtgcagaaatatttgaaaactggttgtcaaagcaaatgatagtggctcattatgaacactcacctcctgatgaactcgaagactttgtgtgcatctgggagattgaagaagaatttactgcttatcttcacacctatactgaaatgttgcataaagtggatggaatcggtgatacaatagaggatgtttatcttaggtgtcctatcccatttgtgtccaagcatgacaataattgttgtccaatttctaattcatgggccatgtcatctatgctgtcacgtaaaataacttcaatgtattgcaagagagagactgaacaaaaattcaagtttctttgtaaacttatcacatttaaaccctacattaagtgttctggttatgatgagagtgtgcaagagcttgtggatgacgattcagaggtttggtctgcacttcctggatgttgtaggcaggagacacttgaggatgacaaggaaatgctacgtgaaatagcttacctattaacttcccgggaagatattcattgtgtgcagtccttccagcctgtctccagcgacttttcgctgcatttacaaccttatgcccagaattatattgaggtcaagaacgcaagttctgggtatgacagggtaaaagaacaaataaggttgcatgaagcatttgatacacatttggcctctggtgcattggatgatcatgttcgtcagattagttcttcaaaggataatttcgtgaagattatgcttgatgatgatactttgcatagtcagtttatagatctggattatgatctcctgaaattgtcacatgagcgacgagctaaacttcttagtaaacaagatcaattatgcttatattacaaacacatgaaatgtgctgtcgtaaatttgcagcatagagatagacttgaaagtttgatatgtgagctcgagtcagaaggtttcttccgtgtggatgatgattctattgaatgggaaaaggaacacttttcagaacttgtggacgaattcaatgagcatatttttgctgggattcaccttccaaaatattatgttattcgtggagttatggattatcgggaaatgttacatatgaaggatagcacttgggatgatgctttcacagtggttgttggtggagcattctgtagatggatggaagatcgtgatctgatatggaggactacaggtgatgagaatgagatgacagttggacacactacaagcaggattatagatggcaacggagaattcaccgccggaatgaactag
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| Protein seq | MPRKKPTSLSPGTSRFPPSPGIYNARNRFSVLEAISDEDDDSLTERDSTTSDSCGEDNSRKDPPLMKDGEIVNPLVRTLLELFSEEQISEIPLMETYIRRCGISEGMGSHLIEENNFLFGAFTSIVACPWIKKDTILLSSILLRLSEIWNQSEWVTNLLDFFEDAQFRTSVYNLLQYVHSLWTDEVASNVSEKLEGAKFIIQAEKPFGMCVCLEGAFYKLLDNISVCGALLKDLEVMEFRHLTMLIKHTIVPLVKNCPAELWPKWIDMILQPVFHYCDDTLDGSWCSFLYKETMLVPDKFCHISFTEEKIEELGKDHLFEVTREISYMLAVMALPELNGGIANEHQSIVSIVETSADLESTCSSSLVGYLLYHDDLRPSILRLINNIIGYWKDSEARIKVVSFCHMLIQLAISTHNDKLISFVQDNLIPMVVRCLIFEPISNNNDLLLLCEDAYRCIQREESVSEGQHDGNSAEIFENWLSKQMIVAHYEHSPPDELEDFVCIWEIEEEFTAYLHTYTEMLHKVDGIGDTIEDVYLRCPIPFVSKHDNNCCPISNSWAMSSMLSRKITSMYCKRETEQKFKFLCKLITFKPYIKCSGYDESVQELVDDDSEVWSALPGCCRQETLEDDKEMLREIAYLLTSREDIHCVQSFQPVSSDFSLHLQPYAQNYIEVKNASSGYDRVKEQIRLHEAFDTHLASGALDDHVRQISSSKDNFVKIMLDDDTLHSQFIDLDYDLLKLSHERRAKLLSKQDQLCLYYKHMKCAVVNLQHRDRLESLICELESEGFFRVDDDSIEWEKEHFSELVDEFNEHIFAGIHLPKYYVIRGVMDYREMLHMKDSTWDDAFTVVVGGAFCRWMEDRDLIWRTTGDENEMTVGHTTSRIIDGNGEFTAGMN
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_11g0015080 | OsLaMu_11g0015080.04 | Chr11 | 20375484 | 20381246 | + | NAM | ||
| CDS seq | atgcctcgcaagaagccaacttcgctttcgccgggaacatcccggtttcctccaagccctggaatctacaacgcacgcaacagattcagcgtactagaagccatcagcgacgaggacgacgattcgttgacggagcgagactccaccacttcagacagctgtggcgaggacaattcgcggaaagacccaccgctgatgaaggatggagagattgtgaatcccttggtgaggacattgctcgagctgttcagcgaggaacaaatttctgaaatcccactcatggaaacatatattcgcagatgtggtatcagtgaaggaatgggatctcatcttattgaagagaataactttctctttggagctttcacttctatagtggcttgtccatggattaaaaaagatacaatactgctttccagcatacttctccgtttatcagaaatatggaaccaatcagaatgggtgacaaatctattggacttttttgaagatgctcagttcaggacatctgtgtacaatcttcttcagtatgtgcattcactttggacggatgaagttgcttctaacgtatcagaaaaacttgaaggagctaaatttattatacaagctgagaagccatttggtatgtgtgtgtgtcttgagggagcattttataaacttttggacaacatttctgtttgtggtgccttactgaaggacctagaagtaatggagttccgtcatttgactatgcttattaaacatacaattgttccgttggtgaaaaattgtcctgctgaactttggccgaagtggatagatatgattttacagccagtgtttcactactgtgatgatacattagatggttcatggtgcagttttttgtacaaggaaacaatgctcgttcctgataaattctgtcatatttctttcacggaagaaaagattgaggaattaggaaaggatcatctttttgaggtgactcgtgaaatatcatatatgcttgctgtaatggcactgcctgaattaaatggtggaatagcaaatgagcatcaatctattgtcagcatagtagaaacatctgcagatttggaatctacttgttcaagctcccttgttgggtatctcttataccatgatgatcttagaccttcaatactaaggctaatcaataatattattggctattggaaagatagtgaagcaaggattaaagttgtgtcattttgtcatatgctgatccaacttgctatttctacgcacaatgataaacttatatcttttgttcaagataatttaattccaatggttgtccgatgcttaatatttgagccaatatcaaacaataatgatcttcttcttctttgtgaagatgcataccgctgcatacaaagagaggaatcagtaagtgaaggtcaacatgatggaaatagtgcagaaatatttgaaaactggttgtcaaagcaaatgatagtggctcattatgaacactcacctcctgatgaactcgaagactttgtgtgcatctgggagattgaagaagaatttactgcttatcttcacacctatactgaaatgttgcataaagtggatggaatcggtgatacaatagaggatgtttatcttaggtgtcctatcccatttgtgtccaagcatgacaataattgttgtccaatttctaattcatgggccatgtcatctatgctgtcacgtaaaataacttcaatgtattgcaagagagagactgaacaaaaattcaagtttctttgtaaacttatcacatttaaaccctacattaagtgttctggttatgatgagagtgtgcaagagcttgtggatgacgattcagaggtttggtctgcacttcctggatgttgtaggcaggagacacttgaggatgacaaggaaatgctacgtgaaatagcttacctattaacttcccgggaagatattcattgtgtgcagtccttccagcctgtctccagcgacttttcgctgcatttacaaccttatgcccagaattatattgaggtcaagaacgcaagttctgggtatgacagggtaaaagaacaaataaggttgcatgaagcatttgatacacatttggcctctggtgcattggatgatcatgttcgtcagattagttcttcaaaggataatttcgtgaagattatgcttgatgatgatactttgcatagtcagtttatagatctggattatgatctcctgaaattgtcacatgagcgacgagctaaacttcttagtaaacaagatcaattatgcttatattacaaacacatgaaatgtgctgtcgtaaatttgcaggtatgtgatctatatgtcctgcttgtccttaatgttcactaa
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| Protein seq | MPRKKPTSLSPGTSRFPPSPGIYNARNRFSVLEAISDEDDDSLTERDSTTSDSCGEDNSRKDPPLMKDGEIVNPLVRTLLELFSEEQISEIPLMETYIRRCGISEGMGSHLIEENNFLFGAFTSIVACPWIKKDTILLSSILLRLSEIWNQSEWVTNLLDFFEDAQFRTSVYNLLQYVHSLWTDEVASNVSEKLEGAKFIIQAEKPFGMCVCLEGAFYKLLDNISVCGALLKDLEVMEFRHLTMLIKHTIVPLVKNCPAELWPKWIDMILQPVFHYCDDTLDGSWCSFLYKETMLVPDKFCHISFTEEKIEELGKDHLFEVTREISYMLAVMALPELNGGIANEHQSIVSIVETSADLESTCSSSLVGYLLYHDDLRPSILRLINNIIGYWKDSEARIKVVSFCHMLIQLAISTHNDKLISFVQDNLIPMVVRCLIFEPISNNNDLLLLCEDAYRCIQREESVSEGQHDGNSAEIFENWLSKQMIVAHYEHSPPDELEDFVCIWEIEEEFTAYLHTYTEMLHKVDGIGDTIEDVYLRCPIPFVSKHDNNCCPISNSWAMSSMLSRKITSMYCKRETEQKFKFLCKLITFKPYIKCSGYDESVQELVDDDSEVWSALPGCCRQETLEDDKEMLREIAYLLTSREDIHCVQSFQPVSSDFSLHLQPYAQNYIEVKNASSGYDRVKEQIRLHEAFDTHLASGALDDHVRQISSSKDNFVKIMLDDDTLHSQFIDLDYDLLKLSHERRAKLLSKQDQLCLYYKHMKCAVVNLQVCDLYVLLVLNVH
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_11g0015080 | OsLaMu_11g0015080.02 | Chr11 | 20375484 | 20383554 | + | NAM | ||
| CDS seq | atgcctcgcaagaagccaacttcgctttcgccgggaacatcccggtttcctccaagccctggaatctacaacgcacgcaacagattcagcgtactagaagccatcagcgacgaggacgacgattcgttgacggagcgagactccaccacttcagacagctgtggcgaggacaattcgcggaaagacccaccgctgatgaaggatggagagattgtgaatcccttggtgaggacattgctcgagctgttcagcgaggaacaaatttctgaaatcccactcatggaaacatatattcgcagatgtggtatcagtgaaggaatgggatctcatcttattgaagagaataactttctctttggagctttcacttctatagtggcttgtccatggattaaaaaagatacaatactgctttccagcatacttctccgtttatcagaaatatggaaccaatcagaatgggtgacaaatctattggacttttttgaagatgctcagttcaggacatctgtgtacaatcttcttcagtatgtgcattcactttggacggatgaagttgcttctaacgtatcagaaaaacttgaaggagctaaatttattatacaagctgagaagccatttggtatgtgtgtgtgtcttgagggagcattttataaacttttggacaacatttctgtttgtggtgccttactgaaggacctagaagtaatggagttccgtcatttgactatgcttattaaacatacaattgttccgttggtgaaaaattgtcctgctgaactttggccgaagtggatagatatgattttacagccagtgtttcactactgtgatgatacattagatggttcatggtgcagttttttgtacaaggaaacaatgctcgttcctgataaattctgtcatatttctttcacggaagaaaagattgaggaattaggaaaggatcatctttttgaggtgactcgtgaaatatcatatatgcttgctgtaatggcactgcctgaattaaatggtggaatagcaaatgagcatcaatctattgtcagcatagtagaaacatctgcagatttggaatctacttgttcaagctcccttgttgggtatctcttataccatgatgatcttagaccttcaatactaaggctaatcaataatattattggctattggaaagatagtgaagcaaggattaaagttgtgtcattttgtcatatgctgatccaacttgctatttctacgcacaatgataaacttatatcttttgttcaagataatttaattccaatggttgtccgatgcttaatatttgagccaatatcaaacaataatgatcttcttcttctttgtgaagatgcataccgctgcatacaaagagaggaatcagtaagtgaaggtcaacatgatggaaatagtgcagaaatatttgaaaactggttgtcaaagcaaatgatagtggctcattatgaacactcacctcctgatgaactcgaagactttgtgtgcatctgggagattgaagaagaatttactgcttatcttcacacctatactgaaatgttgcataaagtggatggaatcggtgatacaatagaggatgtttatcttaggtgtcctatcccatttgtgtccaagcatgacaataattgttgtccaatttctaattcatgggccatgtcatctatgctgtcacgtaaaataacttcaatgtattgcaagagagagactgaacaaaaattcaagtttctttgtaaacttatcacatttaaaccctacattaagtgttctggttatgatgagagtgtgcaagagcttgtggatgacgattcagaggtttggtctgcacttcctggatgttgtaggcaggagacacttgaggatgacaaggaaatgctacgtgaaatagcttacctattaacttcccgggaagatattcattgtgtgcagtccttccagcctgtctccagcgacttttcgctgcatttacaaccttatgcccagaattatattgaggtcaagaacgcaagttctgggtatgacagggtaaaagaacaaataaggttgcatgaagcatttgatacacatttggcctctggtgcattggatgatcatgttcgtcagattagttcttcaaaggataatttcgtgaagattatgcttgatgatgatactttgcatagtcagtttatagatctggattatgatctcctgaaattgtcacatgagcgacgagctaaacttcttagtaaacaagatcaattatgcttatattacaaacacatgaaatgtgctgtcgtaaatttgcagcatagagatagacttgaaagtttgatatgtgagctcgagtcagaaggtttcttccgtgtggatgatgattctattgaatgggaaaaggaacacttttcagaacttgtggacgaattcaatgagcatatttttgctgggattcaccttccaaaatattatgttattcgtggagttatggattatcgggaaatgttacatatgaaggatagcacttgggatgatgctttcacagtggttgttggtggagcattctgtagatggatggaagatcgtgatctgttttggatggagacaagatactataggcatcgttactatgacatcattcaagagccagtaaaaatgatatggaggactacaggtgatgagaatgagatgacagttggacacactacaaggattatagatggcaacggagaattcaccgccggaatgaactag
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| Protein seq | MPRKKPTSLSPGTSRFPPSPGIYNARNRFSVLEAISDEDDDSLTERDSTTSDSCGEDNSRKDPPLMKDGEIVNPLVRTLLELFSEEQISEIPLMETYIRRCGISEGMGSHLIEENNFLFGAFTSIVACPWIKKDTILLSSILLRLSEIWNQSEWVTNLLDFFEDAQFRTSVYNLLQYVHSLWTDEVASNVSEKLEGAKFIIQAEKPFGMCVCLEGAFYKLLDNISVCGALLKDLEVMEFRHLTMLIKHTIVPLVKNCPAELWPKWIDMILQPVFHYCDDTLDGSWCSFLYKETMLVPDKFCHISFTEEKIEELGKDHLFEVTREISYMLAVMALPELNGGIANEHQSIVSIVETSADLESTCSSSLVGYLLYHDDLRPSILRLINNIIGYWKDSEARIKVVSFCHMLIQLAISTHNDKLISFVQDNLIPMVVRCLIFEPISNNNDLLLLCEDAYRCIQREESVSEGQHDGNSAEIFENWLSKQMIVAHYEHSPPDELEDFVCIWEIEEEFTAYLHTYTEMLHKVDGIGDTIEDVYLRCPIPFVSKHDNNCCPISNSWAMSSMLSRKITSMYCKRETEQKFKFLCKLITFKPYIKCSGYDESVQELVDDDSEVWSALPGCCRQETLEDDKEMLREIAYLLTSREDIHCVQSFQPVSSDFSLHLQPYAQNYIEVKNASSGYDRVKEQIRLHEAFDTHLASGALDDHVRQISSSKDNFVKIMLDDDTLHSQFIDLDYDLLKLSHERRAKLLSKQDQLCLYYKHMKCAVVNLQHRDRLESLICELESEGFFRVDDDSIEWEKEHFSELVDEFNEHIFAGIHLPKYYVIRGVMDYREMLHMKDSTWDDAFTVVVGGAFCRWMEDRDLFWMETRYYRHRYYDIIQEPVKMIWRTTGDENEMTVGHTTRIIDGNGEFTAGMN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr11 | 20382979 | 20383214 | + | OsLaMu_11g0015080.01 | OsLaMu_11g0015080.03,OsLaMu_11g0015080.02,OsLaMu_11g0015080.01 | All |
| SE | Chr11 | 20379354 | 20379609 | + | OsLaMu_11g0015080.04,OsLaMu_11g0015080.01,OsLaMu_11g0015080.02 | OsLaMu_11g0015080.03,OsLaMu_11g0015080.04,OsLaMu_11g0015080.02,OsLaMu_11g0015080.01 | All |
| SE | Chr11 | 20381804 | 20382041 | + | OsLaMu_11g0015080.01,OsLaMu_11g0015080.02 | OsLaMu_11g0015080.03,OsLaMu_11g0015080.02,OsLaMu_11g0015080.01 | All |
| SE | Chr11 | 20382085 | 20382927 | + | OsLaMu_11g0015080.02 | OsLaMu_11g0015080.02,OsLaMu_11g0015080.01 | All |
| SE | Chr11 | 20382085 | 20382927 | + | OsLaMu_11g0015080.03 | OsLaMu_11g0015080.03,OsLaMu_11g0015080.01 | All |
| A5 | Chr11 | 20382222 | 20382927 | + | OsLaMu_11g0015080.02 | OsLaMu_11g0015080.03,OsLaMu_11g0015080.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0513900 | RBH | 0.0 | 0.0 | 11.048792 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g31470 | RBH | 0.0 | 0.0 | 3.118309 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0513900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0015190 | RBH | 0.0 | 0.0 | 4.434410 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0015130 | SBH | 0.0 | 0.0 | 5.416603 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0015090 | RBH | 0.0 | 0.0 | 20.219921 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0014900 | SBH | 1.078193 | 0.742818 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0015210 | RBH | 0.0 | 0.0 | 2.673443 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0290700 | RBH | 0.2549075 | 0.8485465 | 19.3007695 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0015410 | RBH | 0.000000 | 0.0 | 0.488814 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0302200 | RBH | 0.0145545 | 0.8422925 | 5.815473 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0015490 | SBH | 0.025784 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0015310 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0015130 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0014770 | RBH | 0.0 | 0.0 | 0.435977 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0015050 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G014910 | RBH | 0.0 | 0.0 | 0.253244 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0015230 | RBH | 0.0 | 0.0 | 1.129752 |
