Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsLaMu_09g0009510 OGI:09041760 | 16/16 LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) Chr09:14700400-14701964
Gene Symbol OsMyb10
DNA seq

atcttgctaaattaaagcctaaagcctttccatagtattaacccaaatcgagcaaattttttctcatcttggtagctttgattcttcgtcttctttgcggcgatcgattgatcttgaggagcttaatatatcgattgagatagcaaatggggaggcagccgtgctgcgacaaggttgggctgaagaagggtccatggacggcggaggaggaccagaagctcgtcagcttcctcctcggcaacggccaatgctgctggcgtgccgtccccaagctcgccggtgagtcacccacctcgccagagtttcagtctctctctttaatttggtcgatccattgatcaatggactgatgtatctgtgtaactgaaacagggttgctccggtgtgggaagagctgccggctccggtggacgaactacctccggccggacctgaagcgtggtctcctgtcggagacggaggagaagacggtgatcgacctgcacgagcagctcggcaacaggtttgatcctcgacgagctgagctcgcgacatggtggcgagagatgagactagagtgctaaataatatatgtgcaggtggtccaagatcgcgtcgcacctgccgggcaggacggacaacgagatcaagaaccactggaacacgcacatcaagaagaagctccggaagatggggatcgaccccgtcacacacaagcccctctaccctgctccgccgctggccgacggcggctcgccggagcagaaggtgccggaggaggaggaggaggtggaggagaagtcgtctgctgccgtggaaagctcgacgagcaccggcgccggccacgacgtgttctgcaccgacgaggtgcccatgctgcacctggacgacatcgtcctcccgccgccgtgcgacgtcgtcggcgacaccgccggctcgccggcagagtcgtcgtccacgtcgacgtcgtcgagcggcggcggcggcatcgacgaggagtgGCTgctgccgatcatggagtggccggagtcgatgtacctgatggggctcgacgacgtcgacatggtcaccacggcggcgccggcgatggcgacgtcgtgggagttcgaggatccgttcaacgcgtaccagaggatcgcgttgtttgatcaccaccacgagctgacgtgggcttgacgtaaccacttctgaattttctcttgtttcatactccctcggtctcataatataagagatttattgtaccgggatccattatattatgagatggagggagtacaaatttcatctcggcgctagctgcacttagtgatttattaccattggattattagtgccctaattaaacaattagagataggattaagaacatatataagatgatAaaaaaaaaaggtgaagtggttgtgtgagagagagagacaaatgcatgagctagccctctttaatttcgtctttctgtcaTttttttttctgctcatcatttttttttcaggcttcttttagatacatgtgtttggcatacatacatgtaaatgaaaggaatttgaataatgaaaatgagagtgaatggtgtcatcgacttt

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CDS seq

atggggaggcagccgtgctgcgacaaggttgggctgaagaagggtccatggacggcggaggaggaccagaagctcgtcagcttcctcctcggcaacggccaatgctgctggcgtgccgtccccaagctcgccgggttgctccggtgtgggaagagctgccggctccggtggacgaactacctccggccggacctgaagcgtggtctcctgtcggagacggaggagaagacggtgatcgacctgcacgagcagctcggcaacaggtggtccaagatcgcgtcgcacctgccgggcaggacggacaacgagatcaagaaccactggaacacgcacatcaagaagaagctccggaagatggggatcgaccccgtcacacacaagcccctctaccctgctccgccgctggccgacggcggctcgccggagcagaaggtgccggaggaggaggaggaggtggaggagaagtcgtctgctgccgtggaaagctcgacgagcaccggcgccggccacgacgtgttctgcaccgacgaggtgcccatgctgcacctggacgacatcgtcctcccgccgccgtgcgacgtcgtcggcgacaccgccggctcgccggcagagtcgtcgtccacgtcgacgtcgtcgagcggcggcggcggcatcgacgaggagtgGCTgctgccgatcatggagtggccggagtcgatgtacctgatggggctcgacgacgtcgacatggtcaccacggcggcgccggcgatggcgacgtcgtgggagttcgaggatccgttcaacgcgtaccagaggatcgcgttgtttgatcaccaccacgagctgacgtgggct

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Protein seq

MGRQPCCDKVGLKKGPWTAEEDQKLVSFLLGNGQCCWRAVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSETEEKTVIDLHEQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMGIDPVTHKPLYPAPPLADGGSPEQKVPEEEEEVEEKSSAAVESSTSTGAGHDVFCTDEVPMLHLDDIVLPPPCDVVGDTAGSPAESSSTSTSSSGGGGIDEEWLLPIMEWPESMYLMGLDDVDMVTTAAPAMATSWEFEDPFNAYQRIALFDHHHELTWA

Function Transcription factor MYB20 [UniProtKB/Swiss-Prot:Q9C7U7]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsLaMu_09g0009510 OsLaMu_09g0009510.01 Chr09 14700400 14701964 + NAM
CDS seq

atggggaggcagccgtgctgcgacaaggttgggctgaagaagggtccatggacggcggaggaggaccagaagctcgtcagcttcctcctcggcaacggccaatgctgctggcgtgccgtccccaagctcgccgggttgctccggtgtgggaagagctgccggctccggtggacgaactacctccggccggacctgaagcgtggtctcctgtcggagacggaggagaagacggtgatcgacctgcacgagcagctcggcaacaggtggtccaagatcgcgtcgcacctgccgggcaggacggacaacgagatcaagaaccactggaacacgcacatcaagaagaagctccggaagatggggatcgaccccgtcacacacaagcccctctaccctgctccgccgctggccgacggcggctcgccggagcagaaggtgccggaggaggaggaggaggtggaggagaagtcgtctgctgccgtggaaagctcgacgagcaccggcgccggccacgacgtgttctgcaccgacgaggtgcccatgctgcacctggacgacatcgtcctcccgccgccgtgcgacgtcgtcggcgacaccgccggctcgccggcagagtcgtcgtccacgtcgacgtcgtcgagcggcggcggcggcatcgacgaggagtgGCTgctgccgatcatggagtggccggagtcgatgtacctgatggggctcgacgacgtcgacatggtcaccacggcggcgccggcgatggcgacgtcgtgggagttcgaggatccgttcaacgcgtaccagaggatcgcgttgtttgatcaccaccacgagctgacgtgggct

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Protein seq

MGRQPCCDKVGLKKGPWTAEEDQKLVSFLLGNGQCCWRAVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSETEEKTVIDLHEQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMGIDPVTHKPLYPAPPLADGGSPEQKVPEEEEEVEEKSSAAVESSTSTGAGHDVFCTDEVPMLHLDDIVLPPPCDVVGDTAGSPAESSSTSTSSSGGGGIDEEWLLPIMEWPESMYLMGLDDVDMVTTAAPAMATSWEFEDPFNAYQRIALFDHHHELTWA

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.000000 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_09g0401000 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os09g23620 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os09g0401000 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_09g0009650 RBH 0.0 0.000000 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_09g0009600 RBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_09g0009860 RBH 0.0 0.0 2.820115
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_09g0009620 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_09g0009800 RBH 0.0 0.0 0.000000
Minghui 63 | MH63RS3 | HZAU OsMH63_09G0239900 RBH 0.888697 49.476286 0.176529
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_09g0009760 RBH 0.0 0.119463 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_09G0225800 RBH 1.8088795 65.6115725 0.068206
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_09g0009760 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_09g0009520 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_09g0009670 RBH 0.0 0.000000 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_09g0009480 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_08g0016310 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_09G010010 RBH 0.0 1.791396 1.817487
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_09g0009820 RBH 0.0 0.000000 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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