Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_08g0004670 | OGI:08000190 | 16/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr08:4229697-4230473 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ttatcttaattttggcctgaagtggttcgccaattgctttgagatagagacatgtattgagttgccctgcccaaaaaaatagtatttacataatagaacaatatataaatcacatgttttacaacaatcatacctctgcatctagtacaatcatctgtataccatagaactcatcaaccattgtaggattaaccgcatcccatagcctataacttttactttgattctcccctatcgttctttggtgttaatgcagtaatcaaattgctaggtgccatgttatctgcaaatgagtagtactgcatatagttactaaacaaatttgacagagagtcgtatacatgtttatgttattttatagaactaattaatacaaactctcataattgtgttctttgataggtgcaaggttacttttttgtgctggaaaaaaaattgacaaaattgtatacatagatgcaacataatgtacctctaactaatacaggatatcgtaattgtgttcttttgtaggtgcaatgttagtttctttctgctgaaaatatgatgacaaaactgtatagatgcataTGttatttcctagctgcaagatcatgattagatgatgtcatgattgtattcttttgtgggtgcgtgatataccttcttatgccaaagatgattcgcaaggtgccgcagacttcttctgctccgtccgccggaatcgacttcttctgctccgtccgccggaatcgacttcttctgctCcgtcgtcggaatcgacttcttccggaatcg
More
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| CDS seq | atggcacctagcaatttgattactgcattaacaccaaagaacgataggggagaatcaaagctatgggatgcggttaatcctacaatggttgatgagttctatggtatacagatgattgtactagatgcagagggcaactcaatacatgtctctatctcaaagcaattggcgaaccacttcaggccaaaattaagataa |
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| Protein seq | MAPSNLITALTPKNDRGESKLWDAVNPTMVDEFYGIQMIVLDAEGNSIHVSISKQLANHFRPKLR |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_08g0004670 | OsLaMu_08g0004670.01 | Chr08 | 4229697 | 4230473 | - | NAM | ||
| CDS seq | atggcacctagcaatttgattactgcattaacaccaaagaacgataggggagaatcaaagctatgggatgcggttaatcctacaatggttgatgagttctatggtatacagatgattgtactagatgcagagggcaactcaatacatgtctctatctcaaagcaattggcgaaccacttcaggccaaaattaagataa |
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| Protein seq | MAPSNLITALTPKNDRGESKLWDAVNPTMVDEFYGIQMIVLDAEGNSIHVSISKQLANHFRPKLR |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g02080 | SBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0001500 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0001510 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0024020 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0001980 | SBH | 0.025109 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0024080 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0003300 | SBH | 0 | 0.0111955 | 0.0050185 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0023800 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0283100 | SBH | 0 | 0 | 0.0091395 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0000370 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0018150 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0013290 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0018510 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0022910 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G004590 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0004540 | RBH | 0.0 | 0.0 | 0.000000 |
