Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_07g0025500 | OGI:07060020 | 16/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr07:27772940-27773381 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atgcacgaagacagtacttcgttgttcgatttactgggctggacaaacaatgctgatgcagacgtcagattatgcgccgcAaaggtcactgccgatcTtgctggtagtgtccgagttgttcaaatccctgaggcaatgcagctcatagcctcacttctggacattgatcaacaaccaaaaaaaagcaatcattttcttttcattgagagccaagagggaagagaagactcaccagtttcgcaagttggcagggtaaacataaatctgtgatacttaagtacttgaaaagatggcatatacttttgattccgggatgaggcatctaacattctgaacaaaacccccatattctcagatgcttgaggtggatcacaagatgctggtcaattccagaggaggtgctgtccacggaccagattccctcccgtgcctggattgctaa
More
|
||||||||||
| CDS seq | atgcacgaagacagtacttcgttgttcgatttactgggctggacaaacaatgctgatgcagacgtcagattatgcgccgcAaaggtcactgccgatcTtgctggtagtgtccgagttgttcaaatccctgaggcaatgcagctcatagcctcacttctggacattgatcaacaaccaaaaaaaagcaatcattttcttttcattgagagccaagagggaagagaagactcaccagtttcgcaagttggcaggatgcttgaggtggatcacaagatgctggtcaattccagaggaggtgctgtccacggaccagattccctcccgtgcctggattgctaa |
||||||||||
| Protein seq | MHEDSTSLFDLLGWTNNADADVRLCAAKVTADLAGSVRVVQIPEAMQLIASLLDIDQQPKKSNHFLFIESQEGREDSPVSQVGRMLEVDHKMLVNSRGGAVHGPDSLPCLDC |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_07g0025500 | OsLaMu_07g0025500.01 | Chr07 | 27772940 | 27773381 | + | NAM | ||
| CDS seq | atgcacgaagacagtacttcgttgttcgatttactgggctggacaaacaatgctgatgcagacgtcagattatgcgccgcAaaggtcactgccgatcTtgctggtagtgtccgagttgttcaaatccctgaggcaatgcagctcatagcctcacttctggacattgatcaacaaccaaaaaaaagcaatcattttcttttcattgagagccaagagggaagagaagactcaccagtttcgcaagttggcaggatgcttgaggtggatcacaagatgctggtcaattccagaggaggtgctgtccacggaccagattccctcccgtgcctggattgctaa
More
|
|||||||
| Protein seq | MHEDSTSLFDLLGWTNNADADVRLCAAKVTADLAGSVRVVQIPEAMQLIASLLDIDQQPKKSNHFLFIESQEGREDSPVSQVGRMLEVDHKMLVNSRGGAVHGPDSLPCLDC |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0649300 | SBH | 0.000000 | 0.597205 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g45490 | SBH | 0.000000 | 0.405833 | 0.037420 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0649300 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0025670 | SBH | 0.000000 | 4.986097 | 0.110220 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0025710 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0025560 | SBH | 0.049186 | 0.537736 | 0.329784 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0025540 | SBH | 0.0 | 0.018999 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0025790 | SBH | 0.316716 | 1.396034 | 1.156038 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0447000 | SBH | 0.715319 | 0.8503115 | 1.0058345 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0026230 | SBH | 0.077395 | 0.079161 | 0.137687 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0459300 | SBH | 0.5446965 | 0.8183535 | 4.637165 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0025560 | SBH | 0.016746 | 0.049124 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0025740 | SBH | 0.0 | 2.229766 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0025600 | RBH | 1.064112 | 2.735365 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0039970 | SBH | 0.074520 | 0.0 | 0.043507 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0025550 | SBH | 0.000000 | 0.736243 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G025410 | SBH | 0.0 | 0.000000 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0025490 | SBH | 0.000000 | 0.000000 | 0.843773 |
