Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_07g0025060 | OGI:07074680 | 16/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr07:27464926-27476849 | ||||||||
| Gene Symbol | qHMS7 ORF3, qHMS7 ORF1 | ||||||||||
| DNA seq | atgtcccacatcttgtcacgccctttcgatctcctgggtgcgcacatatgcgaattctccgcccaattccgcatcttccccgatgctctaacgccgccacctgatctcctgccccgatgcaccgcctcatctcttctccctctctcatggcatctgcagcggctagctggtggtcaccattgcttgctcgaggaggacctgtccgtcgtgtttccggtgtgttttcttgtcactcgacgatttcaatcctgactgatggtaccatcttatttattttagatgttgactaggtaggtgtctgtgcgttacaacgggtaaaaaatatacaccaatttaaaatcacaaagtaaaatgatgttgaataattaaatttgttaggatgaaaaccttattattgcacgaacaataatttcatcacatccttataagttttcacaggttagtaatacaaacagccaaaaaattcaagaatagaatggcacaataggtctcttagggcacgttcaacggttgagcccgccatggactcttgaataggctatgtcagagaaaaacaatagttctataaagggaaagcgtctctccactaatatgcagtaattAaatttttgtagcaatggtgccgtaattttctgcattttggatctaaatacgtgacttttcttgaagatggactatacaacggccattggttatctcgtctgctcgtgtttatctcattgtgagccgatgtcaggccgattgcatgcaaaacatcgatgcatctccattcttttttctctctcttccacatcatcaaacctgcttccatggcaataaagagagcccactaattaatacctttgtacatgccctagtacctcctggccctcttccatagatcctgcacgcacaaataaatgaagaataactgtgcagtaatgcaggaagtaaattaagctgaatcaagttgtatagatgagataggtttatttaaaccatcaagattaatatttgtagcatcatggttgcatgatcttccaaattcaacctgtagcttcgatcgaaaccaaacctgtacaaatggtcttcccagttaaagaaatttcaggctgtgctacttatttcaaactgaaaatttccaacctttgaaaaatatactaatttaaatgagacaaccgatttaagtggttcatagctagaaacaccataccttgatttttcctaataattatgtaatagactaatagttaacagattgagccacaaaactctattgtaataaattgctagattccccaaatttaatcactaagtgcattagttacttgtaacggactcaatttcaggggaaaaatttttgcgaaatattttagttgcactcttctcaattcttcttttgaagtgatcttgccttctcttaatttcttttaacttggatttagactttatttgcaaagttaatcgcgctcttttaaattttgcaaaacatttctattattttctttaatctctaactttggctctagattatttttcctttgaatccattcccgaacatctccaacaaatactatttcaattcccactcaaccatctctagagtacaggaaatgttgatacctttcctttggacccccaaatatttcccctttgaaatcacgttcatctaaattatccattcaagattttaaagtctactatttagcttgggccaataattcccgattgaccggactctttgttatattccattaaccattttatccttgggactaaaccagtataatttcctttttgctggaatttattctagatcaaacccttgatctagacctatctttagaaatccttgttctctttcatacaacaccttccacaaactcctctagatgttccacttcttctatctataaattaaaccgccagtttgattcccaaggtttgattctttctagcacaagaataatatttctagaataattgttcttgtgctaataaaccttttcaatccctcctattcaaaaggtccaaatctcctttaaaacctatttaaaaccctcccgtcaaaattcccttagttttcaattccttaaattctatttaaatttcttgtccAaaattcaaaaggttcacaaatatcttcctttataatttttcccctttgaattctagtcaaattcaaaaagtccacaaacatttcttcctatagatttcatctcctttgaattccattcaaaatcctctacacaaaaattccaaaggtttctattcaaatcgggctgAaattcctttttcttctcccctcagcccatctccctcctcagcccaagcgacccagccccagctgagccgcctccttcctcttccctgtgggcctgccgccgccgccgtctgcaaccacagcgtcgtcgccgtctcgccccttccagatgtgccgccgccgacgccgtgctcctcttctccacgccaccgtcaccgtggccaagtcgccgactgccttcgcaaccgtcattcgccaccgcctctcaccgcctatataagaagacgaaccccctccattttccacacatcaatcgagctcttcgagctctgcctctctctctcctgccatgtccggctgccacctaccgtcggccgatctccctcaccggaattccactaattaaatccttgcgccatcgggtttgcctcgacgaggtgaactcattttcctagtttccccttcctttacccttccgaaaccaaccaccacagccacctcctcttgttgccagagctatactcttgcctgcgccgttccggccatctccttcactccctttgccaaccaccgacttccccggatgcgcatcgttcgggaacaccatcctctaccggcgcagtcatatcttagccaccacagcatcggcgcccttcctctcctcctctcggttccctggctaacagagaggaagaaaacgaagcaaggagagaagaacaggaggaagaagaagagacatatgacatgcgggccccacttctataaagtaaatctttttcctttaatttccatttcaatcttcaagcacccatgtctctccaaccacagatccaatcccagtgagaccttgacctaaattcttctaatttcaaactcttttgttttgatatcaaattcctattttaaaattttatttaaatttctttatttgaatacctttttaatttaaacctatttgatttatcttaaatacctttaattttaaatttcttattttatttaaaaaccttttccttatttatttatttatttatttatttactttctaattttaaattattttaattaacctttaaaaattattttacatccctttaattttaaatttcttgttttatttaaaaacctttttaaattttaattatcctttagtttctttaaatacccttttctttaccattttaaattttatttatttaatctatttaaaacccctttttaatttaaattcctttgatttatttaaatacccTttttatttctaaatcattcccataccatcccttagccactaaaaatccgccgatagaactttacgccttccatggagacgttcgtgtggtctcaaaccccgatgtcaaaccgttggtcgtaaatcccggcataacctaatcctaaggtcgaagtgttgctcttcgcaccctacgcctcaacgcgtacagtggtgagagcctcactactccctcgacctctacagcatgccacacactagctttcggattctgtgcgatccaagccgctctgctgccactcacggctgtagggtaacactttccacccacaaacctacataaaccctcccaactctctagtcgttgtgccacttgattgtagcatcgactagatgggccgatatttagccgttatgtcttaacatcggctaaccactccaaatatctagccgttgtgctgcgttactctaggaccgactagaaaaccaaatccaccaaataaaccctacctatccattctatcctttctttgtttttatttgattcccaacctatagaaaccAaaaacctctcttttgttttcaaattaaaatttattttgaactcattcctttttcctctcgcctcgctccaattttatttattccttggctttatcatttctttgtagcaatttgcttataggctttatttgttatcttttcgtattcgtacattagaccgtacagtaagttttatcagcatccaaggagctgatgtggacccagatggctacgctgaagccgcgggaaatcttaaggcgcaaggcaagacataactaaaattttgatcatatagaaaccttgatataatcttcatatttaaatttgatgcatgatatttactcTtttaacatctcataggtagatgttatacttcagaataacattgtgttattctggtaattattaatgctttctgcattgttacatgaggttattgaaagatgcattggacatcattgtatgtggtttattattcaaatatctttacaaacttaggaatccggttaaaatgggcatttatgaattgagtttgtgaatattgtgattatgaatgttgttgaatgatgaagacggtgtggggagtttggaaagttttgggtggtttaaccggattataattacccccttataccatggaaatgacatagttgcgtccatccacacgatcaagtaattggacttagccaagtacattgtcccactacatgaaagactgttgggtagctctatgagcagttttggggtgaacttgcgtaccttgcctaggcctggcaagagttcgaccactatgatgaaccaagaccccactgtgcagtaactagtagtaagtgggaccttcgaacagctctggtgtcctcagccttgcaaactgttgacatcgggtgggtaaagctggacagtctttgtagaggtgaattaaatcattcgaatgtaccgtgctcccggttctggagttgtgtcatcagggtgattcctactcctgaagtataAGtagttttaaaaattAaaatgttgaagataaagatgatttatggttttattattcctttactttattattgttttatttattcatatctcttcacctttaattgtttatAatatgtcttgctgagtacataagtactcactcttgcataatttaacatatagaggatcgtgctaaccagaagaccagaggatagcgaaatctacagcaacgatgagtttatctaggctagtctacactcgagcttttgcctgtggattttctttggagtttattaattgtagttttagtagttgaagaatttaggagtttagtagtctagaactttggattttcttgtacttcaaatatggatatattagtttggatcttttcaccctttaacagttgtataattagcttgtatgaacaaatttgtataattactcgaaagttgttctgtatatcaatctgtgcgtgatcgaaatcctcgacgatcacgagtggatttcggggcaccaagcctaaattggatgtcccgacattactgaagatggcaaaggacccgcctttcttagagaggaaataatggatctagaaagaaaaggctagcagcctgagccaacggtatcatcatacagtagaaaaaacatgaagagcaaactgactgctacactatcaaagcactaccacatctgcaaattcagatgaagagtttagattatcaaaaattgtgaagactactctttatctggcaaaaaacacagcatatttatggtatgttgcagttcctaacagaccatcaatcagtacaatctcaattttgcctaaatcttaatgtcgtcttttatggactttttactgcacgtacagatttaaatcaagtgagattcaatgtcaataaccatgattccaggcatcatttttacagcttcgtacatcgacagagtgcaccaattcatgagcaccgcgttcaaaggaattaagtggcaaatcataggcatgtagtggattgaaggaaaaaaatgactctaaatggtgcatgatacatattcatatatttatcaattgatgtatactttaatgatagattttcttgggaacctcggaacatgaccaccatcagtcaagtaaaaggggacgagtctagtaaaccatacaggcggcttccatcctaggagaagaagcatactgcgatcactcaaggtttgaaaaccattgacaccagggccacaattgtatcggccgtattggcaatcggctccatcaacctcgatcaactcacacttcgttttcagccgatacaacatccaaccgatgcgtggtccgactccaaatcctactcgattcaacaccaaatccacttcgattttctcccttctttcgttgttaacgttgttaacgcttagatgtcagctgcacacacaaaataatAaaaaatgatatgtcagctgcacacacaaaataataaaaaatgatgaggcccatgcggccccaatgtcatcctcactactccccttctctctccttgcaagaagacgggcacagcggcgggacggagcgggcggccggagagggccagcggagcggggagggtggcagtgcccgctctactcccctctctcttcccttttcggcatgtgggtggtggagggcgcagaacggtgaggtggagcggcgacggctagagtaggtcggcggagtggagcgggacgaacgacggccgacggcaggcggggtgaagcgctggcagacgccggagagatgggcgcggcggggccaacgggcggaggaagttcaacgagctgtgggccttccccttctctccacaagctaccgctgtcggtggtgaacccttgttcgcagtaaggaggaagaagaagggatcaggtctccgcgcgcggcgccgctttgtagcggagtcagcctccactgcgcgccgcacgaccgccatcgtcacgggcgtcgtcttctcgctgtcctcctcatcgtcgtccccttcgacgccgtcctcccagttggcatcgcgggcccgatctggcgaggtggtggtgggaggcctaggcgagggggtggaagcaaatgtggccggggaggtcgaggaaggcacagaaagagtcgccggggagtgtgtagtgggcgtagaaggcgaggaggtggtaggtgatgaagccaatgagtgcgtgggaggcggcgttggaggactccggaggctacaaagaggagcaggacgaggatgcggtcggtcatggcagcgggcaacgacaatccaccaactccactccatccccgccaacatccagatctgccggcccgagctcccggcgtcgggatcctctttggcgtccgttgcggcgcgctcactaccgcctgcatgtacctcgtgtggtatgtcctcaccggcgccgacgccgcgccctccccctacggcgttgaggacgaggaggcgccgtctccgcctcgtccctctatgcgcgcgcttgccggtggagagaggagacaaaggtagaggatgtgggtcccactattttatcttcttgattgacttatgggccaaTtttttaatttttaattttgcccTtttttgttggatcaaactgcaacgttagcgcaacgtcaataccacgtaggataaatatctagtcaaaggagccacatagacgcgtcgtaatccgaaaccaagcaacaatactgccgagggatcttgtttgcactgttttgtaagttgggggatgcgttgtatccggttttgcggttcagggatgaatttcggactcggagataaattgagggacatatcatgaacttattcctttagctgaccaagtccaaccaggggcaattatgtccatccacatgatgcaggtgaggcaaaaatatccttaccgaaacccgtcttctgatgatgacagaattccccacgcaacacacaccacggctattccccctccctacccccgccgcctccccgtccgccgccgcgatgcgaattctccgccccattccgcgtcttccccgacgctctaacgccgccacctctcctgccccgatgcaccggctgatctcttctccctctttcatggcatctgcagcggctagctggtggtcaccattgcttgctcgtggaggacccgtccgtcgtgtttcccggtgtgttttcttgtgctgatgctaaagtctgcacctttacttggttattactacagttttggcatgattttcgtaggcagattccttgttctaatgctaaagtttgcgtcttttgccacagtttttggatctgcgatcaactttgggttttgttttcatttgttcgaaggtagatgcggaaaataagtttctttaaactaattcgaaacaaagacaaaggagatcgagaaaaaaaatttagaaatcgttatctcaggcttaggttAaaaaaaaatagaaatcgattatcgatttcagggttagataatgtcacttcacgatttcaatcctgactgatggtaccatcttaTttattttagatgttgatattgggtctctcattctctttaatgatagatttccttgggaacctcggaacatcaccaccatcagtcgagtaaaaggcgacgagtcatacaggcggcttccatcccaggaaaagaatcatactgcgatcactcaaggtatgaaaaccattgacaccaggggcacaatcttggaggttagagctggagatgagaaaagtaataaagatgcggcgtcctcagaggttttatatgtcaaatatgatatactggggcaaagtgcgaagcatgatggctgtgatgcggaggaccgaaggagtgaaacagaggaacaTGtggggggaatagttgtcagtgaggaggatgaagttcttgatcctgaagaatatactgtgaacaatatacttccaaaaagtagacaccgtgatggctctatatatatggacatcatggacacaccgtggaaaaaggagtttcatattgcagaccgtaatgagagtaagctatcttttctctatctttatttgctatagtattttttattagagataatttgtttccttgaacatagcgaatctttttccatatctataaataatttattgtgatcctagagatcattgtatatgtggtgctatgcagcactgccagaattttacccgccttacactcttttcagctatgagataattgtactggaggtccttaaacgtggaggagagtaacacttccaccccaagccttgtactttacttttactggcccttcagcttagcaccatttgcatacatagcaatctgcgccacagcctgatgggagggactgaggttgcatgtagagttctgatgacatggattaggaccttattccatgccatttaattacataaatgtccaaagtactttatccctgaactttgcaacacggtgatcacacagcctttgagcatgtatttcaatggcagaatacacaagAaaatgacaactataagtgcaaataataatctaaatatgacatctacactgttgtaattgccattaggttcaaattctccatacatgcagccacaaactgtcagtaatacaacttttccaagcatgcaaggagcaacaacaagcaataacagaaagtactcaggcagttcacatactatatacccctgtttaacatgaggagtgggttgccagtttccaaaatgtagaccacttcccaaaacatgtacttagctagcaaaattgtacttggttttctgtagaggtaaaaggctggtacaggaaagaatatacctggttttctatagaggtagtctgcccttgagtttttttttttcttgtagttgatactaggacagatgttgctctcctagtaaaaagaacataggttgtttctactttgtagatgaaaaggaaaaaaattccaataaggccatataatcgtcaaatatcacatgtacttttcaaatgtcaagtgtttgttcactgtattaatttccagttacaaacttacattatgactttactttttttgaagctcagttggaggcaatgaagttttcgaatcccacaaattgtgtcattcgcagaaatggaacttgcatgtcacattatcatcgctgcatgctgcaaattttatcattggagttggctaaaattacactggatggtggttcagtagagttgtatggatacatagctgtgcgggatgatctggatccgttgcttaattatatcgtcaattgtagcagggatgatccaatcattgtggagcaggtacacatccatatttatctagaaatattccatgtataagtctatctgaaaccctttaatattgaggtttgcccacttagctccctcaagtatagaatcaccttggggctgttttggtggtggtttcacccacatggcttgttatattgactctgccatttgggcaaaccagcaccgaagccacaccaagagaatcatttaggtggtagatctaaatgttatggaaaaaaaattggtttgggggggggggggggttatgaaccttggtacttgatggggtttagtggtcttatttcttattatttcgaattaaattactcatttcataatgtaaggcatactaaaactgctattctcttttacatcattaaggttggggtagattgtgaatgttttatcaacctcttgaattatttagtatatatacaaaaaaaaataagtttgctctcttgatttctgtaataactagaaataggattagtttgttgttgttgttccatgaatatatattgttttatacctcccatgtgatattttgctgcaaaaaaatgtttcgtgtgattaatctgtccAaaagtagcagattgtacaatactttggattgtataagccactactaccttcatccaaggtgtattttgatttggaaaattcatacttcatgagttttggcaaaaattcgtcaaattattggtactcgaattacttttaagatgttaattttattgcaattggcgatatattgatagagaaattaatggtcaaaatctacttttcaagaatttctcctgccaaaacgcaccttacatagggagtgtactctatattatgaaatgatgatttactatgagaacagatttaaattatgaaactaaggaacacatgtattccaaagaaaaaaatcatgttaaatagttttggacactttgttgctgcttagtaccctacataaattgtatttttgttgtttcatacatgatgaagatcttggtagttgtaaaatattccttttaagtaaatgctgttacaagtgaaacaacataagcaagcatccacttttagatatttcttacttttatacgaagagcaactaaataaaatAattttgtagggttcgctcatcaacatagaaggccctaagcgaggaatagacatgagggattatgctctaattgaatatgacatgaggatcaagacaggcaaacaagaaaaagatgacctacagctgattgatggtgcatcaatgataggccctgcaggcctatggaatcggccagaaacaatttgcattcctggcgattacggtgcagttgacataactttatcacgtttttattgttcagctgaggccaccgtacagattcttatatcagaagtgcaaagcagtttcaatttgttgctcggttgtttaaccagtaacttggataaggaaatccgtctctttgatggtgtcatcagtgagtcacgtggtttaaagaggtcggtggttgctgtaaggagggattctttcatagatttgaagttcgaagtgggcgcgtttccatccagtttcgaccagcattatgtttccttcaaggagAaaatccatggctatgatactcaagaaataaagactgattttgcgttaatctcagtaaaggtgacttggtcagctttgctttctggactagagtga
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| CDS seq | atgtcccacatcttgtcacgccctttcgatctcctgggtgcgcacatatgcgaattctccgcccaattccgcatcttccccgatgctctaacgccgccacctgatctcctgccccgatgcaccgcctcatctcttctccctctctcatggcatctgcagcggctagctggtgcggctagctggtggtcaccattgcttgctcgtggaggacccgtccgtcgtgtttcccgatttccttgggaacctcggaacatcaccaccatcagtcgagtaaaaggcgacgagtcatacaggcggcttccatcccaggaaaagaatcatactgcgatcactcaaggtatgaaaaccattgacaccaggggcacaatcttggaggttagagctggagatgagaaaagtaataaagatgcggcgtcctcagaggttttatatgtcaaatatgatatactggggcaaagtgcgaagcatgatggctgtgatgcggaggaccgaaggagtgaaacagaggaacaTGtggggggaatagttgtcagtgaggaggatgaagttcttgatcctgaagaatatactgtgaacaatatacttccaaaaagtagacaccgtgatggctctatatatatggacatcatggacacaccgtggaaaaaggagtttcatattgcagaccgtaatgagactcagttggaggcaatgaagttttcgaatcccacaaattgtgtcattcgcagaaatggaacttgcatgtcacattatcatcgctgcatgctgcaaattttatcattggagttggctaaaattacactggatggtggttcagtagagttgtatggatacatagctgtgcgggatgatctggatccgttgcttaattatatcgtcaattgtagcagggatgatccaatcattgtggagcagggttcgctcatcaacatagaaggccctaagcgaggaatagacatgagggattatgctctaattgaatatgacatgaggatcaagacaggcaaacaagaaaaagatgacctacagctgattgatggtgcatcaatgataggccctgcaggcctatggaatcggccagaaacaatttgcattcctggcgattacgctgaggccaccgtacagattcttatatcagaagtgcaaagcagtttcaatttgttgctcggttgtttaaccagtaacttggataaggaaatccgtctctttgatggtgtcatcagtgagtcacgtggtttaaagaggtcggtggttgctgtaaggagggattctttcatagatttgaagttcgaagtgggcgcgtttccatccagtttcgaccagcattatgtttccttcaaggagAaaatccatggctatgatactcaagaaataaagactgattttgcgttaatctcagtaaaggtgacttggtcagctttgctttctggactagagtga
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| Protein seq | MSHILSRPFDLLGAHICEFSAQFRIFPDALTPPPDLLPRCTASSLLPLSWHLQRLAGAASWWSPLLARGGPVRRVSRFPWEPRNITTISRVKGDESYRRLPSQEKNHTAITQGMKTIDTRGTILEVRAGDEKSNKDAASSEVLYVKYDILGQSAKHDGCDAEDRRSETEEHVGGIVVSEEDEVLDPEEYTVNNILPKSRHRDGSIYMDIMDTPWKKEFHIADRNETQLEAMKFSNPTNCVIRRNGTCMSHYHRCMLQILSLELAKITLDGGSVELYGYIAVRDDLDPLLNYIVNCSRDDPIIVEQGSLINIEGPKRGIDMRDYALIEYDMRIKTGKQEKDDLQLIDGASMIGPAGLWNRPETICIPGDYAEATVQILISEVQSSFNLLLGCLTSNLDKEIRLFDGVISESRGLKRSVVAVRRDSFIDLKFEVGAFPSSFDQHYVSFKEKIHGYDTQEIKTDFALISVKVTWSALLSGLE |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_07g0025060 | OsLaMu_07g0025060.02 | Chr07 | 27464926 | 27476849 | + | NAM | ||
| CDS seq | atgtcccacatcttgtcacgccctttcgatctcctgggtgcgcacatatgcgaattctccgcccaattccgcatcttccccgatgctctaacgccgccacctgatctcctgccccgatgcaccgcctcatctcttctccctctctcatggcatctgcagcggctagctggtgctggtggtcaccattgcttgctcgtggaggacccatttccttgggaacctcggaacatcaccaccatcagtcgagtaaaaggcgacgagtcatacaggcggcttccatcccaggaaaagaatcatactgcgatcactcaaggtatgaaaaccattgacaccaggggcacaatcttggaggttagagctggagatgagaaaagtaataaagatgcggcgtcctcagaggttttatatgtcaaatatgatatactggggcaaagtgcgaagcatgatggctgtgatgcggaggaccgaaggagtgaaacagaggaacaTGtggggggaatagttgtcagtgaggaggatgaagttcttgatcctgaagaatatactttggaggcaatgaagttttcgaatcccacaaattgtgtcattcgcagaaatggaacttgcatgtcacattatcatcgctgcatgctgcaaattttatcattggagttggctaaaattacactggatggtggttcagtagagttgtatggatacatagctgtgcgggatgatctggatccgttgcttaattatatcgtcaattgtagcagggatgatccaatcattgtggagcagggttcgctcatcaacatagaaggccctaagcgaggaatagacatgagggattatgctctaattgaatatgacatgaggatcaagacaggcaaacaagaaaaagatgacctacagctgattgatggtgcatcaatgataggccctgcaggcctatggaatcggccagaaacaatttgcattcctggcgattacgctgaggccaccgtacagattcttatatcagaagtgcaaagcagtttcaatttgttgctcggttgtttaaccagtaacttggataaggaaatccgtctctttgatggtgtcatcagtgagtcacgtggtttaaagaggtcggtggttgctgtaaggagggattctttcatagatttgaagttcgaagtgggcgcgtttccatccagtttcgaccagcattatgtttccttcaaggagAaaatccatggctatgatactcaagaaataaagactgattttgcgttaatctcagtaaaggtgacttggtcagctttgctttctggactagagtga
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| Protein seq | MSHILSRPFDLLGAHICEFSAQFRIFPDALTPPPDLLPRCTASSLLPLSWHLQRLAGAGGHHCLLVEDPFPWEPRNITTISRVKGDESYRRLPSQEKNHTAITQGMKTIDTRGTILEVRAGDEKSNKDAASSEVLYVKYDILGQSAKHDGCDAEDRRSETEEHVGGIVVSEEDEVLDPEEYTLEAMKFSNPTNCVIRRNGTCMSHYHRCMLQILSLELAKITLDGGSVELYGYIAVRDDLDPLLNYIVNCSRDDPIIVEQGSLINIEGPKRGIDMRDYALIEYDMRIKTGKQEKDDLQLIDGASMIGPAGLWNRPETICIPGDYAEATVQILISEVQSSFNLLLGCLTSNLDKEIRLFDGVISESRGLKRSVVAVRRDSFIDLKFEVGAFPSSFDQHYVSFKEKIHGYDTQEIKTDFALISVKVTWSALLSGLE
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_07g0025060 | OsLaMu_07g0025060.03 | Chr07 | 27464926 | 27476849 | + | NAM | ||
| CDS seq | atgtcccacatcttgtcacgccctttcgatctcctgggtgcgcacatatgcgaattctccgcccaattccgcatcttccccgatgctctaacgccgccacctgatctcctgccccgatgcaccgcctcatctcttctccctctctcatggcatctgcagcggctagctggtgctggtggtcaccattgcttgctcgtggaggacccatttccttgggaacctcggaacatcaccaccatcagtcgagtaaaaggcgacgagtcatacaggcggcttccatcccaggaaaagaatcatactgcgatcactcaaggtatgaaaaccattgacaccaggggcacaatcttggaggttagagctggagatgagaaaagtaataaagatgcggcgtcctcagaggttttatatgtcaaatatgatatactggggcaaagtgcgaagcatgatggctgtgatgcggaggaccgaaggagtgaaacagaggaacaTGtggggggaatagttgtcagtgaggaggatgaagttcttgatcctgaagaatatactgtgaacaatatacttccaaaaagtagacaccgtgatggctctatatatatggacatcatggacacaccgtggaaaaaggagtttcatattgcagaccgtaatgagactcagttggaggcaatgaagttttcgaatcccacaaattgtgtcattcgcagaaatggaacttgcatgtcacattatcatcgctgcatgctgcaaattttatcattggagttggctaaaattacactggatggtggttcagtagagttgtatggatacatagctgtgcgggatgatctggatccgttgcttaattatatcgtcaattgtagcagggatgatccaatcattgtggagcagggttcgctcatcaacatagaaggccctaagcgaggaatagacatgagggattatgctctaattgaatatgacatgaggatcaagacaggcaaacaagaaaaagatgacctacagctgattgatggtgcatcaatgataggccctgcaggcctatggaatcggccagaaacaatttgcattcctggcgattacgctgaggccaccgtacagattcttatatcagaagtgcaaagcagtttcaatttgttgctcggttgtttaaccagtaacttggataaggaaatccgtctctttgatggtgtcatcagtgagtcacgtggtttaaagaggtcggtggttgctgtaaggagggattctttcatagatttgaagttcgaagtgggcgcgtttccatccagtttcgaccagcattatgtttccttcaaggagAaaatccatggctatgatactcaagaaataaagactgattttgcgttaatctcagtaaaggtgacttggtcagctttgctttctggactagagtga
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| Protein seq | MSHILSRPFDLLGAHICEFSAQFRIFPDALTPPPDLLPRCTASSLLPLSWHLQRLAGAGGHHCLLVEDPFPWEPRNITTISRVKGDESYRRLPSQEKNHTAITQGMKTIDTRGTILEVRAGDEKSNKDAASSEVLYVKYDILGQSAKHDGCDAEDRRSETEEHVGGIVVSEEDEVLDPEEYTVNNILPKSRHRDGSIYMDIMDTPWKKEFHIADRNETQLEAMKFSNPTNCVIRRNGTCMSHYHRCMLQILSLELAKITLDGGSVELYGYIAVRDDLDPLLNYIVNCSRDDPIIVEQGSLINIEGPKRGIDMRDYALIEYDMRIKTGKQEKDDLQLIDGASMIGPAGLWNRPETICIPGDYAEATVQILISEVQSSFNLLLGCLTSNLDKEIRLFDGVISESRGLKRSVVAVRRDSFIDLKFEVGAFPSSFDQHYVSFKEKIHGYDTQEIKTDFALISVKVTWSALLSGLE
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_07g0025060 | OsLaMu_07g0025060.01 | Chr07 | 27464926 | 27476849 | + | NAM | ||
| CDS seq | atgtcccacatcttgtcacgccctttcgatctcctgggtgcgcacatatgcgaattctccgcccaattccgcatcttccccgatgctctaacgccgccacctgatctcctgccccgatgcaccgcctcatctcttctccctctctcatggcatctgcagcggctagctggtgcggctagctggtggtcaccattgcttgctcgtggaggacccgtccgtcgtgtttcccgatttccttgggaacctcggaacatcaccaccatcagtcgagtaaaaggcgacgagtcatacaggcggcttccatcccaggaaaagaatcatactgcgatcactcaaggtatgaaaaccattgacaccaggggcacaatcttggaggttagagctggagatgagaaaagtaataaagatgcggcgtcctcagaggttttatatgtcaaatatgatatactggggcaaagtgcgaagcatgatggctgtgatgcggaggaccgaaggagtgaaacagaggaacaTGtggggggaatagttgtcagtgaggaggatgaagttcttgatcctgaagaatatactgtgaacaatatacttccaaaaagtagacaccgtgatggctctatatatatggacatcatggacacaccgtggaaaaaggagtttcatattgcagaccgtaatgagactcagttggaggcaatgaagttttcgaatcccacaaattgtgtcattcgcagaaatggaacttgcatgtcacattatcatcgctgcatgctgcaaattttatcattggagttggctaaaattacactggatggtggttcagtagagttgtatggatacatagctgtgcgggatgatctggatccgttgcttaattatatcgtcaattgtagcagggatgatccaatcattgtggagcagggttcgctcatcaacatagaaggccctaagcgaggaatagacatgagggattatgctctaattgaatatgacatgaggatcaagacaggcaaacaagaaaaagatgacctacagctgattgatggtgcatcaatgataggccctgcaggcctatggaatcggccagaaacaatttgcattcctggcgattacgctgaggccaccgtacagattcttatatcagaagtgcaaagcagtttcaatttgttgctcggttgtttaaccagtaacttggataaggaaatccgtctctttgatggtgtcatcagtgagtcacgtggtttaaagaggtcggtggttgctgtaaggagggattctttcatagatttgaagttcgaagtgggcgcgtttccatccagtttcgaccagcattatgtttccttcaaggagAaaatccatggctatgatactcaagaaataaagactgattttgcgttaatctcagtaaaggtgacttggtcagctttgctttctggactagagtga
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| Protein seq | MSHILSRPFDLLGAHICEFSAQFRIFPDALTPPPDLLPRCTASSLLPLSWHLQRLAGAASWWSPLLARGGPVRRVSRFPWEPRNITTISRVKGDESYRRLPSQEKNHTAITQGMKTIDTRGTILEVRAGDEKSNKDAASSEVLYVKYDILGQSAKHDGCDAEDRRSETEEHVGGIVVSEEDEVLDPEEYTVNNILPKSRHRDGSIYMDIMDTPWKKEFHIADRNETQLEAMKFSNPTNCVIRRNGTCMSHYHRCMLQILSLELAKITLDGGSVELYGYIAVRDDLDPLLNYIVNCSRDDPIIVEQGSLINIEGPKRGIDMRDYALIEYDMRIKTGKQEKDDLQLIDGASMIGPAGLWNRPETICIPGDYAEATVQILISEVQSSFNLLLGCLTSNLDKEIRLFDGVISESRGLKRSVVAVRRDSFIDLKFEVGAFPSSFDQHYVSFKEKIHGYDTQEIKTDFALISVKVTWSALLSGLE
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr07 | 27465097 | 27473011 | + | OsLaMu_07g0025060.01 | OsLaMu_07g0025060.01,OsLaMu_07g0025060.03,OsLaMu_07g0025060.02 | All |
| A5 | Chr07 | 27473044 | 27473458 | + | OsLaMu_07g0025060.01 | OsLaMu_07g0025060.01,OsLaMu_07g0025060.03,OsLaMu_07g0025060.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 2.100840 | 0.000000 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0646600 | SBH | 5.391610 | 7.144322 | 8.804140 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g45194 | SBH | 2.855486 | 3.775033 | 1.780208 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0646600 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0025390 | SBH | 4.494284 | 19.975655 | 17.351009 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0025310 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0025290 | SBH | 5.052930 | 5.726491 | 22.455086 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0025310 | SBH | 1.124307 | 0.675823 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0025330 | SBH | 26.414890 | 9.363059 | 24.355761 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0442700 | RBH | 4.5853915 | 3.4709785 | 3.309221 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0025820 | RBH | 1.081846 | 0.600679 | 1.727962 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0454400 | RBH | 0 | 7.5595935 | 5.5632465 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0025140 | SBH | 1.286270 | 0.195170 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0025220 | RBH | 2.122537 | 4.930574 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0025150 | RBH | 22.263231 | 6.016223 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0025350 | RBH | 2.708338 | 0.958452 | 1.230944 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0025220 | RBH | 0.882515 | 6.854999 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G025060 | RBH | 1.634967 | 3.474146 | 3.776428 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0025070 | RBH | 6.176726 | 17.886311 | 9.603145 |
