Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_06g0012080 | OGI:06028900 | 16/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr06:11284796-11298084 | ||||||||
| Gene Symbol | CTF, OsCTF | ||||||||||
| DNA seq | ttgaaatgtgcctactcgtgaaagcaaaaatatagcaacattatttcctcgaaaaggagataagAaaaaaatggcagtactttttgagtgtttgctacacttgagccctctaatccgctcgttaccatgccaacaacatctaagcttgactgccgccttctggtaaccgagaaggctgatcatttccttgcccctgttgctgagaccttctgacaaatgacaaaaacttgtggattgcagcacagcctagtgcaccgataacaaatgcaatgacatatccagaaggttcccatctcatgctcgacccagccacgtaggctagcagtaggccgagcaagtccagcacaattgtaatattcatcacccttagccacctgttcttctttagcagttccgtcggtagcaataggatgataacaacaatagatgccacaaaagaagttgagttgctgtagaagaaggtgaggtagcgatacctcttattgtcatgcataaccgagtgacccacaccatgcccgtcactattaccctgccacacaccgccaggtgggttcagaccagcctggtaagtaacacttgcagccaggacccctagcaacatcaagtacttgcgcttggcatggtatttggctctgtccttgtctttctcaacgggctccttggatatgtcatctcgcttctctttgctctcactttgatagaaacacaccaggagtatgatcataatgaaaagcaccacagctaccaacacaaagacataaatggatgttttcaaatgttgagtgcttccggcagcataggctcccagaagagcaaacaagcctgctgcagtgcaaaccgaaagagcatagctttgtatagctggcctatacagatttgggttcacgaggagtatgatgagggaaagagatgacatgaagcttaccgagttacaatagagaaatgccttgtaacggcgtggaaagttgtaaaagagtattggatcaccagcatggcgcccaaaaccatcatccacaactctgaacccacctggtggggtcaacccagcttgataagtgagggtcgcgcccaaaacagcgaaaaggagcaacctcttgcgccttttgtcaatacatgaatctttctcagcaagattgccctcagctgaattattttgggtgcgcacaactgaaccatttcgtacagaattcgtgttcccaacttccttctccttgtcattgtcttcaagcgtgaagaacacaacatgaatcaccacatagactagaacaccgcctgccaaggcaatgatgtaaactgatgtggttatgtcccggcagcttccagcagcatatgcacccatgagaccaaacagatccaaaatcatagttatctctagaatgcggcgcctgagcaaaggtttataccggaccaaaactatgacaaccaatgatgctgcaaaggctgtcgagttacagtaaaagaacaccttgtaacgtttggcttgtgtggataagagtattggttcgccagccatgtgcccatcttggtttttctgccagacaccacctggtgggactagccctgcttggtaagtaacagttgccacaagagtggcaagcagtacaacaagagattgggccttctccagaatatctgtcttactgcttgtattctttctggaactgttaattcaaacaaagttaacattaaactaaagatggcaacaggataggcagcagaaaaatgtttgtgttcagtacctgctatctgatggccctcccggtgaacatgataactttgcaattattggcaagcaggatatgtttgaaagttgtggcagaaaaaataggactgcctggagggcgcctatgcataaaagaacagcaccaaccagactgagtacatagatggtagtgtcaggctttctgcagctgccagccacataggcccccacaaggcctaaaagagcaatggtgatgtacgcgtagagcacataagtccgtacggtgatggtgatctttatcttgtcgaGgggtaagaagatccgctgcttcttgtccagaagcagcatgatgatgagcagggatgcgacaaatgcaattgtgttgcagacaaagaacgccctcagacggcgagagtggtgttcccacaggacgggatcgcctggatggtggccctcctggttgttatcccagtagccacccggtgcgctcagcccagccatgtatgtgatgcttgccacaaatgttgcgagaagcatcagtaccttgcggtgccgttttttcttctcatcacctggtcaatttcccctctgaatattgacatggtccatatttagtgcgctgaattaggaggattagtagattacctgagcttatatcctgagtctgtttcttgtcaagccataaagttaccaccatctgtgccaccatatagatgaaagtagccacaagtgcagagacgttgccggctgtgagaacaccccgactggtccctgcagcataggcccccatgaggcttagcaggtccagcaccatggctgctcgcagtggaagcatggggatctgtaacttccccttctcatgcaggatagcaaggatgaagatgaggatgatgaccacgatggacagcgcgaatgcagtcgcgttgcagtagaagaacataaggtatcggcgatactggctatcccggatgatggagtcaccagcgaggtgcccggcctcggtgtcctgccagacaccccccggcgggctgaatcctgcaccatatgtcaccgtggccacaagggtggccaacagaaggaggtacttcctcaaatcatactccaatggtgagtccgtcctctcttgctcgctattctccatttgcaggagagatagaagcagaaaggaggtactccaagttgtgaatggatcaatgctaataaggtgctttgctatgcataatgatgtatatagctgtgcttctcttgcctaataatgatgccatggatgggcttagcattatcaatgaagatgtagactggaagactttgcccaagtcgtctttttatattgatctgtctcatcttctttattccttgtggggttctcacatcccactgtttcaaattgactagcattgtcgtatgaaagaaacgtgcaatgatttgaggcttaccatagttcacgagagcagaaagagacttttattgtttttattgtgtcatgctgtgtgagctggacatatcaatactttacatgactacaaagacttgttcctatgcatgttccaggaatgactccatggaatctattatccaactcctaataagtcatatattgtgggcacgttgctgtcactccgctaaactccagtgtcagatatgttgtgtgcagtatttctctgtacaacttatgtgcaggtatgatatgcaagaaacagctggatgtcgttgtctgaacttagatacccTttttgggcatcaacctgttgctgtttgacagaacgctggaggacagttcatgtttggtgaaatgctttctgtggatctgcatacctgctgtctgatgaaatatcttgatggattaaccatcttgggagtggcaggccacttatgctatgccttcatatcaccttttcgataatggtgaccatggtagatggaggtaagtacttcaggtgcgtatccagcttgccttctgtatttatttcaatttgcctgtcttgtatttacttgtaaattttgattgtatatgttaacgtatcacaagaatccaagttcaccaaagcatttggttgattttgtcacatgctagctgtcaccgtagtggcacagactggaagacttactattatactattatacagtactgcaggttgggtcttggtctattggatgtagtggccatgagctttatatacaccatatgttatctaagctctagaattagtaagaaaagtaaagtggtgcaagcatcttttagtactttataatgtatttgtcccagtatataggattacttaacatgatttggaaaaatcttctggggaaaatactggtgtctgttcataatatagttaagaggataaataaaggacagaagcgcagagtaattactttaggttggattcattaagattgaatggaaaggatccgatacaagatggctgttagatgagtttaggcacctccccacttgcgacgaacaatgaaggatagatattaataataaaattggtaatgtatgaaatttagactccaaacaggcaaccaattgactatgaaagttgataatgcaatctttaggtaataaaataagatgtgaggagctacattgctagaccctgcaaatggaattgacgcattcatgcatcatggcagatattaaatcctgtttgttatgtaatgttacaatatatagaatcctgcaactgttcatgttagagaaatggaaacggaatgtcttagttgcgcaaactgcaagtactataatgttgcattattagtgagccaggtcagcacagttgagttcatgatgggacatgtctttatttttggtttataattacaaatgactctttttggtctttgacaatgccggaatccgcttaccatatattcactagatgtggttggtaaaactgtcgtgtggattagctccttttccccttgataatagaggcatatctctgtacacttttccttggaaaataaaagtgtccttttcttattcggcaatatttgcaaaatcaaataggataccatgaggggggggggggggggggttatagtactaaaagcttggtgttcatatggagtacaatgaaatagtattactcgtctatatcagctatcagcatgcatatcccacggtagctgcctagctggcatggaaaaggcaataaattagccctttctaagtattactcctacatagtaaggtgtagaagagagtgaagaaagagttgtttctttgcagagaaattactcggacacgttgctccaagcaatatgagttagcttatcttttgtttcactaaataacagttctggataagtagttgttacctagcttctcgttaagttcagtcctggagacaatttttgaaaaccgctcgattttcgtggaaaccggtggttttgagctggctgaagatcataaccggttctgtaaaccaaccgaattcaaaatagttcagactgaattttcagtttttaacaaaatttggtcaaattttataggtaatcaacggttttctcaaaaacaggaagtaccactcaggagcggttttagaggccagttcgattgtgaacactggttatagctatcagaatctccccagaaatggtcaatagtgttattgtagttatcttctagcactgcatttttgtcacttgggacagcagctacctcaattgttttacacgagttgattctcttaaaacgacgtaaaatgcatagcatatcattgtcatggggacccagccatgtgcactggattcacgcagtaacaaaaaaaaaattatgtttgtgaaatgaataatttcattttcagaggccgtttctgtggtagccactttgacagaaggttctagtctctggtgatgcttccaaattatgtgctcgtgtcatgtctttatcctgtgtatcagtgatgacaatttgcttaggcttcattttctctgtgctcatatgaagattattgcaactcaacctcaagattcatatggttcactgctgtcagatagatataactaaaatataaattttgcttcattataatcatcctaactgaacaaagtttcttaatctggtggagatatgttttattggtcaccaccaagtagttggcctgagttggacacttgtacagtttacaggaccgggataactcatgacttgctggtctcagtcattatgtcgttcagttcctctgctagactagctgagcatgtttagcggtttagccttgttcgttggcaatcaataaaaaataggcttcacgctaccacaggtcaactgaaaatgtggccatgtttcactcattaggaattaaaaaaagcgtagtgtgatttcactccttattaggaattaaaaaaaagcgtactgtgatctggcaaacgaatgcaattttctaaatcagtatgaatttatgtttgtcttgagacagattatatatatgcatgaaagtaattgtgtactggccagttgcatcactaggggaggaaccatctttgtccggtcaaccaaaaatcacaatagtcccggttgcaataaaaacaggactaataatggtttttagtcccggtttatgagcagaacgggactacgtgatctttagtcccggttgataacatctttagtcccggttcacatactgatcaggggttgttagggccctcctggatctttagtaccggttggtaactccaaccgggagtaaagatcggatctttaatcccggtttgtattatcaaccgggactaaagatcacgatgatctttagtcccggttggtgcaaccaaccgggactaaagatcaaaacgcactatataatccctattacttatcctcttttcccgtccaaacaagctcctctaccccttcatctctaatccttatctcttcctcttctcttctctttcagtctgcgcagcagttcctccttatctcttctctttcagttatgcacgctgagattaactgcaccaccatgcagttgcgctgaaggatagggagaaaaatctgcatgcgagtagatcacggcaacaactacatgtgggatgggtatgggtttatgcagccagaggagggcgggccggacgccggtgggcggcgcggcggcgcggagggccgcacggtggcgcggcggcggccggggaggaggggaggcggcagcggctgagccagccggcggctttgctttatttcTttttttttataagaatttgtgatccatgtatagattgagatgaagaatttgtgatgtatatgatttgtgtatttgggatgtttctttgatttgggatgtataatccgtggtgtatataattgatttgtgtatttgggatgtataatctatggtgtatatgattgatttgtgtatttgggatgttactttgatttgaggatatgcatcccacctaatttgggagaaaataaattagagattaagtagtaattagcaataaatgaaaaaaaactaaccgggactgccgctcccatctaacactaaccgggactaaagatatttgaaccggatctttagtcccgaatacgtagtcccggtttaaaaaccgggactatagggggttacgaaccgggactaaaaacgatctctccaccagtgcatgtagcttagggatggcaacaggatgggtcagggtgggttgggctggaacagccccgtccccaacccccaacttctccattgccctggccccgagtggagatgcagggccgaatcaggtctcgtccatgacccctctagggcttcgcaactcgaccgggacccagcattgagttgccactccattcaatcagtacaaaaaatacaagacaatcatcaattcagcaaaaacaaatattttatataattgacacatcataaaaaatggcatgaatatttgaatagcatcctaaaaaattcagtaagaacacaattacataaatatttccatgatccatcattccatcatcctgtgcgccggcctgtgcatcgccttgcgtgccgccggagggagaggggagagtggagaggacgggaggctggaggggagtgggcgaccggtgataggcagaaagagaacgaagccggcgagagagtcagagagagacaagatccggagagagtgtgccacctccacctgtgtgtggctgcgtggggctgtggggggtcttgggagaggataagtaagggttagctagttagatttttgcttatataccccagtatttcatcaagttgagctttggggctaaattgtcacccacccccggcctcgcgagggagattgccatctctagtagtttacaataccagaggggggctttagagatgcctatactttcaagagtaactgcattgcataaggttaagctttggtgcagctgggctagggatgcaaatcgcacacgcaggtgctccctctctggttctatttcacatggcatctctcggctgttcccaggggcggagctagagcgaaacagagggtggtgccacttgcttaatttactctactttagattgagtttaagctgatacgggtgcctaagtttgtattgagggggtgcatacatagtgaaaatagatgaggtatagctaaaaagttttcttgaccgggttcctagacaccctcctaacatatactacctccgcccctggctgtgccaacgagttggactccaatccaggaatctccatgtattcaacgctttcaaattgcgtgttatctcaaaaatcagaaacttctaactcaaacaaatcaaaacattcatctcaaaattgtaaaacatcctttcatatatctaaaactttctatttcaaaatcacaaacctttgaattgaagatccaagatctcttcatctcaaaattcacaaaaaaatttgattcaaatttagaattttcatctcaaaatAaaaaaaaattctatacaaatctaaaactttcatcctagacatcacaaaactttccattcaaaaataaaaactttcatgtaatactcaaatccctcctcttcttcctcatcgtcttcctagctcctgctcactaaggcctcattgtgtgtgcttgccgatgttcctcctgctctagagaagctagcacgagcttgatatggtgcatgagggtggcggcaatcgagatgacaaagtctttccggtggaagaagcggctaggggccacaccgcttgcctgacagctagggtcgaggagctagggtggcgcggcatggctagaggatctgacctagcgacatagagggagataaggggatggagggttggctggaaaagaagacaaggtcaagggatacgggcacaagcacatttgatggtgacatcaggcctaaatgttatttgatgtagcctagaacctagaggggaggggggagggggttgaatatgtgatacttgaaaattttatcaaattttcacaatggactagtaaagaccggagcttctagtttatgttctagaacttctagtctagtttagaagtttggaccaattcactgaagtcttcgttccaagcaaggagcgaaaattacacttagaaagagcaagctcttgactcaaaaacgagttgaaccacaacttagcaagcatgcagaggaacctacaaagcaactttgatacaagcttaaacaaccattagcatgaattaggcgaaaacaagtaatagcggtaaagtagataatagataagtcataagtagtctccgttgagggattcctaagagccaggttgcgttcaatgctcaacctcaccaagcgaccacaaagattgagcttggtccactcaatagatagtcatatagctatcttcacagcttgcacacaaattttgcttcatcgtgatcatcctaattgaacacaagtttcttgatctgacggagaatacgttttatcattggtcagcaggtagctagctgacatgagttgcacacttgcatagtttacaggaccctgataatgcatgacttgctggtctgaattatatagttgttcaattcgatccccttacagacttgcaggcagctggaagtctggactcgaatcatatcaatgttcgtcaaccatcaacaaggaaaaaaaggacttcgcactagtgccatgtttcacaccttacaagctaggaattaacaatcgtcctatgatcagggaaaaaatgttacatcttcatacaattttcatcagcaatatgagtttctgttcgacgtgagacacagaatacgcgtgagtgtgagattgtgtactggccaggtgcatgcgatttaatgccctactcctttatttcatattataaatagctttgaTtttttttctagtcaaatttcttgaagtatgaccaagtttataggaaaatttagtaacatctacaacacgaaattagtttcattcaaactaacatttaatatattttgataatatgtttgttttatatcgaaaatattactaaatgtttttataaagttggacaaatttaaagaagtgtaaataggaaaaaagtcaaaacgacttataatatgaaatggaagaagtagttgacgtcgttgcttttgtctttaacgagtaactttatatgttttacaatgtgtacagttggtccagtagacattAaaaatgataaacacatattttgtaacactagactctccatcaagcagaagcaacattAaaaaaagtgtacaacagcaataagcaactgtctgatatggatacactacacacaaggtgcacacattgtcaaacgttgtcagctgatcctgatgaccgtgaggccggtcgagctacttccagcgtcgatctagacgactgcgaggtcgaggaggagctacgtacctccgtcgttgccctgccctccgatcccttcctgtcacggagagacaggaacacatagatggctacataagccagcaccatgacggccatggcgacgacgtacccggaggtgccccagtccctgctgctgcctgccgcgtacgccaccagtaggccgagcaggtcgagcacgaccaccatgtgcattggcccgaaccggtcagggtcattgagctctgggaggatcaaggtcccttgcaggaggagaacgatggccacgatggatgccgcgaaggatgtggagttgctgtagaagaaggcgtggtaccggcggccgtcggtgtcccccaggatggggttccccgctgcgtgccccttgccgtcgttcgtcggccacacgctccctggcggcactaggccggcctggtacgtgacgctcgctgccaggatccccagtagcgtcagatacttgcgcatcttgtacttctctttgtactcatcagtggtctcttcatcatgattattggtgcacttctttcctgtcgaacctttagaccccgttgcctgatcatgattcttagtgacctcgtcttgcttcttggaagagaagaaggaaagacaaccaatgagtattttatggaaaaatttgatgtgtagagcggcgaaaataagcaccgcgccgaccaaggcgaagacgtagatggacgtccgcagccttcgggtggttccggcagcgtaggcacccatcaatccgaccaagcctgcagccatgcaggcatagagtgcgttgcagtagcctacggcgatgctggagaggttccaactcatcaagcaaactatggcaatgacagatgccatgaagctcgtcgcgttgcaatagaagaatgccttgtatcggagagggtaattgtccgcgagaatcgagtcaccgaagcggtggtcttcatcggtgtgctcgatccagaagcctcctggcggggtcaacccagcttggtaggtgatggtgacggctagaattgcaagaagcagcaatagtttctgcttcttctccagcttgcttttctcctccaacttaccctttttgtcatgtggaagcttgctaatcacaacgtagattgccaccaccaacacaaagatggccacagccaatgaaaagacatagatggaggtgcgcacgtctcggcagctcccagcagagtatgcgccgatcaggccaaagaggtcgagtatcacagctgcctcgagtgcacgccggccgatcagagacctactctggaccatgatgatgacgatgatggatgctacgaaggcagctgagttgcaataaaagaacaccttgtaccgcttagcatgggttgcggggagtatcaagcccccaccactatggccattgtcgtcgtctctccagactccaccgggcgggtctaggccggcctggtatgttacggtcgtgatgagagtggccagcagaagtatcagtgaccgtgccctctcaacgggatctgtgctgtcttcacggtttttggaggccggattacgtctggatcctgttgctatagatggctcgccctgacacggcccaggcatgaccgggtctgggccgaggtcagtcgggctagcacagtccgacctacacgccgggccgggccgggccgttgctgtcatccagccgcaacaaccatgtgtttgtgcttgcggtttagtttttttggataaaaacttgatcacagcaaggcaagaaatgtataggaggacagcgccgatcaggcagaggacgtacacggtggtctccgtctccctgcagctgccggatgcgtaggcgcccatgagaccaagcagcgcgaaggcgatggccacgttcagcgccgatagccttctcccgttgttgcccattctggtgctcaggagcaacatgatgacagtgagcgacgcgacgaacgcgacggtgttcaagacgaagaacgccacgaagcgccagtagtggccctcctgcaggacggggtcaccggcgcggtggtggccaccggcggcggcggcggcgccaccctcctcggcagcatgctcccatgtgccacccggagggctcaaacctgccgtgtacgtgatcgtcaccatgaagatggagagcagcatcaagaccttgcgccgctctttggggcggagcttgccatcctccacggcctccttcatgtcaagcgggttacttgagcaaccatggagatggccatcctccatgtccatggccttctccttgtcaggtgagtcgtgcactgtcttcttctcaggcgtgtcggtagaaggggcgaccagcgcatgaaccacgatgtagacgaagatggttgccgaaagcaccgaggcgaagatggtggtgagcctgccccggcagctcccggcgatgtaggccaccatgaggcagagcagatcgaccaccatgacccctcgcaccgccatgagccggggcccctccacgcggaacgggaggaggaggatggtgagcacgagcgacgccacgaacgccgtcgcgttgaagtagtagaacaggtcgtaccggaggcggcgggtgtccggcaggatggggtcgccggtgaggtgttcgtccgtggtctccagccagacgccccccggcgggtcgagccccgcgatgtaggtcacagtcgccaccaggatggcgagcagcaggaggtacttgcgcagctgccactcccgcgatttggggtggctcgccaccgtcgccttcccaccaccacccggctgctgcttgttgtcgtcggcgtcgggctccat
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| CDS seq | atggagcccgacgccgacgacaacaagcagcagccgggtggtggtgggaaggcgacggtggcgagccaccccaaatcgcgggagtggcagctgcgcaagtacctcctgctgctcgccatcctggtggcgactgtgacctacatcgcggggctcgacccgccggggggcgtctggctggagaccacggacgaacacctcaccggcgaccccatcctgccggacacccgccgcctccggtacgacctgttctactacttcaacgcgacggcgttcgtggcgtcgctcgtgctcaccatcctcctcctcccgttccgcgtggaggggccccggctcatggcggtgcgaggggtcatggtggtcgatctgctctgcctcatggtggcctacatcgccgggagctgccggggcaggctcaccaccatcttcgcctcggtgctttcggcaaccatcttcgtctacatcgtggttcatgcgctggtcgccccttctaccgacacgcctgagaagaagacagtgcacgactcacctgacaaggagaaggccatggacatggaggatggccatctccatggttgctcaagtaacccgcttgacatgaaggaggccgtggaggatggcaagctccgccccaaagagcggcgcaaggtcttgatgctgctctccatcttcatggtgacgatcacgtacacggcaggtttgagccctccgggtggcacatgggagcatgctgccgaggagggtggcgccgccgccgccgccggtggccaccaccgcgccggtgaccccgtcctgcaggagggccactactggcgcttcgtggcgttcttcgtcttgaacaccgtcgcgttcgtcgcgtcgctcactgtcatcatgttgctcctgagcaccagaatgggcaacaacgggagaaggctatcggcgctgaacgtggccatcgccttcgcgctgcttggtctcatgggcgcctacgcatccggcagctgcagggagacggagaccaccgtgtacgtcctctgcctgatcggcgctgtcctcctatacatttcttgccttgctgccggcctagacccgcccggtggagtctggagagacgacgacaatggccatagtggtgggggcttgatactccccgcaacccatgctaagcggtacaaggtgttcttttattgcaactcagctgccttcgtagcatccatcatcgtcatcatcatggtccagagtaggtctctgatcggccggcgtgcactcgaggcagctgtgatactcgacctctttggcctgatcggcgcatactctgctgggagctgccgagacgtgcgcacctccatctatgtcttttcattggctgtggccatctttgtgttggtggtggcaatctacgttgtgattagcaagcttccacatgacaaaaagggtaagttggaggagaaaagcaagctggagaagaagcagaaactattgctgcttcttgcaattctagccgtcaccatcacctaccaagctgggttgaccccgccaggaggcttctggatcgagcacaccgatgaagaccaccgcttcggtgactcgattctcgcggacaattaccctctccgatacaaggcattcttctattgcaacgcgacgagcttcatggcatctgtcattgccatagtttgcttgatgagttggaacctctccagcatcgccgtaggctactgcaacgcactctatgcctgcatggctgcaggcttggtcggattgatgggtgcctacgctgccggaaccacccgaaggctgcggacgtccatctacgtcttcgccttggtcggcgcggtgcttattttcgccgctctacacatcaaatttttccataaaatactcattggttgtctttccttcttctcttccaagaagcaagacgaggtcactaagaatcatgatcaggcaacggggtctaaaggttcgacaggaaagaagtgcaccaataatcatgatgaagagaccactgatgagtacaaagagaagtacaagatgcgcaagtatctgacgctactggggatcctggcagcgagcgtcacgtaccaggccggcctagtgccgccagggagcgtgtggccgacgaacgacggcaaggggcacgcagcggggaaccccatcctgggggacaccgacggccgccggtaccacgccttcttctacagcaactccacatccttcgcggcatccatcgtggccatcgttctcctcctgcaagggaccttgatcctcccagagctcaatgaccctgaccggttcgggccaatgcacatggtggtcgtgctcgacctgctcggcctactggtggcgtacgcggcaggcagcagcagggactggggcacctccgggtacgtcgtcgccatggccgtcatggtgctggcttatgtagccatctatgtgttcctgtctctccgtgacaggaagggatcggagggcagggcaacgacggaggtacgtagctcctcctcgacctcgcagtcgtctagatcgacgctggaagtagctcgaccggcctcacggtcatcaggatcagctgacaaccaccttattagcattgatccattcacaacttggagtacctcctttctgcttctatctctcctgcaaatggagaatagcgagcaagagaggacggactcaccattggagtatgatttgaggaagtacctccttctgttggccacccttgtggccacggtgacatatggtgcaggattcagcccgccggggggtgtctggcaggacaccgaggccgggcacctcgctggtgactccatcatccgggatagccagtatcgccgataccttatgttcttctactgcaacgcgactgcattcgcgctgtccatcgtggtcatcatcctcatcttcatccttgctatcctgcatgagaaggggaagttacagatccccatgcttccactgcgagcagccatggtgctggacctgctaagcctcatgggggcctatgctgcagggaccagtcggggtgttctcacagccggcaacgtctctgcacttgtggctactttcatctatatggtggcacagatggtggtaactttatggcttgacaagaaacagactcaggatataagctcaggtgatgagaagaaaaaacggcaccgcaaggtactgatgcttctcgcaacatttgtggcaagcatcacatacatggctgggctgagcgcaccgggtggctactgggataacaaccaggagggccaccatccaggcgatcccgtcctgtgggaacaccactctcgccgtctgagggcgttctttgtctgcaacacaattgcatttgtcgcatccctgctcatcatcatgctgcttctggacaagaagcagcggatcttcttacccCtcgacaagataaagatcaccatcaccgtacggacttatgtgctctacgcgtacatcaccattgctcttttaggccttgtgggggcctatgtggctggcagctgcagaaagcctgacactaccatctatgtactcagtctggttggtgctgttcttttatgcataggcgccctccaggcagtcctattttttctgccacaactttcaaacatatcctgcttgccaataattgcaaagttatcatgttcaccgggagggccatcagatagcagttccagaaagaatacaagcagtaagacagatattctggagaaggcccaatctcttgttgtactgcttgccactcttgtggcaactgttacttaccaagcagggctagtcccaccaggtggtgtctggcagaaaaaccaagatgggcacatggctggcgaaccaatactcttatccacacaagccaaacgttacaaggtgttcttttactgtaactcgacagcctttgcagcatcattggttgtcatagttttggtccggtataaacctttgctcaggcgccgcattctagagataactatgattttggatctgtttggtctcatgggtgcatatgctgctggaagctgccgggacataaccacatcagtttacatcattgccttggcaggcggtgttctagtctatgtggtgattcatgttgtgttcttcacgcttgaagacaatgacaaggagaaggaagttgggaacacgaattctgtacgaaatggttcagttgtgcgcacccaaaataattcagctgagggcaatcttgctgagaaagattcatgtattgacaaaaggcgcaagaggttgctccttttcgctgttttgggcgcgaccctcacttatcaagctgggttgaccccaccaggtgggttcagagttgtggatgatggttttgggcgccatgctggtgatccaatactcttttacaactttccacgccgttacaaggcatttctctattgtaactcggtaagcttcatgtcatctctttccctcatcatactcctcgtgaacccaaatctgtataggccagctatacaaagctatgctctttcggtttgcactgcagcaggcttgtttgctcttctgggagcctatgctgccggaagcactcaacatttgaaaacatccatttatgtctttgtgttggtagctgtggtgcttttcattatgatcatactcctggtgtgtttctatcaaagtgagagcaaagagaagcgagatgacatatccaaggagcccgttgagaaagacaaggacagagccaaataccatgccaagcgcaagtacttgatgttgctaggggtcctggctgcaagtgttacttaccaggctggtctgaacccacctggcggtgtgtggcagggtaatagtgacgggcatggtgtgggtcactcggttatgcatgacaataagaggtatcgctacctcaccttcttctacagcaactcaacttcttttgtggcatctattgttgttatcatcctattgctaccgacggaactgctaaagaagaacaggtggctaagggtgatgaatattacaattgtgctggacttgctcggcctactgctagcctacgtggctgggtcgagcatgagatgggaaccttctggatatgtcattgcatttgttatcggtgcactaggctgtgctgcaatccacaagtttttgtcatttgtcagaaggtctcagcaacaggggcaaggaaatgatcagccttctcggttaccagaaggcggcagtcaagcttag
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| Protein seq | MEPDADDNKQQPGGGGKATVASHPKSREWQLRKYLLLLAILVATVTYIAGLDPPGGVWLETTDEHLTGDPILPDTRRLRYDLFYYFNATAFVASLVLTILLLPFRVEGPRLMAVRGVMVVDLLCLMVAYIAGSCRGRLTTIFASVLSATIFVYIVVHALVAPSTDTPEKKTVHDSPDKEKAMDMEDGHLHGCSSNPLDMKEAVEDGKLRPKERRKVLMLLSIFMVTITYTAGLSPPGGTWEHAAEEGGAAAAAGGHHRAGDPVLQEGHYWRFVAFFVLNTVAFVASLTVIMLLLSTRMGNNGRRLSALNVAIAFALLGLMGAYASGSCRETETTVYVLCLIGAVLLYISCLAAGLDPPGGVWRDDDNGHSGGGLILPATHAKRYKVFFYCNSAAFVASIIVIIMVQSRSLIGRRALEAAVILDLFGLIGAYSAGSCRDVRTSIYVFSLAVAIFVLVVAIYVVISKLPHDKKGKLEEKSKLEKKQKLLLLLAILAVTITYQAGLTPPGGFWIEHTDEDHRFGDSILADNYPLRYKAFFYCNATSFMASVIAIVCLMSWNLSSIAVGYCNALYACMAAGLVGLMGAYAAGTTRRLRTSIYVFALVGAVLIFAALHIKFFHKILIGCLSFFSSKKQDEVTKNHDQATGSKGSTGKKCTNNHDEETTDEYKEKYKMRKYLTLLGILAASVTYQAGLVPPGSVWPTNDGKGHAAGNPILGDTDGRRYHAFFYSNSTSFAASIVAIVLLLQGTLILPELNDPDRFGPMHMVVVLDLLGLLVAYAAGSSRDWGTSGYVVAMAVMVLAYVAIYVFLSLRDRKGSEGRATTEVRSSSSTSQSSRSTLEVARPASRSSGSADNHLISIDPFTTWSTSFLLLSLLQMENSEQERTDSPLEYDLRKYLLLLATLVATVTYGAGFSPPGGVWQDTEAGHLAGDSIIRDSQYRRYLMFFYCNATAFALSIVVIILIFILAILHEKGKLQIPMLPLRAAMVLDLLSLMGAYAAGTSRGVLTAGNVSALVATFIYMVAQMVVTLWLDKKQTQDISSGDEKKKRHRKVLMLLATFVASITYMAGLSAPGGYWDNNQEGHHPGDPVLWEHHSRRLRAFFVCNTIAFVASLLIIMLLLDKKQRIFLPLDKIKITITVRTYVLYAYITIALLGLVGAYVAGSCRKPDTTIYVLSLVGAVLLCIGALQAVLFFLPQLSNISCLPIIAKLSCSPGGPSDSSSRKNTSSKTDILEKAQSLVVLLATLVATVTYQAGLVPPGGVWQKNQDGHMAGEPILLSTQAKRYKVFFYCNSTAFAASLVVIVLVRYKPLLRRRILEITMILDLFGLMGAYAAGSCRDITTSVYIIALAGGVLVYVVIHVVFFTLEDNDKEKEVGNTNSVRNGSVVRTQNNSAEGNLAEKDSCIDKRRKRLLLFAVLGATLTYQAGLTPPGGFRVVDDGFGRHAGDPILFYNFPRRYKAFLYCNSVSFMSSLSLIILLVNPNLYRPAIQSYALSVCTAAGLFALLGAYAAGSTQHLKTSIYVFVLVAVVLFIMIILLVCFYQSESKEKRDDISKEPVEKDKDRAKYHAKRKYLMLLGVLAASVTYQAGLNPPGGVWQGNSDGHGVGHSVMHDNKRYRYLTFFYSNSTSFVASIVVIILLLPTELLKKNRWLRVMNITIVLDLLGLLLAYVAGSSMRWEPSGYVIAFVIGALGCAAIHKFLSFVRRSQQQGQGNDQPSRLPEGGSQA |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_06g0012080 | OsLaMu_06g0012080.01 | Chr06 | 11284796 | 11298084 | - | NAM | ||
| CDS seq | atggagcccgacgccgacgacaacaagcagcagccgggtggtggtgggaaggcgacggtggcgagccaccccaaatcgcgggagtggcagctgcgcaagtacctcctgctgctcgccatcctggtggcgactgtgacctacatcgcggggctcgacccgccggggggcgtctggctggagaccacggacgaacacctcaccggcgaccccatcctgccggacacccgccgcctccggtacgacctgttctactacttcaacgcgacggcgttcgtggcgtcgctcgtgctcaccatcctcctcctcccgttccgcgtggaggggccccggctcatggcggtgcgaggggtcatggtggtcgatctgctctgcctcatggtggcctacatcgccgggagctgccggggcaggctcaccaccatcttcgcctcggtgctttcggcaaccatcttcgtctacatcgtggttcatgcgctggtcgccccttctaccgacacgcctgagaagaagacagtgcacgactcacctgacaaggagaaggccatggacatggaggatggccatctccatggttgctcaagtaacccgcttgacatgaaggaggccgtggaggatggcaagctccgccccaaagagcggcgcaaggtcttgatgctgctctccatcttcatggtgacgatcacgtacacggcaggtttgagccctccgggtggcacatgggagcatgctgccgaggagggtggcgccgccgccgccgccggtggccaccaccgcgccggtgaccccgtcctgcaggagggccactactggcgcttcgtggcgttcttcgtcttgaacaccgtcgcgttcgtcgcgtcgctcactgtcatcatgttgctcctgagcaccagaatgggcaacaacgggagaaggctatcggcgctgaacgtggccatcgccttcgcgctgcttggtctcatgggcgcctacgcatccggcagctgcagggagacggagaccaccgtgtacgtcctctgcctgatcggcgctgtcctcctatacatttcttgccttgctgccggcctagacccgcccggtggagtctggagagacgacgacaatggccatagtggtgggggcttgatactccccgcaacccatgctaagcggtacaaggtgttcttttattgcaactcagctgccttcgtagcatccatcatcgtcatcatcatggtccagagtaggtctctgatcggccggcgtgcactcgaggcagctgtgatactcgacctctttggcctgatcggcgcatactctgctgggagctgccgagacgtgcgcacctccatctatgtcttttcattggctgtggccatctttgtgttggtggtggcaatctacgttgtgattagcaagcttccacatgacaaaaagggtaagttggaggagaaaagcaagctggagaagaagcagaaactattgctgcttcttgcaattctagccgtcaccatcacctaccaagctgggttgaccccgccaggaggcttctggatcgagcacaccgatgaagaccaccgcttcggtgactcgattctcgcggacaattaccctctccgatacaaggcattcttctattgcaacgcgacgagcttcatggcatctgtcattgccatagtttgcttgatgagttggaacctctccagcatcgccgtaggctactgcaacgcactctatgcctgcatggctgcaggcttggtcggattgatgggtgcctacgctgccggaaccacccgaaggctgcggacgtccatctacgtcttcgccttggtcggcgcggtgcttattttcgccgctctacacatcaaatttttccataaaatactcattggttgtctttccttcttctcttccaagaagcaagacgaggtcactaagaatcatgatcaggcaacggggtctaaaggttcgacaggaaagaagtgcaccaataatcatgatgaagagaccactgatgagtacaaagagaagtacaagatgcgcaagtatctgacgctactggggatcctggcagcgagcgtcacgtaccaggccggcctagtgccgccagggagcgtgtggccgacgaacgacggcaaggggcacgcagcggggaaccccatcctgggggacaccgacggccgccggtaccacgccttcttctacagcaactccacatccttcgcggcatccatcgtggccatcgttctcctcctgcaagggaccttgatcctcccagagctcaatgaccctgaccggttcgggccaatgcacatggtggtcgtgctcgacctgctcggcctactggtggcgtacgcggcaggcagcagcagggactggggcacctccgggtacgtcgtcgccatggccgtcatggtgctggcttatgtagccatctatgtgttcctgtctctccgtgacaggaagggatcggagggcagggcaacgacggaggtacgtagctcctcctcgacctcgcagtcgtctagatcgacgctggaagtagctcgaccggcctcacggtcatcaggatcagctgacaaccaccttattagcattgatccattcacaacttggagtacctcctttctgcttctatctctcctgcaaatggagaatagcgagcaagagaggacggactcaccattggagtatgatttgaggaagtacctccttctgttggccacccttgtggccacggtgacatatggtgcaggattcagcccgccggggggtgtctggcaggacaccgaggccgggcacctcgctggtgactccatcatccgggatagccagtatcgccgataccttatgttcttctactgcaacgcgactgcattcgcgctgtccatcgtggtcatcatcctcatcttcatccttgctatcctgcatgagaaggggaagttacagatccccatgcttccactgcgagcagccatggtgctggacctgctaagcctcatgggggcctatgctgcagggaccagtcggggtgttctcacagccggcaacgtctctgcacttgtggctactttcatctatatggtggcacagatggtggtaactttatggcttgacaagaaacagactcaggatataagctcaggtgatgagaagaaaaaacggcaccgcaaggtactgatgcttctcgcaacatttgtggcaagcatcacatacatggctgggctgagcgcaccgggtggctactgggataacaaccaggagggccaccatccaggcgatcccgtcctgtgggaacaccactctcgccgtctgagggcgttctttgtctgcaacacaattgcatttgtcgcatccctgctcatcatcatgctgcttctggacaagaagcagcggatcttcttacccCtcgacaagataaagatcaccatcaccgtacggacttatgtgctctacgcgtacatcaccattgctcttttaggccttgtgggggcctatgtggctggcagctgcagaaagcctgacactaccatctatgtactcagtctggttggtgctgttcttttatgcataggcgccctccaggcagtcctattttttctgccacaactttcaaacatatcctgcttgccaataattgcaaagttatcatgttcaccgggagggccatcagatagcagttccagaaagaatacaagcagtaagacagatattctggagaaggcccaatctcttgttgtactgcttgccactcttgtggcaactgttacttaccaagcagggctagtcccaccaggtggtgtctggcagaaaaaccaagatgggcacatggctggcgaaccaatactcttatccacacaagccaaacgttacaaggtgttcttttactgtaactcgacagcctttgcagcatcattggttgtcatagttttggtccggtataaacctttgctcaggcgccgcattctagagataactatgattttggatctgtttggtctcatgggtgcatatgctgctggaagctgccgggacataaccacatcagtttacatcattgccttggcaggcggtgttctagtctatgtggtgattcatgttgtgttcttcacgcttgaagacaatgacaaggagaaggaagttgggaacacgaattctgtacgaaatggttcagttgtgcgcacccaaaataattcagctgagggcaatcttgctgagaaagattcatgtattgacaaaaggcgcaagaggttgctccttttcgctgttttgggcgcgaccctcacttatcaagctgggttgaccccaccaggtgggttcagagttgtggatgatggttttgggcgccatgctggtgatccaatactcttttacaactttccacgccgttacaaggcatttctctattgtaactcggtaagcttcatgtcatctctttccctcatcatactcctcgtgaacccaaatctgtataggccagctatacaaagctatgctctttcggtttgcactgcagcaggcttgtttgctcttctgggagcctatgctgccggaagcactcaacatttgaaaacatccatttatgtctttgtgttggtagctgtggtgcttttcattatgatcatactcctggtgtgtttctatcaaagtgagagcaaagagaagcgagatgacatatccaaggagcccgttgagaaagacaaggacagagccaaataccatgccaagcgcaagtacttgatgttgctaggggtcctggctgcaagtgttacttaccaggctggtctgaacccacctggcggtgtgtggcagggtaatagtgacgggcatggtgtgggtcactcggttatgcatgacaataagaggtatcgctacctcaccttcttctacagcaactcaacttcttttgtggcatctattgttgttatcatcctattgctaccgacggaactgctaaagaagaacaggtggctaagggtgatgaatattacaattgtgctggacttgctcggcctactgctagcctacgtggctgggtcgagcatgagatgggaaccttctggatatgtcattgcatttgttatcggtgcactaggctgtgctgcaatccacaagtttttgtcatttgtcagaaggtctcagcaacaggggcaaggaaatgatcagccttctcggttaccagaaggcggcagtcaagcttag
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| Protein seq | MEPDADDNKQQPGGGGKATVASHPKSREWQLRKYLLLLAILVATVTYIAGLDPPGGVWLETTDEHLTGDPILPDTRRLRYDLFYYFNATAFVASLVLTILLLPFRVEGPRLMAVRGVMVVDLLCLMVAYIAGSCRGRLTTIFASVLSATIFVYIVVHALVAPSTDTPEKKTVHDSPDKEKAMDMEDGHLHGCSSNPLDMKEAVEDGKLRPKERRKVLMLLSIFMVTITYTAGLSPPGGTWEHAAEEGGAAAAAGGHHRAGDPVLQEGHYWRFVAFFVLNTVAFVASLTVIMLLLSTRMGNNGRRLSALNVAIAFALLGLMGAYASGSCRETETTVYVLCLIGAVLLYISCLAAGLDPPGGVWRDDDNGHSGGGLILPATHAKRYKVFFYCNSAAFVASIIVIIMVQSRSLIGRRALEAAVILDLFGLIGAYSAGSCRDVRTSIYVFSLAVAIFVLVVAIYVVISKLPHDKKGKLEEKSKLEKKQKLLLLLAILAVTITYQAGLTPPGGFWIEHTDEDHRFGDSILADNYPLRYKAFFYCNATSFMASVIAIVCLMSWNLSSIAVGYCNALYACMAAGLVGLMGAYAAGTTRRLRTSIYVFALVGAVLIFAALHIKFFHKILIGCLSFFSSKKQDEVTKNHDQATGSKGSTGKKCTNNHDEETTDEYKEKYKMRKYLTLLGILAASVTYQAGLVPPGSVWPTNDGKGHAAGNPILGDTDGRRYHAFFYSNSTSFAASIVAIVLLLQGTLILPELNDPDRFGPMHMVVVLDLLGLLVAYAAGSSRDWGTSGYVVAMAVMVLAYVAIYVFLSLRDRKGSEGRATTEVRSSSSTSQSSRSTLEVARPASRSSGSADNHLISIDPFTTWSTSFLLLSLLQMENSEQERTDSPLEYDLRKYLLLLATLVATVTYGAGFSPPGGVWQDTEAGHLAGDSIIRDSQYRRYLMFFYCNATAFALSIVVIILIFILAILHEKGKLQIPMLPLRAAMVLDLLSLMGAYAAGTSRGVLTAGNVSALVATFIYMVAQMVVTLWLDKKQTQDISSGDEKKKRHRKVLMLLATFVASITYMAGLSAPGGYWDNNQEGHHPGDPVLWEHHSRRLRAFFVCNTIAFVASLLIIMLLLDKKQRIFLPLDKIKITITVRTYVLYAYITIALLGLVGAYVAGSCRKPDTTIYVLSLVGAVLLCIGALQAVLFFLPQLSNISCLPIIAKLSCSPGGPSDSSSRKNTSSKTDILEKAQSLVVLLATLVATVTYQAGLVPPGGVWQKNQDGHMAGEPILLSTQAKRYKVFFYCNSTAFAASLVVIVLVRYKPLLRRRILEITMILDLFGLMGAYAAGSCRDITTSVYIIALAGGVLVYVVIHVVFFTLEDNDKEKEVGNTNSVRNGSVVRTQNNSAEGNLAEKDSCIDKRRKRLLLFAVLGATLTYQAGLTPPGGFRVVDDGFGRHAGDPILFYNFPRRYKAFLYCNSVSFMSSLSLIILLVNPNLYRPAIQSYALSVCTAAGLFALLGAYAAGSTQHLKTSIYVFVLVAVVLFIMIILLVCFYQSESKEKRDDISKEPVEKDKDRAKYHAKRKYLMLLGVLAASVTYQAGLNPPGGVWQGNSDGHGVGHSVMHDNKRYRYLTFFYSNSTSFVASIVVIILLLPTELLKKNRWLRVMNITIVLDLLGLLLAYVAGSSMRWEPSGYVIAFVIGALGCAAIHKFLSFVRRSQQQGQGNDQPSRLPEGGSQA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.260799 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0296700 | RBH | 0.345541 | 0.431254 | 0.632676 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g17700 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0296900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0011680 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0012080 | RBH | 0.0 | 0.000000 | 0.172909 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0012100 | RBH | 0.0 | 1.216275 | 0.904599 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0011610 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0012280 | RBH | 0.0 | 1.317722 | 0.793076 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0179300 | RBH | 0.397658 | 1.959379 | 0.545664 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0011750 | RBH | 0.036395 | 0.208633 | 0.023179 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0175000 | RBH | 0.5291795 | 6.2620295 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0011710 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0011560 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0011990 | RBH | 0.000000 | 2.408634 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0012420 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0023870 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G011400 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0011710 | SBH | 0.0 | 0.0 | 0.0 |
