Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsLaMu_11g0023870 OGI:11081220 | 13/16 LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) Chr11:30841966-30843140
Gene Symbol -
DNA seq

tcaattgaccaccacctccttgacctcctctcccaccccacaacgccacctcggacccgccaacatgtgccacattgtctctgcagctcttagctagtacttcttgtttcataataatagtttacaaacataggaaaataatacttttatcaaactgtatttcaagatcattttcaaacatagaaaaataatactcatatcattttcaaATattgatacccaatacataaacataacatgtaaccaaagtttgaaatgaattatcgacttaaggcaactccataaattccatttatttgtgacttggtagtacaaggattcttcAttattgacatacatacccatgaaatataccatttacagtatggggagatctatagacgactcgatatgtgactttggctccatatAataacatctagaaagtcttttattcagttttctcttacagaccaaCaaagaatacatatgggagcaaacaactcgacatctcaacacacaccttggactccaacttcagaaagcttaaatcaagcaaaagcagctattgtatataTtcttgaaaatatggacctgtgtaattaatccgccgctatataagaacgtcatatgagacattcgacactagatcagttttaagcatgttcagggccagacttgatagtaggattctatttggagccattatgtttttcttcacctcctttcttccagaagaaaagaataacaacaaagcccaacacaggtaagagaagcaggatggcatccttgaatgtgcaccaattccgagtactgcctgCcgcgtaggctcccaggagggcaagcatgtcCAGcaacatggctgtgtgcattggccaaagaggcaatttaTGTtcatcacccttggtcatccttcgaagcagcaaaacaatgacagtgatggatgccatgaaggaagtggagttgctatagaaaaaagcattgtaccgacgcttgtcgatgtcgtagaggACCgggttgccagcagagtgcccattaccttcatccctccacaagCcaccaggtggttttaggcccatgaggtaggccacactcgcagccaatattcctgctagcattaagtacttggccatcatgtcggctttctttttcatgtcagcttcctgttgatcttgtgtttgtcttggtgtgtccat

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CDS seq

atggacacaccaagacaaacacaagatcaacaggaagctgacatgaaaaagaaagccgacatgatggccaagtacttaatgctagcaggaatattggctgcgagtgtggcctacctcatgggcctaaaaccacctggtgGcttgtggagggatgaaggtaatgggcactctgctggcaacccGGTcctctacgacatcgacaagcgtcggtacaatgcttttttctatagcaactccacttccttcatggcatccatcactgtcattgttttgctgcttcgaaggatgaccaagggtgatgaACAtaaattgcctctttggccaatgcacacagccatgttgCTGgacatgcttgccctcctgggagcctacgcgGcaggcaagacaatgtggcacatgttggcgggtccgaggtggcgttgtggggtgggagaggaggtcaaggaggtggtggtcaattga

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Protein seq

MDTPRQTQDQQEADMKKKADMMAKYLMLAGILAASVAYLMGLKPPGGLWRDEGNGHSAGNPVLYDIDKRRYNAFFYSNSTSFMASITVIVLLLRRMTKGDEHKLPLWPMHTAMLLDMLALLGAYAAGKTMWHMLAGPRWRCGVGEEVKEVVVN

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsLaMu_11g0023870 OsLaMu_11g0023870.01 Chr11 30841966 30843140 - NAM
CDS seq

atggacacaccaagacaaacacaagatcaacaggaagctgacatgaaaaagaaagccgacatgatggccaagtacttaatgctagcaggaatattggctgcgagtgtggcctacctcatgggcctaaaaccacctggtgGcttgtggagggatgaaggtaatgggcactctgctggcaacccGGTcctctacgacatcgacaagcgtcggtacaatgcttttttctatagcaactccacttccttcatggcatccatcactgtcattgttttgctgcttcgaaggatgaccaagggtgatgaACAtaaattgcctctttggccaatgcacacagccatgttgCTGgacatgcttgccctcctgggagcctacgcgGcaggcaagacaatgtggcacatgttggcgggtccgaggtggcgttgtggggtgggagaggaggtcaaggaggtggtggtcaattga

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Protein seq

MDTPRQTQDQQEADMKKKADMMAKYLMLAGILAASVAYLMGLKPPGGLWRDEGNGHSAGNPVLYDIDKRRYNAFFYSNSTSFMASITVIVLLLRRMTKGDEHKLPLWPMHTAMLLDMLALLGAYAAGKTMWHMLAGPRWRCGVGEEVKEVVVN

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_11g0682000 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os11g45580 SBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os11g0682000 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_11g0024170 RBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_11g0024120 RBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_11g0023670 RBH 0.0 0.0 0.000000
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_11g0023520 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_11g0023980 RBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_06G0176900 SBH 4.1231745 0.305001 0.0181225
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_11g0024340 RBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_06G0172500 SBH 5.147779 0.1347395 0.460024
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_11g0024200 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_11g0024230 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_11g0023640 SBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_11g0023470 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_06g0011880 SBH 0.694646 1.647784 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_11G023880 RBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_06g0012250 SBH 0.0 0.0 0.618128
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Huazhong Agricultural University

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