Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_01g0023430 | OGI:01013090 | 16/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr01:25069482-25070597 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | tcagtttgtgaacaaactcttggacagaggaggaccgcaaagacccgggttaccaatatagattgatggctggtcatcgagtgttcgtagttgattcccagatggtatctttcctgaaagattgttgtaggacaagttcaagtgactcaaagatgcgagagcagataagctgttaggaatttcaccagacaaatcgttgtgtgataggtcgagagactccacctgcaacaaggcgccaatcttatcaggaatattcccactgaaggcattccaagataagtttagattcttcaatgcaacaagagtaccaatctcttcagggatctttccaatgatattgttacaagataagtcaaggttcaccatatatacgatttctcttgtatacaactgctcttgaccctttgtgactaccttgaaactatcgttaaacccgtccattatttcagcaccaccatatgacatactagtagaaaagaatggcgaataaattccgccatcattacccctcgttattaccatccctttgaagttcacaaaaaattccggcaagctccctgatatattattgtaagcaagatccaaatattgcagattaactagtttcgtaagttcgattgggatatgaccatagaacatattagatcgcaaccgtaaaaatgccaaagatggtagcttctctccaatccataccggcaaaggaccagataattgattgtttgcaagatcaagaaatatgagttgttggcagttctggagaaatgaaggaaatttgccagagagcttgtttcccaagcttagattaacaatattcagacttgtgtttttagttgatgtattgaaagaacaatctggatttgacccagttagcttatttcctgatatatctaccagccataggaattggaattcgcacaacgatggaatggtgccagagatgtagttgtcaaatagaagaagtgtttcaaggcccggtgctccaaaatctgctggtaatggtccagataaatggtttctactgagatccaaaccagttagattaatgggaagcttaggtattggaccacttaactggttagaactgagatccattgctagtgcagccataaattccat
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| CDS seq | atggaatttatggctgcactagcaatggatctcagttctaaccagttaagtggtccaatacctaagcttcccattaatctaactggtttggatctcagtagaaaccatttatctggaccattaccagcagattttggagcaccgggccttgaaacacttcttctatttgacaactacatctctggcaccattccatcgttgtgcgaattccaattcctatggctggtagatatatcaggaaataagctaactgggtcaaatccagattgttctttcaatacatcaactaaaaacacaagtctgaatattgttaatctaagcttgggaaacaagctctctggcaaatttccttcatttctccagaactgccaacaactcatatttcttgatcttgcaaacaatcaattatctggtcctttgccggtatggattggagagaagctaccatctttggcatttttacggttgcgatctaatatgttctatggtcatatcccaatcgaacttacgaaactagttaatctgcaatatttggatcttgcttacaataatatatcagggagcttgccggaattttttgtgaacttcaaagggatggtaataacgaggggtaatgatggcggaatttattcgccattcttttctactagtatgtcatatggtggtgctgaaataatggacgggtttaacgatagtttcaaggtagtcacaaagggtcaagagcagttgtatacaagagaaatcgtatatatggtgaaccttgacttatcttgtaacaatatcattggaaagatccctgaagagattggtactcttgttgcattgaagaatctaaacttatcttggaatgccttcagtgggaatattcctgataagattggcgccttgttgcaggtggagtctctcgacctatcacacaacgatttgtctggtgaaattcctaacagcttatctgctctcgcatctttgagtcacttgaacttgtcctacaacaatctttcaggaaagataccatctgggaatcaactacgaacactcgatgaccagccatcaatctatattggtaacccgggtctttgcggtcctcctctgtccaagagtttgttcacaaactga
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| Protein seq | MEFMAALAMDLSSNQLSGPIPKLPINLTGLDLSRNHLSGPLPADFGAPGLETLLLFDNYISGTIPSLCEFQFLWLVDISGNKLTGSNPDCSFNTSTKNTSLNIVNLSLGNKLSGKFPSFLQNCQQLIFLDLANNQLSGPLPVWIGEKLPSLAFLRLRSNMFYGHIPIELTKLVNLQYLDLAYNNISGSLPEFFVNFKGMVITRGNDGGIYSPFFSTSMSYGGAEIMDGFNDSFKVVTKGQEQLYTREIVYMVNLDLSCNNIIGKIPEEIGTLVALKNLNLSWNAFSGNIPDKIGALLQVESLDLSHNDLSGEIPNSLSALASLSHLNLSYNNLSGKIPSGNQLRTLDDQPSIYIGNPGLCGPPLSKSLFTN |
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| Function | Receptor-like protein EIX1 [UniProtKB/Swiss-Prot:Q6JN47] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_01g0023430 | OsLaMu_01g0023430.01 | Chr01 | 25069482 | 25070597 | - | NAM | ||
| CDS seq | atggaatttatggctgcactagcaatggatctcagttctaaccagttaagtggtccaatacctaagcttcccattaatctaactggtttggatctcagtagaaaccatttatctggaccattaccagcagattttggagcaccgggccttgaaacacttcttctatttgacaactacatctctggcaccattccatcgttgtgcgaattccaattcctatggctggtagatatatcaggaaataagctaactgggtcaaatccagattgttctttcaatacatcaactaaaaacacaagtctgaatattgttaatctaagcttgggaaacaagctctctggcaaatttccttcatttctccagaactgccaacaactcatatttcttgatcttgcaaacaatcaattatctggtcctttgccggtatggattggagagaagctaccatctttggcatttttacggttgcgatctaatatgttctatggtcatatcccaatcgaacttacgaaactagttaatctgcaatatttggatcttgcttacaataatatatcagggagcttgccggaattttttgtgaacttcaaagggatggtaataacgaggggtaatgatggcggaatttattcgccattcttttctactagtatgtcatatggtggtgctgaaataatggacgggtttaacgatagtttcaaggtagtcacaaagggtcaagagcagttgtatacaagagaaatcgtatatatggtgaaccttgacttatcttgtaacaatatcattggaaagatccctgaagagattggtactcttgttgcattgaagaatctaaacttatcttggaatgccttcagtgggaatattcctgataagattggcgccttgttgcaggtggagtctctcgacctatcacacaacgatttgtctggtgaaattcctaacagcttatctgctctcgcatctttgagtcacttgaacttgtcctacaacaatctttcaggaaagataccatctgggaatcaactacgaacactcgatgaccagccatcaatctatattggtaacccgggtctttgcggtcctcctctgtccaagagtttgttcacaaactga
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| Protein seq | MEFMAALAMDLSSNQLSGPIPKLPINLTGLDLSRNHLSGPLPADFGAPGLETLLLFDNYISGTIPSLCEFQFLWLVDISGNKLTGSNPDCSFNTSTKNTSLNIVNLSLGNKLSGKFPSFLQNCQQLIFLDLANNQLSGPLPVWIGEKLPSLAFLRLRSNMFYGHIPIELTKLVNLQYLDLAYNNISGSLPEFFVNFKGMVITRGNDGGIYSPFFSTSMSYGGAEIMDGFNDSFKVVTKGQEQLYTREIVYMVNLDLSCNNIIGKIPEEIGTLVALKNLNLSWNAFSGNIPDKIGALLQVESLDLSHNDLSGEIPNSLSALASLSHLNLSYNNLSGKIPSGNQLRTLDDQPSIYIGNPGLCGPPLSKSLFTN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0601675 | SBH | 0.227110 | 0.0 | 0.185028 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g41770 | SBH | 0.102326 | 0.0 | 0.047600 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0601675 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0024280 | SBH | 0.000000 | 0.0 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0023930 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0024190 | SBH | 0.0 | 0.885465 | 0.211562 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0023540 | SBH | 0.025093 | 0.039633 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0023300 | RBH | 0.352614 | 0.000000 | 0.306255 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0396000 | SBH | 0.584431 | 1.7730925 | 1.748666 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0023280 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0385300 | SBH | 5.83854 | 4.3827855 | 1.476269 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0023290 | RBH | 0.031254 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0023260 | RBH | 0.085755 | 1.744840 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0023510 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0023520 | RBH | 0.064851 | 0.035976 | 0.053111 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0023370 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G023570 | SBH | 0.038315 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0023280 | RBH | 0.000000 | 0.449103 | 0.089174 |
