Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsKeNa_12g0014630 | OGI:12069410 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr12:19058588-19058933 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | ttagtcaggcactactacagcagaatagcagatagcaatatggagacagtacacccaagcatctgcttcagatgcccttaacttctcatctgctctggcaatagttgcttcttgtaccactgcttgctctctagctttccctagctcagtgcgccacatatgagcctcctgaagtgcagcatctctttctttcagcaattgatccttctctttgctcaatctaattaccttttcttcagactgtcatagcagtaatatccatagaccatttggagcatgagaattcagagcattcaaaattcagatattaaataaaactatttaccttgagcatggattgttccat |
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CDS seq | atggaacaatccatgctcaagtctgaagaaaaggtaattagattgagcaaagagaaggatcaattgctgaaagaaagagatgctgcacttcaggaggctcatatgtggcgcactgagctagggaaagctagagagcaagcagtggtacaagaagcaactattgccagagcagatgagaagttaagggcatctgaagcagatgcttgggtgtactgtctccatattgctatctgctattctgctgtagtagtgcctgactaa |
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Protein seq | MEQSMLKSEEKVIRLSKEKDQLLKERDAALQEAHMWRTELGKAREQAVVQEATIARADEKLRASEADAWVYCLHIAICYSAVVVPD |
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Function | - |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsKeNa_12g0014630 | OsKeNa_12g0014630.01 | Chr12 | 19058588 | 19058933 | - | NAM | ||
CDS seq | atggaacaatccatgctcaagtctgaagaaaaggtaattagattgagcaaagagaaggatcaattgctgaaagaaagagatgctgcacttcaggaggctcatatgtggcgcactgagctagggaaagctagagagcaagcagtggtacaagaagcaactattgccagagcagatgagaagttaagggcatctgaagcagatgcttgggtgtactgtctccatattgctatctgctattctgctgtagtagtgcctgactaa
More
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Protein seq | MEQSMLKSEEKVIRLSKEKDQLLKERDAALQEAHMWRTELGKAREQAVVQEATIARADEKLRASEADAWVYCLHIAICYSAVVVPD |
Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.0 | 0.0 | 0.0 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0505950 | RBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g03800 | SBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | RAP-db | Os12g0505950 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0014460 | RBH | 0.0 | 0.0 | 0.0 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0002150 | RBH | 0.0 | 0.0 | 0.0 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0014520 | RBH | 0.0 | 0.0 | 0.0 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0014320 | RBH | 0.0 | 0.0 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0000890 | RBH | 0.0 | 0.0 | 0.0 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0368900 | RBH | 4.199932 | 17.780379 | 12.4195015 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0008310 | RBH | 0.0 | 0.0 | 0.0 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0287300 | RBH | 0.45946 | 0.213316 | 0.2996655 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0014240 | SBH | 0.0 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0014420 | SBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0014400 | SBH | 0.0 | 0.0 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0014300 | RBH | 0.0 | 0.0 | 0.0 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0014460 | RBH | 0.0 | 0.0 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G014310 | RBH | 0.0 | 0.0 | 0.000000 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0014100 | RBH | 0.0 | 0.0 | 0.0 |