Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_11g0023470 | OGI:11077650 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr11:28345809-28351081 | ||||||||
| Gene Symbol | YR2, YR6, YR9, YR10, YR21, YR23, Osh359-2 | ||||||||||
| DNA seq | atgaatgaaaaatttgagttcctcgccagtccagatatagacaccagtgccctcgacaagtgaccctgatcttatcatccacacgatgccctcgccaagtcaccatgatatcatcatccaagatgaataggaactttgcacaccaaccgaataggggtagagggatcactgcactatatgaaatttacagtggttagtaccgaatatgattttatgaaataattgccttcctccgttcattttagtatgttaattagtattgttttacagttgttagtattgtttgctgttaattagttagtcttattctcaccagtcctatatacaattatgtaattgtaaaagatgcaccattctttagttgtagtcccattttaagagtagatacactacactaaacagaaaaaaaaacatacttctatgaatacctcacatgataagaatgtagtaatagtttttagtgttggttatgtacctcatactgtgcatgagcccaacattgttggcaaggagatcatacatgcctgcagaaaaatggtagatttagtgcttgaacataaggggagaaaactttataagcttgcaattgttgggactgggggagttggtaagacaacattagctcagaaaatatacaatgatagaaaaataaaaggaagtttcaacaaaaaagcctgggtttgtgtttctaaagtgtactctgaagcttctcttttgagagaacttcttcgaattatggaagttcatcatgatcaagatgaatcaattggagagctccagagcaagcttgaaatagcaattaaggagacaaattttttacttgtgttggatgacatgtggcaatctgacgcatgggaaaatttattaagaattccattgcatgctgctgaaacgggaacaattctcataacaactagaaataatattgttgccttagaaattggagtggaccatacttatcgagttgatttgatgtcaaccgatgtaggatgggagctattttagaagagcatgaatatcagtgaaagcatagaattgcaaactctgcaggatgttgggattgagattgtttgcaaatgtggttgccttcctcttgcaattaaggttattgctagagtgttagcgagtaaagaacaaacagagaatgaatggaaaaaaatattgagcaaaaatgcttggttcatgaacaagcttcctaatgatttgagaggtgctttatatctgagttacgatgagttaccacgtcatttgaagcaatgctttctttatatctgttatattggagatccaacatcattggaggataataacatgtgtaaactacgacgcattttagttatcaccgagaaagataaggttgtcatacctagcatgggtaaggaggagattaagttgagaactttgacaacccagcaaaatccactgggaatcgagaacacatttttcatgagatttatatatcttcgtgttttggatttgtctgacttacttgtggAaaaaataccagattgtgttggacatttaattcatctacgtttacttgatcttgatggaaccaacatatcctgtcttccagagtctattggtgctctaaaaaatctccagatgttacacttacagaggtgtggatctttgtacagtttgcccagctcgatcactcggttatgcaatttaaggcggcttggtcttgatgattcaccaataaatctggttccaagagggataggaagactggaattcctcaatgatttagaaggatttcctgttggtggtggaagtgacaatactaaaatgcaagatggatggaacttgcaggagttaactcatctttcacagttgcgccggcttgacttgaacaaattggaaagagcaactccttggagtagtacatattcattgttgctaactgacaaaaagcatctgaaaaaactaaatctatgctgcactgaaccgactgatgaagcatattcagaggaaggcattggcaatgttgagatgatctttgagcagctaactcctccacgcaatttagaagatcttatgattctatcattctttgggcgaaggttccccacctggtttggtactaaccacttgatttatgtgaaatccgtgatcctcacagattgcaaatcatgcgtgcaccttccaccaacagggcagctaccaaacttgaaatacctgaaaattaagggagcaagtgcaatcaccaagattggacctgagtttgttggctgctgggagggtaatctcagatccacagaggcagtcgctttccccaagcttgaagcattggtcatcaaggatatgcccaactgggaggagtggtcctttgttgaagaagaagaggtgcaggaggaggaagcatctgcagcagccaaggaagggggagaggatggaactgctgcttcgaagcaaaaggggaaagaagccccgtctccaactccgaggtcgtcgtggctgctgccttgtttgaaggagttgtatcttgaggagtgccccaagcttagacagcaggccaccaacttgaaggacctccaattaagagaagcagattgcttgaagaaggtggaagaccaccggttcctctgcttccttttagttgaaggatgtgaaggcctggagaggctctccaaccttccccaagtgagagacctgcgtgtaacacgttgcccaaccttgtggggaaagaaatagtgcatgcttgtagaaagttggtgagcctggtggttgcacacaaggaagacaaggcctacaagctcgctattgttggaacagggggaattggaaagacaacactagctcagaaagtattcaatgatcagaaattaaaaggaaccttcaacaaacatgcttggatttgtgtttctcaggactacaccccagtctctgttttgaaacaactacttagaacaatggaggttcaacatgcacaagaagaatcagctggagagctccaaagcaagcttgaattagctattaaagacaagagtttttttcttgtgttggatgatctatggcattccgatgtatggaccaatctactacgaactccattgcatgctgcaacctcaggaataattttgataactactaggcaagatattgtcgctagggaaataggggttgaggaagcacatcgtgttgacctaatgtcaccagctgttggttgggagctactttggaagagcatgaacattcaggacgagaaagaagtgcaaaatctgcgagacatagggattgaggttgttcagaaatgtggtgggctacctcttgcaatcaaggttactgctcgagtattggcaagcaaagataaaacagagaacgaatggaaaaggattttagctaaaaacgtttggtccatggctaaactccctaaggaaataagtggtgcactatatctaagttatgatgatttaccactgcatttgaagcaatgttttctttattgtattgtatttcctgaagactggaccttgaaacgtgatgagcttatcatgatgtgggttgctgaaggctttgtagaagtgcacaaagatcaattactagaagatacagcagaagaatactactatgaactaataagtaagaatctcctgcaaccagtttacacatattttgatcagagcagatgcaaaatgcatgatctcttaaggcaacttgcttgttatctatcaagggaagaatgtcatattggagatctaaaaccattagtagacaatactatatgtaaactacgacgcatgttagttgtcggagagaaagacacggtggtcatacctttcactggtaaggaggaaattaagttgagaacttttacaactgatcatcagctacagggagttgataacacatttttcatgagattaactcatcttcgtgttttggatctaagtgactcacttgtgcaaacaataccagattatattggaaatttaatccatttacgtttgtttgatcttgatggaaccaacatatcttgtctcccagagtccattggttcccttcaaaaccttctcatattgaacttgaagaggtgtaaatatctgcacttccttcctttggcaacaactcaactgtacaatttgaggcggcttggtcttgctgatacaccaataaaccaagtcccaaaagggataggaagactgaaatttctcaatgatttagaaggatttccgatcggtggtggaagtgacaataccaaaatacaagatggctggaatttgaaagagttggctcatctttcacagttgaggtgtcttgatatgataaaattggagagagctactccttgcagcagtagagacccatttctactaacagagaaaaagcatctcaaagttctgaaactacactgcactgaacagacagatgaagcatattcagaggaaaatgctagaaacattgaaaagatcttcgagaagctaacacctccacacaacttagaagatctttttgttgggaatttctttggttgtagattccccacctggcttagtacttcccaattatcttcactgacatatttgaaactcacagattgcaaatcctgcttgcagcttccaccaatcggacagataccaaacttgaaatacctgaaaattaagggagcaagtgcaatcaccaagattggacccgaattcgttggctcctgggagggtaatctcacatccacagagacaattgctttccccaagcttgaattgttgatcatcgaggatatgcccaactgggaagagtggtcctttgttgaagaagaagaagaggtgcaggaggaggaagcagctgcagcagccaaggaagggggagaggatggaacttttgcttcgaagcaaaagggggaggaagccctgtttccaactccaaggtcgtcgtggctgctgccttgtttgacaaggttggaacttgacgactgccccaagctgagggctctcccaccacagcttggacagcaggccaccaacttgaagaagctctttataagatacacaagttgcttgaagatggtggaggacctcccattcctctctggtttccttcaagttaaaagatgtgaaggcctggagaggatctccaaccttccccaagtgagagagctgcgtgcaggtggttgccccaatttgaggtgtgttgaggagttgggcggtttggagcagctaaggctgtacaaggatatgcaggacatctcttcaccgtgggtctctatgcttcaagagcaacaccaccagctgaatggagatgagcatgtgctggaggtcaacgagtggctctga
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| CDS seq | atgaatatcagtgaaagcatagaattgcaaactctgcaggatgttgggattgagattgtttgcaaatgtggttgccttcctcttgcaattaaggttattgctagagtgttagcgagtaaagaacaaacagagaatgaatggaaaaaaatattgagcaaaaatgcttggttcatgaacaagcttcctaatgatttgagaggtgctttatatctgagttacgatgagttaccacgtcatttgaagcaatgctttctttatatctgttatattggagatccaacatcattggaggataataacatgtgtaaactacgacgcattttagttatcaccgagaaagataaggttgtcatacctagcatgggtaaggaggagattaagttgagaactttgacaacccagcaaaatccactgggaatcgagaacacatttttcatgagatttatatatcttcgtgttttggatttgtctgacttacttgtggAaaaaataccagattgtgttggacatttaattcatctacgtttacttgatcttgatggaaccaacatatcctgtcttccagagtctattggtgctctaaaaaatctccagatgttacacttacagaggtgtggatctttgtacagtttgcccagctcgatcactcggttatgcaatttaaggcggcttggtcttgatgattcaccaataaatctggttccaagagggataggaagactggaattcctcaatgatttagaaggatttcctgttggtggtggaagtgacaatactaaaatgcaagatggatggaacttgcaggagttaactcatctttcacagttgcgccggcttgacttgaacaaattggaaagagcaactccttggagtagtacatattcattgttgctaactgacaaaaagcatctgaaaaaactaaatctatgctgcactgaaccgactgatgaagcatattcagaggaaggcattggcaatgttgagatgatctttgagcagctaactcctccacgcaatttagaagatcttatgattctatcattctttgggcgaaggttccccacctggtttggtactaaccacttgatttatgtgaaatccgtgatcctcacagattgcaaatcatgcgtgcaccttccaccaacagggcagctaccaaacttgaaatacctgaaaattaagggagcaagtgcaatcaccaagattggacctgagtttgttggctgctgggagggtaatctcagatccacagaggcagtcgctttccccaagcttgaagcattggtcatcaaggatatgcccaactgggaggagtggtcctttgttgaagaagaagaggtgcaggaggaggaagcatctgcagcagccaaggaagggggagaggatggaactgctgcttcgaagcaaaaggggaaagaagccccgtctccaactccgaggtcgtcgtggctgctgccttgtttgaaggagttgtatcttgaggagtgccccaagcttagacagcaggccaccaacttgaaggacctccaattaagagaagcagattgcttgaagaaggtggaagaccaccggttcctctgcttccttttagttgaaggatgtgaaggcctggagaggctctccaaccttccccaagtgagagacctgcgtgtaacacgttgcccaaccttaaagttggtgagcctggtggttgcacacaaggaagacaaggcctacaagctcgctattgttggaacagggggaattggaaagacaacactagctcagaaagtattcaatgatcagaaattaaaaggaaccttcaacaaacatgcttggatttgtgtttctcaggactacaccccagtctctgttttgaaacaactacttagaacaatggaggttcaacatgcacaagaagaatcagctggagagctccaaagcaagcttgaattagctattaaagacaagagtttttttcttgtgttggatgatctatggcattccgatgtatggaccaatctactacgaactccattgcatgctgcaacctcaggaataattttgataactactaggcaagatattgtcgctagggaaataggggttgaggaagcacatcgtgttgacctaatgtcaccagctgttggttgggagctactttggaagagcatgaacattcaggacgagaaagaagtgcaaaatctgcgagacatagggattgaggttgttcagaaatgtggtgggctacctcttgcaatcaaggttactgctcgagtattggcaagcaaagataaaacagagaacgaatggaaaaggattttagctaaaaacgtttggtccatggctaaactccctaaggaaataagtggtgcactatatctaagttatgatgatttaccactgcatttgaagcaatgttttctttattgtattgtatttcctgaagactggaccttgaaacgtgatgagcttatcatgatgtgggttgctgaaggctttgtagaagtgcacaaagatcaattactagaagatacagcagaagaatactactatgaactaataagtaagaatctcctgcaaccagtttacacatattttgatcagagcagatgcaaaatgcatgatctcttaaggcaacttgcttgttatctatcaagggaagaatgtcatattggagatctaaaaccattagtagacaatactatatgtaaactacgacgcatgttagttgtcggagagaaagacacggtggtcatacctttcactggtaaggaggaaattaagttgagaacttttacaactgatcatcagctacagggagttgataacacatttttcatgagattaactcatcttcgtgttttggatctaagtgactcacttgtgcaaacaataccagattatattggaaatttaatccatttacgtttgtttgatcttgatggaaccaacatatcttgtctcccagagtccattggttcccttcaaaaccttctcatattgaacttgaagaggtgtaaatatctgcacttccttcctttggcaacaactcaactgtacaatttgaggcggcttggtcttgctgatacaccaataaaccaagtcccaaaagggataggaagactgaaatttctcaatgatttagaaggatttccgatcggtggtggaagtgacaataccaaaatacaagatggctggaatttgaaagagttggctcatctttcacagttgaggtgtcttgatatgataaaattggagagagctactccttgcagcagtagagacccatttctactaacagagaaaaagcatctcaaagttctgaaactacactgcactgaacagacagatgaagcatattcagaggaaaatgctagaaacattgaaaagatcttcgagaagctaacacctccacacaacttagaagatctttttgttgggaatttctttggttgtagattccccacctggcttagtacttcccaattatcttcactgacatatttgaaactcacagattgcaaatcctgcttgcagcttccaccaatcggacagataccaaacttgaaatacctgaaaattaagggagcaagtgcaatcaccaagattggacccgaattcgttggctcctgggagggtaatctcacatccacagagacaattgctttccccaagcttgaattgttgatcatcgaggatatgcccaactgggaagagtggtcctttgttgaagaagaagaagaggtgcaggaggaggaagcagctgcagcagccaaggaagggggagaggatggaacttttgcttcgaagcaaaagggggaggaagccctgtttccaactccaaggtcgtcgtggctgctgccttgtttgacaaggttggaacttgacgactgccccaagctgagggctctcccaccacagcttggacagcaggccaccaacttgaagaagctctttataagatacacaagttgcttgaagatggtggaggacctcccattcctctctggtttccttcaagttaaaagatgtgaaggcctggagaggatctccaaccttccccaagtgagagagctgcgtgcaggtggttgccccaatttgaggtgtgttgaggagttgggcggtttggagcagctaaggctgtacaaggatatgcaggacatctcttcaccgtgggtctctatgcttcaagagcaacaccaccagctgaatggagatgagcatgtgctggaggtcaacgagtggctctga
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| Protein seq | MNISESIELQTLQDVGIEIVCKCGCLPLAIKVIARVLASKEQTENEWKKILSKNAWFMNKLPNDLRGALYLSYDELPRHLKQCFLYICYIGDPTSLEDNNMCKLRRILVITEKDKVVIPSMGKEEIKLRTLTTQQNPLGIENTFFMRFIYLRVLDLSDLLVEKIPDCVGHLIHLRLLDLDGTNISCLPESIGALKNLQMLHLQRCGSLYSLPSSITRLCNLRRLGLDDSPINLVPRGIGRLEFLNDLEGFPVGGGSDNTKMQDGWNLQELTHLSQLRRLDLNKLERATPWSSTYSLLLTDKKHLKKLNLCCTEPTDEAYSEEGIGNVEMIFEQLTPPRNLEDLMILSFFGRRFPTWFGTNHLIYVKSVILTDCKSCVHLPPTGQLPNLKYLKIKGASAITKIGPEFVGCWEGNLRSTEAVAFPKLEALVIKDMPNWEEWSFVEEEEVQEEEASAAAKEGGEDGTAASKQKGKEAPSPTPRSSWLLPCLKELYLEECPKLRQQATNLKDLQLREADCLKKVEDHRFLCFLLVEGCEGLERLSNLPQVRDLRVTRCPTLKLVSLVVAHKEDKAYKLAIVGTGGIGKTTLAQKVFNDQKLKGTFNKHAWICVSQDYTPVSVLKQLLRTMEVQHAQEESAGELQSKLELAIKDKSFFLVLDDLWHSDVWTNLLRTPLHAATSGIILITTRQDIVAREIGVEEAHRVDLMSPAVGWELLWKSMNIQDEKEVQNLRDIGIEVVQKCGGLPLAIKVTARVLASKDKTENEWKRILAKNVWSMAKLPKEISGALYLSYDDLPLHLKQCFLYCIVFPEDWTLKRDELIMMWVAEGFVEVHKDQLLEDTAEEYYYELISKNLLQPVYTYFDQSRCKMHDLLRQLACYLSREECHIGDLKPLVDNTICKLRRMLVVGEKDTVVIPFTGKEEIKLRTFTTDHQLQGVDNTFFMRLTHLRVLDLSDSLVQTIPDYIGNLIHLRLFDLDGTNISCLPESIGSLQNLLILNLKRCKYLHFLPLATTQLYNLRRLGLADTPINQVPKGIGRLKFLNDLEGFPIGGGSDNTKIQDGWNLKELAHLSQLRCLDMIKLERATPCSSRDPFLLTEKKHLKVLKLHCTEQTDEAYSEENARNIEKIFEKLTPPHNLEDLFVGNFFGCRFPTWLSTSQLSSLTYLKLTDCKSCLQLPPIGQIPNLKYLKIKGASAITKIGPEFVGSWEGNLTSTETIAFPKLELLIIEDMPNWEEWSFVEEEEEVQEEEAAAAAKEGGEDGTFASKQKGEEALFPTPRSSWLLPCLTRLELDDCPKLRALPPQLGQQATNLKKLFIRYTSCLKMVEDLPFLSGFLQVKRCEGLERISNLPQVRELRAGGCPNLRCVEELGGLEQLRLYKDMQDISSPWVSMLQEQHHQLNGDEHVLEVNEWL |
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| Function | Putative disease resistance RPP13-like protein 1 [UniProtKB/Swiss-Prot:Q9LRR4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_11g0023470 | OsKeNa_11g0023470.02 | Chr11 | 28346820 | 28351081 | + | NAM | ||
| CDS seq | atgaatatcagtgaaagcatagaattgcaaactctgcaggatgttgggattgagattgtttgcaaatgtggttgccttcctcttgcaattaaggttattgctagagtgttagcgagtaaagaacaaacagagaatgaatggaaaaaaatattgagcaaaaatgcttggttcatgaacaagcttcctaatgatttgagaggtgctttatatctgagttacgatgagttaccacgtcatttgaagcaatgctttctttatatctgttatattggagatccaacatcattggaggataataacatgtgtaaactacgacgcattttagttatcaccgagaaagataaggttgtcatacctagcatgggtaaggaggagattaagttgagaactttgacaacccagcaaaatccactgggaatcgagaacacatttttcatgagatttatatatcttcgtgttttggatttgtctgacttacttgtggAaaaaataccagattgtgttggacatttaattcatctacgtttacttgatcttgatggaaccaacatatcctgtcttccagagtctattggtgctctaaaaaatctccagatgttacacttacagaggtgtggatctttgtacagtttgcccagctcgatcactcggttatgcaatttaaggcggcttggtcttgatgattcaccaataaatctggttccaagagggataggaagactggaattcctcaatgatttagaaggatttcctgttggtggtggaagtgacaatactaaaatgcaagatggatggaacttgcaggagttaactcatctttcacagttgcgccggcttgacttgaacaaattggaaagagcaactccttggagtagtacatattcattgttgctaactgacaaaaagcatctgaaaaaactaaatctatgctgcactgaaccgactgatgaagcatattcagaggaaggcattggcaatgttgagatgatctttgagcagctaactcctccacgcaatttagaagatcttatgattctatcattctttgggcgaaggttccccacctggtttggtactaaccacttgatttatgtgaaatccgtgatcctcacagattgcaaatcatgcgtgcaccttccaccaacagggcagctaccaaacttgaaatacctgaaaattaagggagcaagtgcaatcaccaagattggacctgagtttgttggctgctgggagggtaatctcagatccacagaggcagtcgctttccccaagcttgaagcattggtcatcaaggatatgcccaactgggaggagtggtcctttgttgaagaagaagaggtgcaggaggaggaagcatctgcagcagccaaggaagggggagaggatggaactgctgcttcgaagcaaaaggggaaagaagccccgtctccaactccgaggtcgtcgtggctgctgccttgtttgaaggagttgtatcttgaggagtgccccaagcttagacagcaggccaccaacttgaaggacctccaattaagagaagcagattgcttgaagaaggtggaagaccaccggttcctctgcttccttttagttgaaggatgtgaaggcctggagaggctctccaaccttccccaagtgagagacctgcgtgtaacacgttgcccaaccttaaagttggtgagcctggtggttgcacacaaggaagacaaggcctacaagctcgctattgttggaacagggggaattggaaagacaacactagctcagaaagtattcaatgatcagaaattaaaaggaaccttcaacaaacatgcttggatttgtgtttctcaggactacaccccagtctctgttttgaaacaactacttagaacaatggaggttcaacatgcacaagaagaatcagctggagagctccaaagcaagcttgaattagctattaaagacaagagtttttttcttgtgttggatgatctatggcattccgatgtatggaccaatctactacgaactccattgcatgctgcaacctcaggaataattttgataactactaggcaagatattgtcgctagggaaataggggttgaggaagcacatcgtgttgacctaatgtcaccagctgttggttgggagctactttggaagagcatgaacattcaggacgagaaagaagtgcaaaatctgcgagacatagggattgaggttgttcagaaatgtggtgggctacctcttgcaatcaaggttactgctcgagtattggcaagcaaagataaaacagagaacgaatggaaaaggattttagctaaaaacgtttggtccatggctaaactccctaaggaaataagtggtgcactatatctaagttatgatgatttaccactgcatttgaagcaatgttttctttattgtattgtatttcctgaagactggaccttgaaacgtgatgagcttatcatgatgtgggttgctgaaggctttgtagaagtgcacaaagatcaattactagaagatacagcagaagaatactactatgaactaataagtaagaatctcctgcaaccagtttacacatattttgatcagagcagatgcaaaatgcatgatctcttaaggcaacttgcttgttatctatcaagggaagaatgtcatattggagatctaaaaccattagtagacaatactatatgtaaactacgacgcatgttagttgtcggagagaaagacacggtggtcatacctttcactggtaaggaggaaattaagttgagaacttttacaactgatcatcagctacagggagttgataacacatttttcatgagattaactcatcttcgtgttttggatctaagtgactcacttgtgcaaacaataccagattatattggaaatttaatccatttacgtttgtttgatcttgatggaaccaacatatcttgtctcccagagtccattggttcccttcaaaaccttctcatattgaacttgaagaggtgtaaatatctgcacttccttcctttggcaacaactcaactgtacaatttgaggcggcttggtcttgctgatacaccaataaaccaagtcccaaaagggataggaagactgaaatttctcaatgatttagaaggatttccgatcggtggtggaagtgacaataccaaaatacaagatggctggaatttgaaagagttggctcatctttcacagttgaggtgtcttgatatgataaaattggagagagctactccttgcagcagtagagacccatttctactaacagagaaaaagcatctcaaagttctgaaactacactgcactgaacagacagatgaagcatattcagaggaaaatgctagaaacattgaaaagatcttcgagaagctaacacctccacacaacttagaagatctttttgttgggaatttctttggttgtagattccccacctggcttagtacttcccaattatcttcactgacatatttgaaactcacagattgcaaatcctgcttgcagcttccaccaatcggacagataccaaacttgaaatacctgaaaattaagggagcaagtgcaatcaccaagattggacccgaattcgttggctcctgggagggtaatctcacatccacagagacaattgctttccccaagcttgaattgttgatcatcgaggatatgcccaactgggaagagtggtcctttgttgaagaagaagaagaggtgcaggaggaggaagcagctgcagcagccaaggaagggggagaggatggaacttttgcttcgaagcaaaagggggaggaagccctgtttccaactccaaggtcgtcgtggctgctgccttgtttgacaaggttggaacttgacgactgccccaagctgagggctctcccaccacagcttggacagcaggccaccaacttgaagaagctctttataagatacacaagttgcttgaagatggtggaggacctcccattcctctctggtttccttcaagttaaaagatgtgaaggcctggagaggatctccaaccttccccaagtgagagagctgcgtgcaggtggttgccccaatttgaggtgtgttgaggagttgggcggtttggagcagctaaggctgtacaaggatatgcaggacatctcttcaccgtgggtctctatgcttcaagagcaacaccaccagctgaatggagatgagcatgtgctggaggtcaacgagtggctctga
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| Protein seq | MNISESIELQTLQDVGIEIVCKCGCLPLAIKVIARVLASKEQTENEWKKILSKNAWFMNKLPNDLRGALYLSYDELPRHLKQCFLYICYIGDPTSLEDNNMCKLRRILVITEKDKVVIPSMGKEEIKLRTLTTQQNPLGIENTFFMRFIYLRVLDLSDLLVEKIPDCVGHLIHLRLLDLDGTNISCLPESIGALKNLQMLHLQRCGSLYSLPSSITRLCNLRRLGLDDSPINLVPRGIGRLEFLNDLEGFPVGGGSDNTKMQDGWNLQELTHLSQLRRLDLNKLERATPWSSTYSLLLTDKKHLKKLNLCCTEPTDEAYSEEGIGNVEMIFEQLTPPRNLEDLMILSFFGRRFPTWFGTNHLIYVKSVILTDCKSCVHLPPTGQLPNLKYLKIKGASAITKIGPEFVGCWEGNLRSTEAVAFPKLEALVIKDMPNWEEWSFVEEEEVQEEEASAAAKEGGEDGTAASKQKGKEAPSPTPRSSWLLPCLKELYLEECPKLRQQATNLKDLQLREADCLKKVEDHRFLCFLLVEGCEGLERLSNLPQVRDLRVTRCPTLKLVSLVVAHKEDKAYKLAIVGTGGIGKTTLAQKVFNDQKLKGTFNKHAWICVSQDYTPVSVLKQLLRTMEVQHAQEESAGELQSKLELAIKDKSFFLVLDDLWHSDVWTNLLRTPLHAATSGIILITTRQDIVAREIGVEEAHRVDLMSPAVGWELLWKSMNIQDEKEVQNLRDIGIEVVQKCGGLPLAIKVTARVLASKDKTENEWKRILAKNVWSMAKLPKEISGALYLSYDDLPLHLKQCFLYCIVFPEDWTLKRDELIMMWVAEGFVEVHKDQLLEDTAEEYYYELISKNLLQPVYTYFDQSRCKMHDLLRQLACYLSREECHIGDLKPLVDNTICKLRRMLVVGEKDTVVIPFTGKEEIKLRTFTTDHQLQGVDNTFFMRLTHLRVLDLSDSLVQTIPDYIGNLIHLRLFDLDGTNISCLPESIGSLQNLLILNLKRCKYLHFLPLATTQLYNLRRLGLADTPINQVPKGIGRLKFLNDLEGFPIGGGSDNTKIQDGWNLKELAHLSQLRCLDMIKLERATPCSSRDPFLLTEKKHLKVLKLHCTEQTDEAYSEENARNIEKIFEKLTPPHNLEDLFVGNFFGCRFPTWLSTSQLSSLTYLKLTDCKSCLQLPPIGQIPNLKYLKIKGASAITKIGPEFVGSWEGNLTSTETIAFPKLELLIIEDMPNWEEWSFVEEEEEVQEEEAAAAAKEGGEDGTFASKQKGEEALFPTPRSSWLLPCLTRLELDDCPKLRALPPQLGQQATNLKKLFIRYTSCLKMVEDLPFLSGFLQVKRCEGLERISNLPQVRELRAGGCPNLRCVEELGGLEQLRLYKDMQDISSPWVSMLQEQHHQLNGDEHVLEVNEWL
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_11g0023470 | OsKeNa_11g0023470.01 | Chr11 | 28345809 | 28346813 | + | NAM | ||
| CDS seq | atgaatgaaaaatttgagttcctcgccagtccagatatagacaccagtgccctcgacaatgttggttatgtacctcatactgtgcatgagcccaacattgttggcaaggagatcatacatgcctgcagaaaaatggtagatttagtgcttgaacataaggggagaaaactttataagcttgcaattgttgggactgggggagttggtaagacaacattagctcagaaaatatacaatgatagaaaaataaaaggaagtttcaacaaaaaagcctgggtttgtgtttctaaagtgtactctgaagcttctcttttgagagaacttcttcgaattatggaagttcatcatgatcaagatgaatcaattggagagctccagagcaagcttgaaatagcaattaaggagacaaattttttacttgtgttggatgacatgtggcaatctgacgcatgggaaaatttattaagaattccattgcatgctgctgaaacgggaacaattctcataacaactagaaataatattgttgccttagaaattggagtggaccatacttatcgagttgatttgatgtcaaccgatgtaggatgggagctattttag
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| Protein seq | MNEKFEFLASPDIDTSALDNVGYVPHTVHEPNIVGKEIIHACRKMVDLVLEHKGRKLYKLAIVGTGGVGKTTLAQKIYNDRKIKGSFNKKAWVCVSKVYSEASLLRELLRIMEVHHDQDESIGELQSKLEIAIKETNFLLVLDDMWQSDAWENLLRIPLHAAETGTILITTRNNIVALEIGVDHTYRVDLMSTDVGWELF |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.635631 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0677000 | RBH | 0.0 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g44990 | SBH | 0.000000 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0677000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0023520 | RBH | 0.015326 | 0.0 | 0.153487 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0023520 | RBH | 0.782490 | 0.000000 | 0.522805 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0023170 | RBH | 0.449589 | 0.000000 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0023150 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0023130 | SBH | 0.0 | 2.865955 | 0.108137 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0410200 | SBH | 0.016715 | 0.3187185 | 0.003874 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0023970 | SBH | 0.036124 | 0.004755 | 0.026227 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0430200 | SBH | 14.200319 | 23.9624835 | 0.1261395 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0023840 | SBH | 1.203734 | 0.746390 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0023790 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0023370 | SBH | 5.354241 | 22.313065 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0023020 | RBH | 0.0 | 0.0 | 0.181259 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0023310 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G023320 | SBH | 0.129080 | 0.795419 | 0.599774 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0023750 | SBH | 0.152510 | 4.768662 | 0.673288 |
