Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsKeNa_07g0000500 OGI:07006270 | 16/16 KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) Chr07:386565-392845
Gene Symbol -
DNA seq

ctatttcttctttgttttgttactgctctccaactctctgttcttttgttgcttttgccctgctgccctgtttgatctctgttggttttttgcatggttcttctctcctgcaagacagttataaccacaaattagtcttttgcacaatttttgcattaagaaaatatatgaacaacaaacttattttcaaaaatgttttctccattatcttttttggatcacctttgcttcttttctttttcttattgttattgtctatcatctgctctactattcttttgcgccttattgatttccttccttttgtattagcttgatctgggtcttgaatttcctcttcctcatttgtttctttttcctgcaattgttcctcttcatttggttctgtgattgtttcatcttctgcaatcattgaatcttctgcaatatctaccaatgttgtgatctgttcctcttgtgcaagcatggaatcaatatgtttatccaacctatccatttcttccagcaggtaattataagtctccactttcttacatgcttttgatgatataagtgcacctttttttgatagtatgttgtaccttaaagctaaattatctccattgtatgtaaatctttcaacatttgtggctatttttttctctcttttcctccacctatcaatgatgtatttgtctggaatcttctgaacatttaattgtaacattattttcaggacatgacaacagagaattccatcctttgaaaacttagcacaaatgcagctgaaatcttcattaggtaagtctgtcataaccatatactttctcggcctccattcttgtcttgtttggtttgttgcagcaaacaccaaatatgtcttgccttcttctatgattgatgtttgtagcattaatgtcttctctagctctaattggaatctttcgaagattgatgagttgtacagttcacacgcttgttcttctatgcagtaatctgaccaaaactcttttggtcttttagtatttgatttatggtcattgttgtgctgtgtttcaaatattctgtcattgattctatcatgctcctttaggaaactagtgacactgtgtcttgggcccacctcttttttgtaccttgcatttgttccttcgcttagagttgtgctatggataaatgggaaccaatcattcttgaagtatacagggatacatgttgcccttgctttaaacattagctgtaaatatttcacattctgtaggttatatttctcaatcatttgtggccaaagagtttcaaactcttgctcagtcagacaattgtgcacaatatcatcaaaatctttgtacagctgcttctttgtttcatctgttttgcttgtgattgtgaatgtggtgctagttttttccctgcaatttttcatgatgtgaaataggcaatttctatgtttggtacttttgattacttgtgctattgcagatctcatagcattatcttgatcagtaattatgcttcgtggctccttcccacccattgccgttagaaatgtctcaaagacccacttgaaagtctctattgtctcatctccaaggaatgcacaaccaaatatgcatgtatttgcatgtcctgtcgtaccaacaaaaggtgcaaatggcaagtcatatcggtttgtcttgtaggttgtatcaaaactcacaaaatctccaaactgctcatataaatccctacatctgccatctgtccaaaacatgtttgttactttgttattctcatctagcttcagcttgaagtaaaaacctagatcttctgcttcttttttccttaaataccgcaagacttgactcatgtccttgttctttgtttctgaattacttgatgaagcgacgttgccgatgtctttctttgtatatggcagcgatgataaccctccacggagtgatgccagtatcaccaccatgcttcttgttggtatgttacattcttttagtgttagaattaagctcttctcttcctgtgtcatgtctttgtatgagtagaggaattttctctcttctggggggcaaagattgtggttgtgactgagatctagtcttataacactccatatgccattattttctctaacaaccatcacacatttgcaatcagttctcactagaacatttgtatttcttgtccctttctttttctgaacttggttggttgcattgtcctgattttttccatgcctgttgcatttgtatgtgtatttgatgacttcattgttccttttcttgtcactggtcttcaggctgtgggcaatcacaatggagaatccaattaaataagcatataagttgaagaatgtgtatgcttcatcatcagtcttgaattgcatcccttcacaaggtatatgacggctatctatctcatcattgtcagcttcctcttcatctgctacactttctttattttctttgtctgtcatttctgcattatcttctgtagaagctatgctagcttgcactgcaccatttacttgctcaagtactgaattctctgtgctagtaatttgtacctgaatttttaaaaaatatttcatattatgtgttagtagtcgcacttggatgttaagtagtaaagaaacattatttttattgtacaatataataacaaaaaaaatgaacatttgttctaaagtaacctcattgccccaattgtcttcatgttcctccaataaccattgattcacattggagcactctccaatagagttgctcactgactcaatattgtgtatgtgctgcaaaatcaacttgttctcttaatttttgttttctgttgtaataaaaaaagtattcccatgcatacaaataaaaataaaaacatattataaactaacaaaacacatacatagtgattgtcattgttactgttatatattttctctatatcattttctatgcattggtcttcaaaaggcatctgcatggacaagtgggagcatgtgtaagaaacgagatttttttttttgcttttttgtttaatattttgtgttaattatcttactatacctgcacttcttgttctgcttcaagaactgcttgatcaaagttatcaatgcatctgtttgttgtgagaatcattgagttctgcatggaagacaaaataaatagtgtgttacaattggaaatacagtaatatagttatgtccagtttattgttcaaataccaagttaagagttttatccaacttacattgtatcctattggtgattgaaggtgatagttcatttcagcaagccttccctgcatttttttgtccagaaaatttattagtttaacatgaaacttttaatttcagcgctgattgcttttacaaaaaagttatgatttgcttcttgtcacctgattggtatgcaagtttatcttaggactttgactttgaataacttgctgcatcagcgctgtgtagctcatttgttgtccctgcatatatttcaacgttaaatttattagcaatataataataaagactgttatcactatgtccaactaattttttttctctcaccagctctgtttgcaagcttagcaacgcgtactcttcatgtaacatctgtcccccataagctatttctgtagaattggtacctgcattttgataagaaaaaatgttagttgtagttttataattttatcatttttctatcaaataaaatttcagttgttttattatttcccataattttgttcatatagcatggttcactgtgatttatatgctgtctagtttctatctcccaaattggcactttttgtttgaactgcatttttttaaaaacttaaataacaaaaacaagaaatttacaaatgtaaattcagttatagaccaatgtaattttatttattatttaaatactagtcttttatagactcatcaaccaatctccttgttttgaaatgcattaaatttatttcattggaacttacattgacattatattgaaattacaaatgtaatttacacggtaggtcaatgtaattctaccgaattatagtaaattagtctaggtttgttttatgaactgtgaattttgttttgtgaatgtaattttctgttttcttcattgatatgaatatagtagttcaaattgaagttaaaaaaatacggttttcgccataaatcttctctaattacagtaagtttgttagccctcaaagtttcgtttagattcgtgcaggactgctttgccattatgcgtgcaagcactagtccgtactatatacacatgcacctgtgctgcttgctgtgatttatccgatcgatcacgctcctttgctatctacatgtaaaattacaccctacttacactctatttacatatgtaattttaatatttacatatgtaattttaggatttacatatgtaattttggatatttacattgtaaatacactaaaattacatatgtaatttaggaatttacaatgtaaatacatgccgagttttttttgggtaaaaaatatggcgccataaatatagctacacccaaaataacatagagagcagtgctcttgcagtttgttctcttacattagttatacattgaaactacaaatgtaattttagtaataggtaaatgtttttttttatcatacttacacccgacttacaaactagttacatcctagttacaccctacttacacactagttacatcctagttataccctacttacatcctagttacatatgtaatttttattatatttgactgtaaattttgtgttgtcctatttctaggtaaaatttaatttgctatgtcttatcaacgggttatgctgtgtcaatgtgctttgtctggaatgaagtagttttataatttaatttgaagttgaagtataatttctctggaatgaagtagttttataattgtattcaagtttggtgtagatttgttagttgaaattttgttgaagtataatttctctggaatgaagtagttttataattgtattcaagtttggtgtagatttacactatttttcctgaacttacattgatttaatattgaaattacaaatgtaattttcatctatggccaatgtaattttctcctttttaagtttatttttcgctaggttagtactttactgtgtaattttggtttcaacttccatatatatttttatatgaatttaatttagtttacagtgaagatgtttgcatcattgtagcaatttgttcacttcttacattgttaatatgttgaaattacaaatgtaattttagttactggtgaatgtattttctttttgcaattttgtaacttgttgtttcctaacattcaattttgtagttctttgttttaactacttctaattttgtaagtgtgtatattcctatgttcatggactgcttggattagtcttcattgattcacggcgagatgttgctagcttcttgtgtgccatgttatatgaattgattgaaaacaaaacttgtattcatgtctggtcacttgggcatttttttggtaggatgtaaaaatttttggacagtgaaacacaattgacagtatctactgtactttgtacttgaaagcatccccattgttgtattttatctcaatttacattgcatacagactaaacttacaaatgtaattttagtattaggtgattataattttttgagtttgtttttatggcattagcaaactctaaactttcataatgttgaaattttgggcaaaatgtcttactgtatggtggattagggcgattggggatggtgtagtattaggtgtatagtgaagtaagaaaatttcaaaaagtaagctgcaaaatggatttgtttttagtagttgattgttgtatacattattcatcagtagtgcttctcctggatagtgatgtttgtattttggtttgtcagtagtttttcactaatctaatttattaaatacaacaagcttgatctgatcagcatattcattttctagatctaggtgactttggtgagaagtatattgtgttaagatgaaaggagtatgtgtggggggatgcgacttgcatatatgtcatgaagaagaacataaaacagatctggatgccatatagctgtaaggtttgtaagattcttacctgcagaagacaagtttgctctagggtttgtgctctcttccatctgaatggattttgcgatctgcttttctgatgagaaatccttggttgttgagattgtaggatttcccatggtgtttttttcttgagcagattccaattccttttgtctagatttctcagcgatctccat

More
CDS seq

atggagatcgctgagaaatctagacaaaaggaattggaatctgctcaagaaaaaaacaccatgggaaatcctacaatctcaacaaccaaggatttctcatcagaaaagcagatcgcaaaatccattcagatggaagagagcacaaaccctagagcaaacttgtcttctgcaggtaccaattctacagaaatagcttatgggggacagatgttacatgaagagtacgcgttgctaagcttgcaaacagagctgggacaacaaatgagctacacagcgctgatgcagcaagttattcaaagtcaaagtcctaagataaacttgcataccaatcagggaaggcttgctgaaatgaactatcaccttcaatcaccaataggatacaataactcaatgattctcacaacaaacagatgcattgataactttgatcaagcagttcttgaagcagaacaagaagtgcaggtacaaattactagcacagagaattcagtacttgagcaagtaaatggtgcagtgcaagctagcatagcttctacagaagataatgcagaaatgacagacaaagaaaataaagaaagtgtagcagatgaagaggaagctgacaatgatgagatagatagccgtcatataccttgtgaagggatgcaattcaagactgatgatgaagcatacacattcttcaacttatatgcttatttaattggattctccattgtgattgcccacagcctgaagaccagtgacaagaaaaggaacaatgaagtcatcaaatacacatacaaatgcaacaggcatggaaaaaatcaggacaatgcaaccaaccaagttcagaaaaagaaagggacaagaaatacaaatgttctactaatgtttaaagcaagggcaacatgtatccctgtatacttcaagaatgattggttcccatttatccatagcacaactctaagcgaaggaacaaatgcaaggtacaaaaaagaggtgggcccaagacacagtgtcactagtttcctaaaggagcatgatagaatcaatgacagaatatttgaaacacagcacaacaatgaccataaatcaaatactaaaagaccaaaagagttttggtcagattactgcatagaagaacaagcgtgtgaactgtacaactcatcaatcttcgaaagattccaattagagctagagaagacattaatgctacaaacatcaatcatagaagaaggcaagacatatttggtgtttgctgcaacaaaccaaacaagacaagaatggaggccgagaaagtatatggttatgacagacttacctaatgaagatttcagctgcatttgtgctaagttttcaaaggatggaattctctgttgtcatgtcctgaaaataatgttacaattaaatgttcagaagattccagacaaatacatcattgataggtggaggaaaagagagaaaaaaatagccacaaatgttgaaagatttacatacaatggagataatttagctttaaggtacaacatactatcaaaaaaaggtgcacttatatcatcaaaagcatgtaagaaagtggagacttataattacctgctggaagaaatggataggttggataaacatattgattccatgcttgcacaagaggaacagatcacaacattggtagatattgcagaagattcaatgattgcagaagatgaaacaatcacagaaccaaatgaagaggaacaattgcaggaaaaagaaacaaatgaggaagaggaaattcaagacccagatcaagctaatacaaaaggaaggaaatcaataaggcgcaaaagaatagtagagcagatgatagacaataacaataagaaaaagaaaagaagcaaaggagagaagaaccatgcaaaaaaccaacagagatcaaacagggcagcagggcaaaagcaacaaaagaacagagagttggagagcagtaacaaaacaaagaagaaatag

More
Protein seq

MEIAEKSRQKELESAQEKNTMGNPTISTTKDFSSEKQIAKSIQMEESTNPRANLSSAGTNSTEIAYGGQMLHEEYALLSLQTELGQQMSYTALMQQVIQSQSPKINLHTNQGRLAEMNYHLQSPIGYNNSMILTTNRCIDNFDQAVLEAEQEVQVQITSTENSVLEQVNGAVQASIASTEDNAEMTDKENKESVADEEEADNDEIDSRHIPCEGMQFKTDDEAYTFFNLYAYLIGFSIVIAHSLKTSDKKRNNEVIKYTYKCNRHGKNQDNATNQVQKKKGTRNTNVLLMFKARATCIPVYFKNDWFPFIHSTTLSEGTNARYKKEVGPRHSVTSFLKEHDRINDRIFETQHNNDHKSNTKRPKEFWSDYCIEEQACELYNSSIFERFQLELEKTLMLQTSIIEEGKTYLVFAATNQTRQEWRPRKYMVMTDLPNEDFSCICAKFSKDGILCCHVLKIMLQLNVQKIPDKYIIDRWRKREKKIATNVERFTYNGDNLALRYNILSKKGALISSKACKKVETYNYLLEEMDRLDKHIDSMLAQEEQITTLVDIAEDSMIAEDETITEPNEEEQLQEKETNEEEEIQDPDQANTKGRKSIRRKRIVEQMIDNNNKKKKRSKGEKNHAKNQQRSNRAAGQKQQKNRELESSNKTKKK

Function Protein FAR1-RELATED SEQUENCE 3 [UniProtKB/Swiss-Prot:Q9ZVC9]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsKeNa_07g0000500 OsKeNa_07g0000500.01 Chr07 386565 392845 - NAM
CDS seq

atggagatcgctgagaaatctagacaaaaggaattggaatctgctcaagaaaaaaacaccatgggaaatcctacaatctcaacaaccaaggatttctcatcagaaaagcagatcgcaaaatccattcagatggaagagagcacaaaccctagagcaaacttgtcttctgcaggtaccaattctacagaaatagcttatgggggacagatgttacatgaagagtacgcgttgctaagcttgcaaacagagctgggacaacaaatgagctacacagcgctgatgcagcaagttattcaaagtcaaagtcctaagataaacttgcataccaatcagggaaggcttgctgaaatgaactatcaccttcaatcaccaataggatacaataactcaatgattctcacaacaaacagatgcattgataactttgatcaagcagttcttgaagcagaacaagaagtgcaggtacaaattactagcacagagaattcagtacttgagcaagtaaatggtgcagtgcaagctagcatagcttctacagaagataatgcagaaatgacagacaaagaaaataaagaaagtgtagcagatgaagaggaagctgacaatgatgagatagatagccgtcatataccttgtgaagggatgcaattcaagactgatgatgaagcatacacattcttcaacttatatgcttatttaattggattctccattgtgattgcccacagcctgaagaccagtgacaagaaaaggaacaatgaagtcatcaaatacacatacaaatgcaacaggcatggaaaaaatcaggacaatgcaaccaaccaagttcagaaaaagaaagggacaagaaatacaaatgttctactaatgtttaaagcaagggcaacatgtatccctgtatacttcaagaatgattggttcccatttatccatagcacaactctaagcgaaggaacaaatgcaaggtacaaaaaagaggtgggcccaagacacagtgtcactagtttcctaaaggagcatgatagaatcaatgacagaatatttgaaacacagcacaacaatgaccataaatcaaatactaaaagaccaaaagagttttggtcagattactgcatagaagaacaagcgtgtgaactgtacaactcatcaatcttcgaaagattccaattagagctagagaagacattaatgctacaaacatcaatcatagaagaaggcaagacatatttggtgtttgctgcaacaaaccaaacaagacaagaatggaggccgagaaagtatatggttatgacagacttacctaatgaagatttcagctgcatttgtgctaagttttcaaaggatggaattctctgttgtcatgtcctgaaaataatgttacaattaaatgttcagaagattccagacaaatacatcattgataggtggaggaaaagagagaaaaaaatagccacaaatgttgaaagatttacatacaatggagataatttagctttaaggtacaacatactatcaaaaaaaggtgcacttatatcatcaaaagcatgtaagaaagtggagacttataattacctgctggaagaaatggataggttggataaacatattgattccatgcttgcacaagaggaacagatcacaacattggtagatattgcagaagattcaatgattgcagaagatgaaacaatcacagaaccaaatgaagaggaacaattgcaggaaaaagaaacaaatgaggaagaggaaattcaagacccagatcaagctaatacaaaaggaaggaaatcaataaggcgcaaaagaatagtagagcagatgatagacaataacaataagaaaaagaaaagaagcaaaggagagaagaaccatgcaaaaaaccaacagagatcaaacagggcagcagggcaaaagcaacaaaagaacagagagttggagagcagtaacaaaacaaagaagaaatag

More
Protein seq

MEIAEKSRQKELESAQEKNTMGNPTISTTKDFSSEKQIAKSIQMEESTNPRANLSSAGTNSTEIAYGGQMLHEEYALLSLQTELGQQMSYTALMQQVIQSQSPKINLHTNQGRLAEMNYHLQSPIGYNNSMILTTNRCIDNFDQAVLEAEQEVQVQITSTENSVLEQVNGAVQASIASTEDNAEMTDKENKESVADEEEADNDEIDSRHIPCEGMQFKTDDEAYTFFNLYAYLIGFSIVIAHSLKTSDKKRNNEVIKYTYKCNRHGKNQDNATNQVQKKKGTRNTNVLLMFKARATCIPVYFKNDWFPFIHSTTLSEGTNARYKKEVGPRHSVTSFLKEHDRINDRIFETQHNNDHKSNTKRPKEFWSDYCIEEQACELYNSSIFERFQLELEKTLMLQTSIIEEGKTYLVFAATNQTRQEWRPRKYMVMTDLPNEDFSCICAKFSKDGILCCHVLKIMLQLNVQKIPDKYIIDRWRKREKKIATNVERFTYNGDNLALRYNILSKKGALISSKACKKVETYNYLLEEMDRLDKHIDSMLAQEEQITTLVDIAEDSMIAEDETITEPNEEEQLQEKETNEEEEIQDPDQANTKGRKSIRRKRIVEQMIDNNNKKKKRSKGEKNHAKNQQRSNRAAGQKQQKNRELESSNKTKKK

More
Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_07g0141500 SBH 0.093649 0.135214 0.915561
Nipponbare | IRGSP 1.0 | MSU LOC_Os07g01270 SBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os07g0141500 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_07g0017740 RBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_09g0004100 RBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_07g0010640 SBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_07g0017500 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_07g0017650 RBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_07G0036900 RBH 2.443092 3.0872255 4.310263
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_02g0011430 SBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_09G0105200 SBH 0 0 0.0826315
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_07g0017370 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_07g0017560 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_07g0017500 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_07g0017760 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_07g0017540 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_07G000230 SBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_07g0000230 SBH 0.0 0.0 0.0
Powered by

© 2021- Rice Gene Index @Zhang Lab. All Rights Reserved.

National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

Any comments and suggestions, please contact us.