Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_06g0011870 | OGI:06030430 | 11/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr06:10244342-10275961 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ctagggcagcattctttgagaacaggaccatttacagtattttgctatgtcctgagtaaacagcatgttacaaattAGAaaaaaaaaagatagggaattcaaagatagacacaggattttctctaggacaggaattaataattaaaaatgatttacctgatgcgagttatgtgcatctataccatcccatgttccttttctttttgctaccctcagagatcctcttgcgtttgggattgcagaacttgataaggttctgaatacagaaaaaaaaaagcgtatcgcagtatcagtgaaccatagcggcaaagtcacaaaataagtacctggagaagtgcagaaagtcaacacagctacaatcgttttccttcactttccttatcttaaatatcacaggtaaagaagggaatcaggatatgtgccagtaccacatatgtatgctctgcataaaactacatagtcgatgcaaaagcttaatgcaacttgactggcagcaatatatatatagcactaaataaccaaagcttaatatcaactggaatagaagggaactagtgaagattttgttatcacaaattgcagaacctggtgatgccattctccccaagatgtacatcagttgccttttctattgggggtgtcaaaatggatggagaaatattggcgggaaaattccattttgtcttttgaacccttctcaaaattcatttttcgatctcaactaaaagaccagttgtttttcagcctcaagtttcAaaactggacaaacaccaccttaaggcctattttatagtggttttgtttaaaacaaaggtggttttcacaagtgccaactcctattatacatattttccagacatagatgacacttagataagttcacatcaatgaaatgaaacttaattggtgtacatgcttactatcatgccaatcaaagccaccttggaatatggtttagggtgttatttacccggttttgaatgttaaccgttgagggtcaacaacaaatggtgtttttagttaagggtgaaaagtggacttcaagaagatttcaaggaccaaaatacgacttaacccaatcctgagataaaaccaacgagatgtttccccaaacctattcatgcaaaactgtccaattcattttcatgtgaacagccacctgtattataacgaacgaaaagaaaattcgcatgtttcaagcattattcatctcctcatgaaaccaatcagttacatacaactaaacatgatcaaaattctaatcatattcaaccaaggagaagaataaaaaaggctgctgcgtctggaatcttatctccctaaatgaaaaatgttgaatattttgttcagcaacaaagaacatcatatcctgtagtcctgaacaaaaaccaaagacatgattttcatctaaaatacaaagacatcacaacagtggcaaaaaggagtttttttttttcaacaacctgcaagacgttcgcacatcatagcattaagaagtaaaagaatggggcagacaattgagaacatgtgcgactactgccccctagccaaacttgggaaacaactaaaacgaaatgacaagcacactgaactattcaaaatgacttaagagaacttatatgtgatacaagacacagtctacctccacctattactgtccttttgatttcttgaaccaaatgatcaaggaatttgaaaacattgttccaacaatctgctcagctccttgttattttgttactccttgttattctccagcacagaggccacctacctttcctttctttcagccattttgcgataccactcaataaaataattacaatcataaggtatagcaccaccccgcatactaccaagaagacaaatattgatgttctgacctttctgcagcttccagctgcataagctgtcatcagagccaacaggtctagtatcatgatcaagaacaatgcttggagtggaaccttattctttctcacagatttactcagcagaagcatgattacagcaatagatgccatgaaagagatggaattagaaacatagaacaccatatagcgtctggagtgtatgtccttaaggagcgggttgccagccttgtagccatcacgactgtcctctgaccagaaaCccccgggtgggttcagaccagcttggtaagcaatggatgcagcaagaattgcaagcagcatcaagtacttatgcctcttttctttcttttcattgataaggggatctgacttgtcactttcattttttgactgacctggacttgctagtgacttttgagaatcagcaagcccaaaaaacttctgtaaccatctccctgacctggctggcggttctagtgcatcatttgttgatgacagtacaagaacttgaattaaaagacagatgagaactgcagcagttatgataatgagacaacctattgattttactttcctgaagcttcctgcagaataagcaatcaggagaccaagcaaacccgctatcaagcagacacgcagtgcgtaggacttgattccatgctcgcacgattccctattgacaagtagtatgataacagccacagatgacacaaatgagagcatttgaatagtagaaaacatcataacgctttggatggctatcttgaagaactggattgccaggtttgccactcccatcaggccaaatgccacctggagggttcaggccagcttgatatgtgacagttgctgttagaatagcaagaatgaatagcaaattacgcctccgctccaagtccttctcatgagcatcctttgcatcattatctacatgatgttcttgtagtacatcctgtcgccgcttaaacaattgtttccactgttcaggaactgcatactttgaagccaaaacatgaagaaaagtatatgcaactactacaaaaaatatcaccactgatatgtaaatggactttgttttctccctgcagctcccaacaacaaaagcccccaatagagcaagtaagtcagttatcatcgccgtttgtagtgcacggcgttttataaccttgttgctcatcttcctgttcaggagcataatgagcatgacaagagaagctagaaaggcaatcgcgttgaaataaaagaatgcaaggtatctcttatggaaattatcctcaaggatgggatcaccagctgagtgactaggggtatttgatgtccaaaagccacctggtggatttatacccgcctgatatgtcaaggacactgcaagaattgcaagaagcaataggtatgtgcgtgacttcttaagacgaacatcatctgggtttttctcgctgtcaccactgattctacctttatcccttgtgccatcattattgctcacaatgccatcctccgactttctgacttctccatcagcctctgaactatcatgatgaccgctcagttcttgagtttgttcttcacgatccctctggcacttggctatattatgttcagtgtcaggcacatcagctgatactgtccgatcaccaagtgctgaaattggttcggacaagacctgctctggcagaggaccttttctacttggtacatctgctgatgaagagtgtactgttgcaatggccaaattatctttctgatcatgaagttgatttgccatattgggtatgctatcttttatgctttccaaatcattggttggtgcagattttacatcttcagttgattggtcacccaaatttccatgatctgtatcctgccgagaacttgacaagggtccttctcgatttccatctgataaccggttttcccgtggccatgaaagcatttctagaaaatggtcaaatctaggtctcaatgcattatcgatccaaattgttacagttctggattgaaagaacataacaaggatcaaggcacatattaaaaccacaacaattatgaagatcacagacagtgatgttgcaacatccctgcagcttcctgcagcataagcaaaaatcagaccaaacagttcggctatgacacacacaaacaatgcctgagtccttatcccatgccggctcaattctgtgctcagaagtaatatgattgtgaccaaagatgccacaaaagaagttgcattggaacaggtgaaaatattgaagcggcgaaggttgtgcctgcgaagaacaaaagtagctggacggtagccatgactgttttcagcccaaaagccaccaggtggactcattccagcttggtatgtgatagtagcagcaaaagttgagagcatcaatatgaacttacgagcttcctcgatttcttccttatcattttggttgctcctttgcttcttggggagatgacaaatggttagaacttgcttcagcattctttgcagcttctgtacagtttgatgcataaatgtttgtacaccctcttttaaccattttggaaccacccttatgaatactagaatgtggattccaacatagaagaaaacagataaaactagcaccaatatataaacagaagactttagagctctgcaactccctgcagcataggcccccataaggctaaagaggtccaatatcatggtaacctgcatcgcacgaagccataaatgctgattggccacacccctacttagaagcaagatgattaagaccagagatgcagcaaaggctgttgcattgcagtaaaagaatgcttcatatcgctggaagaatttagatggaaggagaggatcaccagcatgatggacagggctgtcgtccgtccaaaatccccctggtggactcagtccagcattgtatgtgacactaacagctagcacagcaagaagtagcaaatactttcgcaacctccacaagaacacaaaatcagtcttgatcctgacttcatggctattgagtgatgctgacctgctggagctgttgccagaatcttggtctttaatttcaaccatcttgctatcttgctggctttcgatgtcggctgcttcatctgccatctgaccatcatcgcgcgattctg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| CDS seq | atggcaaatggcacgagccaagacgataacattgagggtaattttaagctattgtggagtttacggaagtatttgatactgcttggaaccatagcagtcggtgtgacatacaatgctggattaacaccaccagggggatttTggacactaaataaggataagcaccaggctggtaatcctgttcttcctgttggttactttcaacggtatgaggtattcttttactgcaatgcaacggcctttgctgcatctcttgtcttaatcatcttgcttctaagtaagagtgcaaccaagcatgtgttgtggctccggtcaatgcaatttaccatgatactggacctattcagcctgatgggggcttatgctgcaggaagctgcagggcacttaagtcatccatttatacctggattctagtttTTgctgttttcttgtatgttggggtacatgtcctagtattcatgagggttattccagataagttgaaagagatgatacagaaattatggggtgtccacgacaggcaaagtgacagacatcaagacaaagatgttgaggatgctcgcaagttcatcttgattcttgtaacatttactgctactgtcacataccaagcaggtttgagtccaccaggtggcttttgggctgaaaatgagtatgatccgcttagtaagctgcctccagcctttcctccttacaagcaccagccagctacttctgttcttcgcacttctttggtcacagtcatattgcttctgagcacagaattgagcaaacatgggataaggtccaaagcagtcattaatttcaaaaaagtgagtctgcggtgtgtgagtgcaacgggttggatgctctcatcgagctccaggagcaacggattcagtaatggagatcataaccatgacactgagattgttggcaccaatgatgatactgaacctgttgctaatggccatattcacagcaaccaagcagcaccaattcaaaatgttaatggcaatcaaattgaggagcacttgaataaggcccgcaaaaatctgctgcttcttgccattcttgcagtatccctgacatatcaatcaggtctgaatccaccaggtggcttctggtcaggaaatgaattccgtcatgcagacggtgatcacatccttgaagaataccatcattcagctggtgatcgcattcttgaggacacataccattcccgctttattgcattcttttatctcaacgcagtggcctttgtggcatctgttgttatgatcattttgctcttgaacaaggtgatgatcatgaaggttacaaaacagtgtacattgcagatagtcatgattgtgaatctcctttccctgactggagcatttgttatggggagctgcagggaagcaaataagtccatttatatatcagtgttactctgtctggtacttgcctacgttcttgttcatgttctaatagcaatacatgttctatgtggaatggcatcgccggcatcatctgtgtcaccgcagaaccgaaCAgaggatactaaggagttggggaggaggcgtaatctactattgacactttcagttctagctgcaactgtcacataccaagctggcatgaatcctccaggaggtgtatggtctgatgacaaggatgtcagtggcaagccaggcaatccgatcctccaggacacccacccaaaacgctatgatgtgttctattactcaaattcactatcctttgtgtcttctgtagttaccacaatactacttgtgaacaaggaatcctgtgagcatgggataaaatcgcatgcattgcgagtgtgtttggtggtgggcttggttggcctcttaatcgcctatgctgctggaagttgcaggaaagcaatacagtctatttatctgatcatcattgctgttgcagttttgatctccgttgtgattcaagtctttctactctcttcaacaaatagtaatacactgcagacgtttttgtcaatacgggatgtcaatcaagacagttcttctgggccgcaagaaagtacagatcctcaagagaaaaaagagaggaaaaggaaaaagtatctgatgctgctttcagttttagcagcttccatagcataccaagctggtctgaatccacctggtggcttttggccggatgacggtggccacaaggctggcaatccaattcttcatgatgtgaatcataggcgctacaaaacattcttctgcttcaacgcattctccttcatgtcatcaattgttgtgatcatgcttctgctgagtagaactatcagagagaaggatgtacatattgatgtattgtacttgatcatgatacttgatttactgggtctcatgacagcttttgctgcaggaagctgcagaagattcaggacatcagtctatgtctatgggctaggtgtctctgacatgcaacctcaccgggggagtgagagcatagctgaggcggatggcggacaccctcagagtgagattgttgagagcaatagcctccctactccagaatcgcgcgatgatggtcagatggcagatgaagcagccgacatcgaaagccagcaagatagcaagatggttgaaattaaagaccaagattctggcaacagctccagcaggtcagcatcactcaatagccatgaagtcaggatcaagactgattttgtgttcttgtggaggttgcgaaagtatttgctacttcttgctgtgctagctgttagtgtcacatacaatgctggactgagtccaccagggggattttggacggacgacagccctgtccatcatgctggtgatcctctccttccatctaaattcttccagcgatatgaagcattcttttactgcaatgcaacagcctttgctgcatctctggtcttaatcatcttgcttctaagtaggggtgtggccaatcagcatttatggcttcgtgcgatgcaggttaccatgatattggacctctttagccttatgggggcctatgctgcagggagttgcagagctctaaagtcttctgtttatatattggtgctagttttatctgttttcttctatgttggaatccacattctagtattcataagggtggttccaaaatggttaaaagagggtgtacaaacatttatgcatcaaactgtacagaagctgcaaagaatgctgaagcaagttctaaccatttgtcatctccccaagaagcaaaggagcaaccaaaatgataaggaagaaatcgaggaagctcgtaagttcatattgatgctctcaacttttgctgctactatcacataccaagctggaatgagtccacctggtggcttttgggctgaaaacagtcatggctaccgtccagctacttttgttcttcgcaggcacaaccttcgccgcttcaatattttcacctgttccaatgcaacttcttttgtggcatctttggtcacaatcatattacttctgagcacagaattgagccggcatgggataaggactcaggcattgtttgtgtgtgtcatagccgaactgtttggtctgatttttgcttatgctgcaggaagctgcagggatgttgcaacatcactgtctgtgatcttcataattgttgtggttttaatatgtgccttgatccttgttatgttctttcaatccagaactgtaacaatttggatcgataatgcattgagacctagatttgaccattttctagaaatgctttcatggccacgggaaaaccggttatcagatggaaatcgagaaggacccttgtcaagttctcggcaggatacagatcatggaaatttgggtgaccaatcaactgaagatgtaaaatctgcaccaaccaatgatttggaaagcataaaagatagcatacccaatatggcaaatcaacttcatgatcagaaagataatttggccattgcaacagtacactcttcatcagcagatgtaccaagtagaaaaggtcctctgccagagcaggtcttgtccgaaccaatttcagcacttggtgatcggacagtatcagctgatgtgcctgacactgaacataatatagccaagtgccagagggatcgtgaagaacaaactcaagaactgagcggtcatcatgatagttcagaggctgatggagaagtcagaaagtcggaggatggcattgtgagcaataatgatggcacaagggataaaggtagaatcagtggtgacagcgagaaaaacccagatgatgttcgtcttaagaagtcacgcacatacctattgcttcttgcaattcttgcagtgtccttgacatatcaggcgggtataaatccaccaggtggcttttggacatcaaatacccctagtcactcagctggtgatcccatccttgaggataatttccataagagataccttgcattcttttatttcaacgcgattgcctttctagcttctcttgtcatgctcattatgctcctgaacaggaagatgagcaacaaggttataaaacgccgtgcactacaaacggcgatgataactgacttacttgctctattgggggcttttgttgttgggagctgcagggagaaaacaaagtccatttacatatcagtggtgatattttttgtagtagttgcatatacttttcttcatgttttggcttcaaagtatgcagttcctgaacagtggaaacaattgtttaagcggcgacaggatgtactacaagaacatcatgtagataatgatgcaaaggatgctcatgagaaggacttggagcggaggcgtaatttgctattcattcttgctattctaacagcaactttcttcaagatagccatccaaagcgttatgatgttttctactattcaaatgctctcatttgtgtcatctgtggctgttatcatactacttgtcaatagggaatcgtgcgagcatggaatcaagtcctacgcactgcgtgtctgcttgatagcgggtttgcttggtctcctgattgcttattctgcaggaagcttcaggaaagtaaaatcaataggttgtctcattatcataactgctgcagttctcatctgtcttttaattcaagttcttgtactgtcatcaacaaatgatgcactagaaccgccagccaggtcagggagatggttacagaagttttttgggcttgctgattctcaaaagtcactagcaagtccaggtcagtcaaaaaatgaaagtgacaagtcagatccccttatcaatgaaaagaaagaaaagaggcataagtacttgatgctgcttgcaattcttgctgcatccattgcttaccaagctggtctgaacccacccggggGtttctggtcagaggacagtcgtgatggctacaaggctggcaacccgctccttaaggacatacactccagacgctatatggtgttctatgtttctaattccatctctttcatggcatctattgctgtaatcatgcttctgctgagtaaatctgtgagaaagaataaggttccactccaagcattgttcttgatcatgatactagacctgttggctctgatgacagcttatgcagctggaagctgcagaaagataaggaaagtgaaggaaaacgattgtagctgtgttgactttctgcacttctccagaaccttatcaagttctgcaatcccaaacgcaagaggatctctgagggtagcaaaaagaaaaggaacatgggatggtatagatgcacataactcgcatcaggacatagcaaaatactgtaaatggtcctgttctcaaagaatgctgccctag
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| Protein seq | MANGTSQDDNIEGNFKLLWSLRKYLILLGTIAVGVTYNAGLTPPGGFWTLNKDKHQAGNPVLPVGYFQRYEVFFYCNATAFAASLVLIILLLSKSATKHVLWLRSMQFTMILDLFSLMGAYAAGSCRALKSSIYTWILVFAVFLYVGVHVLVFMRVIPDKLKEMIQKLWGVHDRQSDRHQDKDVEDARKFILILVTFTATVTYQAGLSPPGGFWAENEYDPLSKLPPAFPPYKHQPATSVLRTSLVTVILLLSTELSKHGIRSKAVINFKKVSLRCVSATGWMLSSSSRSNGFSNGDHNHDTEIVGTNDDTEPVANGHIHSNQAAPIQNVNGNQIEEHLNKARKNLLLLAILAVSLTYQSGLNPPGGFWSGNEFRHADGDHILEEYHHSAGDRILEDTYHSRFIAFFYLNAVAFVASVVMIILLLNKVMIMKVTKQCTLQIVMIVNLLSLTGAFVMGSCREANKSIYISVLLCLVLAYVLVHVLIAIHVLCGMASPASSVSPQNRTEDTKELGRRRNLLLTLSVLAATVTYQAGMNPPGGVWSDDKDVSGKPGNPILQDTHPKRYDVFYYSNSLSFVSSVVTTILLVNKESCEHGIKSHALRVCLVVGLVGLLIAYAAGSCRKAIQSIYLIIIAVAVLISVVIQVFLLSSTNSNTLQTFLSIRDVNQDSSSGPQESTDPQEKKERKRKKYLMLLSVLAASIAYQAGLNPPGGFWPDDGGHKAGNPILHDVNHRRYKTFFCFNAFSFMSSIVVIMLLLSRTIREKDVHIDVLYLIMILDLLGLMTAFAAGSCRRFRTSVYVYGLGVSDMQPHRGSESIAEADGGHPQSEIVESNSLPTPESRDDGQMADEAADIESQQDSKMVEIKDQDSGNSSSRSASLNSHEVRIKTDFVFLWRLRKYLLLLAVLAVSVTYNAGLSPPGGFWTDDSPVHHAGDPLLPSKFFQRYEAFFYCNATAFAASLVLIILLLSRGVANQHLWLRAMQVTMILDLFSLMGAYAAGSCRALKSSVYILVLVLSVFFYVGIHILVFIRVVPKWLKEGVQTFMHQTVQKLQRMLKQVLTICHLPKKQRSNQNDKEEIEEARKFILMLSTFAATITYQAGMSPPGGFWAENSHGYRPATFVLRRHNLRRFNIFTCSNATSFVASLVTIILLLSTELSRHGIRTQALFVCVIAELFGLIFAYAAGSCRDVATSLSVIFIIVVVLICALILVMFFQSRTVTIWIDNALRPRFDHFLEMLSWPRENRLSDGNREGPLSSSRQDTDHGNLGDQSTEDVKSAPTNDLESIKDSIPNMANQLHDQKDNLAIATVHSSSADVPSRKGPLPEQVLSEPISALGDRTVSADVPDTEHNIAKCQRDREEQTQELSGHHDSSEADGEVRKSEDGIVSNNDGTRDKGRISGDSEKNPDDVRLKKSRTYLLLLAILAVSLTYQAGINPPGGFWTSNTPSHSAGDPILEDNFHKRYLAFFYFNAIAFLASLVMLIMLLNRKMSNKVIKRRALQTAMITDLLALLGAFVVGSCREKTKSIYISVVIFFVVVAYTFLHVLASKYAVPEQWKQLFKRRQDVLQEHHVDNDAKDAHEKDLERRRNLLFILAILTATFFKIAIQSVMMFSTIQMLSFVSSVAVIILLVNRESCEHGIKSYALRVCLIAGLLGLLIAYSAGSFRKVKSIGCLIIITAAVLICLLIQVLVLSSTNDALEPPARSGRWLQKFFGLADSQKSLASPGQSKNESDKSDPLINEKKEKRHKYLMLLAILAASIAYQAGLNPPGGFWSEDSRDGYKAGNPLLKDIHSRRYMVFYVSNSISFMASIAVIMLLLSKSVRKNKVPLQALFLIMILDLLALMTAYAAGSCRKIRKVKENDCSCVDFLHFSRTLSSSAIPNARGSLRVAKRKGTWDGIDAHNSHQDIAKYCKWSCSQRMLP |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_06g0011870 | OsKeNa_06g0011870.01 | Chr06 | 10260324 | 10275961 | - | NAM | ||
| CDS seq | atggagtatgcggtgagctcaccaagtacggagtactggagtagtggagcctaccccatgcggccgtgcctcgtggagccccacccaccactcagccctgtgacgagacgagacaacgacgacgacgcgaattgggtcttttgtttactgcagcgattgctcatcaaggcggcggaccagtcgacgacgaccccggcggccggcgaggatgggtccacagatcgatgccgaccgggcacgagactgccccaactcacgccgcccacccccgcccGcctgttcgacggaacgccaaaggcggggacgagggggtcgcccccgcagtccacgcccgcaaggtgtgatgtgaaaatagtatattatatcatcaagggaagtcttacctactgctcctcagactcgcaatctcagatattgaggaaccacatggaaaatggaaggcaacccaagctcaccattgctctgaccaataccacagatgtcctaataccagtcaatggacagagtgaagaaaacaacaccaatggggatagggcagagtatggcatggaaactggcagcgacaggcaagactccatgaatggtttgtccagtaggtttttattggccagtagccatgcacccagcatcacagttgattttgagctcttgtggagactgcggaagtaccttgtaatgcttgcaatcttagcagtcagtgtgacatataatgctggattaaccccaccgggtggatttcggacaaaaaacACgactaatggacgtgatgctggtgaacctctccttcgtgtttacttcttcccacggtatgaggtattcttttactgcaatgcaacagcctttgctgcatctcttgtcttaatcatattgcttctaagtaagagtgtgacgaggcagaatttgtggctccgttcaatgcaatttaccatgatattagacctattcagcttgatgggagcctatgctgctggaagctgcagggcagtaaagtcttccatttatatatgggtcctagttgttgctgttttcatatatgttggaattcacattttgttatgcacaaggatatttccaaaAtggttgaaagagagagtacaaatgctgctacagaaaattcaagcaaagtggggtgtacatgaggagaacaggagcaacgatcaaaaaAgaaacattgaggaggctcgcaagttcattttgacacttgcaactttttctgcaactatcacttaccaagcaggattaagtccaccaggtggtttttggactgaaggcagcagtcatccagcaacccctattcttcggagtaactatcttcttcggtataattttttcatgagttgcaatgcaacttcatttgtggcatctttggtcacaatcatgttgcttcttagcccagaattgagcatgcatggaataagatctaaagcagttattgtgtgtgtggtagctgacctattgggcctgataggtgcgtatgctgcaggaagctgtagagatatagcagtttctttctatgttatgtctgtttccatcatagtcttgacctgctttgtggttttggctggaatcttggtttacaaacctgtcgcagattggctacaaaagatcaaaccagacactctgacatgcattggtacaattggccgggttttttcattggattttaagagaaacagatcaattgatagagaacaagaaaattctcaagcaaatcatctgcaaacggagcttgaaccagatgcacaagtaaaagaaaatgctctgcaaagtacagatattgaagagggagagtcacatgcgaagaatcagccttctggcgaatgtcaatctgcaaattccgaggaggctgagcctgactctgaccatccatcggccagttatcagcaatctatgtgtagcacagatgttgtgtacaacctgcagggtcagtctatagacgaccaagcccaaccaaccgcagaggaatctatatccagcacacagcacccatctgaaaaaagtcaacatgctacaaactataaggacggtatgcatcaatctgcagacaatcagcaagatgcaaatacaaaggaaaattcttcatcaatcgatgatttcaagacacttaaggatggtatttctgaccctgagcctcaatctgcagatagccatcaagttacagatatgaaggaacaatccacaatgactaacgacttaaagactacagatactgaaggcagtatgcctgaccctgacaatcgatctacagacagccagcatgttataaataaaatggaacaatcttcgtcgactgatgaacctgggactgttgttacaccagaagagaaagtatctcctaatgtgcctgtgggacatagtgagattgaaattgctgaagataataaaattgctccacatgttgagaatggctatattgacaagaatgaaagatctcccaatgaagatggcaatagaaatcaaactgctaagcatctgaagaagtgccgcacatatctactcctccttgcgattcttgcagtatctctgacataccaatcaggtctgaatccaccaggcggcttctggacaagacacgaggattatcattcatctggtgatcacatccttgaggacactcaccaccctcgctatattgcattcttctatctaaatgcaattgcctttgttgcatccgttgtcatgatcattatgctcctgaacagaagaatggccaacaaggttataaaacggcgtgcactgcagatagcaatgatagtgatcctcctgtccttaacaggggcttatgttatgggaagctgtaggaagacaaagaattcagtttatatctcagtgatggtactcctcgtgcttgcttatgttggtattcatgttttgatagcaattcatgtaatcccagaaggttggaaaaggcaggtggcagaaaagctaaaccgcctctcgtgcagacatttgtggtcgcctctccatggcagcaaccagacagggcatggcaatgagaaggattgggagcgaaggcgcaatctactattgattctttctattctcgctgcgactgtcacataccaagctggcatgaaccctccaggaagtgtgtggtctgatgacaaggatatcaaccgcacccttacaggcaacccagtccttcaggagaacaatttaagacgctataatgtgttctactactcaaattcagtctcattcgtgtcatctgttgtcatcacaatactactcgtgaacaagggatcctgtgagcatggtatgaagttctatgcattgcgagtgtgtttggcagcaggattggttggcctcttgattgcttatgctgcaggaagctgcaggaaagcaaaacaatctatttatctcatcatcgttgctgttgcagttctgatctcccttatgattcaagtcttcattatgtcttcaacatatgataaactaggaaagccattgtgcaagtgtatggaaagtttgcttgagtggatttttcagactaaggaggttaggcaagatattggttctgagatccaaggaagtccagatcctggtgacaaaagtgaaagaaaaagacacaagtatctgatgttgctttcaattttggcggcctccatcacataccaagctggtctgaacccacctggtggcttctggtcggatgacagttcagatcccccaaaacacaaggctggcgacccagtccttcataatattcatccccatcgctacaaagcattcttctgcttcaatgcattctccttcatgtcatccattgttgtgatcatgcttctgctgagcaaatctgtcagggagaagaatgtaccacttggggtattgcacttgatcatgatactagatttgctggctctcatgacggctttcgctgcgggaagctgcaggaaattcaggacctcagtttatgtctatggtctagtaatcggtgtcacaatataccttctgttggtgaccattttagcaagtagcatcgcgaaatgtctgagatcaaggaagataagtaagaattcctatgagaagcatcatgaacatccttcaagagtaaacacactgccacttaaacaacaagataaagaacagctgagacctgcaacccatgtccagtag
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| Protein seq | MEYAVSSPSTEYWSSGAYPMRPCLVEPHPPLSPVTRRDNDDDANWVFCLLQRLLIKAADQSTTTPAAGEDGSTDRCRPGTRLPQLTPPTPARLFDGTPKAGTRGSPPQSTPARCDVKIVYYIIKGSLTYCSSDSQSQILRNHMENGRQPKLTIALTNTTDVLIPVNGQSEENNTNGDRAEYGMETGSDRQDSMNGLSSRFLLASSHAPSITVDFELLWRLRKYLVMLAILAVSVTYNAGLTPPGGFRTKNTTNGRDAGEPLLRVYFFPRYEVFFYCNATAFAASLVLIILLLSKSVTRQNLWLRSMQFTMILDLFSLMGAYAAGSCRAVKSSIYIWVLVVAVFIYVGIHILLCTRIFPKWLKERVQMLLQKIQAKWGVHEENRSNDQKRNIEEARKFILTLATFSATITYQAGLSPPGGFWTEGSSHPATPILRSNYLLRYNFFMSCNATSFVASLVTIMLLLSPELSMHGIRSKAVIVCVVADLLGLIGAYAAGSCRDIAVSFYVMSVSIIVLTCFVVLAGILVYKPVADWLQKIKPDTLTCIGTIGRVFSLDFKRNRSIDREQENSQANHLQTELEPDAQVKENALQSTDIEEGESHAKNQPSGECQSANSEEAEPDSDHPSASYQQSMCSTDVVYNLQGQSIDDQAQPTAEESISSTQHPSEKSQHATNYKDGMHQSADNQQDANTKENSSSIDDFKTLKDGISDPEPQSADSHQVTDMKEQSTMTNDLKTTDTEGSMPDPDNRSTDSQHVINKMEQSSSTDEPGTVVTPEEKVSPNVPVGHSEIEIAEDNKIAPHVENGYIDKNERSPNEDGNRNQTAKHLKKCRTYLLLLAILAVSLTYQSGLNPPGGFWTRHEDYHSSGDHILEDTHHPRYIAFFYLNAIAFVASVVMIIMLLNRRMANKVIKRRALQIAMIVILLSLTGAYVMGSCRKTKNSVYISVMVLLVLAYVGIHVLIAIHVIPEGWKRQVAEKLNRLSCRHLWSPLHGSNQTGHGNEKDWERRRNLLLILSILAATVTYQAGMNPPGSVWSDDKDINRTLTGNPVLQENNLRRYNVFYYSNSVSFVSSVVITILLVNKGSCEHGMKFYALRVCLAAGLVGLLIAYAAGSCRKAKQSIYLIIVAVAVLISLMIQVFIMSSTYDKLGKPLCKCMESLLEWIFQTKEVRQDIGSEIQGSPDPGDKSERKRHKYLMLLSILAASITYQAGLNPPGGFWSDDSSDPPKHKAGDPVLHNIHPHRYKAFFCFNAFSFMSSIVVIMLLLSKSVREKNVPLGVLHLIMILDLLALMTAFAAGSCRKFRTSVYVYGLVIGVTIYLLLVTILASSIAKCLRSRKISKNSYEKHHEHPSRVNTLPLKQQDKEQLRPATHVQ
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_06g0011870 | OsKeNa_06g0011870.02 | Chr06 | 10244342 | 10260316 | - | NAM | ||
| CDS seq | atggcaaatggcacgagccaagacgataacattgagggtaattttaagctattgtggagtttacggaagtatttgatactgcttggaaccatagcagtcggtgtgacatacaatgctggattaacaccaccagggggatttTggacactaaataaggataagcaccaggctggtaatcctgttcttcctgttggttactttcaacggtatgaggtattcttttactgcaatgcaacggcctttgctgcatctcttgtcttaatcatcttgcttctaagtaagagtgcaaccaagcatgtgttgtggctccggtcaatgcaatttaccatgatactggacctattcagcctgatgggggcttatgctgcaggaagctgcagggcacttaagtcatccatttatacctggattctagtttTTgctgttttcttgtatgttggggtacatgtcctagtattcatgagggttattccagataagttgaaagagatgatacagaaattatggggtgtccacgacaggcaaagtgacagacatcaagacaaagatgttgaggatgctcgcaagttcatcttgattcttgtaacatttactgctactgtcacataccaagcaggtttgagtccaccaggtggcttttgggctgaaaatgagtatgatccgcttagtaagctgcctccagcctttcctccttacaagcaccagccagctacttctgttcttcgcacttctttggtcacagtcatattgcttctgagcacagaattgagcaaacatgggataaggtccaaagcagtcattaatttcaaaaaagtgagtctgcggtgtgtgagtgcaacgggttggatgctctcatcgagctccaggagcaacggattcagtaatggagatcataaccatgacactgagattgttggcaccaatgatgatactgaacctgttgctaatggccatattcacagcaaccaagcagcaccaattcaaaatgttaatggcaatcaaattgaggagcacttgaataaggcccgcaaaaatctgctgcttcttgccattcttgcagtatccctgacatatcaatcaggtctgaatccaccaggtggcttctggtcaggaaatgaattccgtcatgcagacggtgatcacatccttgaagaataccatcattcagctggtgatcgcattcttgaggacacataccattcccgctttattgcattcttttatctcaacgcagtggcctttgtggcatctgttgttatgatcattttgctcttgaacaaggtgatgatcatgaaggttacaaaacagtgtacattgcagatagtcatgattgtgaatctcctttccctgactggagcatttgttatggggagctgcagggaagcaaataagtccatttatatatcagtgttactctgtctggtacttgcctacgttcttgttcatgttctaatagcaatacatgttctatgtggaatggcatcgccggcatcatctgtgtcaccgcagaaccgaaCAgaggatactaaggagttggggaggaggcgtaatctactattgacactttcagttctagctgcaactgtcacataccaagctggcatgaatcctccaggaggtgtatggtctgatgacaaggatgtcagtggcaagccaggcaatccgatcctccaggacacccacccaaaacgctatgatgtgttctattactcaaattcactatcctttgtgtcttctgtagttaccacaatactacttgtgaacaaggaatcctgtgagcatgggataaaatcgcatgcattgcgagtgtgtttggtggtgggcttggttggcctcttaatcgcctatgctgctggaagttgcaggaaagcaatacagtctatttatctgatcatcattgctgttgcagttttgatctccgttgtgattcaagtctttctactctcttcaacaaatagtaatacactgcagacgtttttgtcaatacgggatgtcaatcaagacagttcttctgggccgcaagaaagtacagatcctcaagagaaaaaagagaggaaaaggaaaaagtatctgatgctgctttcagttttagcagcttccatagcataccaagctggtctgaatccacctggtggcttttggccggatgacggtggccacaaggctggcaatccaattcttcatgatgtgaatcataggcgctacaaaacattcttctgcttcaacgcattctccttcatgtcatcaattgttgtgatcatgcttctgctgagtagaactatcagagagaaggatgtacatattgatgtattgtacttgatcatgatacttgatttactgggtctcatgacagcttttgctgcaggaagctgcagaagattcaggacatcagtctatgtctatgggctaggtgtctctgacatgcaacctcaccgggggagtgagagcatagctgaggcggatggcggacaccctcagagtgagattgttgagagcaatagcctccctactccagaatcgcgcgatgatggtcagatggcagatgaagcagccgacatcgaaagccagcaagatagcaagatggttgaaattaaagaccaagattctggcaacagctccagcaggtcagcatcactcaatagccatgaagtcaggatcaagactgattttgtgttcttgtggaggttgcgaaagtatttgctacttcttgctgtgctagctgttagtgtcacatacaatgctggactgagtccaccagggggattttggacggacgacagccctgtccatcatgctggtgatcctctccttccatctaaattcttccagcgatatgaagcattcttttactgcaatgcaacagcctttgctgcatctctggtcttaatcatcttgcttctaagtaggggtgtggccaatcagcatttatggcttcgtgcgatgcaggttaccatgatattggacctctttagccttatgggggcctatgctgcagggagttgcagagctctaaagtcttctgtttatatattggtgctagttttatctgttttcttctatgttggaatccacattctagtattcataagggtggttccaaaatggttaaaagagggtgtacaaacatttatgcatcaaactgtacagaagctgcaaagaatgctgaagcaagttctaaccatttgtcatctccccaagaagcaaaggagcaaccaaaatgataaggaagaaatcgaggaagctcgtaagttcatattgatgctctcaacttttgctgctactatcacataccaagctggaatgagtccacctggtggcttttgggctgaaaacagtcatggctaccgtccagctacttttgttcttcgcaggcacaaccttcgccgcttcaatattttcacctgttccaatgcaacttcttttgtggcatctttggtcacaatcatattacttctgagcacagaattgagccggcatgggataaggactcaggcattgtttgtgtgtgtcatagccgaactgtttggtctgatttttgcttatgctgcaggaagctgcagggatgttgcaacatcactgtctgtgatcttcataattgttgtggttttaatatgtgccttgatccttgttatgttctttcaatccagaactgtaacaatttggatcgataatgcattgagacctagatttgaccattttctagaaatgctttcatggccacgggaaaaccggttatcagatggaaatcgagaaggacccttgtcaagttctcggcaggatacagatcatggaaatttgggtgaccaatcaactgaagatgtaaaatctgcaccaaccaatgatttggaaagcataaaagatagcatacccaatatggcaaatcaacttcatgatcagaaagataatttggccattgcaacagtacactcttcatcagcagatgtaccaagtagaaaaggtcctctgccagagcaggtcttgtccgaaccaatttcagcacttggtgatcggacagtatcagctgatgtgcctgacactgaacataatatagccaagtgccagagggatcgtgaagaacaaactcaagaactgagcggtcatcatgatagttcagaggctgatggagaagtcagaaagtcggaggatggcattgtgagcaataatgatggcacaagggataaaggtagaatcagtggtgacagcgagaaaaacccagatgatgttcgtcttaagaagtcacgcacatacctattgcttcttgcaattcttgcagtgtccttgacatatcaggcgggtataaatccaccaggtggcttttggacatcaaatacccctagtcactcagctggtgatcccatccttgaggataatttccataagagataccttgcattcttttatttcaacgcgattgcctttctagcttctcttgtcatgctcattatgctcctgaacaggaagatgagcaacaaggttataaaacgccgtgcactacaaacggcgatgataactgacttacttgctctattgggggcttttgttgttgggagctgcagggagaaaacaaagtccatttacatatcagtggtgatattttttgtagtagttgcatatacttttcttcatgttttggcttcaaagtatgcagttcctgaacagtggaaacaattgtttaagcggcgacaggatgtactacaagaacatcatgtagataatgatgcaaaggatgctcatgagaaggacttggagcggaggcgtaatttgctattcattcttgctattctaacagcaactttcttcaagatagccatccaaagcgttatgatgttttctactattcaaatgctctcatttgtgtcatctgtggctgttatcatactacttgtcaatagggaatcgtgcgagcatggaatcaagtcctacgcactgcgtgtctgcttgatagcgggtttgcttggtctcctgattgcttattctgcaggaagcttcaggaaagtaaaatcaataggttgtctcattatcataactgctgcagttctcatctgtcttttaattcaagttcttgtactgtcatcaacaaatgatgcactagaaccgccagccaggtcagggagatggttacagaagttttttgggcttgctgattctcaaaagtcactagcaagtccaggtcagtcaaaaaatgaaagtgacaagtcagatccccttatcaatgaaaagaaagaaaagaggcataagtacttgatgctgcttgcaattcttgctgcatccattgcttaccaagctggtctgaacccacccggggGtttctggtcagaggacagtcgtgatggctacaaggctggcaacccgctccttaaggacatacactccagacgctatatggtgttctatgtttctaattccatctctttcatggcatctattgctgtaatcatgcttctgctgagtaaatctgtgagaaagaataaggttccactccaagcattgttcttgatcatgatactagacctgttggctctgatgacagcttatgcagctggaagctgcagaaagataaggaaagtgaaggaaaacgattgtagctgtgttgactttctgcacttctccagaaccttatcaagttctgcaatcccaaacgcaagaggatctctgagggtagcaaaaagaaaaggaacatgggatggtatagatgcacataactcgcatcaggacatagcaaaatactgtaaatggtcctgttctcaaagaatgctgccctag
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| Protein seq | MANGTSQDDNIEGNFKLLWSLRKYLILLGTIAVGVTYNAGLTPPGGFWTLNKDKHQAGNPVLPVGYFQRYEVFFYCNATAFAASLVLIILLLSKSATKHVLWLRSMQFTMILDLFSLMGAYAAGSCRALKSSIYTWILVFAVFLYVGVHVLVFMRVIPDKLKEMIQKLWGVHDRQSDRHQDKDVEDARKFILILVTFTATVTYQAGLSPPGGFWAENEYDPLSKLPPAFPPYKHQPATSVLRTSLVTVILLLSTELSKHGIRSKAVINFKKVSLRCVSATGWMLSSSSRSNGFSNGDHNHDTEIVGTNDDTEPVANGHIHSNQAAPIQNVNGNQIEEHLNKARKNLLLLAILAVSLTYQSGLNPPGGFWSGNEFRHADGDHILEEYHHSAGDRILEDTYHSRFIAFFYLNAVAFVASVVMIILLLNKVMIMKVTKQCTLQIVMIVNLLSLTGAFVMGSCREANKSIYISVLLCLVLAYVLVHVLIAIHVLCGMASPASSVSPQNRTEDTKELGRRRNLLLTLSVLAATVTYQAGMNPPGGVWSDDKDVSGKPGNPILQDTHPKRYDVFYYSNSLSFVSSVVTTILLVNKESCEHGIKSHALRVCLVVGLVGLLIAYAAGSCRKAIQSIYLIIIAVAVLISVVIQVFLLSSTNSNTLQTFLSIRDVNQDSSSGPQESTDPQEKKERKRKKYLMLLSVLAASIAYQAGLNPPGGFWPDDGGHKAGNPILHDVNHRRYKTFFCFNAFSFMSSIVVIMLLLSRTIREKDVHIDVLYLIMILDLLGLMTAFAAGSCRRFRTSVYVYGLGVSDMQPHRGSESIAEADGGHPQSEIVESNSLPTPESRDDGQMADEAADIESQQDSKMVEIKDQDSGNSSSRSASLNSHEVRIKTDFVFLWRLRKYLLLLAVLAVSVTYNAGLSPPGGFWTDDSPVHHAGDPLLPSKFFQRYEAFFYCNATAFAASLVLIILLLSRGVANQHLWLRAMQVTMILDLFSLMGAYAAGSCRALKSSVYILVLVLSVFFYVGIHILVFIRVVPKWLKEGVQTFMHQTVQKLQRMLKQVLTICHLPKKQRSNQNDKEEIEEARKFILMLSTFAATITYQAGMSPPGGFWAENSHGYRPATFVLRRHNLRRFNIFTCSNATSFVASLVTIILLLSTELSRHGIRTQALFVCVIAELFGLIFAYAAGSCRDVATSLSVIFIIVVVLICALILVMFFQSRTVTIWIDNALRPRFDHFLEMLSWPRENRLSDGNREGPLSSSRQDTDHGNLGDQSTEDVKSAPTNDLESIKDSIPNMANQLHDQKDNLAIATVHSSSADVPSRKGPLPEQVLSEPISALGDRTVSADVPDTEHNIAKCQRDREEQTQELSGHHDSSEADGEVRKSEDGIVSNNDGTRDKGRISGDSEKNPDDVRLKKSRTYLLLLAILAVSLTYQAGINPPGGFWTSNTPSHSAGDPILEDNFHKRYLAFFYFNAIAFLASLVMLIMLLNRKMSNKVIKRRALQTAMITDLLALLGAFVVGSCREKTKSIYISVVIFFVVVAYTFLHVLASKYAVPEQWKQLFKRRQDVLQEHHVDNDAKDAHEKDLERRRNLLFILAILTATFFKIAIQSVMMFSTIQMLSFVSSVAVIILLVNRESCEHGIKSYALRVCLIAGLLGLLIAYSAGSFRKVKSIGCLIIITAAVLICLLIQVLVLSSTNDALEPPARSGRWLQKFFGLADSQKSLASPGQSKNESDKSDPLINEKKEKRHKYLMLLAILAASIAYQAGLNPPGGFWSEDSRDGYKAGNPLLKDIHSRRYMVFYVSNSISFMASIAVIMLLLSKSVRKNKVPLQALFLIMILDLLALMTAYAAGSCRKIRKVKENDCSCVDFLHFSRTLSSSAIPNARGSLRVAKRKGTWDGIDAHNSHQDIAKYCKWSCSQRMLP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.156056 | 1.828920 | 1.609057 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0293000 | RBH | 0.272482 | 0.558874 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g18880 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0292100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0011990 | RBH | 0.0 | 0.939535 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0011900 | RBH | 0.0 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0011900 | RBH | 0.0 | 2.793811 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0011950 | RBH | 0.0 | 0.076855 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0012060 | RBH | 0.357709 | 4.364165 | 0.736003 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0175300 | RBH | 0.992536 | 9.33329 | 0.760162 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0011520 | RBH | 0.0 | 0.093087 | 0.063138 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0171600 | RBH | 0.1146165 | 0.3466095 | 0.9503175 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0012090 | RBH | 0.014147 | 0.080845 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0011930 | RBH | 0.089425 | 2.502200 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0011770 | RBH | 0.0 | 6.985230 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0012140 | RBH | 0.000000 | 0.000000 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0011810 | RBH | 0.020095 | 2.943754 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G011700 | RBH | 0.0 | 1.213506 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0012040 | RBH | 0.0 | 1.049797 | 0.0 |
