Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_06g0012140 | OGI:06028900 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr06:10303519-10317732 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ctagggcagcattctttgagaacaggaccatttacagtattttgctatgtcctgagtaaacagcatgttacaaattagAaaaaaaaaaagatagggaattcaaagatagacacaggattttctctaggacaggaattaataattaaaaatgatttacctgatgcgagttatgtgcatctataccatcccatgttccttttctttttgctaccctcagagatcctcttgtgtttgggattgcagaacttgataaggttctgaatacagAaaaaaaaaaagcgtatcgcagtatcagtgaaccatagcggcaaagtcacaaaataagtacctggagaagtgcagaaagtcaacacagctacaatcgttttccttcactttccttatcttaaatatcacaggtaaagaagggaatcaggatatgtgccagtaccacatatgtatgctctgcataaaactacatagtcgatgcaaaagcttaatgcaacttgactggcagcaatatatatatagcactaaataaccaaagcttaatatcaactggaatagaagggaactagtgaagattttgttatcacaaattgcagaacctggtgatgccattctccccaagatgtacatcagttgccttttctattgggggtgtcaaaatggatggagaaatcttggcgggaaaattccattttgtcttttgaacccttctcaaaattcatttttcgatctcaactaaaagaccagttgtttttcagcctcaagtttcaaaactggacaaacaccaccttaaggcctattttatagtggttttgtttaaaacaaaggtggttttcacaagtgccaactcctattatacatattttccagacatagatgacacttagataagttcacatcaatgaaatgaaacttaattggtgtacatgcttactatcatgccaatcaaagccaccttggaatatggtttagggtgttatttacccggttttgaatgttaaccgttgagggtcaacaacaaatggtgtttttagttaagggtgaaaagtggacttcaagaagatttcaaggaccaaaatacgacttaacccaatcctgagataaaaccaacgagatgtttccccaaacctattcatgcaaaactgtccaattcattttcatgtgaacagccacctgtattataacgaacgaaaagaaaattcgcatgtttcaagcattattcatctcctcatgaaaccaatcagttacatacaactaaacatgatcaaaattctaatcatattcaaccaaggagaagaataaaaaggctgctgcgtctggaatcttatctccctaaatgaaaaatgttgaatattttgttcagcaacaaagaacatcatatcctgtagtcctgaacaaaaaccaaagacatgattttcatctaaaatacaaagacatcacaacagtggcaaaaaggagtttttttttttcaacaacctgcaagacgttcgcacatcatagcattaagaagtaaaagaatggggcagacaattgagaacatgtgcgactactgccccctagccaaacttgggaaacaactaaaacgaaatgacaagcacactgaactattcaaaatgacttaagagaacttatatgtgatacaagacacagtctacctccacctattactgtccttttgatttcttgaaccaaatgatcaaggaatttgaaaacattgttccaacaatctgctcagctccttgttattttgttactccttgttattctccagcacagaggccacctacctttcctttctttcagccattttgcgataccactcaataaaataattacaatcataaggtatagcaccaccccgcatactaccaagaagacaaatattgatgttctgacctttctgcagcttccagctgcataagctgtcatcagagccaacaggtctagtatcatgatcaagaacaatgcttggagtggaaccttattctttctcacagatttactcagcagaagcatgattacagcaatagatgccatgaaagagatggaattagaaacatagaacaccatatagcgtctggagtgtatgtccttaaggagcgggttgccagccttgtagccatcacgactgtcctctgaccagaaacccccgggtgggttcagaccagcttggtaagcaatggatgcagcaagaattgcaagcagcatcaagtacttatgcctcttttctttcttttcattgataaggggatctgacttgtcactttcattttttgactgacctggacttgctagtgacttttgagaatcagcaagcccaaaaatcttctgtaaccatctccctgacctggctggcggttctagtgcatcatttgttgatgacagtacaagaacttgaattaaaagacagatgagaactgcagcagttatgataatgagataacctattgattttactttcctgaagcttcctgcagaataagcaatcaggagaccaagcaaacccgctatcaagcagacacgcagtgcgtaggacttgattccatgctcgcacgattccctattgacaagtagtatgataacagccacagatgacacaaatgagagagcatttgaatagtagaaaacatcataacgctttggatggctatcttgaagaactggattgccaggtttgccactcccatcaggccaaatgccacctggagggttcaggccagcttgatatgtgacagttgctgttagaatagcaagaatgaatagcaaattacgcctccgctccaagtccttctcatgagcatcctttgcatcattatctacatgatgttcttgtagtacatcctgtcgccgcttaaacaattgtttccactgttcaggaactgcatactttgaagccaaaacatgaagaaaagtatatgcaactactacaaaaaatatcaccactgatatgtaaatggactttgttttctccctgcagctcccaacaacaaaagcccccaatagagcaagtaagtcagttatcatcgccgtttgtagtgcacggcgttttataaccttgttgctcatcttcctgttcaggagcataatgagcatgacaagagaagctagaaaggcaatcgcgttgaaataaaagaatgcaaggtatctcttatggtaattatcctcaaggatgggatcaccagctgagtgactaggggtatttgatgtccaaaagccacctggtggatttatacccgcctgatatgtcaaggacactgcaagaattgcaagaagcaataggtatgtgcgtgacttcttaagacgaacatcatctgggtttttctcgctgtcaccactgattctacctttatcccttgtgccatcattattgctcacaatgccatcctccgactttctgacttctccatcagcctctgaactatcatgatgaccgctcagttcttgagtttgttcttcacgatccctctggcacttggctatattatgttcagtgtcaggcacatcagctgatactgtccgatcaccaagtgctgaaattggttcggacaagacctgctctggcagaggaccttttctacttggtacatctgctgatgaagagtgtactgttgcaatggccaaattatctttctgatcatgaagttgatttgccatattgggtatgctatcttttatgctttccaaatcattggttggtgcagattttacatcttcagttgattggtcacccaaatttccatgatctgtatcctgccgagaacttgacaagggtccttctcgatttccatctgataaccggttttcccgtggccatgaaagcatttctagaaaatggtcaaatctaggtctcaatgcattatcgatccaaattgttacagttctggattgaaagaacataacaaggatcaaggcacatattaaaaccacaacaattatgaagatcacagacagtgatgttgcaacatccctgcagcttcctgcagcataagcaaaaatcagaccaaacagttcggctatgacacacacaaacaatgcctgagtccttatcccatgccggctcaattctgtgctcagaagtaatatgattgtgaccaaagatgccacaaaagaagttgcattggaacaggtgaaaatattgaagcggcgaaggttgtgcctgcgaagaacaaaagtagctggacggtagccatgactgttttcagcccaaaagccaccaggtggactcattccagcttggtatgtgatagtagcagcaaaagttgagagcatcaatatgaacttacgagcttcctcgatttcttccttatcattttggttgctcctttgcttcttggggagatgacaaatggttagaacttgcttcagcattctttgcagcttctgtacagtttgatgcataaatgtttgtacaccctcttttaaccattttggaaccacccttatgaatactagaatgtggattccaacatagaagaaaacagataaaactagcaccaatatataaacagaagactttagagctctgcaactccctgcagcataggcccccataaggctaaagaggtccaatatcatggtaacctgcatcgcacgaagccataaatgctgattggccacacccctacttagaagcaagatgattaagaccagagatgcagcaaaggctgttgcattgcagtaaaagaatgcttcatatcgctggaagaatttagatggaaggagaggatcaccagcatgatggacagggctgtcgtccgtccaaaatccccctggtggactcagtccagcattgtatgtgacactaacagctagcacagcaagaagtagcaaatactttcgcaacctccacaagaacacaaaatcagtcttgatcctgacttcatggctattgagtgatgctgacctgctggagctgttgccagaatcttggtctttaatttcaaccatcttgctatcttgctggctttcgatgtcggctgcttcatctgccatctgaccatcatcgcgcgattctggagtagggaggctattgctctcaacaatctcactctgagggtgtccgccatccgcctcagctatgctctcactCccccggtgaggttgcatgtcagagacaccctccgtcattgcattctatctgatgcacgacggctcctcagaaaagtgaaattggtttcaggattcgatggtagctcaatggtggtgaagaacaacaagaacagagatattgtgaacgatacaaaggagacaaagagagaagacctgctgaagtcaatgaccaaacaatgagaggcacaagagggttggcgcatgggactgcttgcttgaccccacggcaatagcaatgttttgttttctagcagcttgcccaagttactataaagaaattgagtgagacatgtaaacttgtaaatgactaataagttggaaccgatcaatgatgagaatccacaccagcctggctggtattgacactaataaaagcatcacagggtcaccttggagttagacccgtgctagtatatacaagcccactaaaaccagcattagtaaaaggaaacatggtacaaataaactaatgccatgTtgatcttatcatgtcccaaactaaataccagtgattagcacaaaaataattggttgctaggattcctgaagatatacttttcctctcctttttttacacaactcctaaatagataatccagggtcaccatagatgaattggaaggtgtactctactatgtcaaattggcaacagtaagtagcaacgtattatcaacctatcccagcactgaagtttgagactatgagaggcgtgcagtggaacaatataccttcacacgagaaacatcagacatcgccgtgctcaagtacagttcagtctgtaccccagcaatttccagccaagcgtgcgcgctccaagaaacgcctcccggggcacaagcaacccacggctgtagagtgcagaccccggagtcagggccgccggctcaggcaatgcgtcgaacacctcgcgtcctcgcgcggccttactgccggcagctcagctcgggccagcatttcgtcgaagaccacgactgcaggtacaaggcaaacgagttgcaatacctccgacgacgctccgaccgtgttgcggtgtcaggtctcccgccggagttgtcctcaccggcgtcgtcggctcgtcgccgttacctaggcgtggcttcgcgactccccagttccccactagccaacttttttttttaagacgccactagcggaaggaaagcgtggagggatattcctgaatgaataaaatatgacgattcagtttctaggccctgtctggttctattgactaatgtttagtcctcactttttagcctcaaattagctcttaaggatccaaacaggtggcctaattttgagctaatgtgaattagcccccctcaaaacattagcccctccaaagggtgctaatggagctaattttgtgtggggaccatcaaaaaacagctttctctctcattctctctcctctctttatactctctcttcaccttttagccttgaattagcccatgggtccaaacataccaccctaggctaatatttagcatatcaattcatgactaaacattagctctcaaaattagccctgggctaatcttccaaacagggcctaggatgattagttgagcgaatatttcacgaagatgttggacgagagtattcggccaaattagctactacctccgttttatattataagaTtttctagcatcgtccatatctattaacttatcgaaggaatagaaaaaagagcctccacgttcgctctcacggccaagaaatttccacattaatcgaagaaaaagaaaaatagagtccatatagaaatacaatttagaaatagttaaaattcggaattaaaaataaggaatattgaaagaggagactagagtctatatagaaatacaattaagaaacaatagaaattcagaattaaaataaggaatatcagaagtagagtatagagtccatatagaaatacaattaagaaataatagaaattcggaattaaaataaggaatattagaagtagagtatagagtccatatagaaatacaattaagaaataatagaaattcagaattaaaaataaggaatattagaagtagagtatagatccatacagaaatacaattaagAaataatagaaattcgaaattaaaaataaggaatatttgaagtagaggatagtgtccatatagtaatacaattaagaaatgatagatattcggaattaaaaataaggaatattagaagtagagcatagagtccatatgaaatacaattaagaaataatagAaattcgaaattaaaaataaagaatattagaagtagagtatagagtctatataggaatttaaaactaactaaaatttggaataaacataataaaattaaaagtagaatttagagttcgtataaaaatacaatttacaaatgactaaaattcgaaatttaaaaaaacatgtgaagaagaatctaaagtcaatacaagaacacgattagaagtaactgaaattcaaaattaaaaattaaagaatattgaaagatgagtttagagtctacgtagaaatacaattagaaataataaaaattcagaattaaaaataaataatattggaagaagagcctatagtctatatagaaatacagataacgaaagttcataattaaaaaaaaggaaatattgaaagacaagtctagagtccatataggaatataatttacaaataactaaaatttgatattaaaaataattagtaactaacacgtatataaaatacaatatgaatattacacattagtagtttcgtaaagttagtacaaaatctaaaattatattgtcattttaatatatttaaataatacgttaataaaacatatatgctattatatgagaaaaaaatataatgatgctagtcgcgcaatctgcgtggaccaccatgccagtttatatatatgttaatgaatctagacatacatatgaaacgattcattaacatatatataaatgtgggtgatgctaaaaagtcttataatatgaaatgaaggagtagatgagaatattaatctttgctaatcttgtaatagattattaataatcaatacattttgttattgatatgtaattaacttatcaaaactagcgttgattagatataattagtactccctccgtttcaggttataagtcaaactgctttaagtttgactaagtttatgaacaaatatagtaatatttacattatcaaattattttttattaattaatagttaaatatattttttttataataaatttatcttgggtcgaaaatatcactgttttttctataaacttggtcaaatttgaagcagtttgactttgaccagtcaaaacaccttataacctaaaacagagggagtatattttattgttaattagaatagattatggatgtattaataaaaattaatatattttattattaactaatatgttattgttttcattctacttattttcgttcatctaactaaataagaaactggaagaccatatctacctagccaaacaaaaaaacaacaccacaaatatccatataaatatggatgaccacaatatccaaacacaccctaaattattataattattatattaATTatatatatatatatatatatatatatatattgtattaatatgtagtaatatattacttcataaatacgcaagtttaaatttgAaaactactacgaattgtaacaaacataacagattaaactataatcactctattcattttctatttctatttttgttatgattttatagaagttgaaatttgaacttttatatttgtggagtgagtaaatttcataaactacagatttaacaataaacacaaaactacgggtttaaggctaagtatgaaaaagctacatatttcgtaataaagttatcacaaaatatagattttgtggtttaaattattatagttgaggtataaacgttcaagttttgtgattaaattgacgctatacctgtagttttgcgataactttgttacaatatctgtagtttcgagatgcttcacctcaaatctgtagctttctgataaatttgatgttaaatctgtaTttttatgatgcgttttaaatctatacttttgtgacagtttggtcaatatatttgtagttttgcaaaatttactcattacatattaatctatgctattaatttgtttaattttattaaaatcatttagttgacatgtaatAaataaatgtacgccatttgagtgattagaaTCtctctccatggcacattgcatacttctctctagctcaacgggcccaaaacagcaacccccttgcgtccctggacacagccctccatccagtcaccacccagccatttttcctctatcagatagtagtatactagtacaactacaaatcgatcaacttcaaaagcactactaaacagtggcggagcctgtatgaaattatagcgggggctaaaccaagatttagggttgggttaggatttttttttggccttctaacaacctcaaacaaggtctatattagcccctcatctattaatatatggattagaattttaagggtattatgggggctataatggtatatttagggtagggggtcttagaccccccgcccccacgctgtctccacccctgctactaaatacttcctccgtttcacaatgtaaaactttttagcattgctcaaattcatctagatgttaatgaatctagatatctgtttcacaatgtaaaaatttcatatctagatatatatgtgtgtctagattcattaatatctatatgaatgtggtcaatgttaaaaagtcttatattgtgaaacggaggaagtagtatttactgtactactcctatacatgtgagccatagtagatctgtaacagtgatcttctgtaaattaagattagcagttcgcaatgtcgcgtgcctttttatgatcattgagatgagggcaacctctctcatccgatcatcgtaggcattgtccagcggttggctcggctcattggccacgcccaagaagaagcaaccagcagaggcgcagaacccctcccctgtgatgttctattgctctgtgcgtgtgtcgtttggtaggggagggtggcgctggcgtagttaggagtggacattcgatctgattgaaaatttcggtcttaatctttggtctttcggttattttagtctttgaaaagtgatgaccgaatttcaacgcaaatatgtcaggaccgacaaattcggtctcagttctgaccgaaatttaacaatAttttcatatatAaaaaaaaataatgaaaattttcaacacaaaaatcacaaaaaaatttgtaagcatgtatgagtaaaaactcctattaggttgcatgtatagaagaagtaaggatgtgaaaattagagtttaatcctattgaatttggtggattgtatgttgcatttatatatttttttattaattcggtcttttcagtctattcggttaatcgagaaaactaaccaaattgaccaaacaaaattctatctttcactgtctagcaccgaatttcttggtctcggtctcaatcttttgattcggtctttttctgcgcaccctagtcgcagtagcagcaagcgagcattgcagcaaaacatcacacggccatggcgtgcagtgaagtggagtactactggtggtggcattggtcacacgggttttatgactgtttgtgaaaagccacgcacattgctagccaccggctaggggtgggcagatttagaccgaactgaaaagaccgagaccAaaaaattcagttaactgttcggtcccagcaatcgaaagactgaatttattttggtcatttcgattattgggctcagtaggtctaggacgcctaataagcccattagtactaaccctagaagtgatacaaccctaccggtcagctaccactgccgcacgcctgcactctcatcgcaccgcatccccatcgtctctctctcggcctccgcctccccaccgcgccggcgccgcctctcccttcacgtcgacgccgcctccgttctccaccgcgccgcggccaccgcctccgccctccactgcgcctgcgccggcgccgcctccgccctccaccgcaccagcaccgcctctgtcctccaccgcgccgtggccgccacctccacctcggcgctgcctccagccagcctgcctccgcctcgacgccatctccagcgcaagtatttttgtgacctcgacgatttggttatatttggttgtggctctgatttgaatccagtgcatttggttgtatttttgtgatatatatctatgAaaaaatatctcaaaagaggggaagtgttgtaaaaatttcattccaaacttactcctaaaaaatttcggtcagaccaagactgaaactaaaTttgccggtcctgagttttttaggatgaaattcagtcctagattttcaaagaccgaaataaccgaaaaaccgaagaccgagactgaattttcagtctgaaccgaatgcccacccctaccactggcagcttggaccgccagccagccaggcgcctgctgcccgctggttgctactactgcgggacacgccacttcataaaacggcccagctcgctctgcctgctgcttgcgtttctctcgtgaaatctgctgtgaaaatcctctcgcctcctccatccatcgtgcaaaacagccacgagagagagagaggagagagaaaccgagtcactgcctgccaagccagccagccagccagcctactgcatttaaaCccccactcttccaagaggagaggggaagaacacaacacaacaacaacaacaggtgaagcgagagagagatggtgattccccgggctccaactgcacaaggttaaaaaatacattaataatttattttttgaaagaaatttatcgattatattcagttgtacctgaaaaactagccctacattttgcttaaagaaaaacacaagatctgaacggtaaaaagctgtttcaacccaacaacattctcaatttcccatttaagtaattaaactaattctgataaaaatccaatagaactcctgtgttcgaaatgatgctatccgaaagattactaacaaactaaaagagctttcaactggaaagcacacaatacataaaaatcgccacacaagactcgatatattaattctgcaaacacacaatacactagtaggctatcgtttaccaaatgtttatataggcaatattttttgcacaaagcaacagggataaatcaaaattgctgtcttggtgatactgatgtactatatagtcacaagcaccaaaatatccataaagcacgcatatgtaagccaatcaaataactaattccataacattaatatctcacccatgtgtggttggtacttcatcataacagaaaaattcaagagaaagcagaataaaaagaaagagctaactttcagagttataataatcgcaaaacctgagactaccaacattttaagcagtttagctgtagtaaaacaaaggacggataacagaaaatcataataaacacttcttacattacagatacttgctgaaagatcagtctgataaccataccaaacttctatggcacaattatacaactttctgcaagatcgaaccacagagtaccagatacttgtagctcaattgagaagaaatgcaagagatttaagcaagccatacatgtggtgatgtgcagcttcaggcttcattctaaaattttcaaccctgatcaaatatgtcaaatagcatccgctgatacttttttgccgggtcggccgaaggaactggcgaccaaattccattaagattggggaaaaaagaacagtacaaagattttgtttacaacaacaaaaagctgttgagttggggcgaaggcttcccccataagctgaaagagaaaaagatttcaagttaaactgaacatgaaagaacaaatgctaagaactgaaaatgcccactatctgaagaaaaaacaaaaggtgattttcaactcattgttgttctgtgaacacaaaaaccttcaaacttgatgttcaggcattgggtgtgtctgctcttgaagcattttcaggatggtcctgagaaggaatttgaaccttcctcgatctcagatattttgcaattccacttgataaaacggtcacaagcaaaaggtataccacaacacagattactagcccatagacatagactgatgtcctgaatcttctgcagcttcctgcagcaaaagctgtcatgagacccagtaaatcaagtatcatgatcaagtacaatacatcaatatgtacatccttctctctgatagttctactcagcagaagcatgatcacaacaattgatgacatgaaggagaatgcgttgaagcagaagaatgtttgtagcgcctatgattcacatcatgaagaattggattgccagccttgtggccaccgtcatccggccaaaagccaccaggtggattcagaccagcttggtatgctatggaagctgctaaaactgcaagcagcatcagatactttttccttttcctctcttttttctcttgaggatctgtactttcttgcggcccagaagaactgtcttgattgacatcccgtattgacaaaaacgtctgcagtgtattactatttgttgaagagagtagaaagacttgaatcacaacggagatcaaaactgcaacagcaatgatgatcagataaatagactgtattgctttcctgcaacttccagcagcataggcgattaagaggccaaccaagcccaccaccaaacacactcgcaatgcatgcgattttatcccatgctcacaggattccttgttcacaagtagtattgtggtaactacagaagacacaaaggatagtgaatttgagtaatagaacacatcatagcgttttgggtgggtgtcctggaggatcggattgcctggcttgccactgacatccttgtcatcagaccatacacctcctggaggattcatgccagcttggtatgtgacagttgcagctagaactgaaagtgtcaatagtagattacgcctcctccccaactccttagtatcctctgttcggttctgcggtgacacagatgatgccggcgatgccat
More
|
||||||||||
| CDS seq | atggcatcgccggcatcatctgtgtcaccgcagaaccgaacagaggatactaaggagttggggaggaggcgtaatctactattgacactttcagttctagctgcaactgtcacataccaagctggcatgaatcctccaggaggtgtatggtctgatgacaaggatgtcagtggcaagccaggcaatccgatcctccaggacacccacccaaaacgctatgatgtgttctattactcaaattcactatcctttgtgtcttctgtagttaccacaatactacttgtgaacaaggaatcctgtgagcatgggataaaatcgcatgcattgcgagtgtgtttggtggtgggcttggttggcctcttaatcgcctatgctgctggaagttgcaggaaagcaatacagtctatttatctgatcatcattgctgttgcagttttgatctccgttgtgattcaagtctttctactctcttcaacaaatagtaatacactgcagacgtttttgtcaatacgggatgtcaatcaagacagttcttctgggccgcaagaaagtacagatcctcaagagaaaaaagagaggaaaaggaaaaagtatctgatgctgcttgcagttttagcagcttccatagcataccaagctggtctgaatccacctggtggcttttggccggatgacggtggccacaaggctggcaatccaattcttcatgatgcgctacaaacattcttctgcttcaacgcattctccttcatgtcatcaattgttgtgatcatgcttctgctgagtagaactatcagagagaaggatgtacatattgatgtattgtacttgatcatgatacttgatttactgggtctcatgacagcttttgctgcaggaagctgcagaagattcaggacatcagtctatgtctatgggctaggtgtctctgacatgcaacctcaccggggGagtgagagcatagctgaggcggatggcggacaccctcagagtgagattgttgagagcaatagcctccctactccagaatcgcgcgatgatggtcagatggcagatgaagcagccgacatcgaaagccagcaagatagcaagatggttgaaattaaagaccaagattctggcaacagctccagcaggtcagcatcactcaatagccatgaagtcaggatcaagactgattttgtgttcttgtggaggttgcgaaagtatttgctacttcttgctgtgctagctgttagtgtcacatacaatgctggactgagtccaccagggggattttggacggacgacagccctgtccatcatgctggtgatcctctccttccatctaaattcttccagcgatatgaagcattcttttactgcaatgcaacagcctttgctgcatctctggtcttaatcatcttgcttctaagtaggggtgtggccaatcagcatttatggcttcgtgcgatgcaggttaccatgatattggacctctttagccttatgggggcctatgctgcagggagttgcagagctctaaagtcttctgtttatatattggtgctagttttatctgttttcttctatgttggaatccacattctagtattcataagggtggttccaaaatggttaaaagagggtgtacaaacatttatgcatcaaactgtacagaagctgcaaagaatgctgaagcaagttctaaccatttgtcatctccccaagaagcaaaggagcaaccaaaatgataaggaagaaatcgaggaagctcgtaagttcatattgatgctctcaacttttgctgctactatcacataccaagctggaatgagtccacctggtggcttttgggctgaaaacagtcatggctaccgtccagctacttttgttcttcgcaggcacaaccttcgccgcttcaatattttcacctgttccaatgcaacttcttttgtggcatctttggtcacaatcatattacttctgagcacagaattgagccggcatgggataaggactcaggcattgtttgtgtgtgtcatagccgaactgtttggtctgatttttgcttatgctgcaggaagctgcagggatgttgcaacatcactgtctgtgatcttcataattgttgtggttttaatatgtgccttgatccttgttatgttctttcaatccagaactgtaacaatttggatcgataatgcattgagacctagatttgaccattttctagaaatgctttcatggccacgggaaaaccggttatcagatggaaatcgagaaggacccttgtcaagttctcggcaggatacagatcatggaaatttgggtgaccaatcaactgaagatgtaaaatctgcaccaaccaatgatttggaaagcataaaagatagcatacccaatatggcaaatcaacttcatgatcagaaagataatttggccattgcaacagtacactcttcatcagcagatgtaccaagtagaaaaggtcctctgccagagcaggtcttgtccgaaccaatttcagcacttggtgatcggacagtatcagctgatgtgcctgacactgaacataatatagccaagtgccagagggatcgtgaagaacaaactcaagaactgagcggtcatcatgatagttcagaggctgatggagaagtcagaaagtcggaggatggcattgtgagcaataatgatggcacaagggataaaggtagaatcagtggtgacagcgagaaaaacccagatgatgttcgtcttaagaagtcacgcacatacctattgcttcttgcaattcttgcagtgtccttgacatatcaggcgggtataaatccaccaggtggcttttggacatcaaatacccctagtcactcagctggtgatcccatccttgaggataattaccataagagataccttgcattcttttatttcaacgcgattgcctttctagcttctcttgtcatgctcattatgctcctgaacaggaagatgagcaacaaggttataaaacgccgtgcactacaaacggcgatgataactgacttacttgctctattgggggcttttgttgttgggagctgcagggagaaaacaaagtccatttacatatcagtggtgatattttttgtagtagttgcatatacttttcttcatgttttggcttcaaagtatgcagttcctgaacagtggaaacaattgtttaagcggcgacaggatgtactacaagaacatcatgtagataatgatgcaaaggatgctcatgagaaggacttggagcggaggcgtaatttgctattcattcttgctattctaacagcaactgtcacatatcaagctggcctgaaccctccaggtggcatttggcctgatgggagtggcaaacctggcaatccagttcttcaagatagccatccaaagcgttatgatgttttctactattcaaatgctctctcatttgtgtcatctgtggctgttatcatactacttgtcaatagggaatcgtgcgagcatggaatcaagtcctacgcactgcgtgtctgcttgatagcgggtttgcttggtctcctgattgcttattctgcaggaagcttcaggaaagtaaaatcaataggttatctcattatcataactgctgcagttctcatctgtcttttaattcaagttcttgtactgtcatcaacaaatgatgcactagaaccgccagccaggtcagggagatggttacagaagatttttgggcttgctgattctcaaaagtcactagcaagtccaggtcagtcaaaaaatgaaagtgacaagtcagatccccttatcaatgaaaagaaagaaaagaggcataagtacttgatgctgcttgcaattcttgctgcatccattgcttaccaagctggtctgaacccacccgggggtttctggtcagaggacagtcgtgatggctacaaggctggcaacccgctccttaaggacatacactccagacgctatatggtgttctatgtttctaattccatctctttcatggcatctattgctgtaatcatgcttctgctgagtaaatctgtgagaaagaataaggttccactccaagcattgttcttgatcatgatactagacctgttggctctgatgacagcttatgcagctggaagctgcagaaaggtcagaacatcaatatttgtcttcttggtagtatgcggggtggtgctataccttatgattataaggaaagtgaaggaaaacgattgtagctgtgttgactttctgcacttctccagaaccttatcaagttctgcaatcccaaacacaagaggatctctgagggtagcaaaaagaaaaggaacatgggatggtatagatgcacataactcgcatcaggacatagcaaaatactgtaaatggtcctgttctcaaagaatgctgccctag
More
|
||||||||||
| Protein seq | MASPASSVSPQNRTEDTKELGRRRNLLLTLSVLAATVTYQAGMNPPGGVWSDDKDVSGKPGNPILQDTHPKRYDVFYYSNSLSFVSSVVTTILLVNKESCEHGIKSHALRVCLVVGLVGLLIAYAAGSCRKAIQSIYLIIIAVAVLISVVIQVFLLSSTNSNTLQTFLSIRDVNQDSSSGPQESTDPQEKKERKRKKYLMLLAVLAASIAYQAGLNPPGGFWPDDGGHKAGNPILHDALQTFFCFNAFSFMSSIVVIMLLLSRTIREKDVHIDVLYLIMILDLLGLMTAFAAGSCRRFRTSVYVYGLGVSDMQPHRGSESIAEADGGHPQSEIVESNSLPTPESRDDGQMADEAADIESQQDSKMVEIKDQDSGNSSSRSASLNSHEVRIKTDFVFLWRLRKYLLLLAVLAVSVTYNAGLSPPGGFWTDDSPVHHAGDPLLPSKFFQRYEAFFYCNATAFAASLVLIILLLSRGVANQHLWLRAMQVTMILDLFSLMGAYAAGSCRALKSSVYILVLVLSVFFYVGIHILVFIRVVPKWLKEGVQTFMHQTVQKLQRMLKQVLTICHLPKKQRSNQNDKEEIEEARKFILMLSTFAATITYQAGMSPPGGFWAENSHGYRPATFVLRRHNLRRFNIFTCSNATSFVASLVTIILLLSTELSRHGIRTQALFVCVIAELFGLIFAYAAGSCRDVATSLSVIFIIVVVLICALILVMFFQSRTVTIWIDNALRPRFDHFLEMLSWPRENRLSDGNREGPLSSSRQDTDHGNLGDQSTEDVKSAPTNDLESIKDSIPNMANQLHDQKDNLAIATVHSSSADVPSRKGPLPEQVLSEPISALGDRTVSADVPDTEHNIAKCQRDREEQTQELSGHHDSSEADGEVRKSEDGIVSNNDGTRDKGRISGDSEKNPDDVRLKKSRTYLLLLAILAVSLTYQAGINPPGGFWTSNTPSHSAGDPILEDNYHKRYLAFFYFNAIAFLASLVMLIMLLNRKMSNKVIKRRALQTAMITDLLALLGAFVVGSCREKTKSIYISVVIFFVVVAYTFLHVLASKYAVPEQWKQLFKRRQDVLQEHHVDNDAKDAHEKDLERRRNLLFILAILTATVTYQAGLNPPGGIWPDGSGKPGNPVLQDSHPKRYDVFYYSNALSFVSSVAVIILLVNRESCEHGIKSYALRVCLIAGLLGLLIAYSAGSFRKVKSIGYLIIITAAVLICLLIQVLVLSSTNDALEPPARSGRWLQKIFGLADSQKSLASPGQSKNESDKSDPLINEKKEKRHKYLMLLAILAASIAYQAGLNPPGGFWSEDSRDGYKAGNPLLKDIHSRRYMVFYVSNSISFMASIAVIMLLLSKSVRKNKVPLQALFLIMILDLLALMTAYAAGSCRKVRTSIFVFLVVCGVVLYLMIIRKVKENDCSCVDFLHFSRTLSSSAIPNTRGSLRVAKRKGTWDGIDAHNSHQDIAKYCKWSCSQRMLP |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_06g0012140 | OsLiXu_06g0012140.01 | Chr06 | 10303519 | 10317732 | - | NAM | ||
| CDS seq | atggcatcgccggcatcatctgtgtcaccgcagaaccgaacagaggatactaaggagttggggaggaggcgtaatctactattgacactttcagttctagctgcaactgtcacataccaagctggcatgaatcctccaggaggtgtatggtctgatgacaaggatgtcagtggcaagccaggcaatccgatcctccaggacacccacccaaaacgctatgatgtgttctattactcaaattcactatcctttgtgtcttctgtagttaccacaatactacttgtgaacaaggaatcctgtgagcatgggataaaatcgcatgcattgcgagtgtgtttggtggtgggcttggttggcctcttaatcgcctatgctgctggaagttgcaggaaagcaatacagtctatttatctgatcatcattgctgttgcagttttgatctccgttgtgattcaagtctttctactctcttcaacaaatagtaatacactgcagacgtttttgtcaatacgggatgtcaatcaagacagttcttctgggccgcaagaaagtacagatcctcaagagaaaaaagagaggaaaaggaaaaagtatctgatgctgcttgcagttttagcagcttccatagcataccaagctggtctgaatccacctggtggcttttggccggatgacggtggccacaaggctggcaatccaattcttcatgatgcgctacaaacattcttctgcttcaacgcattctccttcatgtcatcaattgttgtgatcatgcttctgctgagtagaactatcagagagaaggatgtacatattgatgtattgtacttgatcatgatacttgatttactgggtctcatgacagcttttgctgcaggaagctgcagaagattcaggacatcagtctatgtctatgggctaggtgtctctgacatgcaacctcaccggggGagtgagagcatagctgaggcggatggcggacaccctcagagtgagattgttgagagcaatagcctccctactccagaatcgcgcgatgatggtcagatggcagatgaagcagccgacatcgaaagccagcaagatagcaagatggttgaaattaaagaccaagattctggcaacagctccagcaggtcagcatcactcaatagccatgaagtcaggatcaagactgattttgtgttcttgtggaggttgcgaaagtatttgctacttcttgctgtgctagctgttagtgtcacatacaatgctggactgagtccaccagggggattttggacggacgacagccctgtccatcatgctggtgatcctctccttccatctaaattcttccagcgatatgaagcattcttttactgcaatgcaacagcctttgctgcatctctggtcttaatcatcttgcttctaagtaggggtgtggccaatcagcatttatggcttcgtgcgatgcaggttaccatgatattggacctctttagccttatgggggcctatgctgcagggagttgcagagctctaaagtcttctgtttatatattggtgctagttttatctgttttcttctatgttggaatccacattctagtattcataagggtggttccaaaatggttaaaagagggtgtacaaacatttatgcatcaaactgtacagaagctgcaaagaatgctgaagcaagttctaaccatttgtcatctccccaagaagcaaaggagcaaccaaaatgataaggaagaaatcgaggaagctcgtaagttcatattgatgctctcaacttttgctgctactatcacataccaagctggaatgagtccacctggtggcttttgggctgaaaacagtcatggctaccgtccagctacttttgttcttcgcaggcacaaccttcgccgcttcaatattttcacctgttccaatgcaacttcttttgtggcatctttggtcacaatcatattacttctgagcacagaattgagccggcatgggataaggactcaggcattgtttgtgtgtgtcatagccgaactgtttggtctgatttttgcttatgctgcaggaagctgcagggatgttgcaacatcactgtctgtgatcttcataattgttgtggttttaatatgtgccttgatccttgttatgttctttcaatccagaactgtaacaatttggatcgataatgcattgagacctagatttgaccattttctagaaatgctttcatggccacgggaaaaccggttatcagatggaaatcgagaaggacccttgtcaagttctcggcaggatacagatcatggaaatttgggtgaccaatcaactgaagatgtaaaatctgcaccaaccaatgatttggaaagcataaaagatagcatacccaatatggcaaatcaacttcatgatcagaaagataatttggccattgcaacagtacactcttcatcagcagatgtaccaagtagaaaaggtcctctgccagagcaggtcttgtccgaaccaatttcagcacttggtgatcggacagtatcagctgatgtgcctgacactgaacataatatagccaagtgccagagggatcgtgaagaacaaactcaagaactgagcggtcatcatgatagttcagaggctgatggagaagtcagaaagtcggaggatggcattgtgagcaataatgatggcacaagggataaaggtagaatcagtggtgacagcgagaaaaacccagatgatgttcgtcttaagaagtcacgcacatacctattgcttcttgcaattcttgcagtgtccttgacatatcaggcgggtataaatccaccaggtggcttttggacatcaaatacccctagtcactcagctggtgatcccatccttgaggataattaccataagagataccttgcattcttttatttcaacgcgattgcctttctagcttctcttgtcatgctcattatgctcctgaacaggaagatgagcaacaaggttataaaacgccgtgcactacaaacggcgatgataactgacttacttgctctattgggggcttttgttgttgggagctgcagggagaaaacaaagtccatttacatatcagtggtgatattttttgtagtagttgcatatacttttcttcatgttttggcttcaaagtatgcagttcctgaacagtggaaacaattgtttaagcggcgacaggatgtactacaagaacatcatgtagataatgatgcaaaggatgctcatgagaaggacttggagcggaggcgtaatttgctattcattcttgctattctaacagcaactgtcacatatcaagctggcctgaaccctccaggtggcatttggcctgatgggagtggcaaacctggcaatccagttcttcaagatagccatccaaagcgttatgatgttttctactattcaaatgctctctcatttgtgtcatctgtggctgttatcatactacttgtcaatagggaatcgtgcgagcatggaatcaagtcctacgcactgcgtgtctgcttgatagcgggtttgcttggtctcctgattgcttattctgcaggaagcttcaggaaagtaaaatcaataggttatctcattatcataactgctgcagttctcatctgtcttttaattcaagttcttgtactgtcatcaacaaatgatgcactagaaccgccagccaggtcagggagatggttacagaagatttttgggcttgctgattctcaaaagtcactagcaagtccaggtcagtcaaaaaatgaaagtgacaagtcagatccccttatcaatgaaaagaaagaaaagaggcataagtacttgatgctgcttgcaattcttgctgcatccattgcttaccaagctggtctgaacccacccgggggtttctggtcagaggacagtcgtgatggctacaaggctggcaacccgctccttaaggacatacactccagacgctatatggtgttctatgtttctaattccatctctttcatggcatctattgctgtaatcatgcttctgctgagtaaatctgtgagaaagaataaggttccactccaagcattgttcttgatcatgatactagacctgttggctctgatgacagcttatgcagctggaagctgcagaaaggtcagaacatcaatatttgtcttcttggtagtatgcggggtggtgctataccttatgattataaggaaagtgaaggaaaacgattgtagctgtgttgactttctgcacttctccagaaccttatcaagttctgcaatcccaaacacaagaggatctctgagggtagcaaaaagaaaaggaacatgggatggtatagatgcacataactcgcatcaggacatagcaaaatactgtaaatggtcctgttctcaaagaatgctgccctag
More
|
|||||||
| Protein seq | MASPASSVSPQNRTEDTKELGRRRNLLLTLSVLAATVTYQAGMNPPGGVWSDDKDVSGKPGNPILQDTHPKRYDVFYYSNSLSFVSSVVTTILLVNKESCEHGIKSHALRVCLVVGLVGLLIAYAAGSCRKAIQSIYLIIIAVAVLISVVIQVFLLSSTNSNTLQTFLSIRDVNQDSSSGPQESTDPQEKKERKRKKYLMLLAVLAASIAYQAGLNPPGGFWPDDGGHKAGNPILHDALQTFFCFNAFSFMSSIVVIMLLLSRTIREKDVHIDVLYLIMILDLLGLMTAFAAGSCRRFRTSVYVYGLGVSDMQPHRGSESIAEADGGHPQSEIVESNSLPTPESRDDGQMADEAADIESQQDSKMVEIKDQDSGNSSSRSASLNSHEVRIKTDFVFLWRLRKYLLLLAVLAVSVTYNAGLSPPGGFWTDDSPVHHAGDPLLPSKFFQRYEAFFYCNATAFAASLVLIILLLSRGVANQHLWLRAMQVTMILDLFSLMGAYAAGSCRALKSSVYILVLVLSVFFYVGIHILVFIRVVPKWLKEGVQTFMHQTVQKLQRMLKQVLTICHLPKKQRSNQNDKEEIEEARKFILMLSTFAATITYQAGMSPPGGFWAENSHGYRPATFVLRRHNLRRFNIFTCSNATSFVASLVTIILLLSTELSRHGIRTQALFVCVIAELFGLIFAYAAGSCRDVATSLSVIFIIVVVLICALILVMFFQSRTVTIWIDNALRPRFDHFLEMLSWPRENRLSDGNREGPLSSSRQDTDHGNLGDQSTEDVKSAPTNDLESIKDSIPNMANQLHDQKDNLAIATVHSSSADVPSRKGPLPEQVLSEPISALGDRTVSADVPDTEHNIAKCQRDREEQTQELSGHHDSSEADGEVRKSEDGIVSNNDGTRDKGRISGDSEKNPDDVRLKKSRTYLLLLAILAVSLTYQAGINPPGGFWTSNTPSHSAGDPILEDNYHKRYLAFFYFNAIAFLASLVMLIMLLNRKMSNKVIKRRALQTAMITDLLALLGAFVVGSCREKTKSIYISVVIFFVVVAYTFLHVLASKYAVPEQWKQLFKRRQDVLQEHHVDNDAKDAHEKDLERRRNLLFILAILTATVTYQAGLNPPGGIWPDGSGKPGNPVLQDSHPKRYDVFYYSNALSFVSSVAVIILLVNRESCEHGIKSYALRVCLIAGLLGLLIAYSAGSFRKVKSIGYLIIITAAVLICLLIQVLVLSSTNDALEPPARSGRWLQKIFGLADSQKSLASPGQSKNESDKSDPLINEKKEKRHKYLMLLAILAASIAYQAGLNPPGGFWSEDSRDGYKAGNPLLKDIHSRRYMVFYVSNSISFMASIAVIMLLLSKSVRKNKVPLQALFLIMILDLLALMTAYAAGSCRKVRTSIFVFLVVCGVVLYLMIIRKVKENDCSCVDFLHFSRTLSSSAIPNTRGSLRVAKRKGTWDGIDAHNSHQDIAKYCKWSCSQRMLP
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.000000 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0291800 | RBH | 0.431349 | 0.207021 | 1.364383 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g18850 | RBH | 0.282307 | 0.143971 | 0.350200 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0291800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0011980 | RBH | 0.099202 | 9.193306 | 0.667333 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0011870 | RBH | 0.156056 | 1.828920 | 1.609057 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0011890 | RBH | 0.0 | 3.775785 | 0.364952 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0011940 | RBH | 0.040646 | 0.098215 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0012060 | SBH | 0.357709 | 4.364165 | 0.736003 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0175300 | RBH | 0.992536 | 9.33329 | 0.760162 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0011520 | SBH | 0.0 | 0.093087 | 0.063138 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0171500 | RBH | 1.7141255 | 5.63235 | 4.424208 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0012090 | RBH | 0.014147 | 0.080845 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0011930 | SBH | 0.089425 | 2.502200 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0011770 | SBH | 0.0 | 6.985230 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0031570 | RBH | 0.000000 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0011810 | SBH | 0.020095 | 2.943754 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G011690 | RBH | 0.192742 | 0.253469 | 0.339087 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0012030 | RBH | 0.0 | 0.000000 | 0.447373 |
