Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_04g0005330 | OGI:04024960 | 4/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr04:7504990-7516459 | ||||||||
| Gene Symbol | rNBS17, - | ||||||||||
| DNA seq | ctagatgcggtagagctcctgtacatgcgccattttctcgtgcattccattgctctcccagtaagtgttgaagtccttatgtagatgcagcagccatagcttcttcaaggagcgaagaaactcgatgccttcaggtacctttttcacattgtacaaagacacaatgtgcaaaccttcaatccgtggaagggcacggtcttcgatctccaccttgttgacatccggcatgtgtttcaaaacgagtgtctttagctctggaaaacaccctgcagaaagaactaatgtctttgtagtatacaccctgtttattcttagaaaggtgaggtatggcacatgtgatgctaacagtgacaggggatcttccccaagatgacaccagcttagagctaagtacttgagatttctcccacagtcctgaaatattgggcattgcagtgtcccattggcccagtgccctctgacaattagcttgtggagcctccctgaaataggctcgagggttttgaagcaaagcgtctcagttttactacttgcggaaagaagcagggttgaaagaagtggcatatttgatagtgtagaaaaaagaactgcacaatcaacatcagttatgttgtcaatccacacgcttcacagttgcgtaagtttgttcagctgctcggccaaatctttgctggcttccacagtttcgagtgtctgcaactcttctaagttggatagctctttcggaggttgaactccagtgaagtaccggaaatctgaatgcttctcatcagcacatctgtcagctaaaaggtgttgtagcttcctgaccttgacaatccctcgtggtagcttctctatttttgtctgcttgatgtctagagtgtggagattatagagtttctcaattgtctctggaaatgacttgactttggtgcgccttaagccgatatatcttaggttaaacagattccctatacttgttggcacttcagtgatttcagaatcttgcagctcaaggacagtgaggtaggtggattcagagaaaattgaggacaacatgttagaggaggatgaaattgtttgaactgatattaatgttcgaaggcgaggaaatttagctttatagacacctttgtcctcccaacgacacattgacaagcggcggacttcattatccatcagcatcattgtgccagaatcatttgctgaaccaaatctctcatctttagccacaaaaagagccagatcacgcataatgtcatgcatcttacaggtactaaccctaccaagttcatctgtctctaccacttccagcatatttcggttgatcagttcattgagatttccttcagccacgtcttctggcgtgttgttttcttttcttgcagcaaatccttcagcaacccaaagtcgtacaaggttgtctcgtggcatggggcaatcctcagggaacatgctgcaatacaaaaagcagttactgaggtctcctagtaagtcatagtagcttaggttcagaattgcttgtacatgatcactctttgctagctcgctctgtagctgattgtatgtttgcttccaagcatgctgtatcggctgctttgaggacaacaggctcccaatagatacgatagctagaggtaggccttgacacctatcgacgattgaattagccaactctagaagttctgaggggcaatcgtagtccttcctgctataaaaagcccttctgcagaagagactgaatgcatcgaccttgtccaaaggttggagtttaaggtgacgtgttggtagagctagtgctgccacatgcttactccgtgtagtgatgatgatgcggcttgcctggagattttggaaggcatcatgtatttggttgtatgcttctctatcccagacatcatccaacactatcaaacaccttctatcacttatgttttctttgaacttctcttttaagtcatgaacatccataccatccaagtgtgcttgatctgcatatccaatcttcctgagtaccttcctcagcaattcttctacgtcataggtctgtgacacgacaatccaagcatgagcatggaacctgatcttcccacgctcatacacattggcaacaatggtagtttttcctaatccacccatgccagatactgttatcactgtgctatctagttcatttgagtacaaccatccagtcaataacatcctgttgccttcgatccccacaagatcttcatcctttacgagctctggcaagcagccttgtgaccgctttatttcaaagtcagaatgtttattacggataagctgggatggttgcagccatttatctttcagctttataactctttggatttcctgctcaatctggactatctcagcaacaattccatcgaaaacaatggcataatgtgatcctttgacaacgtactttttcaggaacccttcttcctccatttgaagagcatgatatgagtatttgtccattacatcctcaacatggtaggccagctttcgtacctccgcaatccaacccttgataactttgtcagtgagatgtgctgtatctagttgttctatgacattttccattgttgttagttccattcttatttcttcaaccttccccggtaactccgccaaactctttcctttctgatatagcttggatactgcagatttggcaatatttgtgggatccaatccaaaagtactattaatctttgatagagcaagaataattgcttctgccatttgtgctgaggaaaaaaaaagttcatgttacacagtgcaggaacaagattcaggactcagtaaaactccatccagccttcttgcgttacctaattattaatttcaataagtagaaaatcaaaccatcatatagcaaatcaatatatatatatatatatatatctgtttcttgtctgaaacacaacaaattaccaaattgattttttttaattcgcattagatcggatattttccttttatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatttttggatttcgatcgtatctaagatcctagtttatctgggttgctaactcaatggtagagtactcggcttttaagtgcgactatgatcttttacacatttggatgaagcaaaaaattcgtccagactcttggtagagtctataagaccgcgactgatcctcaagggtaatgaatggaaaaaatagcatgtcgtaataaaatcaatttcttattttggatttttggaatggaataaaaaaattctgattttctgggtctaatgaataaatggatagagcctggctccaattctggtaaaacaaaaagcaacgagcttaacttcttaattggaagaactccctgatctaattagacgttaaaaatagattagtgcctgatgtagggaaaagctggttttcctatgagtagacctttgattttttcttttttttttagaaatcctaattattcttgattttggattgaaaaggatgttatggattgaatgtgtaaaagaagcagtatattgataaagagactgtatcccaaagtcaaaagagcaattggcctgcaaaaataaaggatttgttctcttttgtaattagaacaaacataaacaaattggatagaaaaggagcggaaaaagatccgtggattagactccttttcttccccaggggtttgtattaaaaaatgcaacaccctgttctgaccatattgtactatgtatcaccatttgataaaccgagaaatatttctctctctctgattcaagtagaaatacaaatggaaaaattcgagggttattcagaaaaacttaaatttcctagacaatatttcgtctacccactactctttcaggagtacatttatgtgtttgcccatgattatggattaaatggttccgaacttgtcgaaattattggttctaataacaagaaatttagttcactacttgtgaaacggttaatgattcgaatgtatcagcagaatttttggattaatttggttaatcatcctaaccaagatcgattattggattacaacaattttttttattctgagttttattctcagattctatctgaggggtttgcgatcgttgtagaaatcccattctcgctacgagaacagtcttgtccggaagaaaaagaaataccaaagtttcagaatttacgatctattcattcaatatttccttttttagaagacaaatttttgcacttacattatctagcacatatagaaataccctatcctatccatttggatatcttgcttcaactccttcaataccggatccaagatgttccatccttgcatttattgcgattctttctcatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatataaaaggaaaatatccgatctaatgcgaattaaaaaaaatcaatttggtaatttgttgtgtttcagacaagaaacagaccaaatttgcagtttcggcgaatgaaagctaattaacaagccagataatatctttaatacaacatttagattacaaatatgaaataataattttggatttgaaatccaatagaacccaactgcaatgaaggtgtcagctttatgtttacaaaacaacaattttcccaccaatcaaagtaacataggagatcaatctttctccagtaccttttcttttgttataaagctttaaatctgtttggaaatttattattttcctgcatgttcgataaatcaattggacattggacttttgatactcctaaggacgttattagagatactgatagtatgcttccaaagttattttatttgccagatgacgtgcaggctatctattttgcatttctagcaggctgtggaaacaatggaataaatgatgcaaattagaaatgggttttcattttcttggatgtctcaacaactagagttgcattttttataaggaattgtataaagaagttgtacttgctatgggcctatgggttttacgtctaagatcagctactgtagcactactagttatactcatccgccatactaagcaccagggaattagcctaagaaattaggtcagattggttaatgttatagtatcgtttgtttccatgatgttagggcatatattgttatactatactatttattagttgggcgtgctaagtagagcccatggtgctacgtccttacatggggccccatcctcacacaaccatatattgtcttgtcatgccccagcaaacaataaggctgtaaatgactaaatacccatctatgtaaataagaatagttgaatgcatcacacaagtgtaaatcctcattgcttttcgaagggcaattattggtcctgaattggtagcttggcaagatctactgcccaaagtagctacgataaatcttcaacaacatggacggtttaaactattcaacgcgttgagctttgatgtactgcaaaaattccatattacatcgaacaactttgtgatactttatgaaacttgcaaagtagagttgttttttatggtacttgtgaaaaggtgttactccaaccaaggatagttgagtgaaaaggagatgacgaggtagtaaaatatgttgttttcatggtgctgatgaggctacacaacactctttcattgactgtaacagtttgctactagttttatttggcagactattcatatagtttatggtttacagccacccaaaaacattgatcatattttaggaactggattttgggtttggataaaaaaacaagatctaaggtttcagcatgtgctaatgatatgttgggtaatctggttaagttgtaatcgcaacgattcaatcttgtatgcaggatatctatagtggacatattggctttgttattggtcattgctaaaaaatgaggatgagaaagcagaaatcaacatgggcttgtggggacatatatttgctaattaacactctaccggaagattaaaacaaaactttgaataagaaaaaaatttcgctgcatccaagagcaataccccgaatgaagctggtgccagaggaaggaaaaggaggaatgagttaggtatctgcagccattggcgctaggtgcggcggacgctcatccggctaaccccgaactccaataccccgccactgcaccgagagtgtgcataagaaacatcgccgcgagccaggagggctcggcacttgctacggctgggccgagaggaaggggggcacagctgattcaccgtgggggacggcagcagcaccaacgcgtgatggggtgtccaggtgagcgccgccggtaggcgctattttagctcgaggagaggagacgacgacgcggaacatggtttttgactaatttccaccaaataactgatatttttttatgagtggatgactacggggaccccaagaactgaactagtggaagtttctgaaattgcagggtgaaatttgaaatcaattatgaggtgcatctcaatactgctgcaaagtttagaatcctaaagctttggattttttttttaattttcactgaaaaaggagagcaggaaacgtcaaatgctagaaatgtcctggccacactagttatattatcctcttcctcatgcttgctttccatttgcttgtgagcaatgatttgatattccgtggagtcttgtcgcgtgcccgtggtgccaacgttacagcgatgaaggccggtggctgacgaggagggtggaaaaggatgcagttgcatggcacagtcaccgtggggaagctgggttggtagcggtggctaggtagggtaacgaggaggcatcagtgaagatgtgggtgctgtggctgcttaactgttactcaggtgtaccgagacgatgtccatggaccaactaccataggtgcaggacctgcttctggagattgcctaggtgtcccggtttaggtcatcatctgagaatgtcacagcctacttggggatgaattgtgcgcacgtgggctaaactcatgctaggggcctactcgccgattgcgctccaactgcttgccgtcatgcacagccactgcacctccggagcacattccacgcatacaacgcactctcgcctcttgtcaagttatagtatgcttcacgcccaaccatgctatttcttccaagcgctcgacagtgaggaccacgtccacatgattgatctcaaaatcatacaagggctgctgtgcttggggctctttcatattctttcttctcagctggccagccgtgctcgcttcacatgacagggcttcgctcgtcgctccatgtccttgaagccaatgtggtcaccacctcactacttcactgtctctctcggtctaccctttgatttttggcccatcaagggctagatcgggcatgacgctgatgctgctgtgctcctcggcctgcaccaccatggagagaaagggaaagtagagcggaactgaaataatctgatccaattgggccagtgccatttctaacatttcaaattatttccataaacctaaataaatattttattagatgtggtgtctagcagcaaattgacaaattttgatagtgttttcctccaaaaattaacttttgtcgtgcccacgaactaagatcctcaggacaataaattttgccatttttctgatgtcttcatttgggttcatttggttagatttattgggctatttattaattagatcaggatcaacgatagttgacgtattcaccgtacattcaatttgatactaaccaaagatctagatcaaggagatgatatctgtaatttgtatttgcaactaattgttgttccaagctatttgcattttgttatgaccatattttcctctctttatctataaatataaccaaataattcagtactttgtcatcataaatttaagacttagttgttcgacaatatttgcagagctcctggtctcataataaatgcagctcagagcgctaatttgatttattagtcttgattatacttatattacttttcaataagttcaattcctcgctcaccaggatgcatgtgacttttaatgttatatttgttgagacttgagaaccctcctttatatctatcccttctctcttcttatctaacctagtagttatctctggcacctttgtaatatacctcattctatttagtctgttttgctccatgtgtgtttctgtttcaatttaaatccactagacactagtgtttgtttaatgggaatagtcccacatgaagagtttagattagtctggagctgcttgtatacccacctcactccaaccataatacatgcgggttaacccttttatatgaactgaggatgaaagtgtaagtggagtgctatatgaacatggacccacataacgtgtagagaagactaatgttgttattatttggggctaggatgtaccatggtgcttgggaagtacatataattttctcaagttatttgcatacatgtttaatcagggagactggaataagtgagatgtatatactccctccaatcccaaatgatacttcctccgtccttaaaaaaaactctacttctagagtttgaattttgtcctataaaaaccaacttctaccatcctacctaccctcacaaataaaacaagaacttttatcccctttacctacctatcattacttttttaaataatgagggacattttggtcatttttctctccattaattttaccttggcatgttaggaatgctctttttgtgggatagagggagtacttgttacctggcatcatttataactaaatcacttctgtttcttttgaaaaaaaataagctgttgcattctataaataaacattaagattccgttaatcataatctaaccataccatttaaaatatattaatattcaaagattaaataaacaatgacaaatatttggaataacaagtatgaaacagagggagtatattttaggatgaattccgatttacctctaaactattgcgtttgtccaatttacacccctaaactacaataccagatacttttaatcgtgatctatccaaaccggacgaattacccccctaagtccattcgagggggttttagtcataagtgcacacatggcatcggccccgcttgtcagcctccacttcattcgccctcccctatcaggctagtgggaccctcctatcagcgtcgactcatctcatcttcttcctttggccatgagggcaataaaagggcagggcaggtagtcgggctagagcttgagccctcccatcccctccgctctgcaatcctccttgtgaccttttcaccgctggatgccgctctccttcctccgtacttacttccctcatttctccgtcaggtctgatcacggtgagccaggcaagcctagatctatctggtcaagctaatatggtcccatggagtggtgtgcccctagtgatgccggtgcccggtggtgcgaagaggagggacaatggggctgatggagaggagggggaaagggccctcgtgcaaaaactggaggcttgctgccggtggagttcctacttcctagaagggtttcgtggtagacctgcagcgaagctgatggcgagacaattctctggaacatgcagctagtggtagatcaaagattgagacgaccagcccgagaggagatggcaacaggcatggtgatggctgtggtggtgggagaccaggacagattaaagtacgcgagcaattgtacccacctagcgtgggtgaggttttcggtatggccgacggcagcgcctgcatctgtgcctcctgcttgcaggagaagctcgggatgctcgactcttcgtcccagtcaaacccttcccacccactgtctgtgtgtcgtccaccttctcttcctattctttgaccagcaacctcaccgctgagaatggttgttggtgagctcactgagagaaaagcaggttgaatggtgaggaatagggatgaagatatatttttatctcagaatggttgttggtgagccgacgccgctcttccccctcgtaggcttgccgttcgcgccgtgcgtcctcgtctgccatctaggagggcaagtgtagagtcccggagcaaatacacaagcacgccgtcctcgtcggcagcggcagcagcacgaacaagcagggccctgctgcaggagcttgcgactccactgctggcgccaggagatccaaatcaagagcaaaagttcaagcttgttgtcctcgtcgccgtcggcagttcgtcagttcggcaagttgatctgcttaattttggttggcctgggtgcaatattccaaattgatgtgtacaaaaattttgtggcaagactttgtgatttgtcggttgtttgatctattatgcaattacaaaaaatattgctcgcagccacaatcttcgatattttctttgaagcaaaagatttttgttgagtcactggtgtctattgactcgcaagctaaacgagctagctcgagctaccaaccgagccgagccgagctaggattttagcacgttaggataacgagctgagccgatcctaacgagctagaccgagctaagccgacccgagccgagccagctcagtatccacctctaattatgtaggaccattaatgtctcgaaatatattagagggtaatttgtctgctttaaaaagtttgagacttgaaacgtccggtattgaaaatgagggggtaaaacaaactatgtcagaggttgaggggggtaattaagactttttcctatattttattgacaaatactggctagatatatcacacctaattcttttttattctgttttattatttagagcaaagatatttcaatctagctttataaaaatgctacatacggtacatacattcatatctataatgtgaaagtgttgcatgacaagtatacgctataacataacatagggtgttaaaagcaaaatatattaatgaccggggtgagtataggttataagcactacccagaaaaaaaaacatggaaaccgacaggagtcttttccgccttggaagaaattttaaatatgaatgaaaaattgcaggtctatgagtaaatttcaagaaagggaataatcaagggggaacaaaattgccacagaatgacagaaacttcagcaacaatgaaatcaatacagttttgtaaaatttctttcagctagcgtagatatgatgctgtaaaacagtagtaaaattggtaccttgagttgtagatcaagatagctaactcaaactagctcatgcatggaagaacagccggttgatgttggtagcaaggaaaatatggacccgaacttcagatc
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| CDS seq | atggcagaagcaattattcttgctctatcaaagattaatagtacttttggattggatcccacaaatattgccaaatctgcagtatccaagctatatcagaaaggaaagagtttggcggagttaccggggaaggttgaagaaataagaatggaactaacaacaatggaaaatgtcatagaacaactagatacagcacatctcactgacaaagttatcaagggttggattgcggaggtacgaaagctggcctaccatgttgaggatgtaatggacaaatactcatatcatgctcttcaaatggaggaagaagggttcctgaaaaagtacgttgtcaaaggatcacattatgccattgttttcgatggaattgttgctgagatagtccagattgagcaggaaatccaaagagttataaagctgaaagataaatggctgcaaccatcccagcttatccgtaataaacattctgactttgaaataaagcggtcacaaggctgcttgccagagctcgtaaaggatgaagatcttgtggggatcgaaggcaacaggatgttattgactggatggttgtactcaaatgaactagatagcacagtgataacagtatctggcatgggtggattaggaaaaactaccattgttgccaatgtgtatgagcgtgggaagatcaggttccatgctcatgcttggattgtcgtgtcacagacctatgacgtagaagaattgctgaggaaggtactcaggaagattggatatgcagatcaagcacacttggatggtatggatgttcatgacttaaaagagaagttcaaagaaaacataagtgatagaaggtgtttgatagtgttggatgatgtctgggatagagaagcatacaaccaaatacatgatgccttccaaaatctccaggcaagccgcatcatcatcactacacggagtaagcatgtggcagcactagctctaccaacacgtcaccttaaactccaacctttggacaaggtcgatgcattcagtctcttctgcagaagggctttttatagcaggaaggactacgattgcccctcagaacttctagagttggctaattcaatcgtcgataggtgtcaaggcctacctctagctatcgtatctattgggagcctgttgtcctcaaagcagccgatacagcatgcttggaagcaaacatacaatcagctacagagcgagctagcaaagagtgatcatgtacaagcaattctgaacctaagctactatgacttactaggagacctcagtaactgctttttgtattgcagcatgttccctgaggattgccccatgccacgagacaaccttgtacgactttgggttgctgaaggatttgctgcaagaaaagaaaacaacacgccagaagacgtggctgaaggaaatctcaatgaactgatcaaccgaaatatgctggaagtggtagagacagatgaacttggtagggttagtacctgtaagatgcatgacattatgcgtgatctggctctttttgtggctaaagatgagagatttggttcagcaaatgattctggcacaatgatgctgatggataatgaagtccgccgcttgtcaatgtgtcgttgggaggacaaaggtgtctataaagctaaatttcctcgccttcgaacattaatatcagttcaaacaatttcatcctcctctaacatgttgtcctcaattttctctgaatccacctacctcactgtccttgagctgcaagattctgaaatcactgaagtgccaacaagtatagggaatctgtttaacctaagatatatcggcttaaggcgcaccaaagtcaagtcatttccagagacaattgagaaactctataatctccacactctagacatcaagcagacaaaaatagagaagctaccacgagggattgtcaaggtcaggaagctacaacaccttttagctgacagatgtgctgatgagaagcattcagatttccgtaaaactgagacgctttgcttcaaaaccctcgagcctatttcagggaggctccacaagctaattgtcagagggcactgggccaatgggacactgcaatgcccaatatttcaggactgtgggagaaatctcaagtacttagctctaagctggtgtcatcttggggaagatcccctgtcactgttagcatcacatgtgccatacctcacctttctaagaataaacagggtgtatactacaaagacattagttctttctgcagggtgttttccagagctaaagacactcgttttgaaacacatgccggatgtcaacaaggtggagatcgaagaccgtgcccttccacggattgaaggtttgcacattgtgtctttgtacaatgtgaaaaaggtacctgaaggcatcgagtttcttcgctccttgaagaagctatggctgctgcatctacataaggacttcaacacttactgggagagcaatggaatgcacgagaaaatggcgcatgtacaggagctctaccgcatctag
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| Protein seq | MAEAIILALSKINSTFGLDPTNIAKSAVSKLYQKGKSLAELPGKVEEIRMELTTMENVIEQLDTAHLTDKVIKGWIAEVRKLAYHVEDVMDKYSYHALQMEEEGFLKKYVVKGSHYAIVFDGIVAEIVQIEQEIQRVIKLKDKWLQPSQLIRNKHSDFEIKRSQGCLPELVKDEDLVGIEGNRMLLTGWLYSNELDSTVITVSGMGGLGKTTIVANVYERGKIRFHAHAWIVVSQTYDVEELLRKVLRKIGYADQAHLDGMDVHDLKEKFKENISDRRCLIVLDDVWDREAYNQIHDAFQNLQASRIIITTRSKHVAALALPTRHLKLQPLDKVDAFSLFCRRAFYSRKDYDCPSELLELANSIVDRCQGLPLAIVSIGSLLSSKQPIQHAWKQTYNQLQSELAKSDHVQAILNLSYYDLLGDLSNCFLYCSMFPEDCPMPRDNLVRLWVAEGFAARKENNTPEDVAEGNLNELINRNMLEVVETDELGRVSTCKMHDIMRDLALFVAKDERFGSANDSGTMMLMDNEVRRLSMCRWEDKGVYKAKFPRLRTLISVQTISSSSNMLSSIFSESTYLTVLELQDSEITEVPTSIGNLFNLRYIGLRRTKVKSFPETIEKLYNLHTLDIKQTKIEKLPRGIVKVRKLQHLLADRCADEKHSDFRKTETLCFKTLEPISGRLHKLIVRGHWANGTLQCPIFQDCGRNLKYLALSWCHLGEDPLSLLASHVPYLTFLRINRVYTTKTLVLSAGCFPELKTLVLKHMPDVNKVEIEDRALPRIEGLHIVSLYNVKKVPEGIEFLRSLKKLWLLHLHKDFNTYWESNGMHEKMAHVQELYRI |
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| Function | Disease resistance protein RPM1 [UniProtKB/Swiss-Prot:Q39214] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_04g0005330 | OsKeNa_04g0005330.01 | Chr04 | 7504990 | 7516459 | - | NAM | ||
| CDS seq | atggcagaagcaattattcttgctctatcaaagattaatagtacttttggattggatcccacaaatattgccaaatctgcagtatccaagctatatcagaaaggaaagagtttggcggagttaccggggaaggttgaagaaataagaatggaactaacaacaatggaaaatgtcatagaacaactagatacagcacatctcactgacaaagttatcaagggttggattgcggaggtacgaaagctggcctaccatgttgaggatgtaatggacaaatactcatatcatgctcttcaaatggaggaagaagggttcctgaaaaagtacgttgtcaaaggatcacattatgccattgttttcgatggaattgttgctgagatagtccagattgagcaggaaatccaaagagttataaagctgaaagataaatggctgcaaccatcccagcttatccgtaataaacattctgactttgaaataaagcggtcacaaggctgcttgccagagctcgtaaaggatgaagatcttgtggggatcgaaggcaacaggatgttattgactggatggttgtactcaaatgaactagatagcacagtgataacagtatctggcatgggtggattaggaaaaactaccattgttgccaatgtgtatgagcgtgggaagatcaggttccatgctcatgcttggattgtcgtgtcacagacctatgacgtagaagaattgctgaggaaggtactcaggaagattggatatgcagatcaagcacacttggatggtatggatgttcatgacttaaaagagaagttcaaagaaaacataagtgatagaaggtgtttgatagtgttggatgatgtctgggatagagaagcatacaaccaaatacatgatgccttccaaaatctccaggcaagccgcatcatcatcactacacggagtaagcatgtggcagcactagctctaccaacacgtcaccttaaactccaacctttggacaaggtcgatgcattcagtctcttctgcagaagggctttttatagcaggaaggactacgattgcccctcagaacttctagagttggctaattcaatcgtcgataggtgtcaaggcctacctctagctatcgtatctattgggagcctgttgtcctcaaagcagccgatacagcatgcttggaagcaaacatacaatcagctacagagcgagctagcaaagagtgatcatgtacaagcaattctgaacctaagctactatgacttactaggagacctcagtaactgctttttgtattgcagcatgttccctgaggattgccccatgccacgagacaaccttgtacgactttgggttgctgaaggatttgctgcaagaaaagaaaacaacacgccagaagacgtggctgaaggaaatctcaatgaactgatcaaccgaaatatgctggaagtggtagagacagatgaacttggtagggttagtacctgtaagatgcatgacattatgcgtgatctggctctttttgtggctaaagatgagagatttggttcagcaaatgattctggcacaatgatgctgatggataatgaagtccgccgcttgtcaatgtgtcgttgggaggacaaaggtgtctataaagctaaatttcctcgccttcgaacattaatatcagttcaaacaatttcatcctcctctaacatgttgtcctcaattttctctgaatccacctacctcactgtccttgagctgcaagattctgaaatcactgaagtgccaacaagtatagggaatctgtttaacctaagatatatcggcttaaggcgcaccaaagtcaagtcatttccagagacaattgagaaactctataatctccacactctagacatcaagcagacaaaaatagagaagctaccacgagggattgtcaaggtcaggaagctacaacaccttttagctgacagatgtgctgatgagaagcattcagatttccgtaaaactgagacgctttgcttcaaaaccctcgagcctatttcagggaggctccacaagctaattgtcagagggcactgggccaatgggacactgcaatgcccaatatttcaggactgtgggagaaatctcaagtacttagctctaagctggtgtcatcttggggaagatcccctgtcactgttagcatcacatgtgccatacctcacctttctaagaataaacagggtgtatactacaaagacattagttctttctgcagggtgttttccagagctaaagacactcgttttgaaacacatgccggatgtcaacaaggtggagatcgaagaccgtgcccttccacggattgaaggtttgcacattgtgtctttgtacaatgtgaaaaaggtacctgaaggcatcgagtttcttcgctccttgaagaagctatggctgctgcatctacataaggacttcaacacttactgggagagcaatggaatgcacgagaaaatggcgcatgtacaggagctctaccgcatctag
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| Protein seq | MAEAIILALSKINSTFGLDPTNIAKSAVSKLYQKGKSLAELPGKVEEIRMELTTMENVIEQLDTAHLTDKVIKGWIAEVRKLAYHVEDVMDKYSYHALQMEEEGFLKKYVVKGSHYAIVFDGIVAEIVQIEQEIQRVIKLKDKWLQPSQLIRNKHSDFEIKRSQGCLPELVKDEDLVGIEGNRMLLTGWLYSNELDSTVITVSGMGGLGKTTIVANVYERGKIRFHAHAWIVVSQTYDVEELLRKVLRKIGYADQAHLDGMDVHDLKEKFKENISDRRCLIVLDDVWDREAYNQIHDAFQNLQASRIIITTRSKHVAALALPTRHLKLQPLDKVDAFSLFCRRAFYSRKDYDCPSELLELANSIVDRCQGLPLAIVSIGSLLSSKQPIQHAWKQTYNQLQSELAKSDHVQAILNLSYYDLLGDLSNCFLYCSMFPEDCPMPRDNLVRLWVAEGFAARKENNTPEDVAEGNLNELINRNMLEVVETDELGRVSTCKMHDIMRDLALFVAKDERFGSANDSGTMMLMDNEVRRLSMCRWEDKGVYKAKFPRLRTLISVQTISSSSNMLSSIFSESTYLTVLELQDSEITEVPTSIGNLFNLRYIGLRRTKVKSFPETIEKLYNLHTLDIKQTKIEKLPRGIVKVRKLQHLLADRCADEKHSDFRKTETLCFKTLEPISGRLHKLIVRGHWANGTLQCPIFQDCGRNLKYLALSWCHLGEDPLSLLASHVPYLTFLRINRVYTTKTLVLSAGCFPELKTLVLKHMPDVNKVEIEDRALPRIEGLHIVSLYNVKKVPEGIEFLRSLKKLWLLHLHKDFNTYWESNGMHEKMAHVQELYRI
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_04g0005330 | OsKeNa_04g0005330.02 | Chr04 | 7504990 | 7516447 | - | NAM | ||
| CDS seq | atggcagaagcaattattcttgctctatcaaagattaatagtacttttggattggatcccacaaatattgccaaatctgcagtatccaagctatatcagaaaggaaagagtttggcggagttaccggggaaggttgaagaaataagaatggaactaacaacaatggaaaatgtcatagaacaactagatacagcacatctcactgacaaagttatcaagggttggattgcggaggtacgaaagctggcctaccatgttgaggatgtaatggacaaatactcatatcatgctcttcaaatggaggaagaagggttcctgaaaaagtacgttgtcaaaggatcacattatgccattgttttcgatggaattgttgctgagatagtccagattgagcaggaaatccaaagagttataaagctgaaagataaatggctgcaaccatcccagcttatccgtaataaacattctgactttgaaataaagcggtcacaaggctgcttgccagagctcgtaaaggatgaagatcttgtggggatcgaaggcaacaggatgttattgactggatggttgtactcaaatgaactagatagcacagtgataacagtatctggcatgggtggattaggaaaaactaccattgttgccaatgtgtatgagcgtgggaagatcaggttccatgctcatgcttggattgtcgtgtcacagacctatgacgtagaagaattgctgaggaaggtactcaggaagattggatatgcagatcaagcacacttggatggtatggatgttcatgacttaaaagagaagttcaaagaaaacataagtgatagaaggtgtttgatagtgttggatgatgtctgggatagagaagcatacaaccaaatacatgatgccttccaaaatctccaggcaagccgcatcatcatcactacacggagtaagcatgtggcagcactagctctaccaacacgtcaccttaaactccaacctttggacaaggtcgatgcattcagtctcttctgcagaagggctttttatagcaggaaggactacgattgcccctcagaacttctagagttggctaattcaatcgtcgataggtgtcaaggcctacctctagctatcgtatctattgggagcctgttgtcctcaaagcagccgatacagcatgcttggaagcaaacatacaatcagctacagagcgagctagcaaagagtgatcatgtacaagcaattctgaacctaagctactatgacttactaggagacctcagtaactgctttttgtattgcagcatgttccctgaggattgccccatgccacgagacaaccttgtacgactttgggttgctgaaggatttgctgcaagaaaagaaaacaacacgccagaagacgtggctgaaggaaatctcaatgaactgatcaaccgaaatatgctggaagtggtagagacagatgaacttggtagggttagtacctgtaagatgcatgacattatgcgtgatctggctctttttgtggctaaagatgagagatttggttcagcaaatgattctggcacaatgatgctgatggataatgaagtccgccgcttgtcaatgtgtcgttgggaggacaaaggtgtctataaagctaaatttcctcgccttcgaacattaatatcagttcaaacaatttcatcctcctctaacatgttgtcctcaattttctctgaatccacctacctcactgtccttgagctgcaagattctgaaatcactgaagtgccaacaagtatagggaatctgtttaacctaagatatatcggcttaaggcgcaccaaagtcaagtcatttccagagacaattgagaaactctataatctccacactctagacatcaagcagacaaaaatagagaagctaccacgagggattgtcaaggtcaggaagctacaacaccttttagctgacagatgtgctgatgagaagcattcagatttccgtaaaactgagacgctttgcttcaaaaccctcgagcctatttcagggaggctccacaagctaattgtcagagggcactgggccaatgggacactgcaatgcccaatatttcaggactgtgggagaaatctcaagtacttagctctaagctggtgtcatcttggggaagatcccctgtcactgttagcatcacatgtgccatacctcacctttctaagaataaacagggtgtatactacaaagacattagttctttctgcagggtgttttccagagctaaagacactcgttttgaaacacatgccggatgtcaacaaggtggagatcgaagaccgtgcccttccacggattgaaggtttgcacattgtgtctttgtacaatgtgaaaaaggtacctgaaggcatcgagtttcttcgctccttgaagaagctatggctgctgcatctacataaggacttcaacacttactgggagagcaatggaatgcacgagaaaatggcgcatgtacaggagctctaccgcatctag
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| Protein seq | MAEAIILALSKINSTFGLDPTNIAKSAVSKLYQKGKSLAELPGKVEEIRMELTTMENVIEQLDTAHLTDKVIKGWIAEVRKLAYHVEDVMDKYSYHALQMEEEGFLKKYVVKGSHYAIVFDGIVAEIVQIEQEIQRVIKLKDKWLQPSQLIRNKHSDFEIKRSQGCLPELVKDEDLVGIEGNRMLLTGWLYSNELDSTVITVSGMGGLGKTTIVANVYERGKIRFHAHAWIVVSQTYDVEELLRKVLRKIGYADQAHLDGMDVHDLKEKFKENISDRRCLIVLDDVWDREAYNQIHDAFQNLQASRIIITTRSKHVAALALPTRHLKLQPLDKVDAFSLFCRRAFYSRKDYDCPSELLELANSIVDRCQGLPLAIVSIGSLLSSKQPIQHAWKQTYNQLQSELAKSDHVQAILNLSYYDLLGDLSNCFLYCSMFPEDCPMPRDNLVRLWVAEGFAARKENNTPEDVAEGNLNELINRNMLEVVETDELGRVSTCKMHDIMRDLALFVAKDERFGSANDSGTMMLMDNEVRRLSMCRWEDKGVYKAKFPRLRTLISVQTISSSSNMLSSIFSESTYLTVLELQDSEITEVPTSIGNLFNLRYIGLRRTKVKSFPETIEKLYNLHTLDIKQTKIEKLPRGIVKVRKLQHLLADRCADEKHSDFRKTETLCFKTLEPISGRLHKLIVRGHWANGTLQCPIFQDCGRNLKYLALSWCHLGEDPLSLLASHVPYLTFLRINRVYTTKTLVLSAGCFPELKTLVLKHMPDVNKVEIEDRALPRIEGLHIVSLYNVKKVPEGIEFLRSLKKLWLLHLHKDFNTYWESNGMHEKMAHVQELYRI
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr04 | 7507727 | 7516358 | - | OsKeNa_04g0005330.02 | OsKeNa_04g0005330.01,OsKeNa_04g0005330.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.138162 | 0.000000 | 0.117424 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0219550 | RBH | 1.797677 | 2.588988 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g14220 | RBH | 0.609254 | 0.515781 | 0.081356 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0219550 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0004690 | RBH | 0.061921 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0004880 | RBH | 1.586418 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
