Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_02g0034290 | OGI:02089910 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr02:32141099-32152385 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | agtaagagtattatagtagcagtcgattggaagctagactagaaagggtgacgcagctgtcatcccacaccggaaaccctctcttccagcgcatagcccctgtccatctctccctcctccgagtcttctcctctcctcttaacaaatccctcttcctctgcttcctcctctaccttcctaagcctgagaaggtgggagaggttatggaagaagagttagagtactactacttggaaagcgaggagttgggagcaaacacgatagaggctgatccctgtacgagacggcgaaatcggccccgccactattaatcgagtttgattgccatatataggtgtaggaacgggaccgggaaagagttcgatcgttataggatcattgatcgatcaatccatagtcttgcgaagggagaagcaagcggcggcgcgtacgtacgtcatggctgcggcctcgtcatcgacgtcgtccgctgggtcggcagcgccggctcacgcgccggcggcgggaggtgccggcggcggcggcagcagcggggtaccgaaccaccggacgcggttcggcgacaccacgctgaccaaggtgttcgtcggcggcctggcgtgggagacgccgtccaagggcctgcaggaccactttcagcaatacggcgaaatcctcgaggccgtcgtcatcaccgatcgcgagaccagccgctctaagggctacggattcgtacgtccctcctctttctcgccgacgagatgatcgctcgccgccgtgcatgcatgtattcatgtgcttgatcgatctgacacgagatgcatctgtgtcgacgcaggtgacgttcagggagccggagtccgcgcgggaggcggtgcggaacccgaacccgacgatcggcggccggcgagccaactgcaacattgcgtccatggggccgccgcgtccgtcgccgtcgcgaggtgagcaaattaacccgacgaacccccaaaaccaaatcaatgcctctctttccattacttgccagaacaaggcacgcgcatgtgcatggcagcaataactgggccatgattagcggtaaaccgattgcccgcacgcaatcaaaccggataagcttcgattagggcactccgccaatttttttttacccttgctttttttcccctcctcttcttcgtcgtcctccttgcgtgcgctgcggtggtgggtcgtgttggcatggcagatgggtggggcccaggtccagcttgctaaaagcctaaaacactgggcgccagcacacagtaaggaggacgacgactactacgagtactgcgtctgcattgggaggggaggcaggatcagacatcacattaccatgcctcatggctgcgtgtgcttgcttggccagctagcctggcctcacagcagttactacaggtttactacccctaattatctgcagcatttgctgcaccttcgtaccacacagtagtaggcgcgttgatctgtttggtagttgctgattaattagattaattagcgtaatcttggcagatttgtggttatgggatggttgattaattagtggggatgaactttctcttttatgatcttatattctttttttcttattgggagagaatttgctattgggagagaatttgggtggtttgactagagaatgcagtggcgatatgataaatcgttccagcgagaatgaggtgtaaaggggttgggagattgtagctggagaatcaggaatccccggcggccgccttcctttcttttctggtgaaaatcgatcggtgcgggggcattagaaaaatgcttcatagcatataccactctttcgcagtctttgaccggtatggttgggtaccaactgccaacgattggaggaagaataggtgctagctagcacagttcaatgttgtggctacttcgcatcaagtgtgttgggtccagtatccccttgtttctttagcttcactttcacttcattttgtgctcatccatatagggagatagtacatatcatttgcgtttcttacaatgcagcacgcacacatgcatgcccttatgactttaagccgtactgtgggtgagatgaaaacctgcatatgttttcctttcaaaaagaagagagagaacatgcatataccgctgatatcgtctagctattatattacgagaccttggtgcttttcataaaagaaaatacacacgaggggttacacagatgggttgtatacttgtattggtccttcaagttttttctccttttcatgctagaacaattgggacatcatactatttttatacaaaagaaaattgttgtttggtgcactacagcacaacagtgcctaaatggagttggttgtagtgctagctagctaaaaacagtcttgaattgtttggcggtgtgctaatctctaccaaaagaaacttctaaaaattcttctccattcgccatctaaaaatagaacaaaaatgctggtgtccttttgtgctgagaaactgattttttatgttactattagacagttaatattaacctttttagagggatcacaactcagtagttataatattatagtatcatttgctacttgcacccatgcatgttagtcaaacccagtcaatgtaaggagcacatggtaacacctctgtgcacagtccatacaactgttttgcaagccttgccctactggctactgtacgctatacatacatgcatacacctgctacccctgcacagttcatttattttccttgagtcattgtgtgtgttgttttctctgcagcctataacatgccattttgccatgcctaacatcatttcccctcgtttgtctctctgcagggcgggccccacgtgggtccctcttcccggatcagccacacatgggcccgcagccttacatgggcggccggttgccgccgcagcatatgacggccccacctcaacagatgtactaccatcctcagttcgggtgagtatcaaacttcttctttcctcttcttttttttaatcttttttcctctataaagccatcggatgcagcacgactcagaccccacgattacgatgatgcatggataatgaatacgtacaaccatcgtccaaaaaacacgcactagtatattgcaccgtcgtcatcgtgggatccgagccacgctgcaaattaacctgaaccttatcgatcagcggctgtgcatgcgacagcagctaagcattagctacacgtccatatcagcaccatgtcattccctctttgggagtttgcaccgtgtttccttgttagagcctagctgtaaattgcactgcaatgcacaaaaaggataaataggctgtttaggtagtgaggcctccgcgtcattggtgattggaactggtggttcatggagacgtatgcggtttttatccatgtgggtttttgaggtagacatttggagcccttattttgtcgaaagagatggtaccttattactaactgatctcggaggtaaacgggtggagtagtagacaagaaagtcgttgctgctaatgcacggtgattggagaggctgatctttttattgtactagctgatgggggtagctagtaccgaattggcgcctgctgctgcgtctcattttcacggcaatgactagtgtgtgaggtcccgttcctttcgtggcagcagctttccgtggttcgttttccttaattgggcagaagggttcagttgccaaggagcacagagggcccacgtgtccccattcccactcctgttgggccctgcgtgatggcccattaagcctgggccgatgggagggagacagcagctcagcaatggccaatgggcattcaactccggagggtcccacaccgtctctctctctagagtctagaccaccatggggtgttgccttcccagcaaacacactctgcactttgttggttttctgccgagttaaatgtctgcattcagatctgatgccacttggctgctgctatgcaatttgcctctttagtttgttttagttataaccgtggacctgtacagatcgttgaaacaggaatgcatgtgtggcatggcatgtacgggattttaaatttggttatattttgctaagaaccaccgctgaactagtagttgagttgtttctgcctttctcatatgcaaatgtaaaattagacgatctgaaagttactcttgatcttgatttttcttgaaaaaaggttaataatgttttatgtggatatttttgcacaaagtttattttaaaaaacagagtccagttttgtttttgacaaatgacaataactgcacttttatttgatgggggttatgatttagccagccaattgcttttaggttcatacaatttgtacaagaaatgaggaatttagaacccttttcctatgaactgctgctgccactgaaaaactggaagtacaagaaatgggaaaagtttattgctctagttttagctagaatagattgtgtatatatgagataagtttgggctttacagccaagatagttggtagatatgtctgctgtctccaagagaatggtgggactcatgttcggctcaatccctctcaatcttttacaacgcactaaagaaattatgcaaacttttgcaggtactggtacccacaagattatccttaccaacaggcaagcatcccatccatctccttgttcaatgtttgacgttttacttccatcacatgcgattggttcttgctacatgcatctccaataatttggtaacagtacacaaagaatagataagtttcacagttggcgttcatgttctgaaactctgaactcacaacagctaaagttgtgtcctgcacctcaaaagcttgaatactctaacatttagtagtattgattatctgcacatattttctatacaccagagcactaagttatagtaatagacatcagcacaagtactatcatcttatttttcccatctaacaatatatactggaagtatctagagtctgaatcatcttattttccatgtgtcaatatgtgctgaaactatccaatgtctgaactcctcagcatgccgtgtacaattcacaagcgctacagcattactaccctcagctgtatggtccaacatccccttcaacaccgtcgtaccagtttatggggtacatgccgggtgccctgggtccaagggctggcttctctccgatgcagcaacaagctccacggccacctttcattcagcagcctgcgctgcagttcgacgggggctctttccctccaggaccttctctcccaccggatttcagactccagttgccccctcatgcactctcaaggcaaccagatgaaacaaccggtatgtcattgttagcctaccattcagatatctattactgtcatttagaaacatagtacgttcttgtcacagttgacatcatttagaaacaacaccatcgtgacaaatttatgcctgactactgctgaatatgttgcaggtgctcaatcagctccgccagtctccgcgagtgcagctgcaactccaaccacagacagcaaggaagcatcaaagactgtagaatcaaattcagatctaaacacctcgaactgacttggtgaactgaaaattcttccgaaatgactcaatgtcagcccacatggtgccatggtggtctgtaacagggctccaagcactcatttcttgactgaaaaaaagcaccaaaagaattgttctttcattatttcatattcttttccaattttcacaatgcatttcttcggtgaatccattgtatggcccaactgaacttcacgaaaaaaaatctgtaattttccataatatcttccggcgcgtgctgttgttatctcttacatgcaccatccgtctggattactagtttacaaccaggtctttaccaatttaccattgttacagaatagatgatcatgatggagcatcttactacgacaggtgaaactgaaaccatccacaaacctgaaatactgactagtgacattggtgaagcagaggctgtctaacctgaaattattgttgatctttgttctccactccagaactaatatttgatatttctaacaagatagtgggagatggtcacatcatagattcatttacccaattacaaatcgcatttttaggattgatcaacaacaacaatattcagcttgcgtgatcacctcttgcaagcagaaattcaaccaaacgatctattccggcgctcgaagtgcctccttcctccgttgccgccacggctttctccttccacgccattgctttcgctctcatatccttgcttttctctccatccatggcctcttgcacgagccgtgccacctcctccctcttcacgtcggtgtcaatttccagtccaatgtcccacttggtgcaagcgtagcggcagttggtcatctgctcggcgaagaacggccagcagatcatcggcacgccggcgcttatgctctccagcgtcgagttccagccggaatgcgtcaagaacaggccggtcgccggatgctccaggacttgctcttgcgggcaccagctcagaaagatccctctctctttggtctcgctgacgaactcttccggcagcatggccttctcgctggcgacgaggtcgggcctgatgacccacaggaatggccggccgcagcgcgccaacccccacgcgaactcggcgagatgagccggcgacatgacggtgatgctaccgaagttgacgtacacgaccgagccgggctgctgggcgtccagccaccgaaggcagctcgcgtcctccttccagaggttgccgccgatcgcgcccacctcggggcgccgcgccgctgcggcccccgcgaacgtcaggagcgggccgactgtgtacacgcgcgggaagatgcggcgcagcgcgtcgacgacgtcgtgctccaccgcgtcgaacgtgttgaggatgaggccctgcgcgtggcgcgcgttctgcgcctcgccgctgtcgaagttgagcatgaactcgtcccggtcggtcgtgcggatgaagctgggcatgtcgcgcagccggatgcctggcatccccggcacccagtcgagcacggtgtcgaggtatccgttggtcaggtagctctcatctgcaacatgtccatgcatgagcaaaaacattttaccgtgcgtacagccatacacaataaaacggtaatcgtgagttcaagtgtactacctttgagtggcacgtagcctctgtcgatgagctcggcgtagtggagatatcccatgaagccgcaggcgctggtggtccagaacgccggggcaaggatgcccatgtcgctggccactctctgtgcgaagctcatcacgccgtccggtataacgcagctcaccggcggcgtcccgggctcgctgttgagccgcgccaggagggccccgaacgccgcggggccgtgcgtgaggaaggacgtgcagaccgtggggatgtcctgcgtgacgtcgtcgttgtcggattcggacggcggcggcaggccgtccgggatggtctcgaaccggaagtcgtcgaggccggccagcgcgccggtgccgcgggaacggaggaggcggtggtggttgtactcggagttgacgaaggtgacgtggaaccccctggagtggagcaccttggcgaggtgcaggaggggcgtgacgtggccctgcgccgggtacgggatgagcacggcgtgcaggcgcgagtttgagcccatggcaagcgatacgattgataccaaagtagagtacgtagtaacaattataggagtaactagcagtcggtactccgggattaaatgttagaggcggcagttaatgtgcaatagttgatccccttcacgatcatctattactcccgattctgagcttaaaattttcctaaaataaaaggagaaaattatattggtggtatacaaatgatgtgcgttagttgggtgtaatttgtagatgaacttctgaaatgctatttatgcacgaacttatctagttcatgcaaaacaagactaaaatagctttgtaaagttaattttaccaaagcgtgacattcattcatgtagttagtatgtataagatatccactcttctgtttcatattataagtcgctttgatttttttctagtcaaattttgttaagtttggctaaatttatagaaaaaactagcaacattttaaacacgaaattacattcattaaatctagcattaaatatattttgataatatgttcgttttgtgttaaaaatgctactatatttttttctataaactttatcaaacataaaagaaattttattagaaaaaaaagtcaaaacgacttgtaatatgaaatggagggagtactatatttataaatttactctctactttatcattcatcattgaaataaagaatttcatttatttctaacctgtcgatgagtgatactcgtagaccggatgagtagagtattagggtacgttggaatgagggtccacgtagtacgatatcaagcaaacaaaagacaaagattatacaggttcaggccccttgtcaggtaatagctctagtccagtttatatgggattgatggtgataagaatagattataaagagagtagtcgaaatatatggtactgacgagatcgtaatcgatggattcgatgagatctctcggtgagttggctccacgtactccggcttcgtaaactatggtgggtgtgttggcgatagaattggatgcctttcaccccttcctgggggtcccttttataccgtagatcgccttgatccccaagaaaggtttgaggatattggatctggtatggtataacagaaactccatcccttccgagtaggactttggaaatcacttgactcgtagagatattttctataatttgcgatggattccaaacaatattcacgagaacgattcgtgtacatgaaggtataccttatcgatatattccataaattgtaggatagaaggtatgccttatccgtaaccctgacaatagcccccgacttcaactcaaatgaattcatgttgtcatccacgacttctctcgctagcggcttgtcattcttacttgattgttcttggtgcggagccaagaagacgagaagctattgacaacgctaagggaagtccaacggctcaaatatgaatttgaattgaagtctgaacaaccacccttaacgggccttagggtttttcggcggcaatgtctctccttccttggaatacgaaccgccaggtagtacgcctatttaaatgggttttgggatctatttcaagtccgtttgccgaaaaattccccaaccttccagcagcctcggacctttcatctccccaaattccctcggttctttcgtccccctccggagtaacattctaaaatattttcctatttcattgcttacaaatatgccataaagcaatgaagatgatttccaaaaagcctttcctgccaaaacgagatcttgcgatactaatcatctgaaagtattccaagtttggattccaaataattcccagatgttgccaacatcatgcactgaaagaattctaacccttatcattgcttgattttcatatctttatttgcaatcattatgtctcgttctatctttttgttgaatagatatatgtctgaatagcaaccttctcatacatcagcacttagaattaacaagattattcatctagtgacctttagccttttacaagttcatacaccaaaacaagtattttacaagttcgtacactaggttgcattcatacgacaattttgtatacaccgatgcaatttacctacataaagaaagaaaagataaacagatatacaaaatgcacctgtattatcctgacggtataccacggagggaatcttttatatggagtttggttaaagtccacgaagttcgcaatcaaccaatttccgctggataagcccagaacaagtgaagaacaaccaatcaccgctccatcatcgaagcctcccggttgatagcagccagggtggaacgtgctggatttttcataattttgaaagtaactttttctgtagaagcccgtgatgtccgtgcatgtacgcatccgcaccaggtgtgtgtagccatccaagcggccgagccgttccttcgctaccacagccgcgtgcgtcgaaactgtcactgctagctgctcgtgcgtatccactggtgtagtggccgagtatcggagatcacccggagcaaggataataatatagctagctgccggctctataatagtaccatgtcacctatagccatcactaatataataggctggctgttagattagctgtttgtttacctctattgaagatttagatatttaatattcgcatatacacctcatctcctcgtatctggttggaagaaagcagccttttctcgtgtattgcgcttcagtcggacgatagatggaacactcactccatcctttttctttcctttttactcctccacgtcagatttggctgatgcgtagtgtgctagcgccggctgattagagcgcacggctgcacgggccgcgagacgaatctactatctagaatccctttccgtcattttgcgatctagaatcccggagaaattgagctggtgatcaagtcgccatccagcagcacagttgttttgtgctagcaaactccgtatccttccatgttatactctgacacgaacaggaattttgactgaccaattatttgcactgcatttctcagtgccactagatgagcggaaagcacgcacaagataatttgtgatatgataatatgaactcagcgagcgtcactcccagaagaatgcaagaattcgatcagacggtccagatttctgctcgacgaacctccttcctctgtcgcctccttggctttctccttccacaccatggcgttcactcgcatggccttgcctctctccccctccatcgcctcgcgcacgagccgcgccacctccgttctgctcacgttgctgtcgatctccatcccaaccccccacttgtcgcacacgtaccggcagttcgtcggctgctcggcgaagaacggccagcagatcatcggaacgccggcgcatatgctctccagcgtcgagttccacccgcagtgcgtcaggaacaggccgacggacgggtgcgagaggacgagctcttgcgggcaccaactcgccagaacgcccctctctttggtctcgccgacgaactcctccggcagcatggccttctcgccggagacgaggtccggcctgatgacccacaagaacggccggccgcagcaagctaggccccacgcgaactcggccagatga
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| CDS seq | atggctgcggcctcgtcatcgacgtcgtccgctgggtcggcagcgccggctcacgcgccggcggcgggaggtgccggcggcggcggcagcagcggggtaccgaaccaccggacgcggttcggcgacaccacgctgaccaaggtgttcgtcggcggcctggcgtgggagacgccgtccaagggcctgcaggaccactttcagcaatacggcgaaatcctcgaggccgtcgtcatcaccgatcgcgagaccagccgctctaagggctacggattcgtgacgttcagggagccggagtccgcgcgggaggcggtgcggaacccgaacccgacgatcggcggccggcgagccaactgcaacattgcgtccatggggccgccgcgtccgtcgccgtcgcgagggcgggccccacgtgggtccctcttcccggatcagccacacatgggcccgcagccttacatgggcggccggttgccgccgcagcatatgacggccccacctcaacagatgtactaccatcctcagttcgggtactggtacccacaagattatccttaccaacaggcaagcatcccatccatctccttgttcaatcatgccgtgtacaattcacaagcgctacagcattactaccctcagctgtatggtccaacatccccttcaacaccgtcgtaccagtttatggggtacatgccgggtgccctgggtccaagggctggcttctctccgatgcagcaacaagctccacggccacctttcattcagcagcctgcgctgcagttcgacgggggctctttccctccaggaccttctctcccaccggatttcagactccagttgccccctcatgcactctcaaggcaaccagatgaaacaaccggtgctcaatcagctccgccagtctccgcgagtgcagctgcaactccaaccacagacagcaaggaagcatcaaagactaaattcaaccaaacgatctattccggcgctcgaagtgcctccttcctccgttgccgccacggctttctccttccacgccattgctttcgctctcatatccttgcttttctctccatccatggcctcttgcacgagccgtgccacctcctccctcttcacgtcggtgtcaatttccagtccaatgtcccacttggtgcaagccggcagttggtcatctgctcggcgaagaacggccagcagatcatcggcacgccggcgcttatgctctccagcgtcgagttccagccggaatgcgtcaagaacaggccggtcgccggatgctccaggacttgctcttgcgggcaccagctcagaaagatccctctctctttggtctcgctgacgaactcttccggcagcatggccttctcgctggcgacgaggtcgggcctgatgacccacaggaatggccggccgcagcgcgccaacccccacgcgaactcggcgagatga
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| Protein seq | MAAASSSTSSAGSAAPAHAPAAGGAGGGGSSGVPNHRTRFGDTTLTKVFVGGLAWETPSKGLQDHFQQYGEILEAVVITDRETSRSKGYGFVTFREPESAREAVRNPNPTIGGRRANCNIASMGPPRPSPSRGRAPRGSLFPDQPHMGPQPYMGGRLPPQHMTAPPQQMYYHPQFGYWYPQDYPYQQASIPSISLFNHAVYNSQALQHYYPQLYGPTSPSTPSYQFMGYMPGALGPRAGFSPMQQQAPRPPFIQQPALQFDGGSFPPGPSLPPDFRLQLPPHALSRQPDETTGAQSAPPVSASAAATPTTDSKEASKTKFNQTIYSGARSASFLRCRHGFLLPRHCFRSHILAFLSIHGLLHEPCHLLPLHVGVNFQSNVPLGASRQLVICSAKNGQQIIGTPALMLSSVEFQPECVKNRPVAGCSRTCSCGHQLRKIPLSLVSLTNSSGSMAFSLATRSGLMTHRNGRPQRANPHANSAR |
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| Function | Probable RNA-binding protein ARP1 [UniProtKB/Swiss-Prot:Q9M1S3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_02g0034290 | OsKeNa_02g0034290.04 | Chr02 | 32147772 | 32152385 | + | NAM | ||
| CDS seq | atgacggtgatgctaccgaagttgacgtacacgaccgagccgggctgctgggcgtccagccaccgaaggcagctcgcgtcctccttccagagatatcccatgaagccgcaggcgctggtggtccagaacgccggggcaaggatgcccatgtcgctggccactctctgtgcgaagctcatcacgccgtccggtataacgcagctcaccggcggcgtcccgggctcgctgttgagccgcgccaggagggccccgaacgccgcggggccgtgcgtgaggaaggacgtgcagaccgtggggatgtcctgcgtgacgtcgtcgttgtcggattcggacggcggcggcaggccgtccgggatggtctcgaaccggaagtcgtcgaggccggccagcgcgccggtgccgcgggaacggaggaggcggtggtggttgtactcggagttgacgaaggtgacgtggaaccccctggagtggagcaccttggcgaggtgcaggaggggcgtgacgtggccctgcgccgggtacgggatgagcacggcatttctgctcgacgaacctccttcctctgtcgcctccttggctttctccttccacaccatggcgttcactcgcatggccttgcctctctccccctccatcgcctcgcgcacgagccgcgccacctccgttctgctcacgttgctgtcgatctccatcccaaccccccacttgtcgcacacgtaccggcagttcgtcggctgctcggcgaagaacggccagcagatcatcggaacgccggcgcatatgctctccagcgtcgagttccacccgcagtgcgtcaggaacaggccgacggacgggtgcgagaggacgagctcttgcgggcaccaactcgccagaacgcccctctctttggtctcgccgacgaactcctccggcagcatggccttctcgccggagacgaggtccggcctgatgacccacaagaacggccggccgcagcaagctaggccccacgcgaactcggccagatga
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| Protein seq | MTVMLPKLTYTTEPGCWASSHRRQLASSFQRYPMKPQALVVQNAGARMPMSLATLCAKLITPSGITQLTGGVPGSLLSRARRAPNAAGPCVRKDVQTVGMSCVTSSLSDSDGGGRPSGMVSNRKSSRPASAPVPRERRRRWWLYSELTKVTWNPLEWSTLARCRRGVTWPCAGYGMSTAFLLDEPPSSVASLAFSFHTMAFTRMALPLSPSIASRTSRATSVLLTLLSISIPTPHLSHTYRQFVGCSAKNGQQIIGTPAHMLSSVEFHPQCVRNRPTDGCERTSSCGHQLARTPLSLVSPTNSSGSMAFSPETRSGLMTHKNGRPQQARPHANSAR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_02g0034290 | OsKeNa_02g0034290.01 | Chr02 | 32141099 | 32147617 | + | NAM | ||
| CDS seq | atggctgcggcctcgtcatcgacgtcgtccgctgggtcggcagcgccggctcacgcgccggcggcgggaggtgccggcggcggcggcagcagcggggtaccgaaccaccggacgcggttcggcgacaccacgctgaccaaggtgttcgtcggcggcctggcgtgggagacgccgtccaagggcctgcaggaccactttcagcaatacggcgaaatcctcgaggccgtcgtcatcaccgatcgcgagaccagccgctctaagggctacggattcgtgacgttcagggagccggagtccgcgcgggaggcggtgcggaacccgaacccgacgatcggcggccggcgagccaactgcaacattgcgtccatggggccgccgcgtccgtcgccgtcgcgagggcgggccccacgtgggtccctcttcccggatcagccacacatgggcccgcagccttacatgggcggccggttgccgccgcagcatatgacggccccacctcaacagatgtactaccatcctcagttcgggtactggtacccacaagattatccttaccaacagcatgccgtgtacaattcacaagcgctacagcattactaccctcagctgtatggtccaacatccccttcaacaccgtcgtaccagtttatggggtacatgccgggtgccctgggtccaagggctggcttctctccgatgcagcaacaagctccacggccacctttcattcagcagcctgcgctgcagttcgacgggggctctttccctccaggaccttctctcccaccggatttcagactccagttgccccctcatgcactctcaaggcaaccagatgaaacaaccggtgctcaatcagctccgccagtctccgcgagtgcagctgcaactccaaccacagacagcaaggaagcatcaaagactgtagaatcaaattcagatctaaacacctcgaactga
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| Protein seq | MAAASSSTSSAGSAAPAHAPAAGGAGGGGSSGVPNHRTRFGDTTLTKVFVGGLAWETPSKGLQDHFQQYGEILEAVVITDRETSRSKGYGFVTFREPESAREAVRNPNPTIGGRRANCNIASMGPPRPSPSRGRAPRGSLFPDQPHMGPQPYMGGRLPPQHMTAPPQQMYYHPQFGYWYPQDYPYQQHAVYNSQALQHYYPQLYGPTSPSTPSYQFMGYMPGALGPRAGFSPMQQQAPRPPFIQQPALQFDGGSFPPGPSLPPDFRLQLPPHALSRQPDETTGAQSAPPVSASAAATPTTDSKEASKTVESNSDLNTSN
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_02g0034290 | OsKeNa_02g0034290.03 | Chr02 | 32144895 | 32147762 | + | NAM | ||
| CDS seq | atggccaatgggcattcaactccggagggtcccacaccgtactggtacccacaagattatccttaccaacaggcaagcatcccatccatctccttgttcaatcatgccgtgtacaattcacaagcgctacagcattactaccctcagctgtatggtccaacatccccttcaacaccgtcgtaccagtttatggggtacatgccgggtgccctgggtccaagggctggcttctctccgatgcagcaacaagctccacggccacctttcattcagcagcctgcgctgcagttcgacgggggctctttccctccaggaccttctctcccaccggatttcagactccagttgccccctcatgcactctcaaggcaaccagatgaaacaaccggtgctcaatcagctccgccagtctccgcgagtgcagctgcaactccaaccacagacagcaaggaagcatcaaagactaaattcaaccaaacgatctattccggcgctcgaagtgcctccttcctccgttgccgccacggctttctccttccacgccattgctttcgctctcatatccttgcttttctctccatccatggcctcttgcacgagccgtgccacctcctccctcttcacgtcggtgtcaatttccagtccaatgtcccacttggtgcaagccggcagttggtcatctgctcggcgaagaacggccagcagatcatcggcacgccggcgcttatgctctccagcgtcgagttccagccggaatgcgtcaagaacaggccggtcgccggatgctccaggacttgctcttgcgggcaccagctcagaaagatccctctctctttggtctcgctgacgaactcttccggcagcatggccttctcgctggcgacgaggtcgggcctgatgacccacaggaatggccggccgcagcgcgccaacccccacgcgaactcggcgagatga
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| Protein seq | MANGHSTPEGPTPYWYPQDYPYQQASIPSISLFNHAVYNSQALQHYYPQLYGPTSPSTPSYQFMGYMPGALGPRAGFSPMQQQAPRPPFIQQPALQFDGGSFPPGPSLPPDFRLQLPPHALSRQPDETTGAQSAPPVSASAAATPTTDSKEASKTKFNQTIYSGARSASFLRCRHGFLLPRHCFRSHILAFLSIHGLLHEPCHLLPLHVGVNFQSNVPLGASRQLVICSAKNGQQIIGTPALMLSSVEFQPECVKNRPVAGCSRTCSCGHQLRKIPLSLVSLTNSSGSMAFSLATRSGLMTHRNGRPQRANPHANSAR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_02g0034290 | OsKeNa_02g0034290.02 | Chr02 | 32141352 | 32147762 | + | NAM | ||
| CDS seq | atggctgcggcctcgtcatcgacgtcgtccgctgggtcggcagcgccggctcacgcgccggcggcgggaggtgccggcggcggcggcagcagcggggtaccgaaccaccggacgcggttcggcgacaccacgctgaccaaggtgttcgtcggcggcctggcgtgggagacgccgtccaagggcctgcaggaccactttcagcaatacggcgaaatcctcgaggccgtcgtcatcaccgatcgcgagaccagccgctctaagggctacggattcgtgacgttcagggagccggagtccgcgcgggaggcggtgcggaacccgaacccgacgatcggcggccggcgagccaactgcaacattgcgtccatggggccgccgcgtccgtcgccgtcgcgagggcgggccccacgtgggtccctcttcccggatcagccacacatgggcccgcagccttacatgggcggccggttgccgccgcagcatatgacggccccacctcaacagatgtactaccatcctcagttcgggtactggtacccacaagattatccttaccaacaggcaagcatcccatccatctccttgttcaatcatgccgtgtacaattcacaagcgctacagcattactaccctcagctgtatggtccaacatccccttcaacaccgtcgtaccagtttatggggtacatgccgggtgccctgggtccaagggctggcttctctccgatgcagcaacaagctccacggccacctttcattcagcagcctgcgctgcagttcgacgggggctctttccctccaggaccttctctcccaccggatttcagactccagttgccccctcatgcactctcaaggcaaccagatgaaacaaccggtgctcaatcagctccgccagtctccgcgagtgcagctgcaactccaaccacagacagcaaggaagcatcaaagactaaattcaaccaaacgatctattccggcgctcgaagtgcctccttcctccgttgccgccacggctttctccttccacgccattgctttcgctctcatatccttgcttttctctccatccatggcctcttgcacgagccgtgccacctcctccctcttcacgtcggtgtcaatttccagtccaatgtcccacttggtgcaagccggcagttggtcatctgctcggcgaagaacggccagcagatcatcggcacgccggcgcttatgctctccagcgtcgagttccagccggaatgcgtcaagaacaggccggtcgccggatgctccaggacttgctcttgcgggcaccagctcagaaagatccctctctctttggtctcgctgacgaactcttccggcagcatggccttctcgctggcgacgaggtcgggcctgatgacccacaggaatggccggccgcagcgcgccaacccccacgcgaactcggcgagatga
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| Protein seq | MAAASSSTSSAGSAAPAHAPAAGGAGGGGSSGVPNHRTRFGDTTLTKVFVGGLAWETPSKGLQDHFQQYGEILEAVVITDRETSRSKGYGFVTFREPESAREAVRNPNPTIGGRRANCNIASMGPPRPSPSRGRAPRGSLFPDQPHMGPQPYMGGRLPPQHMTAPPQQMYYHPQFGYWYPQDYPYQQASIPSISLFNHAVYNSQALQHYYPQLYGPTSPSTPSYQFMGYMPGALGPRAGFSPMQQQAPRPPFIQQPALQFDGGSFPPGPSLPPDFRLQLPPHALSRQPDETTGAQSAPPVSASAAATPTTDSKEASKTKFNQTIYSGARSASFLRCRHGFLLPRHCFRSHILAFLSIHGLLHEPCHLLPLHVGVNFQSNVPLGASRQLVICSAKNGQQIIGTPALMLSSVEFQPECVKNRPVAGCSRTCSCGHQLRKIPLSLVSLTNSSGSMAFSLATRSGLMTHRNGRPQRANPHANSAR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A5 | Chr02 | 32145729 | 32146129 | + | OsKeNa_02g0034290.02,OsKeNa_02g0034290.03 | OsKeNa_02g0034290.03,OsKeNa_02g0034290.02,OsKeNa_02g0034290.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.054689 | 7.940724 | 0.389276 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0755400 | RBH | 0.0 | 0.072805 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g51890 | RBH | 0.0 | 0.037928 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0755400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0034210 | RBH | 0.000000 | 18.580578 | 1.484054 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0008130 | RBH | 0.0 | 0.0 | 0.213563 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0034180 | RBH | 0.000000 | 12.055593 | 2.363864 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0033760 | RBH | 0.000000 | 0.509760 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0030860 | SBH | 2.886688 | 9.308311 | 9.762928 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0519600 | RBH | 2.159525 | 11.791919 | 3.139968 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0033650 | RBH | 0.000000 | 2.235304 | 0.139630 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0549900 | RBH | 3.068557 | 22.065066 | 3.144946 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0033910 | RBH | 0.104869 | 0.401378 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0033740 | RBH | 0.000000 | 11.697009 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0034040 | RBH | 0.000000 | 12.445276 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0033940 | RBH | 0.156940 | 1.531204 | 0.098003 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0033540 | RBH | 0.000000 | 8.729742 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G034220 | RBH | 0.000000 | 5.001235 | 0.754806 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0033930 | RBH | 1.374697 | 36.677555 | 1.963953 |
