Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsCMeo_02g0034180 OGI:02089910 | 16/16 CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) Chr02:32372562-32383848
Gene Symbol -
DNA seq

agtaagagtattatagtagcagtcgattggaagctagactagaaagggtgacgcagctgtcatcccacaccggaaaccctctcttccagcgcatagcccctgtccatctctccctcctccgagtcttctcctctcctcttaacaaatccctcttcctctgcttcctcctctaccttcctaagcctgagaaggtgggagaggttatggaagaagagttagagtactactacttggaaagcgaggagttgggagcaaacacgatagaggctgatccctgtacgagacggcgaaatcggccccgccactattaatcgagtttgattgccatatataggtgtaggaacgggaccgggaaagagttcgatcgttataggatcattgatcgatcaatccatagtcttgcgaagggagaagcaagcggcggcgcgtacgtacgtcatggctgcggcctcgtcatcgacgtcgtccgctgggtcggcagcgccggctcacgcgccggcggcgggaggtgccggcggcggcggcagcagcggggtaccgaaccaccggacgcggttcggcgacaccacgctgaccaaggtgttcgtcggcggcctggcgtgggagacgccgtccaagggcctgcaggaccactttcagcaatacggcgaaatcctcgaggccgtcgtcatcaccgatcgcgagaccagccgctctaagggctacggattcgtacgtccctcctctttctcgccgacgagatgatcgctcgccgccgtgcatgcatgtattcatgtgcttgatcgatctgacacgagatgcatctgtgtcgacgcaggtgacgttcagggagccggagtccgcgcgggaggcggtgcggaacccgaacccgacgatcggcggccggcgagccaactgcaacattgcgtccatggggccgccgcgtccgtcgccgtcgcgaggtgagcaaattaacccgacgaacccccaaaaccaaatcaatgcctctctttccattacttgccagaacaaggcacgcgcatgtgcatggcagcaataactgggccatgattagcggtaaaccgattgcccgcacgcaatcaaaccggataagcttcgattagggcactccgccaatttttttttacccttgctttttttcccctcctcttcttcgtcgtcctccttgcgtgcgctgcggtggtgggtcgtgttggcatggcagatgggtggggcccaggtccagcttgctaaaagcctaaaacactgggcgccagcacacagtaaggaggacgacgactactacgagtactgcgtctgcattgggaggggaggcaggatcagacatcacattaccatgcctcatggctgcgtgtgcttgcttggccagctagcctggcctcacagcagttactacaggtttactacccctaattatctgcagcatttgctgcaccttcgtaccacacagtagtaggcgcgttgatctgtttggtagttgctgattaattagattaattagcgtaatcttggcagatttgtggttatgggatggttgattaattagtggggatgaactttctcttttatgatcttatattctttttttcttattgggagagaatttgctattgggagagaatttgggtggtttgactagagaatgcagtggcgatatgataaatcgttccagcgagaatgaggtgtaaaggggttgggagattgtagctggagaatcaggaatccccggcggccgccttcctttcttttctggtgaaaatcgatcggtgcgggggcattagaaaaatgcttcatagcatataccactctttcgcagtctttgaccggtatggttgggtaccaactgccaacgattggaggaagaataggtgctagctagcacagttcaatgttgtggctacttcgcatcaagtgtgttgggtccagtatccccttgtttctttagcttcactttcacttcattttgtgctcatccatatagggagatagtacatatcatttgcgtttcttacaatgcagcacgcacacatgcatgcccttatgactttaagccgtactgtgggtgagatgaaaacctgcatatgttttcctttcaaaaagaagagagagaacatgcatataccgctgatatcgtctagctattatattacgagaccttggtgcttttcataaaagaaaatacacacgaggggttacacagatgggttgtatacttgtattggtccttcaagttttttctccttttcatgctagaacaattgggacatcatactatttttatacaaaagaaaattgttgtttggtgcactacagcacaacagtgcctaaatggagttggttgtagtgctagctagctaaaaacagtcttgaattgtttggcggtgtgctaatctctaccaaaagaaacttctaaaaattcttctccattcgccatctaaaaatagaacaaaaatgctggtgtccttttgtgctgagaaactgattttttatgttactattagacagttaatattaacctttttagagggatcacaactcagtagttataatattatagtatcatttgctacttgcacccatgcatgttagtcaaacccagtcaatgtaaggagcacatggtaacacctctgtgcacagtccatacaactgttttgcaagccttgccctactggctactgtacgctatacatacatgcatacacctgctacccctgcacagttcatttattttccttgagtcattgtgtgtgttgttttctctgcagcctataacatgccattttgccatgcctaacatcatttcccctcgtttgtctctctgcagggcgggccccacgtgggtccctcttcccggatcagccacacatgggcccgcagccttacatgggcggccggttgccgccgcagcatatgacggccccacctcaacagatgtactaccatcctcagttcgggtgagtatcaaacttcttctttcctcttcttttttttaatcttttttcctctataaagccatcggatgcagcacgactcagaccccacgattacgatgatgcatggataatgaatacgtacaaccatcgtccaaaaaacacgcactagtatattgcaccgtcgtcatcgtgggatccgagccacgctgcaaattaacctgaaccttatcgatcagcggctgtgcatgcgacagcagctaagcattagctacacgtccatatcagcaccatgtcattccctctttgggagtttgcaccgtgtttccttgttagagcctagctgtaaattgcactgcaatgcacaaaaaggataaataggctgtttaggtagtgaggcctccgcgtcattggtgattggaactggtggttcatggagacgtatgcggtttttatccatgtgggtttttgaggtagacatttggagcccttattttgtcgaaagagatggtaccttattactaactgatctcggaggtaaacgggtggagtagtagacaagaaagtcgttgctgctaatgcacggtgattggagaggctgatctttttattgtactagctgatgggggtagctagtaccgaattggcgcctgctgctgcgtctcattttcacggcaatgactagtgtgtgaggtcccgttcctttcgtggcagcagctttccgtggttcgttttccttaattgggcagaagggttcagttgccaaggagcacagagggcccacgtgtccccattcccactcctgttgggccctgcgtgatggcccattaagcctgggccgatgggagggagacagcagctcagcaatggccaatgggcattcaactccggagggtcccacaccgtctctctctctagagtctagaccaccatggggtgttgccttcccagcaaacacactctgcactttgttggttttctgccgagttaaatgtctgcattcagatctgatgccacttggctgctgctatgcaatttgcctctttagtttgttttagttataaccgtggacctgtacagatcgttgaaacaggaatgcatgtgtggcatggcatgtacgggattttaaatttggttatattttgctaagaaccaccgctgaactagtagttgagttgtttctgcctttctcatatgcaaatgtaaaattagacgatctgaaagttactcttgatcttgatttttcttgaaaaaaggttaataatgttttatgtggatatttttgcacaaagtttattttaaaaaacagagtccagttttgtttttgacaaatgacaataactgcacttttatttgatgggggttatgatttagccagccaattgcttttaggttcatacaatttgtacaagaaatgaggaatttagaacccttttcctatgaactgctgctgccactgaaaaactggaagtacaagaaatgggaaaagtttattgctctagttttagctagaatagattgtgtatatatgagataagtttgggctttacagccaagatagttggtagatatgtctgctgtctccaagagaatggtgggactcatgttcggctcaatccctctcaatcttttacaacgcactaaagaaattatgcaaacttttgcaggtactggtacccacaagattatccttaccaacaggcaagcatcccatccatctccttgttcaatgtttgacgttttacttccatcacatgcgattggttcttgctacatgcatctccaataatttggtaacagtacacaaagaatagataagtttcacagttggcgttcatgttctgaaactctgaactcacaacagctaaagttgtgtcctgcacctcaaaagcttgaatactctaacatttagtagtattgattatctgcacatattttctatacaccagagcactaagttatagtaatagacatcagcacaagtactatcatcttatttttcccatctaacaatatatactggaagtatctagagtctgaatcatcttattttccatgtgtcaatatgtgctgaaactatccaatgtctgaactcctcagcatgccgtgtacaattcacaagcgctacagcattactaccctcagctgtatggtccaacatccccttcaacaccgtcgtaccagtttatggggtacatgccgggtgccctgggtccaagggctggcttctctccgatgcagcaacaagctccacggccacctttcattcagcagcctgcgctgcagttcgacgggggctctttccctccaggaccttctctcccaccggatttcagactccagttgccccctcatgcactctcaaggcaaccagatgaaacaaccggtatgtcattgttagcctaccattcagatatctattactgtcatttagaaacatagtacgttcttgtcacagttgacatcatttagaaacaacaccatcgtgacaaatttatgcctgactactgctgaatatgttgcaggtgctcaatcagctccgccagtctccgcgagtgcagctgcaactccaaccacagacagcaaggaagcatcaaagactgtagaatcaaattcagatctaaacacctcgaactgacttggtgaactgaaaattcttccgaaatgactcaatgtcagcccacatggtgccatggtggtctgtaacagggctccaagcactcatttcttgactgaaaaaaagcaccaaaagaattgttctttcattatttcatattcttttccaattttcacaatgcatttcttcggtgaatccattgtatggcccaactgaacttcacgaaaaaaaatctgtaattttccataatatcttccggcgcgtgctgttgttatctcttacatgcaccatccgtctggattactagtttacaaccaggtctttaccaatttaccattgttacagaatagatgatcatgatggagcatcttactacgacaggtgaaactgaaaccatccacaaacctgaaatactgactagtgacattggtgaagcagaggctgtctaacctgaaattattgttgatctttgttctccactccagaactaatatttgatatttctaacaagatagtgggagatggtcacatcatagattcatttacccaattacaaatcgcatttttaggattgatcaacaacaacaatattcagcttgcgtgatcacctcttgcaagcagaaattcaaccaaacgatctattccggcgctcgaagtgcctccttcctccgttgccgccacggctttctccttccacgccattgctttcgctctcatatccttgcttttctctccatccatggcctcttgcacgagccgtgccacctcctccctcttcacgtcggtgtcaatttccagtccaatgtcccacttggtgcaagcgtagcggcagttggtcatctgctcggcgaagaacggccagcagatcatcggcacgccggcgcttatgctctccagcgtcgagttccagccggaatgcgtcaagaacaggccggtcgccggatgctccaggacttgctcttgcgggcaccagctcagaaagatccctctctctttggtctcgctgacgaactcttccggcagcatggccttctcgctggcgacgaggtcgggcctgatgacccacaggaatggccggccgcagcgcgccaacccccacgcgaactcggcgagatgagccggcgacatgacggtgatgctaccgaagttgacgtacacgaccgagccgggctgctgggcgtccagccaccgaaggcagctcgcgtcctccttccagaggttgccgccgatcgcgcccacctcggggcgccgcgccgctgcggcccccgcgaacgtcaggagcgggccgactgtgtacacgcgcgggaagatgcggcgcagcgcgtcgacgacgtcgtgctccaccgcgtcgaacgtgttgaggatgaggccctgcgcgtggcgcgcgttctgcgcctcgccgctgtcgaagttgagcatgaactcgtcccggtcggtcgtgcggatgaagctgggcatgtcgcgcagccggatgcctggcatccccggcacccagtcgagcacggtgtcgaggtatccgttggtcaggtagctctcatctgcaacatgtccatgcatgagcaaaaacattttaccgtgcgtacagccatacacaataaaacggtaatcgtgagttcaagtgtactacctttgagtggcacgtagcctctgtcgatgagctcggcgtagtggagatatcccatgaagccgcaggcgctggtggtccagaacgccggggcaaggatgcccatgtcgctggccactctctgtgcgaagctcatcacgccgtccggtataacgcagctcaccggcggcgtcccgggctcgctgttgagccgcgccaggagggccccgaacgccgcggggccgtgcgtgaggaaggacgtgcagaccgtggggatgtcctgcgtgacgtcgtcgttgtcggattcggacggcggcggcaggccgtccgggatggtctcgaaccggaagtcgtcgaggccggccagcgcgccggtgccgcgggaacggaggaggcggtggtggttgtactcggagttgacgaaggtgacgtggaaccccctggagtggagcaccttggcgaggtgcaggaggggcgtgacgtggccctgcgccgggtacgggatgagcacggcgtgcaggcgcgagtttgagcccatggcaagcgatacgattgataccaaagtagagtacgtagtaacaattataggagtaactagcagtcggtactccgggattaaatgttagaggcggcagttaatgtgcaatagttgatccccttcacgatcatctattactcccgattctgagcttaaaattttcctaaaataaaaggagaaaattatattggtggtatacaaatgatgtgcgttagttgggtgtaatttgtagatgaacttctgaaatgctatttatgcacgaacttatctagttcatgcaaaacaagactaaaatagctttgtaaagttaattttaccaaagcgtgacattcattcatgtagttagtatgtataagatatccactcttctgtttcatattataagtcgctttgatttttttctagtcaaattttgttaagtttggctaaatttatagaaaaaactagcaacattttaaacacgaaattacattcattaaatctagcattaaatatattttgataatatgttcgttttgtgttaaaaatgctactatatttttttctataaactttatcaaacataaaagaaattttattagaaaaaaaagtcaaaacgacttgtaatatgaaatggagggagtactatatttataaatttactctctactttatcattcatcattgaaataaagaatttcatttatttctaacctgtcgatgagtgatactcgtagaccggatgagtagagtattagggtacgttggaatgagggtccacgtagtacgatatcaagcaaacaaaagacaaagattatacaggttcaggccccttgtcaggtaatagctctagtccagtttatatgggattgatggtgataagaatagattataaagagagtagtcgaaatatatggtactgacgagatcgtaatcgatggattcgatgagatctctcggtgagttggctccacgtactccggcttcgtaaactatggtgggtgtgttggcgatagaattggatgcctttcaccccttcctgggggtcccttttataccgtagatcgccttgatccccaagaaaggtttgaggatattggatctggtatggtataacagaaactccatcccttccgagtaggactttggaaatcacttgactcgtagagatattttctataatttgcgatggattccaaacaatattcacgagaacgattcgtgtacatgaaggtataccttatcgatatattccataaattgtaggatagaaggtatgccttatccgtaaccctgacaatagcccccgacttcaactcaaatgaattcatgttgtcatccacgacttctctcgctagcggcttgtcattcttacttgattgttcttggtgcggagccaagaagacgagaagctattgacaacgctaagggaagtccaacggctcaaatatgaatttgaattgaagtctgaacaaccacccttaacgggccttagggtttttcggcggcaatgtctctccttccttggaatacgaaccgccaggtagtacgcctatttaaatgggttttgggatctatttcaagtccgtttgccgaaaaattccccaaccttccagcagcctcggacctttcatctccccaaattccctcggttctttcgtccccctccggagtaacattctaaaatattttcctatttcattgcttacaaatatgccataaagcaatgaagatgatttccaaaaagcctttcctgccaaaacgagatcttgcgatactaatcatctgaaagtattccaagtttggattccaaataattcccagatgttgccaacatcatgcactgaaagaattctaacccttatcattgcttgattttcatatctttatttgcaatcattatgtctcgttctatctttttgttgaatagatatatgtctgaatagcaaccttctcatacatcagcacttagaattaacaagattattcatctagtgacctttagccttttacaagttcatacaccaaaacaagtattttacaagttcgtacactaggttgcattcatacgacaattttgtatacaccgatgcaatttacctacataaagaaagaaaagataaacagatatacaaaatgcacctgtattatcctgacggtataccacggagggaatcttttatatggagtttggttaaagtccacgaagttcgcaatcaaccaatttccgctggataagcccagaacaagtgaagaacaaccaatcaccgctccatcatcgaagcctcccggttgatagcagccagggtggaacgtgctggatttttcataattttgaaagtaactttttctgtagaagcccgtgatgtccgtgcatgtacgcatccgcaccaggtgtgtgtagccatccaagcggccgagccgttccttcgctaccacagccgcgtgcgtcgaaactgtcactgctagctgctcgtgcgtatccactggtgtagtggccgagtatcggagatcacccggagcaaggataataatatagctagctgccggctctataatagtaccatgtcacctatagccatcactaatataataggctggctgttagattagctgtttgtttacctctattgaagatttagatatttaatattcgcatatacacctcatctcctcgtatctggttggaagaaagcagccttttctcgtgtattgcgcttcagtcggacgatagatggaacactcactccatcctttttctttcctttttactcctccacgtcagatttggctgacgcgtagtgtgctagcgccggctgattagagcgcacggctgcacgggccgcgagacgaatctactatctagaatccctttccgtcattttgcgatctagaatcccggagaaattgagctggtgatcaagtcgccatccagcagcacagttgttttgtgctagcaaactccgtatccttccatgttatactctgacacgaacaggaattttgactgaccaattatttgcactgcatttctcagtgccactagatgagcggaaagcacgcacaagataatttgtgatatgataatatgaactcagcgagcgtcactcccagaagaatgcaagaattcgatcagacggtccagatttctgctcgacgaacctccttcctctgtcgcctccttggctttctccttccacaccatggcgttcactcgcatggccttgcctctctccccctccatcgcctcgcgcacgagccgcgccacctccgttctgctcacgttgctgtcgatctccatcccaaccccccacttgtcgcacacgtaccggcagttcgtcggctgctcggcgaagaacggccagcagatcatcggaacgccggcgcatatgctctccagcgtcgagttccacccgcagtgcgtcaggaacaggccgacggacgggtgcgagaggacgagctcttgcgggcaccaactcgccagaacgcccctctctttggtctcgccgacgaactcctccggcagcatggccttctcgccggagacgaggtccggcctgatgacccacaagaacggccggccgcagcaagctaggccccacgcgaactcggccagatga

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CDS seq

atggctgcggcctcgtcatcgacgtcgtccgctgggtcggcagcgccggctcacgcgccggcggcgggaggtgccggcggcggcggcagcagcggggtaccgaaccaccggacgcggttcggcgacaccacgctgaccaaggtgttcgtcggcggcctggcgtgggagacgccgtccaagggcctgcaggaccactttcagcaatacggcgaaatcctcgaggccgtcgtcatcaccgatcgcgagaccagccgctctaagggctacggattcgtgacgttcagggagccggagtccgcgcgggaggcggtgcggaacccgaacccgacgatcggcggccggcgagccaactgcaacattgcgtccatggggccgccgcgtccgtcgccgtcgcgagggcgggccccacgtgggtccctcttcccggatcagccacacatgggcccgcagccttacatgggcggccggttgccgccgcagcatatgacggccccacctcaacagatgtactaccatcctcagttcggcatgccgtgtacaattcacaagcgctacagcattactaccctcagctgtatggtccaacatccccttcaacaccgtcgtaccagtttatggggtacatgccgggtgccctgggtccaagggctggcttctctccgatgcagcaacaagctccacggccacctttcattcagcagcctgcgctgcagttcgacgggggctctttccctccaggaccttctctcccaccggatttcagactccagttgccccctcatgcactctcaaggcaaccagatgaaacaaccggtgctcaatcagctccgccagtctccgcgagtgcagctgcaactccaaccacagacagcaaggaagcatcaaagactaatagatgatcatgatggagcatcttactacgacaggattgatcaacaacaacaatattcagcttgcgtgatcacctcttgcaagcagaaattcaaccaaacgatctattccggcgctcgaagtgcctccttcctccgttgccgccacggctttctccttccacgccattgctttcgctctcatatccttgcttttctctccatccatggcctcttgcacgagccgtgccacctcctccctcttcacgtcggtgtcaatttccagtccaatgtcccacttggtgcaagccggcagttggtcatctgctcggcgaagaacggccagcagatcatcggcacgccggcgcttatgctctccagcgtcgagttccagccggaatgcgtcaagaacaggccggtcgccggatgctccaggacttgctcttgcgggcaccagctcagaaagatccctctctctttggtctcgctgacgaactcttccggcagcatggccttctcgctggcgacgaggtcgggcctgatgacccacaggaatggccggccgcagcgcgccaacccccacgcgaactcggcgagatga

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Protein seq

MAAASSSTSSAGSAAPAHAPAAGGAGGGGSSGVPNHRTRFGDTTLTKVFVGGLAWETPSKGLQDHFQQYGEILEAVVITDRETSRSKGYGFVTFREPESAREAVRNPNPTIGGRRANCNIASMGPPRPSPSRGRAPRGSLFPDQPHMGPQPYMGGRLPPQHMTAPPQQMYYHPQFGMPCTIHKRYSITTLSCMVQHPLQHRRTSLWGTCRVPWVQGLASLRCSNKLHGHLSFSSLRCSSTGALSLQDLLSHRISDSSCPLMHSQGNQMKQPVLNQLRQSPRVQLQLQPQTARKHQRLIDDHDGASYYDRIDQQQQYSACVITSCKQKFNQTIYSGARSASFLRCRHGFLLPRHCFRSHILAFLSIHGLLHEPCHLLPLHVGVNFQSNVPLGASRQLVICSAKNGQQIIGTPALMLSSVEFQPECVKNRPVAGCSRTCSCGHQLRKIPLSLVSLTNSSGSMAFSLATRSGLMTHRNGRPQRANPHANSAR

Function Probable RNA-binding protein ARP1 [UniProtKB/Swiss-Prot:Q9M1S3]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsCMeo_02g0034180 OsCMeo_02g0034180.05 Chr02 32379235 32383848 + NAM
CDS seq

atgacggtgatgctaccgaagttgacgtacacgaccgagccgggctgctgggcgtccagccaccgaaggcagctcgcgtcctccttccagagatatcccatgaagccgcaggcgctggtggtccagaacgccggggcaaggatgcccatgtcgctggccactctctgtgcgaagctcatcacgccgtccggtataacgcagctcaccggcggcgtcccgggctcgctgttgagccgcgccaggagggccccgaacgccgcggggccgtgcgtgaggaaggacgtgcagaccgtggggatgtcctgcgtgacgtcgtcgttgtcggattcggacggcggcggcaggccgtccgggatggtctcgaaccggaagtcgtcgaggccggccagcgcgccggtgccgcgggaacggaggaggcggtggtggttgtactcggagttgacgaaggtgacgtggaaccccctggagtggagcaccttggcgaggtgcaggaggggcgtgacgtggccctgcgccgggtacgggatgagcacggcatttctgctcgacgaacctccttcctctgtcgcctccttggctttctccttccacaccatggcgttcactcgcatggccttgcctctctccccctccatcgcctcgcgcacgagccgcgccacctccgttctgctcacgttgctgtcgatctccatcccaaccccccacttgtcgcacacgtaccggcagttcgtcggctgctcggcgaagaacggccagcagatcatcggaacgccggcgcatatgctctccagcgtcgagttccacccgcagtgcgtcaggaacaggccgacggacgggtgcgagaggacgagctcttgcgggcaccaactcgccagaacgcccctctctttggtctcgccgacgaactcctccggcagcatggccttctcgccggagacgaggtccggcctgatgacccacaagaacggccggccgcagcaagctaggccccacgcgaactcggccagatga

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Protein seq

MTVMLPKLTYTTEPGCWASSHRRQLASSFQRYPMKPQALVVQNAGARMPMSLATLCAKLITPSGITQLTGGVPGSLLSRARRAPNAAGPCVRKDVQTVGMSCVTSSLSDSDGGGRPSGMVSNRKSSRPASAPVPRERRRRWWLYSELTKVTWNPLEWSTLARCRRGVTWPCAGYGMSTAFLLDEPPSSVASLAFSFHTMAFTRMALPLSPSIASRTSRATSVLLTLLSISIPTPHLSHTYRQFVGCSAKNGQQIIGTPAHMLSSVEFHPQCVRNRPTDGCERTSSCGHQLARTPLSLVSPTNSSGSMAFSPETRSGLMTHKNGRPQQARPHANSAR

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Gene Transcript Chromosome Start End Strand Source
OsCMeo_02g0034180 OsCMeo_02g0034180.04 Chr02 32376358 32379225 + NAM
CDS seq

atggccaatgggcattcaactccggagggtcccacaccgtactggtacccacaagattatccttaccaacaggcaagcatcccatccatctccttgttcaatcatgccgtgtacaattcacaagcgctacagcattactaccctcagctgtatggtccaacatccccttcaacaccgtcgtaccagtttatggggtacatgccgggtgccctgggtccaagggctggcttctctccgatgcagcaacaagctccacggccacctttcattcagcagcctgcgctgcagttcgacgggggctctttccctccaggaccttctctcccaccggatttcagactccagttgccccctcatgcactctcaaggcaaccagatgaaacaaccggtgctcaatcagctccgccagtctccgcgagtgcagctgcaactccaaccacagacagcaaggaagcatcaaagactaaattcaaccaaacgatctattccggcgctcgaagtgcctccttcctccgttgccgccacggctttctccttccacgccattgctttcgctctcatatccttgcttttctctccatccatggcctcttgcacgagccgtgccacctcctccctcttcacgtcggtgtcaatttccagtccaatgtcccacttggtgcaagccggcagttggtcatctgctcggcgaagaacggccagcagatcatcggcacgccggcgcttatgctctccagcgtcgagttccagccggaatgcgtcaagaacaggccggtcgccggatgctccaggacttgctcttgcgggcaccagctcagaaagatccctctctctttggtctcgctgacgaactcttccggcagcatggccttctcgctggcgacgaggtcgggcctgatgacccacaggaatggccggccgcagcgcgccaacccccacgcgaactcggcgagatga

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Protein seq

MANGHSTPEGPTPYWYPQDYPYQQASIPSISLFNHAVYNSQALQHYYPQLYGPTSPSTPSYQFMGYMPGALGPRAGFSPMQQQAPRPPFIQQPALQFDGGSFPPGPSLPPDFRLQLPPHALSRQPDETTGAQSAPPVSASAAATPTTDSKEASKTKFNQTIYSGARSASFLRCRHGFLLPRHCFRSHILAFLSIHGLLHEPCHLLPLHVGVNFQSNVPLGASRQLVICSAKNGQQIIGTPALMLSSVEFQPECVKNRPVAGCSRTCSCGHQLRKIPLSLVSLTNSSGSMAFSLATRSGLMTHRNGRPQRANPHANSAR

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Gene Transcript Chromosome Start End Strand Source
OsCMeo_02g0034180 OsCMeo_02g0034180.02 Chr02 32372815 32379225 + NAM
CDS seq

atggctgcggcctcgtcatcgacgtcgtccgctgggtcggcagcgccggctcacgcgccggcggcgggaggtgccggcggcggcggcagcagcggggtaccgaaccaccggacgcggttcggcgacaccacgctgaccaaggtgttcgtcggcggcctggcgtgggagacgccgtccaagggcctgcaggaccactttcagcaatacggcgaaatcctcgaggccgtcgtcatcaccgatcgcgagaccagccgctctaagggctacggattcgtgacgttcagggagccggagtccgcgcgggaggcggtgcggaacccgaacccgacgatcggcggccggcgagccaactgcaacattgcgtccatggggccgccgcgtccgtcgccgtcgcgagggcgggccccacgtgggtccctcttcccggatcagccacacatgggcccgcagccttacatgggcggccggttgccgccgcagcatatgacggccccacctcaacagatgtactaccatcctcagttcgggtactggtacccacaagattatccttaccaacaggcaagcatcccatccatctccttgttcaatcatgccgtgtacaattcacaagcgctacagcattactaccctcagctgtatggtccaacatccccttcaacaccgtcgtaccagtttatggggtacatgccgggtgccctgggtccaagggctggcttctctccgatgcagcaacaagctccacggccacctttcattcagcagcctgcgctgcagttcgacgggggctctttccctccaggaccttctctcccaccggatttcagactccagttgccccctcatgcactctcaaggcaaccagatgaaacaaccggtgctcaatcagctccgccagtctccgcgagtgcagctgcaactccaaccacagacagcaaggaagcatcaaagactaaattcaaccaaacgatctattccggcgctcgaagtgcctccttcctccgttgccgccacggctttctccttccacgccattgctttcgctctcatatccttgcttttctctccatccatggcctcttgcacgagccgtgccacctcctccctcttcacgtcggtgtcaatttccagtccaatgtcccacttggtgcaagccggcagttggtcatctgctcggcgaagaacggccagcagatcatcggcacgccggcgcttatgctctccagcgtcgagttccagccggaatgcgtcaagaacaggccggtcgccggatgctccaggacttgctcttgcgggcaccagctcagaaagatccctctctctttggtctcgctgacgaactcttccggcagcatggccttctcgctggcgacgaggtcgggcctgatgacccacaggaatggccggccgcagcgcgccaacccccacgcgaactcggcgagatga

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Protein seq

MAAASSSTSSAGSAAPAHAPAAGGAGGGGSSGVPNHRTRFGDTTLTKVFVGGLAWETPSKGLQDHFQQYGEILEAVVITDRETSRSKGYGFVTFREPESAREAVRNPNPTIGGRRANCNIASMGPPRPSPSRGRAPRGSLFPDQPHMGPQPYMGGRLPPQHMTAPPQQMYYHPQFGYWYPQDYPYQQASIPSISLFNHAVYNSQALQHYYPQLYGPTSPSTPSYQFMGYMPGALGPRAGFSPMQQQAPRPPFIQQPALQFDGGSFPPGPSLPPDFRLQLPPHALSRQPDETTGAQSAPPVSASAAATPTTDSKEASKTKFNQTIYSGARSASFLRCRHGFLLPRHCFRSHILAFLSIHGLLHEPCHLLPLHVGVNFQSNVPLGASRQLVICSAKNGQQIIGTPALMLSSVEFQPECVKNRPVAGCSRTCSCGHQLRKIPLSLVSLTNSSGSMAFSLATRSGLMTHRNGRPQRANPHANSAR

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Gene Transcript Chromosome Start End Strand Source
OsCMeo_02g0034180 OsCMeo_02g0034180.01 Chr02 32372562 32379080 + NAM
CDS seq

atggctgcggcctcgtcatcgacgtcgtccgctgggtcggcagcgccggctcacgcgccggcggcgggaggtgccggcggcggcggcagcagcggggtaccgaaccaccggacgcggttcggcgacaccacgctgaccaaggtgttcgtcggcggcctggcgtgggagacgccgtccaagggcctgcaggaccactttcagcaatacggcgaaatcctcgaggccgtcgtcatcaccgatcgcgagaccagccgctctaagggctacggattcgtgacgttcagggagccggagtccgcgcgggaggcggtgcggaacccgaacccgacgatcggcggccggcgagccaactgcaacattgcgtccatggggccgccgcgtccgtcgccgtcgcgagggcgggccccacgtgggtccctcttcccggatcagccacacatgggcccgcagccttacatgggcggccggttgccgccgcagcatatgacggccccacctcaacagatgtactaccatcctcagttcgggtactggtacccacaagattatccttaccaacagcatgccgtgtacaattcacaagcgctacagcattactaccctcagctgtatggtccaacatccccttcaacaccgtcgtaccagtttatggggtacatgccgggtgccctgggtccaagggctggcttctctccgatgcagcaacaagctccacggccacctttcattcagcagcctgcgctgcagttcgacgggggctctttccctccaggaccttctctcccaccggatttcagactccagttgccccctcatgcactctcaaggcaaccagatgaaacaaccggtgctcaatcagctccgccagtctccgcgagtgcagctgcaactccaaccacagacagcaaggaagcatcaaagactgtagaatcaaattcagatctaaacacctcgaactga

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Protein seq

MAAASSSTSSAGSAAPAHAPAAGGAGGGGSSGVPNHRTRFGDTTLTKVFVGGLAWETPSKGLQDHFQQYGEILEAVVITDRETSRSKGYGFVTFREPESAREAVRNPNPTIGGRRANCNIASMGPPRPSPSRGRAPRGSLFPDQPHMGPQPYMGGRLPPQHMTAPPQQMYYHPQFGYWYPQDYPYQQHAVYNSQALQHYYPQLYGPTSPSTPSYQFMGYMPGALGPRAGFSPMQQQAPRPPFIQQPALQFDGGSFPPGPSLPPDFRLQLPPHALSRQPDETTGAQSAPPVSASAAATPTTDSKEASKTVESNSDLNTSN

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Gene Transcript Chromosome Start End Strand Source
OsCMeo_02g0034180 OsCMeo_02g0034180.03 Chr02 32372815 32379225 + NAM
CDS seq

atggctgcggcctcgtcatcgacgtcgtccgctgggtcggcagcgccggctcacgcgccggcggcgggaggtgccggcggcggcggcagcagcggggtaccgaaccaccggacgcggttcggcgacaccacgctgaccaaggtgttcgtcggcggcctggcgtgggagacgccgtccaagggcctgcaggaccactttcagcaatacggcgaaatcctcgaggccgtcgtcatcaccgatcgcgagaccagccgctctaagggctacggattcgtgacgttcagggagccggagtccgcgcgggaggcggtgcggaacccgaacccgacgatcggcggccggcgagccaactgcaacattgcgtccatggggccgccgcgtccgtcgccgtcgcgagggcgggccccacgtgggtccctcttcccggatcagccacacatgggcccgcagccttacatgggcggccggttgccgccgcagcatatgacggccccacctcaacagatgtactaccatcctcagttcggcatgccgtgtacaattcacaagcgctacagcattactaccctcagctgtatggtccaacatccccttcaacaccgtcgtaccagtttatggggtacatgccgggtgccctgggtccaagggctggcttctctccgatgcagcaacaagctccacggccacctttcattcagcagcctgcgctgcagttcgacgggggctctttccctccaggaccttctctcccaccggatttcagactccagttgccccctcatgcactctcaaggcaaccagatgaaacaaccggtgctcaatcagctccgccagtctccgcgagtgcagctgcaactccaaccacagacagcaaggaagcatcaaagactaatagatgatcatgatggagcatcttactacgacaggattgatcaacaacaacaatattcagcttgcgtgatcacctcttgcaagcagaaattcaaccaaacgatctattccggcgctcgaagtgcctccttcctccgttgccgccacggctttctccttccacgccattgctttcgctctcatatccttgcttttctctccatccatggcctcttgcacgagccgtgccacctcctccctcttcacgtcggtgtcaatttccagtccaatgtcccacttggtgcaagccggcagttggtcatctgctcggcgaagaacggccagcagatcatcggcacgccggcgcttatgctctccagcgtcgagttccagccggaatgcgtcaagaacaggccggtcgccggatgctccaggacttgctcttgcgggcaccagctcagaaagatccctctctctttggtctcgctgacgaactcttccggcagcatggccttctcgctggcgacgaggtcgggcctgatgacccacaggaatggccggccgcagcgcgccaacccccacgcgaactcggcgagatga

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Protein seq

MAAASSSTSSAGSAAPAHAPAAGGAGGGGSSGVPNHRTRFGDTTLTKVFVGGLAWETPSKGLQDHFQQYGEILEAVVITDRETSRSKGYGFVTFREPESAREAVRNPNPTIGGRRANCNIASMGPPRPSPSRGRAPRGSLFPDQPHMGPQPYMGGRLPPQHMTAPPQQMYYHPQFGMPCTIHKRYSITTLSCMVQHPLQHRRTSLWGTCRVPWVQGLASLRCSNKLHGHLSFSSLRCSSTGALSLQDLLSHRISDSSCPLMHSQGNQMKQPVLNQLRQSPRVQLQLQPQTARKHQRLIDDHDGASYYDRIDQQQQYSACVITSCKQKFNQTIYSGARSASFLRCRHGFLLPRHCFRSHILAFLSIHGLLHEPCHLLPLHVGVNFQSNVPLGASRQLVICSAKNGQQIIGTPALMLSSVEFQPECVKNRPVAGCSRTCSCGHQLRKIPLSLVSLTNSSGSMAFSLATRSGLMTHRNGRPQRANPHANSAR

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source
SE Chr02 32375515 32377592 + OsCMeo_02g0034180.01 OsCMeo_02g0034180.01,OsCMeo_02g0034180.03 All
SE Chr02 32375515 32377592 + OsCMeo_02g0034180.02 OsCMeo_02g0034180.02,OsCMeo_02g0034180.03 All
A5 Chr02 32377192 32377592 + OsCMeo_02g0034180.02,OsCMeo_02g0034180.04 OsCMeo_02g0034180.02,OsCMeo_02g0034180.04,OsCMeo_02g0034180.01 All

Expression

Leaf Root Panicle
FPKM 0.000000 12.055593 2.363864

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_02g0755400 RBH 0.0 0.072805 0.000000
Nipponbare | IRGSP 1.0 | MSU LOC_Os02g51890 RBH 0.0 0.037928 0.000000
Nipponbare | IRGSP 1.0 | RAP-db Os02g0755400 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_02g0034210 RBH 0.000000 18.580578 1.484054
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_02g0034290 RBH 0.054689 7.940724 0.389276
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_06g0008140 RBH 0.0 2.976663 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_02g0033760 RBH 0.000000 0.509760 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_02g0030860 SBH 2.886688 9.308311 9.762928
Minghui 63 | MH63RS3 | HZAU OsMH63_02G0519600 RBH 2.159525 11.791919 3.139968
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_02g0033650 RBH 0.000000 2.235304 0.139630
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_02G0549900 RBH 3.068557 22.065066 3.144946
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_02g0033910 RBH 0.104869 0.401378 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_02g0033740 RBH 0.000000 11.697009 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_02g0034040 RBH 0.000000 12.445276 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_02g0033940 RBH 0.156940 1.531204 0.098003
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_02g0033540 RBH 0.000000 8.729742 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_02G034220 RBH 0.000000 5.001235 0.754806
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_02g0033930 RBH 1.374697 36.677555 1.963953
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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