Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsKeNa_01g0026860 | OGI:01080690 | 15/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr01:26533455-26538849 | ||||||||
Gene Symbol | EMP5, Os EMP5, OsEMP5 | ||||||||||
DNA seq | atgcccccgccgtggccgccggccgcgccgccgccggcctgcgcgcgctcgctcgctgacctcctcgtcgcgctctccgccgcccgcgcgctccccaaggggcagcagctccacgggcatctcctcaaggcaggccacctccccgccaccgcctcctcccacgcgcccatcgcccaccacctcctcaccttctacgcccgctgcgcgctccccggcgactccctctgcgccttcctcgacctccccgcgccgccatccccggccgcgtggtcctccctcatatcctccttctcacagaacggcctccccgccgccgcgttcgacgccttccgccgcatgctcgcggccggcgtccccgccaccgaccgcaacattccctccgccgccaaggcggtcgcagccgcggaagactcctcgcgcccgcctcttgccccgcacgcgctccatggactctccgccaagacaccgttcgccggcgacgtgtttgtcgggtcgtcggtgcttgacatgtatgccaagtgcgggcaccttgccgacgcccgccggctattcgatgaaatgccggagcggaatgtcgtctcctggtctgctctcatatgtgggtacgctgatgctgggatgcattccgcggcgatggagatcttccgcttagcacttgaggaggcagtgccggttaatgacttcacagtttcgtgcattcttcgcgtgtgtgctgcagcaacactctttgagcttggtgctcaggtgcacgcccgatctataaagacagctctaaatgcatcaccgtttgtgggtagctcgcttgtttctctttactcaaaatgtggccttgtggagtgtgcataccaggtgtttggtgaagcacctgagagaaaccttggaatttggaatgcggggctcaatgcatctgctcagcatggtcatactactgcagcatttcaacggtttatggatatgcaaaatgctggatttcgtcccaactccatcacgttcctgtctttgatcactgcttgtagccatgctggtcttgttgatgagggaaagagatatttttccctcatgaaagagtacagaattgagccgcaggctgagcattatgctgcaatggttgacctacttggccgtgtaggacgtataagtgaagcactaggccttattgagtcaatgcccatggagccacctgagtatgtctggggtgcactccttatggcatgtcgcatgtttaaggatgctgacgctgcagcaattgctgcaaagaggttgtttgagacagggtcacgaagctctggtgcacatatgctcttgtcaagcacgtatgcagctgcaggaaggcatatggatgcagcacttgcgaggaaagcaatgcgtgatgcaggtgtacgtaaagagactggactaagctggctggaagctgcaggggaggtacatacctttgtgtcaaattgcaggagacatccaagaagcaatgaaatttacaatgtgctggagaaagttggtgagaagatggaggcagctggttatgtagcagatacaagtgcagtggttaaggatgtggacaaggatgagaagcaagcaacaatgaggtatcatagtgaaaggctagcaataggtttggggcttctgattgttccagaaggtgtaccaatacgagttatgaagaacctacgagtttgtgatgattgccacaatgcagttaagtatctcagtaagtgtacaggaaggattgtaattctcagggataaccgtcggtttcaccggtttgaggatggggtatgctcttgtggggatttctggtgatatatcttctgatgtacctcattctcattcatcatgtttttctggtcaggcattttagattatatttcttcaggaaatagatctttacaggttcagtggctggtatgaaacacaaatctattgccatgctgttttggcacagaaaaaaacatgccataaccttcaagctgaaacagctggactcagccatggttctataaataaaacaggacatcggtcatgatatgttaggctcagtttaataatctgaataacagtgtcactgcacgatagttgagactgttctgatgcttcgttgtgcatagaagaatgattgatgtatcaggagaagctacatacaagtttccatacaccagtttgagagtcaccataatacatcagcatggtacagttcagtccgttacactataatcatataaacttttcttttataatgtctgtcattctatagtattatcaattataattgtattatttctttggtactaagtcataacttttcttttataatgtctgtcattctatagtattatcaattataattgtattatttctttggtactaagtcatctactttgagaaagataaacttctatatcttaaatagaacagcaaaactcagtttagatcaaaatgaaaaattattgtggccctgtttggatattagctaaacaatgcaatgtgaactgaaagtagcattagctttatttttcaggcactggtacatctgttgaaatttgttaggccaagacttaaaggtagctgctaaatgtattaaaatattgtactttggaagtgataggtagagatctgagctttatttgtggctttaccttgttgcacgtaggaccttgaccagctaggcagctagacccatattcagaaaggtgcaatggagtggctgctaagctcatattggttttccttgcctaattctggtgatgagtgttgcaaaatactcctttacaaatgtgcctttcctggatgatgttgccaataacagtgaaaaatggtggttacatacatcataactctgtagatggctcttcacaaacagaacttttggctgtatggtcatggtctatattattctattaaggatatagtcaagattacgattatacatatggttagtaatcattggaactaaaggttttaatatgaaatgctttggttagtaaacatggtactaatggatgcttctattggagaatacttcaaataccaaacagtacgcgtataaacttctgccatttattggagaaaaatcttctacagaagatgctgctcatttctggttgcaactggtgaaccccaccccctctcttcagaggcacacaaagatttggtgtgctgggtagtgtcaggtggcatttctttatgaatatgatggagttctccacttctcctttaggccttatttgatccgtgcaagtttcttcatgctttgaaatccaggatggatggttgccaagttgggcggttgattggtagggaagagaatgacagggagctcatcttctacatgcttatggaactgcagatttgatggagaggatagcaacctagaatcatacacacacacacacacacatatatacccagacgcccagtggaatatgaagttgcaagcttttgtggcttgtaagtaccaagcatcacagaccaaccatatacggcaaagatgagctccctaagagggcttggaaatatcgccagaagatggagagagctcaatggtgtgagttactggaaggggttacttgatcctcttgacgttgatctccgcaataacatcatcaactatggtgagctttctcaggcagcctacacggggttaaacagagagagaagatcaaggtacgctgggtcttgcctcttcagtcgcaaggacttcctcagcagggtggatgtatcaaacccaaatctgtatgtcattacaaagttcatatatgcaatgtgtactgtcagtttgcctgatgcattcatgataaagtcatggtcgaaggctgcatggagcaagcagtcaaattggatggggtttgttgcggtggccacagatgaaggtaaagaagtgcttgggagacgggatgtggtggtggcatggcgtggaacaatacggatggtagaatggatggatgaccttgatatttccttggtacctgcttcagaaatagtacggccaggcagtgctgatgacccttgtgtgcatggggggtggctgtctgtgtacacgagtgccgatccagaatctcagtacaataagcagagtgcaagatatcaggtaattcatgtcattcttgatttaaccattagtatatcaacgaaaaagccaatattgattgtcttatcttctgaagcaaacgttgtcaatttttgtccaagttataccttagtatatttaagtatctaaagtagagtatagtagatcgatagttacgcttgaaggataggagttgtttcatttgaagtgaaggaaagaaaaggatgtataccagatagcttatgctatggatcagggtattgcttatttgcttatacttcactgaaataacatagtacacgtgcaaatgttgtagaatcgctgtgcttgttatttatatgccctgctgttgcacatagttgtatggtaaatgttggtgcaacataaaactaatgaaaagcaataaaactgatttaagaagcaacacttgatataatctttcctgtttccctattatccattgtagagaaccaacgtaaggactccttttttcaccaatcggccatcatgtatctctgttccaccttactgcactaatgaagcatcatgatggtttcaagtgggagattattccgttatgattctcccaaagcttaatccacataaagacaatcatcgcacaacactagtgcattgcaagggaaggaagcttggattactgggtctatgatattaatgattactagatgttaaatagcattgtctgtgcatggaaaggaattttgatcgatcaaactaacatatttgtatcaggtcttgaatgagatcaaacggctccaggatatgtacgagcatgaggagactagcatcaccataacaggccacagccttggggctgcacttgccaccatcaatgccactgacattgtctccaatggttacaacaagagctgtccagtgtctgccttcgtcttcggtagcccaagagtgggcaaccctgattttcagaaagcgttcgacagtgctccagatttgagattgctccgcattcgaaactctcctgatgtggttccaaactggccaaaactaggatacagcgatgctggcacagagctgatgatcgatacagggaagtcaccatacctgaaggcccctgggaatcccctaacgtggcatgacatggagtgctacatgcatggggttgccgggacgcaggggagcaacggagggttcaagctggagattgatcgagacattgctttggttaacaaacacgaagacgcactgaagaatgagtatgcaattccatcgtcttggtgggtggtgcagaacaaaggtatggtgaaaggcacggatggtcggtggcatttggccgaccatgaggatgatgactga
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CDS seq | atgcccccgccgtggccgccggccgcgccgccgccggcctgcgcgcgctcgctcgctgacctcctcgtcgcgctctccgccgcccgcgcgctccccaaggggcagcagctccacgggcatctcctcaaggcaggccacctccccgccaccgcctcctcccacgcgcccatcgcccaccacctcctcaccttctacgcccgctgcgcgctccccggcgactccctctgcgccttcctcgacctccccgcgccgccatccccggccgcgtggtcctccctcatatcctccttctcacagaacggcctccccgccgccgcgttcgacgccttccgccgcatgctcgcggccggcgtccccgccaccgaccgcaacattccctccgccgccaaggcggtcgcagccgcggaagactcctcgcgcccgcctcttgccccgcacgcgctccatggactctccgccaagacaccgttcgccggcgacgtgtttgtcgggtcgtcggtgcttgacatgtatgccaagtgcgggcaccttgccgacgcccgccggctattcgatgaaatgccggagcggaatgtcgtctcctggtctgctctcatatgtgggtacgctgatgctgggatgcattccgcggcgatggagatcttccgcttagcacttgaggaggcagtgccggttaatgacttcacagtttcgtgcattcttcgcgtgtgtgctgcagcaacactctttgagcttggtgctcaggtgcacgcccgatctataaagacagctctaaatgcatcaccgtttgtgggtagctcgcttgtttctctttactcaaaatgtggccttgtggagtgtgcataccaggtgtttggtgaagcacctgagagaaaccttggaatttggaatgcggggctcaatgcatctgctcagcatggtcatactactgcagcatttcaacggtttatggatatgcaaaatgctggatttcgtcccaactccatcacgttcctgtctttgatcactgcttgtagccatgctggtcttgttgatgagggaaagagatatttttccctcatgaaagagtacagaattgagccgcaggctgagcattatgctgcaatggttgacctacttggccgtgtaggacgtataagtgaagcactaggccttattgagtcaatgcccatggagccacctgagtatgtctggggtgcactccttatggcatgtcgcatgtttaaggatgctgacgctgcagcaattgctgcaaagaggttgtttgagacagggtcacgaagctctggtgcacatatgctcttgtcaagcacgtatgcagctgcaggaaggcatatggatgcagcacttgcgaggaaagcaatgcgtgatgcaggtgtacgtaaagagactggactaagctggctggaagctgcaggggaggtacatacctttgtgtcaaattgcaggagacatccaagaagcaatgaaatttacaatgtgctggagaaagttggtgagaagatggaggcagctggttatgtagcagatacaagtgcagtggttaaggatgtggacaaggatgagaagcaagcaacaatgaggtatcatagtgaaaggctagcaataggtttggggcttctgattgttccagaaggtgtaccaatacgagttatgaagaacctacgagtttgtgatgattgccacaatgcagttaagtatctcaaccaaccatatacggcaaagatgagctccctaagagggcttggaaatatcgccagaagatggagagagctcaatggtgtgagttactggaaggggttacttgatcctcttgacgttgatctccgcaataacatcatcaactatggtgagctttctcaggcagcctacacggggttaaacagagagagaagatcaagtttgcctgatgcattcatgataaagtcatggtcgaaggctgcatggagcaagcagtcaaattggatggggtttgttgcggtggccacagatgaagaaatagtacggccaggcagtgctgatgacccttgtgtgcatggggggtggctgtctgtgtacacgagtgccgatccagaatctcagtacaataagcagagtgcaagatatcaggtcttgaatgagatcaaacggctccaggatatgtacgagcatgaggagactagcatcaccataacaggccacagccttggggctgcacttgccaccatcaatgccactgacattgtctccaatggttacaacaagagctgtccagtgtctgccttcgtcttcggtagcccaagagtgggcaaccctgattttcagaaagcgttcgacagtgctccagatttgagattgctccgcattcgaaactctcctgatgtggttccaaactggccaaaactaggatacagcgatgctggcacagagctgatgatcgatacagggaagtcaccatacctgaaggcccctgggaatcccctaacgtggcatgacatggagtgctacatgcatggggttgccgggacgcaggggagcaacggagggttcaagctggagattgatcgagacattgctttggttaacaaacacgaagacgcactgaagaatgagtatgcaattccatcgtcttggtgggtggtgcagaacaaaggtatggtgaaaggcacggatggtcggtggcatttggccgaccatgaggatgatgactga
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Protein seq | MPPPWPPAAPPPACARSLADLLVALSAARALPKGQQLHGHLLKAGHLPATASSHAPIAHHLLTFYARCALPGDSLCAFLDLPAPPSPAAWSSLISSFSQNGLPAAAFDAFRRMLAAGVPATDRNIPSAAKAVAAAEDSSRPPLAPHALHGLSAKTPFAGDVFVGSSVLDMYAKCGHLADARRLFDEMPERNVVSWSALICGYADAGMHSAAMEIFRLALEEAVPVNDFTVSCILRVCAAATLFELGAQVHARSIKTALNASPFVGSSLVSLYSKCGLVECAYQVFGEAPERNLGIWNAGLNASAQHGHTTAAFQRFMDMQNAGFRPNSITFLSLITACSHAGLVDEGKRYFSLMKEYRIEPQAEHYAAMVDLLGRVGRISEALGLIESMPMEPPEYVWGALLMACRMFKDADAAAIAAKRLFETGSRSSGAHMLLSSTYAAAGRHMDAALARKAMRDAGVRKETGLSWLEAAGEVHTFVSNCRRHPRSNEIYNVLEKVGEKMEAAGYVADTSAVVKDVDKDEKQATMRYHSERLAIGLGLLIVPEGVPIRVMKNLRVCDDCHNAVKYLNQPYTAKMSSLRGLGNIARRWRELNGVSYWKGLLDPLDVDLRNNIINYGELSQAAYTGLNRERRSSLPDAFMIKSWSKAAWSKQSNWMGFVAVATDEEIVRPGSADDPCVHGGWLSVYTSADPESQYNKQSARYQVLNEIKRLQDMYEHEETSITITGHSLGAALATINATDIVSNGYNKSCPVSAFVFGSPRVGNPDFQKAFDSAPDLRLLRIRNSPDVVPNWPKLGYSDAGTELMIDTGKSPYLKAPGNPLTWHDMECYMHGVAGTQGSNGGFKLEIDRDIALVNKHEDALKNEYAIPSSWWVVQNKGMVKGTDGRWHLADHEDDD |
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Function | Phospholipase A1-II 1 [UniProtKB/Swiss-Prot:A2ZW16] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsKeNa_01g0026860 | OsKeNa_01g0026860.01 | Chr01 | 26533455 | 26538849 | + | NAM | ||
CDS seq | atgcccccgccgtggccgccggccgcgccgccgccggcctgcgcgcgctcgctcgctgacctcctcgtcgcgctctccgccgcccgcgcgctccccaaggggcagcagctccacgggcatctcctcaaggcaggccacctccccgccaccgcctcctcccacgcgcccatcgcccaccacctcctcaccttctacgcccgctgcgcgctccccggcgactccctctgcgccttcctcgacctccccgcgccgccatccccggccgcgtggtcctccctcatatcctccttctcacagaacggcctccccgccgccgcgttcgacgccttccgccgcatgctcgcggccggcgtccccgccaccgaccgcaacattccctccgccgccaaggcggtcgcagccgcggaagactcctcgcgcccgcctcttgccccgcacgcgctccatggactctccgccaagacaccgttcgccggcgacgtgtttgtcgggtcgtcggtgcttgacatgtatgccaagtgcgggcaccttgccgacgcccgccggctattcgatgaaatgccggagcggaatgtcgtctcctggtctgctctcatatgtgggtacgctgatgctgggatgcattccgcggcgatggagatcttccgcttagcacttgaggaggcagtgccggttaatgacttcacagtttcgtgcattcttcgcgtgtgtgctgcagcaacactctttgagcttggtgctcaggtgcacgcccgatctataaagacagctctaaatgcatcaccgtttgtgggtagctcgcttgtttctctttactcaaaatgtggccttgtggagtgtgcataccaggtgtttggtgaagcacctgagagaaaccttggaatttggaatgcggggctcaatgcatctgctcagcatggtcatactactgcagcatttcaacggtttatggatatgcaaaatgctggatttcgtcccaactccatcacgttcctgtctttgatcactgcttgtagccatgctggtcttgttgatgagggaaagagatatttttccctcatgaaagagtacagaattgagccgcaggctgagcattatgctgcaatggttgacctacttggccgtgtaggacgtataagtgaagcactaggccttattgagtcaatgcccatggagccacctgagtatgtctggggtgcactccttatggcatgtcgcatgtttaaggatgctgacgctgcagcaattgctgcaaagaggttgtttgagacagggtcacgaagctctggtgcacatatgctcttgtcaagcacgtatgcagctgcaggaaggcatatggatgcagcacttgcgaggaaagcaatgcgtgatgcaggtgtacgtaaagagactggactaagctggctggaagctgcaggggaggtacatacctttgtgtcaaattgcaggagacatccaagaagcaatgaaatttacaatgtgctggagaaagttggtgagaagatggaggcagctggttatgtagcagatacaagtgcagtggttaaggatgtggacaaggatgagaagcaagcaacaatgaggtatcatagtgaaaggctagcaataggtttggggcttctgattgttccagaaggtgtaccaatacgagttatgaagaacctacgagtttgtgatgattgccacaatgcagttaagtatctcaaccaaccatatacggcaaagatgagctccctaagagggcttggaaatatcgccagaagatggagagagctcaatggtgtgagttactggaaggggttacttgatcctcttgacgttgatctccgcaataacatcatcaactatggtgagctttctcaggcagcctacacggggttaaacagagagagaagatcaagtttgcctgatgcattcatgataaagtcatggtcgaaggctgcatggagcaagcagtcaaattggatggggtttgttgcggtggccacagatgaagaaatagtacggccaggcagtgctgatgacccttgtgtgcatggggggtggctgtctgtgtacacgagtgccgatccagaatctcagtacaataagcagagtgcaagatatcaggtcttgaatgagatcaaacggctccaggatatgtacgagcatgaggagactagcatcaccataacaggccacagccttggggctgcacttgccaccatcaatgccactgacattgtctccaatggttacaacaagagctgtccagtgtctgccttcgtcttcggtagcccaagagtgggcaaccctgattttcagaaagcgttcgacagtgctccagatttgagattgctccgcattcgaaactctcctgatgtggttccaaactggccaaaactaggatacagcgatgctggcacagagctgatgatcgatacagggaagtcaccatacctgaaggcccctgggaatcccctaacgtggcatgacatggagtgctacatgcatggggttgccgggacgcaggggagcaacggagggttcaagctggagattgatcgagacattgctttggttaacaaacacgaagacgcactgaagaatgagtatgcaattccatcgtcttggtgggtggtgcagaacaaaggtatggtgaaaggcacggatggtcggtggcatttggccgaccatgaggatgatgactga
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Protein seq | MPPPWPPAAPPPACARSLADLLVALSAARALPKGQQLHGHLLKAGHLPATASSHAPIAHHLLTFYARCALPGDSLCAFLDLPAPPSPAAWSSLISSFSQNGLPAAAFDAFRRMLAAGVPATDRNIPSAAKAVAAAEDSSRPPLAPHALHGLSAKTPFAGDVFVGSSVLDMYAKCGHLADARRLFDEMPERNVVSWSALICGYADAGMHSAAMEIFRLALEEAVPVNDFTVSCILRVCAAATLFELGAQVHARSIKTALNASPFVGSSLVSLYSKCGLVECAYQVFGEAPERNLGIWNAGLNASAQHGHTTAAFQRFMDMQNAGFRPNSITFLSLITACSHAGLVDEGKRYFSLMKEYRIEPQAEHYAAMVDLLGRVGRISEALGLIESMPMEPPEYVWGALLMACRMFKDADAAAIAAKRLFETGSRSSGAHMLLSSTYAAAGRHMDAALARKAMRDAGVRKETGLSWLEAAGEVHTFVSNCRRHPRSNEIYNVLEKVGEKMEAAGYVADTSAVVKDVDKDEKQATMRYHSERLAIGLGLLIVPEGVPIRVMKNLRVCDDCHNAVKYLNQPYTAKMSSLRGLGNIARRWRELNGVSYWKGLLDPLDVDLRNNIINYGELSQAAYTGLNRERRSSLPDAFMIKSWSKAAWSKQSNWMGFVAVATDEEIVRPGSADDPCVHGGWLSVYTSADPESQYNKQSARYQVLNEIKRLQDMYEHEETSITITGHSLGAALATINATDIVSNGYNKSCPVSAFVFGSPRVGNPDFQKAFDSAPDLRLLRIRNSPDVVPNWPKLGYSDAGTELMIDTGKSPYLKAPGNPLTWHDMECYMHGVAGTQGSNGGFKLEIDRDIALVNKHEDALKNEYAIPSSWWVVQNKGMVKGTDGRWHLADHEDDD
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.040613 | 0.797937 | 0.350572 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0651100 | RBH | 0.614479 | 0.350961 | 0.167288 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g46230 | RBH | 0.183754 | 0.468554 | 0.0 |
Nipponbare | IRGSP 1.0 | RAP-db | Os01g0651100 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0027380 | RBH | 0.000000 | 6.596134 | 0.476200 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0027610 | SBH | 0.0 | 0.000000 | 5.496304 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0027320 | RBH | 0.474632 | 1.880189 | 3.148656 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0026560 | RBH | 0.0 | 0.000000 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0026310 | RBH | 0.000000 | 3.399516 | 1.847886 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0440900 | RBH | 0.82189 | 1.9485115 | 1.6519695 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0025990 | RBH | 0.015815 | 0.000000 | 0.666478 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0429800 | RBH | 0.870153 | 1.652639 | 6.2527545 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0026240 | RBH | 0.0 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0026160 | RBH | 0.0 | 0.000000 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0026490 | RBH | 0.741486 | 0.0 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0026540 | RBH | 0.076276 | 0.000000 | 0.247737 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0026370 | RBH | 0.0 | 1.292145 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G026750 | RBH | 0.033222 | 0.472943 | 0.104179 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0026520 | RBH | 0.339813 | 2.582010 | 2.754528 |