Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsKeNa_01g0019870 OGI:01061870 | 16/16 KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) Chr01:19475688-19482149
Gene Symbol BGAL5, OsBgal5, OsBGal5, RMP1
DNA seq

caagggcattaacacacatgtttaaccactcgatcgtaaaagtacttcatagatgaaatatttggtcccagtatatatcacactctgcgtctctgcaatcaacagttgatcagagaaccctaattaataaactcactttttacccccgaattaacacatgcaccaggggcgactaccagcttaactcaataaacaaaccatcctaattaagcgactaattaaagacctaattaatcaaagacatggccactccatatatatgcatgtagatcaatcagcaagtggcctggacggtgagcacgccggacaggcacccggcgccggcgaacgcgccggtgatctccaccgtgcacgactccttcccgacgcacgccgccgtgaacgcctcgtacgccgccttggactcgcacccgccctcgtagccgccgcaccgcccgcgccccacgccgaagctggccacgtcgacgctcgacacggcgtggccgccgccgcacgacagcgtgacggcgtcaccggcctcgccggaggtgcacacggcaccgggcaccacggtgcggagggcgacgcccgaggggtcgccgccggcctcctcgaagaggagcagcgtgttgggctcgccggcggcgaggaaggagcgcggcacgtggtagtagcgctgcgacggctcgccgcagcccgtgaggcacctggtgccgtcgccctccgcctggaacgcgccgcggtagtcgcagcggtggcagccggccatctccgccgccgtgtacgacggccagtagcggccgaggttgttgccgttcacccacgccacgcccttgttcaagcccagcaggtccaccaccaccgcgtcctcgccggacggagcttcaaatgtagccttcataacaaaaaaaaaagtaaccaaagtattaagattgttttggcggtgaaagaattaatgacatgatgaaatttcatagggaaggtaaattaagtaaattgtagtcttcataagaaaacaaaaaaagtattaaaaatccttttatttttgcaggtgaaagaatgaaacgatgaaatgaaatcatacaggtaattaaattactccagtttcataattgataagttttaggttaaacttttataaattaactaataatgactttaaaaatatctagtttaaaggcaccaaaacaacatatataaatttgacttacaaagtactataacaaaagtaatatatatatatttatattaatatattgtaatagagaaatatagtcagaaatatattttgaaaattatgtcattgttcagaatgttaagaattataaaaccggagagagtgagtaaataatggacatatactgtaccttgtaccaagtaaaaggcctgttgatggggatggtgccattgttgccattccatttgtagcctggcttgtcaagatggatctgcctgtactcactagccaagccagcctacaacacaaaaaaacatcaaagcaagaaacactatatgatcaataccagcaaagttaacaaacaactaagcattgatgaaaaataatgtgtaaccttataagaccaggagctgttggagagatcaattgcggtgccattgctgtctatcagcttaacagggcctccaacaatgcccgtgggcatcttttcgaacgaagggccatagttctgtttaccaagaatgatcaaacaatttatcactggtatacatgattaattgcaaataaagaagatgagttcgttgctgatacgatggaagtgagcattcaagaaagaaaattaggaaccttgaggccaacggttgcactcagaagagagatgtagttcttgccatcatggagcttcaccggcgactctagttggaagacaaaatctccatcggcagaatggtttttccctgacaaattatgaacacacatgtttgtcaatgaacattctttaattttgacccgcaggttcacaaacattctttaatttcgacccacacagaattaaaagaatggtgcaacgaaaatatggaaaaaaaataactttgatactcaccaataagcttcccgttcacaaaggcataaagttcatggccagtcgtgttcacgtacaatttgtagctcccttctcctttgtgattaagactgcaattttttttttgttggtgacgttctaaatttgtaacatatatatatttttttgtcggaatcatttcaaatttacatcatcatgatctcttttctttagtataaagagattttttttttaaaaaaataccttgttctgtaccacaggtaatcactttgatcggttgacgtgacgatctgctccaagagctcattcttcctaaagttgcccttctcatcggtcatgaaaggactcaagttttcaggcatccaagaccattttaggctctcctgctcctgctccgccgtgttgggtttcttcaccatgacagacgtctgggtcttaatctaggtcataccaagaggaaaacaaaattaagagatgaattatagaccttacacttggtctcattttaatttcattattgattattgagaaaggaaaaataccttggcgctattgaaggcaacagtcttgcagtcaggcaagatgctgactgaccatgcaggcaggaggtgagtggctccatcgagggtcacattgacatctttatcatcaaatctgttgttgatgaagcaagcagatgaggagtccagagtgtacttggtaacctacattgatcagagatagtaccaatatgcatgcattagatatgtttgcattagacgtgataattttgattaaaagaagggcgtgatctgaatattactgtgatgttatcgccatagttggtgtcaaaatactctccatggacaagagttttctccatggacttgagcacggagtggagttccttcaagtgaccatatttgggttgcctgagattacctgtaataaatcaaaagtagaccaacaagattataattaaaataagacaaaaaattgctttcttattcaaattcaccatataattaacagtacggtaaaatatattaatcaaagcttaccatactcatccaaaggcgcgtcataatcatagcttgttgtgatgtacggacctccggaggtacgaccaaagttggttccaccatggtactaacaaaaaatggaaaaaaaaaactcagcataaatcaacgaaaattcagtcattgtgaaagagatacaagctagccagcataccatatagtaattttgcagagatccacgcttttggaagaacatcgcaaccgcaaaagcaatgtcttcagctgacctatggaaatccggcttgtcccaagctttgaacctaacgttaagtacatcaacaaattaagataaatctcctccatgttcatcaaaaaataattttgcaaacaaagagatatatgtactaaaagttaattttgtaaacaatgagagaaatactaatggaagaaaaaaaaataccagccagtccagttctctgtccaaatcttagggatgcctgtcctatttggaaaccagtcatggcaatagaatccattacaggtattgacctagagcggtccaaaacaatgacaaactcatgttattagatgagtgataaacaaataaattcatataatattctatattcttgtgggattaaaacccatgctcaccacattgtgcggcacatcgtcgtcttgttgacacatgatccatgggacaccgacgttctgcttgttcgccatgtcagcacaccagtggatgtattcagatgcagactggttgttgtttaatttccccatgatgtttccatactcattctcaatctgtgcattgatccattaatgcattgatattaattgacaatatatattgtggaatgacaatagtacaaattattaacatgctaatttcccattgttcaatcatattgaagaatgatcattacaatacctgagcaaggatgatcggtcctccttgttcagcaaacatttttgaatccttcatcttgttaactataagagtggtgaatgtctccatctcattctatatcatggaaaaaaacacttgcattaattatatgctagtatatgtaaaagtacacaaaaatagatgagaattttattattattattattatttaacctcaaaaggctcattatgcagcctaaactgcattccagggatgtcgcgtagccaagctggaagtcctctgcacatttggcatttgttttagaaaacaacaaaacacagtgagcacttcaacatgcatgcatggacacataataatgttatagaaagaaactagagtagtttagtgtgctcgcttgtttcctcttattctatatgaacactatagatataatatttgattaatttgcagatcgatataatagtctattctatttcgtttttttctctaattctatatgaacattatagatataatattcgattaatttgcagatcaatataatattctattctatttatcactttgacacacaaatgctttagcatttatatacatgatacatacccatagttccattcgccacagatgtacgggccaatgcgaagaatggcgtacatgccggcattctggatctccttgaagaacctgacgacatcgtagttaccctcaaaattgtactgccgatcaaagcaaaaacattgttatagtattactagtatttatccatggttgttattgtatgtaatagctgcagtacgtagtagtgtttatgtgctaaagcaaaagtagtaatattgaacctggcggcggtgcggctcatggccgttccaaaagatgtaagtctcgatggcatcgagaccaccttccttcgccttcttgatcagatccggccacatctgcatagcaacaataagattagattagatagaaaaaaaatcaaattaatcttttgcgcacgtacatatattgcttatgttcattaatttcttaacacaaattaagaaaataaagatcgaacgaatataagtcacaacataatatgcatgcataagtatataaaagtatagaacataaaactcctcgcactgcttagctcatcacgatctatggcacaaaaagaaaagaaacactcaagcaagcaactctgtatcctactagtacaaaacactcaaagttgtatatgcatttaatttgcagattaatattatcaactatctctattttttaatacatgatgttgttgattttttcacacatttaaccattcttcttattaaaaaaacataattataatttattttttgtgagttgttttatcactcaaagtattttaagcatgatttatatcttatgtatctccataaattattacaaatgttcaaacatattaaaaaattaacgacatcatgtattgaaaaacaaaaatagtatacactaggaatatctatacctatacagcgttaacctggtgaatctgccgttgatcaaatagacccacacattattaatttatagttaatatcatggtcccatgggcctcacaaatcccatccaataatctctacatacaattttgttgggaattcagttggatatattgccgatgatctggatttcaagcggaggcatcaacacaaatggaaatagagatgaactttaggacgcgctcagatatctccaagtcgatcgggtattattgtttctcaatctagattggtttctcatctcaaacaattttaacctgggtaaactatatatatgacacggttgaaaaatgagcacctggaagagtacatagtaacgtgctaattactttgctgacagagtttagtctatgattatgttgactacacggacagaattttggacaatgattatgttgctaccaacatatgattaattccgtggctactttttttatttctttttacatgtacagattggatctaatgccaaaatttatttaattaattagttttccacttaacacattactacgcatagttacaatttcaatataattctcaacggtgataacaatatcaatattgtacaccattcataatacatggatcttacaattttaaaaatatacaacgaattctatgattaaaatataattcactcagaaaataaattaaaaatcaccatattgcagttggcattaatttgccatcaatttaaaccattcctatacgattttgtatgactgaaatactatcagagtaaaattttatagggctaaaaaataatatttaaaattatctcgtgcgttgcacgggttgacggctagtataacaagtcggttacctcgggagtgctccggggataatggatggaaccagagaggatgatccggcgctggccgtcgatgacgaggctgcggtcgtcgtagctgacgctggtgcagcccacggcatcggccgccacggcgaggaccagcagcgccacccaccaccggcaccagctgctgccgcgccgtcccatcat

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CDS seq

atgatgggacggcgcggcagcagctggtgccggtggtgggtggcgctgctggtcctcgccgtggcggccgatgccgtgggctgcaccagcgtcagctacgacgaccgcagcctcgtcatcgacggccagcgccggatcatcctctctggttccatccattatccccggagcactcccgagatgtggccggatctgatcaagaaggcgaaggaaggtggtctcgatgccatcgagacttacatcttttggaacggccatgagccgcaccgccgccagtacaattttgagggtaactacgatgtcgtcaggttcttcaaggagatccagaatgccggcatgtacgccattcttcgcattggcccgtacatctgtggcgaatggaactatggaggacttccagcttggctacgcgacatccctggaatgcagtttaggctgcataatgagccttttgagaatgagatggagacattcaccactcttatagttaacaagatgaaggattcaaaaatgtttgctgaacaaggaggaccgatcatccttgctcagattgagaatgagtatggaaacatcatggggaaattaaacaacaaccagtctgcatctgaatacatccactggtgtgctgacatggcgaacaagcagaacgtcggtgtcccatggatcatgtgtcaacaagacgacgatgtgccgcacaatgtggtcaatacctgtaatggattctattgccatgactggtttccaaataggacaggcatccctaagatttggacagagaactggactggctggttcaaagcttgggacaagccggatttccataggtcagctgaagacattgcttttgcggttgcgatgttcttccaaaagcgtggatctctgcaaaattactatatgtaccatggtggaaccaactttggtcgtacctccggaggtccgtacatcacaacaagctatgattatgacgcgcctttggatgagtatggtaatctcaggcaacccaaatatggtcacttgaaggaactccactccgtgctcaagtccatggagaaaactcttgtccatggagagtattttgacaccaactatggcgataacatcacagttaccaagtacactctggactcctcatctgcttgcttcatcaacaacagatttgatgataaagatgtcaatgtgaccctcgatggagccactcacctcctgcctgcatggtcagtcagcatcttgcctgactgcaagactgttgccttcaatagcgccaagattaagacccagacgtctgtcatggtgaagaaacccaacacggcggagcaggagcaggagagcctaaaatggtcttggatgcctgaaaacttgagtcctttcatgaccgatgagaagggcaactttaggaagaatgagctcttggagcagatcgtcacgtcaaccgatcaaagtgattacctgtggtacagaacaagtcttaatcacaaaggagaagggagctacaaattgtacgtgaacacgactggccatgaactttatgcctttgtgaacgggaagcttattgggaaaaaccattctgccgatggagattttgtcttccaactagagtcgccggtgaagctccatgatggcaagaactacatctctcttctgagtgcaaccgttggcctcaagaactatggcccttcgttcgaaaagatgcccacgggcattgttggaggccctgttaagctgatagacagcaatggcaccgcaattgatctctccaacagctcctggtcttataaggctacatttgaagctccgtccggcgaggacgcggtggtggtggacctgctgggcttgaacaagggcgtggcgtgggtgaacggcaacaacctcggccgctactggccgtcgtacacggcggcggagatggccggctgccaccgctgcgactaccgcggcgcgttccaggcggagggcgacggcaccaggtgcctcacgggctgcggcgagccgtcgcagcgctactaccacgtgccgcgctccttcctcgccgccggcgagcccaacacgctgctcctcttcgaggaggccggcggcgacccctcgggcgtcgccctccgcaccgtggtgcccggtgccgtgtgcacctccggcgaggccggtgacgccgtcacgctgtcgtgcggcggcggccacgccgtgtcgagcgtcgacgtggccagcttcggcgtggggcgcgggcggtgcggcggctacgagggcgggtgcgagtccaaggcggcgtacgaggcgttcacggcggcgtgcgtcgggaaggagtcgtgcacggtggagatcaccggcgcgttcgccggcgccgggtgcctgtccggcgtgctcaccgtccaggccacttgctga

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Protein seq

MMGRRGSSWCRWWVALLVLAVAADAVGCTSVSYDDRSLVIDGQRRIILSGSIHYPRSTPEMWPDLIKKAKEGGLDAIETYIFWNGHEPHRRQYNFEGNYDVVRFFKEIQNAGMYAILRIGPYICGEWNYGGLPAWLRDIPGMQFRLHNEPFENEMETFTTLIVNKMKDSKMFAEQGGPIILAQIENEYGNIMGKLNNNQSASEYIHWCADMANKQNVGVPWIMCQQDDDVPHNVVNTCNGFYCHDWFPNRTGIPKIWTENWTGWFKAWDKPDFHRSAEDIAFAVAMFFQKRGSLQNYYMYHGGTNFGRTSGGPYITTSYDYDAPLDEYGNLRQPKYGHLKELHSVLKSMEKTLVHGEYFDTNYGDNITVTKYTLDSSSACFINNRFDDKDVNVTLDGATHLLPAWSVSILPDCKTVAFNSAKIKTQTSVMVKKPNTAEQEQESLKWSWMPENLSPFMTDEKGNFRKNELLEQIVTSTDQSDYLWYRTSLNHKGEGSYKLYVNTTGHELYAFVNGKLIGKNHSADGDFVFQLESPVKLHDGKNYISLLSATVGLKNYGPSFEKMPTGIVGGPVKLIDSNGTAIDLSNSSWSYKATFEAPSGEDAVVVDLLGLNKGVAWVNGNNLGRYWPSYTAAEMAGCHRCDYRGAFQAEGDGTRCLTGCGEPSQRYYHVPRSFLAAGEPNTLLLFEEAGGDPSGVALRTVVPGAVCTSGEAGDAVTLSCGGGHAVSSVDVASFGVGRGRCGGYEGGCESKAAYEAFTAACVGKESCTVEITGAFAGAGCLSGVLTVQATC

Function Beta-galactosidase 1 [UniProtKB/Swiss-Prot:Q8RUV9]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsKeNa_01g0019870 OsKeNa_01g0019870.01 Chr01 19475688 19482149 - NAM
CDS seq

atgatgggacggcgcggcagcagctggtgccggtggtgggtggcgctgctggtcctcgccgtggcggccgatgccgtgggctgcaccagcgtcagctacgacgaccgcagcctcgtcatcgacggccagcgccggatcatcctctctggttccatccattatccccggagcactcccgagatgtggccggatctgatcaagaaggcgaaggaaggtggtctcgatgccatcgagacttacatcttttggaacggccatgagccgcaccgccgccagtacaattttgagggtaactacgatgtcgtcaggttcttcaaggagatccagaatgccggcatgtacgccattcttcgcattggcccgtacatctgtggcgaatggaactatggaggacttccagcttggctacgcgacatccctggaatgcagtttaggctgcataatgagccttttgagaatgagatggagacattcaccactcttatagttaacaagatgaaggattcaaaaatgtttgctgaacaaggaggaccgatcatccttgctcagattgagaatgagtatggaaacatcatggggaaattaaacaacaaccagtctgcatctgaatacatccactggtgtgctgacatggcgaacaagcagaacgtcggtgtcccatggatcatgtgtcaacaagacgacgatgtgccgcacaatgtggtcaatacctgtaatggattctattgccatgactggtttccaaataggacaggcatccctaagatttggacagagaactggactggctggttcaaagcttgggacaagccggatttccataggtcagctgaagacattgcttttgcggttgcgatgttcttccaaaagcgtggatctctgcaaaattactatatgtaccatggtggaaccaactttggtcgtacctccggaggtccgtacatcacaacaagctatgattatgacgcgcctttggatgagtatggtaatctcaggcaacccaaatatggtcacttgaaggaactccactccgtgctcaagtccatggagaaaactcttgtccatggagagtattttgacaccaactatggcgataacatcacagttaccaagtacactctggactcctcatctgcttgcttcatcaacaacagatttgatgataaagatgtcaatgtgaccctcgatggagccactcacctcctgcctgcatggtcagtcagcatcttgcctgactgcaagactgttgccttcaatagcgccaagattaagacccagacgtctgtcatggtgaagaaacccaacacggcggagcaggagcaggagagcctaaaatggtcttggatgcctgaaaacttgagtcctttcatgaccgatgagaagggcaactttaggaagaatgagctcttggagcagatcgtcacgtcaaccgatcaaagtgattacctgtggtacagaacaagtcttaatcacaaaggagaagggagctacaaattgtacgtgaacacgactggccatgaactttatgcctttgtgaacgggaagcttattgggaaaaaccattctgccgatggagattttgtcttccaactagagtcgccggtgaagctccatgatggcaagaactacatctctcttctgagtgcaaccgttggcctcaagaactatggcccttcgttcgaaaagatgcccacgggcattgttggaggccctgttaagctgatagacagcaatggcaccgcaattgatctctccaacagctcctggtcttataaggctacatttgaagctccgtccggcgaggacgcggtggtggtggacctgctgggcttgaacaagggcgtggcgtgggtgaacggcaacaacctcggccgctactggccgtcgtacacggcggcggagatggccggctgccaccgctgcgactaccgcggcgcgttccaggcggagggcgacggcaccaggtgcctcacgggctgcggcgagccgtcgcagcgctactaccacgtgccgcgctccttcctcgccgccggcgagcccaacacgctgctcctcttcgaggaggccggcggcgacccctcgggcgtcgccctccgcaccgtggtgcccggtgccgtgtgcacctccggcgaggccggtgacgccgtcacgctgtcgtgcggcggcggccacgccgtgtcgagcgtcgacgtggccagcttcggcgtggggcgcgggcggtgcggcggctacgagggcgggtgcgagtccaaggcggcgtacgaggcgttcacggcggcgtgcgtcgggaaggagtcgtgcacggtggagatcaccggcgcgttcgccggcgccgggtgcctgtccggcgtgctcaccgtccaggccacttgctga

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Protein seq

MMGRRGSSWCRWWVALLVLAVAADAVGCTSVSYDDRSLVIDGQRRIILSGSIHYPRSTPEMWPDLIKKAKEGGLDAIETYIFWNGHEPHRRQYNFEGNYDVVRFFKEIQNAGMYAILRIGPYICGEWNYGGLPAWLRDIPGMQFRLHNEPFENEMETFTTLIVNKMKDSKMFAEQGGPIILAQIENEYGNIMGKLNNNQSASEYIHWCADMANKQNVGVPWIMCQQDDDVPHNVVNTCNGFYCHDWFPNRTGIPKIWTENWTGWFKAWDKPDFHRSAEDIAFAVAMFFQKRGSLQNYYMYHGGTNFGRTSGGPYITTSYDYDAPLDEYGNLRQPKYGHLKELHSVLKSMEKTLVHGEYFDTNYGDNITVTKYTLDSSSACFINNRFDDKDVNVTLDGATHLLPAWSVSILPDCKTVAFNSAKIKTQTSVMVKKPNTAEQEQESLKWSWMPENLSPFMTDEKGNFRKNELLEQIVTSTDQSDYLWYRTSLNHKGEGSYKLYVNTTGHELYAFVNGKLIGKNHSADGDFVFQLESPVKLHDGKNYISLLSATVGLKNYGPSFEKMPTGIVGGPVKLIDSNGTAIDLSNSSWSYKATFEAPSGEDAVVVDLLGLNKGVAWVNGNNLGRYWPSYTAAEMAGCHRCDYRGAFQAEGDGTRCLTGCGEPSQRYYHVPRSFLAAGEPNTLLLFEEAGGDPSGVALRTVVPGAVCTSGEAGDAVTLSCGGGHAVSSVDVASFGVGRGRCGGYEGGCESKAAYEAFTAACVGKESCTVEITGAFAGAGCLSGVLTVQATC

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.116007

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_01g0533400 RBH 0.0 0.087422 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os01g34920 RBH 0.0 0.058798 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os01g0533400 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_01g0020240 RBH 0.0 0.0 5.256988
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_06g0022980 RBH 0.0 0.0 0.675935
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_01g0020190 RBH 0.0 0.0 10.244743
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_01g0019580 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_01g0019480 RBH 0.0 0.0 6.108377
Minghui 63 | MH63RS3 | HZAU OsMH63_01G0329000 RBH 2.241079 4.784138 5.1689765
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_01g0019540 RBH 0.0 0.0 0.683152
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_01G0327400 RBH 0.298426 0.04393 0.0236815
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_01g0019550 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_01g0019460 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_01g0019730 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_01g0019480 RBH 0.0 0.0 0.684811
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_01g0019370 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_01G019890 RBH 0.0 0.0 0.733806
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_01g0019600 RBH 0.0 0.0 5.104542
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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