Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsAzu_01g0020240 | OGI:01061870 | 16/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr01:19938467-19945080 | ||||||||
| Gene Symbol | BGAL5, OsBgal5, OsBGal5, RMP1 | ||||||||||
| DNA seq | AACCACTCGATCGTAAAAGTACTTCATAGATGAAATATTTGGTCCCAGTATATATCACACTCTGCGTCTCTGCAATCAACAGTTGATCAGAGAACCCTAATTAATAAACTCACTTTTTACCCCCGAATTAACACATGCACCAGGGGCGACTACCAGCTTAACTCAATAAACAAACCATCCTAATTAAGCGACTAATTAAAGACCTAATTAATCAAAGACATGGCCACTCCATATATATGCATGTAGATCAATCAGCAAGTGGCCTGGACGGTGAGCACGCCGGACAGGCACCCGGCGCCGGCGAACGCGCCGGTGATCTCCACCGTGCACGACTCCTTCCCGACGCACGCCGCCGTGAACGCCTCGTACGCCGCCTTGGACTCGCACCCGCCCTCGTAGCCGCCGCACCGCCCGCGCCCCACGCCGAAGCTGGCCACGTCGACGCTCGACACGGCGTGGCCGCCGCCGCACGACAGCGTGACGGCGTCCCCGGCCTCGCCGGAGGTGCACACGGCACCGGGCACCACGGTGCGGAGGGCGACGCCCGAGGGGTCGCCGCCGGCCTCCTCGAAGAGGAGCAGCGTGTTGGGCTCGCCGGCGGCGAGGAAGGAGCGCGGCACGTGGTAGTAGCGCTGCGACGGCTCGCCGCAGCCCGTGAGGCACCTGGTGCCGTCGCCCTCCGCCTGGAACGCGCCGCGGTAGTCGCAGCGGTGGCAGCCGGCCATCTCCGCCGCCGTGTACGACGGCCAGTAGCGGCCGAGGTTGTTGCCGTTCACCCACGCCACGCCCTTGTTCAAGCCCAGCAGGTCCACCACCACCGCGTCCTCGCCGGACGGAGCTTCAAATGTAGCCTTCATAACAAAAAAAAAAAGTAACCAAAGTATTAAGATTGTTTTGGCGGTGAAAGAATTAATGACATGATGAAATTTCATAGGGAAGGTAAATTAAGTAAATTGTAGTCTTCATAAGAAAACAAAAAAAGTATTAAAAATCCTTTTATTTTTGCAGGTGAAAGAATGAAACGATGAAATGAAATCATACAGGTAATTAAATTACTCCAGTTTCATAATTGATAAGTTTTAGGTTAAACTTTTATAAATTAACTAATAATGACTTTAAAAATATCTAGTTTAAAGGCACCAAAACAACATATATAAATTTGACTTACAAAGTACTATAACAAAAGTAATATATATATATTTATATTAATATATTGTAATAGAGAAATATAGTCAGAAATATATTTTGAAAATTATGTCATTGTTCAGAATGTTAAGAATTATAAAACCGGAGAGAGTGAGTAAATAATGGACATATACTGTACCTTGTACCAAGTAAAAGGCCTGTTGATGGGGATGGTGCCATTGTTGCCATTCCATTTGTAGCCTGGCTTGTCAAGATGGATCTGCCTGTACTCACTAGCCAAGCCAGCCTACAACACAAAAAAACATCAAAGCAAGAAACACTATATGATCAATACCAGCAAAGTTAACAAACAACTAAGCATTGATGAAAAATAATGTGTAACCTTATAAGACCAGGAGCTGTTGGAGAGATCAATTGCGGTGCCATTGCTGTCTATCAGCTTAACAGGGCCTCCAACAATGCCCGTGGGCATCTTTTCGAACGAAGGGCCATAGTTCTGTTTACCAAGAATGATCAAACAATTTATCACTGGTATACATGATTAATTGCAAATAAAGAAGATGAGTTCGTTGCTGATACGATGGAAGTGAGCATTCAAGAAAGAAAATTAGGAACCTTGAGGCCAACGGTTGCACTCAGAAGAGAGATGTAGTTCTTGCCATCATGGAGCTTCACCGGCGACTCTAGTTGGAAGACAAAATCTCCATCGGCAGAATGGTTTTTCCCTGACAAATTATGAACACACATGTTTGTCAATGAACATTCTTTAATTTTGACCCGCAGGTTCACAAACATTCTTTAATTTCGACCCACAGAGAATTAAAAGAATGGTGCAACGAAAATATGGAAAAAAAATAACTTTGATACTCACCAATAAGCTTCCCGTTCACAAAGGCATAAAGTTCATGGCCAGTCGTGTTCACGTACAATTTGTAGCTCCCTTCTCCTTTGTGATTAAGACTGCAATTTTTTTTTTGTTGGTGACGTTCTAAATTTGTAACATATATATATTTTTTTGTCGGAATCATTTCAAATTTACATCATCATGATCTCTTTTCTTTAGTATAAAGAGATTTTTTTTTAAAAAAAATACCTTGTTCTGTACCACAGGTAATCACTTTGATCGGTTGACGTGACGATCTGCTCCAAGAGCTCATTCTTCCTAAAGTTGCCCTTCTCATCGGTCATGAAAGGACTCAAGTTTTCAGGCATCCAAGACCATTTTAGGCTCTCCTGCTCCTGCTCCGCCGTGTTGGGTTTCTTCACCATGACAGACGTCTGGGTCTTAATCTAGGTCATACCAAGAGGAAAACAAAATTAAGAGATGAATTATAGACCTTACACTTGGTCTCATTTTAATTTCATTATTGATTATTGAGAAAGGAAAAATACCTTGGCGCTATTGAAGGCAACAGTCTTGCAGTCAGGCAAGATGCTGACTGACCATGCAGGCAGGAGGTGAGTGGCTCCATCGAGGGTCACATTGACATCTTTATCATCAAATCTGTTGTTGATGAAGCAAGCAGATGAGGAGTCCAGAGTGTACTTGGTAACCTACATTGATCAGAGATAGTACCAATATGCATGCATTAGATATGTTTGCATTAGACGTGATAATTTTGATTAAAAGAAGGGCGTGATCTGAATATTACTGTGATGTTATCGCCATAGTTGGTGTCAAAATACTCTCCATGGACAAGAGTTTTCTCCATGGACTTGAGCACGGAGTGGAGTTCCTTCAAGTGACCATATTTGGGTTGCCTGAGATTACCTGTAATAAATCAAAAGTAGACCAACAAGATTATAATTAAAATAAGACAAAAAATTGCTTTCTTATTCAAATTCACCATATAATTAACAGTACGGTAAAATATATTAATCAAAGCTTACCATACTCATCCAAAGGCGCGTCATAATCATAGCTTGTTGTGATGTACGGACCTCCGGAGGTACGACCAAAGTTGGTTCCACCATGGTACTAACAAAAAATGGAAAAAAAAAACTCAGCATAAATCAACGAAAATTCAGTCATTGTGAAAGAGATACAAGCTAGCCAGCATACCATATAGTAATTTTGCAGAGATCCACGCTTTTGGAAGAACATCGCAACCGCAAAAGCAATGTCTTCAGCTGACCTATGGAAATCCGGCTTGTCCCAAGCTTTGAACCTAACGTTAAGTACATCAACAAATTAAGATAAATCTCCTCCATGTTCATCAAAAAATAATTTTGCAAACAAAGAGATATATGTACTAAAAGTTAATTTTGTAAACAATGAGAGAAATACTAATGGAAGAAAAAAAAATACCAGCCAGTCCAGTTCTCTGTCCAAATCTTAGGGATGCCTGTCCTATTTGGAAACCAGTCATGGCAATAGAATCCATTACAGGTATTGACCTAGAGCGGTCCAAAACAATGACAAACTCATGTTATTAGATGAGTGATAAACAAATAAATTCATATAATATTCTATATTCTTGTGGGATTAAAACCCATGCTCACCACATTGTGCGGCACATCGTCGTCTTGTTGACACATGATCCATGGGACACCGACGTTCTGCTTGTTCGCCATGTCAGCACACCAGTGGATGTATTCAGATGCAGACTGGTTGTTGTTTAATTTCCCCATGATGTTTCCATACTCATTCTCAATCTGTGCATTGATCCATTAATGCATTGATATTAATTGACAATATATATTGTGGAATGACAATAGTACAAATTATTAACATGCTAATTTCCCATTGTTCAATCATATTGAAGAATGATCATTACAATACCTGAGCAAGGATGATCGGTCCTCCTTGTTCAGCAAACATTTTTGAATCCTTCATCTTGTTAACTATAAGAGTGGTGAATGTCTCCATCTCATTCTATATCATGGAAAAAAACACTTGCATTAATTATATGCTAGTATATGTAAAAGTACACAAAAATAGATGAGAATTTTATTATTATTATTATTATTTAACCTCAAAAGGCTCATTATGCAGCCTAAACTGCATTCCAGGGATGTCGCGTAGCCAAGCTGGAAGTCCTCTGCACATTTGGCATTTGTTTTAGAAAACAACAAAACACAGTGAGCACTTCAACATGCATGCATGGACACATAATAATGTTATAGAAAGAAACTAGAGTAGTTTAGTGTGCTCGCTTGTTTCCTCTTATTCTATATGAACACTATAGATATAATATTTGATTAATTTGCAGATCGATATAATAGTCTATTCTATTTCGTTTTTTTCTCTAATTCTATATGAACATTATAGATATAATATTCGATTAATTTGCAGATCAATATAATATTCTATTCTATTTATCACTTTGACACACAAATGCTTTAGCATTTATATACATGATACATACCCATAGTTCCATTCGCCACAGATGTACGGGCCAATGCGAAGAATGGCGTACATGCCGGCATTCTGGATCTCCTTGAAGAACCTGACGACATCGTAGTTACCCTCAAAATTGTACTGCCGATCAAAGCAAAAACATTGTTATAGTATTACTAGTATTTATCCATGGTTGTTATTGTATGTAATAGCTGCAGTACGTAGTAGTGTTTATGTGCTAAAGCAAAAGTAGTAATATTGAACCTGGCGGCGGTGCGGCTCATGGCCGTTCCAAAAGATGTAAGTCTCGATGGCATCGAGACCACCTTCCTTCGCCTTCTTGATCAGATCCGGCCACATCTGCATAGCAACAATAAGATTAGATTAGATAGAAAAAAATCAAATTAATCTTTTGCGCACGTACATATATTGCTTATGTTCATTAATTTCTTAACACAAATTAAGAAAATAAAGATCGAACGAATATAAGTCACAACATAATATGCATGCATAAGTATATAAAAGTATAGAACATAAAACTCCTCGCACTGCTTAGCTCATCACGATCTATGGCACAAAAAGAAAAGAAACACTCAAGCAAGCAACTCTGTATCCTACTAGTACAAAACACTCAAAGTTGTATATGCATTTAATTTGCAGATTAATATTATCAACTATCTCTATTTTTTAATACATGATGTTGTTGATTTTTTCACACATTTAACCATTCTTCTTATTAAAAAAACATAATTATAATTTATTTTTTGTGAGTTGTTTTATCACTCAAAGTATTTTAAGCATGATTTATACCTTATGTATCTCCATAAATTATTACAAATGTTCAAACATATTAAAAAATTAACGACATCATGTATTGAAAAACAAAAATAGTATACACTAGGAATATCTATACCTATACAGCGTTAACCTGGTGAATCTGCCGTTGATCAAATAGACCCACACATTATTAATTTATAGTTAATATCATGGTCCCATGGGCCTCACAAATCCCATCCAATAATCTCTACATACAATTTTGTTGGGAATTCAGTTGGATATATTGCCGATGATCTGGATTTCAAGCGGAGGCATCAACACAAATGGAAATAGAGATGAACTTTAGGACGCGCTCAGATATCTCCAAGTCGATCGGGTATTATTGTTTCTCAATCTAGATTGGTTTCTCATCTCAAACAATTTTAACCTGGGTAAACTATATATATGACACGGTTGAAAAATGAGCACCTGGAAGAGTACATAGTAACGTGCTAATTACTTTGCTGACAGAGTTTAGTCTATGATTATGTTGACTACACGGACAGAATTTTGGACAATGATTATGTTGCTACCAACATATGATTAATTCCGTGGCTACTTTTTTTATTTCTTTTTACATGTACAGATTGGATCTAATGCCAAAATTTATTTAATTAATTAGTTTTCCACTTAACACATTACTACGCATAGTTACAATTTCAATATAATTCTCAACGGTGATAACAATATCAATATTGTACACCATTCATAATACATGGATCTTACCATTTTAAAAATATACAACGAATTCTATGATTAAAATATAATTCACTCAGAAAACAAATTAAAAATCACCATATTGCAGTTGGCATTAATTTGCCATCAATTTAAACCATTCCTATACGATTTTGTATGACTGAAATACTATCAGAGTAAAATTTTATAGGGCTAAAAAATAATATTTAAAATTATCTCGTGCGTTGCACGGGTTGACGGCTAGTATAACAAGTCGGTTACCTCGGGAGTGCTCCGGGGATAATGGATGGAACCAGAGAGGATGATCCGGCGCTGGCCGTCGATGACGAGGCTGCGGTCGTCGTAGCTGACGCTGGTGCAGCCCACGGCATCGGCCGCCACGGCGAGGACCAGCAGCGCCACCCACCACCGGCACCAGCTGCTGCCGCGCCGTCCCATCATACTGCTGCTAATTTGAAGTTAATTAGCTAGGCTACAGGGGAGGAGGGGAGGAGAGGAGGAGACGAGATGAGTTGCAACTTTGCAGATGCAAGCGATCGAATTGCAGAGATCGGGCGTGGGGGTGATACGGAATTTATAGGCCGCAGCGATACGATGCGCCGTACGTTGGAGATAG
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| CDS seq | ATGATGGGACGGCGCGGCAGCAGCTGGTGCCGGTGGTGGGTGGCGCTGCTGGTCCTCGCCGTGGCGGCCGATGCCGTGGGCTGCACCAGCGTCAGCTACGACGACCGCAGCCTCGTCATCGACGGCCAGCGCCGGATCATCCTCTCTGGTTCCATCCATTATCCCCGGAGCACTCCCGAGATGTGGCCGGATCTGATCAAGAAGGCGAAGGAAGGTGGTCTCGATGCCATCGAGACTTACATCTTTTGGAACGGCCATGAGCCGCACCGCCGCCAGTACAATTTTGAGGGTAACTACGATGTCGTCAGGTTCTTCAAGGAGATCCAGAATGCCGGCATGTACGCCATTCTTCGCATTGGCCCGTACATCTGTGGCGAATGGAACTATGGAGGACTTCCAGCTTGGCTACGCGACATCCCTGGAATGCAGTTTAGGCTGCATAATGAGCCTTTTGAGAATGAGATGGAGACATTCACCACTCTTATAGTTAACAAGATGAAGGATTCAAAAATGTTTGCTGAACAAGGAGGACCGATCATCCTTGCTCAGATTGAGAATGAGTATGGAAACATCATGGGGAAATTAAACAACAACCAGTCTGCATCTGAATACATCCACTGGTGTGCTGACATGGCGAACAAGCAGAACGTCGGTGTCCCATGGATCATGTGTCAACAAGACGACGATGTGCCGCACAATGTGGTCAATACCTGTAATGGATTCTATTGCCATGACTGGTTTCCAAATAGGACAGGCATCCCTAAGATTTGGACAGAGAACTGGACTGGCTGGTTCAAAGCTTGGGACAAGCCGGATTTCCATAGGTCAGCTGAAGACATTGCTTTTGCGGTTGCGATGTTCTTCCAAAAGCGTGGATCTCTGCAAAATTACTATATGTACCATGGTGGAACCAACTTTGGTCGTACCTCCGGAGGTCCGTACATCACAACAAGCTATGATTATGACGCGCCTTTGGATGAGTATGGTAATCTCAGGCAACCCAAATATGGTCACTTGAAGGAACTCCACTCCGTGCTCAAGTCCATGGAGAAAACTCTTGTCCATGGAGAGTATTTTGACACCAACTATGGCGATAACATCACAGTTACCAAGTACACTCTGGACTCCTCATCTGCTTGCTTCATCAACAACAGATTTGATGATAAAGATGTCAATGTGACCCTCGATGGAGCCACTCACCTCCTGCCTGCATGGTCAGTCAGCATCTTGCCTGACTGCAAGACTGTTGCCTTCAATAGCGCCAAGATTAAGACCCAGACGTCTGTCATGGTGAAGAAACCCAACACGGCGGAGCAGGAGCAGGAGAGCCTAAAATGGTCTTGGATGCCTGAAAACTTGAGTCCTTTCATGACCGATGAGAAGGGCAACTTTAGGAAGAATGAGCTCTTGGAGCAGATCGTCACGTCAACCGATCAAAGTGATTACCTGTGGTACAGAACAAGTCTTAATCACAAAGGAGAAGGGAGCTACAAATTGTACGTGAACACGACTGGCCATGAACTTTATGCCTTTGTGAACGGGAAGCTTATTGGGAAAAACCATTCTGCCGATGGAGATTTTGTCTTCCAACTAGAGTCGCCGGTGAAGCTCCATGATGGCAAGAACTACATCTCTCTTCTGAGTGCAACCGTTGGCCTCAAGAACTATGGCCCTTCGTTCGAAAAGATGCCCACGGGCATTGTTGGAGGCCCTGTTAAGCTGATAGACAGCAATGGCACCGCAATTGATCTCTCCAACAGCTCCTGGTCTTATAAGGCTACATTTGAAGCTCCGTCCGGCGAGGACGCGGTGGTGGTGGACCTGCTGGGCTTGAACAAGGGCGTGGCGTGGGTGAACGGCAACAACCTCGGCCGCTACTGGCCGTCGTACACGGCGGCGGAGATGGCCGGCTGCCACCGCTGCGACTACCGCGGCGCGTTCCAGGCGGAGGGCGACGGCACCAGGTGCCTCACGGGCTGCGGCGAGCCGTCGCAGCGCTACTACCACGTGCCGCGCTCCTTCCTCGCCGCCGGCGAGCCCAACACGCTGCTCCTCTTCGAGGAGGCCGGCGGCGACCCCTCGGGCGTCGCCCTCCGCACCGTGGTGCCCGGTGCCGTGTGCACCTCCGGCGAGGCCGGGGACGCCGTCACGCTGTCGTGCGGCGGCGGCCACGCCGTGTCGAGCGTCGACGTGGCCAGCTTCGGCGTGGGGCGCGGGCGGTGCGGCGGCTACGAGGGCGGGTGCGAGTCCAAGGCGGCGTACGAGGCGTTCACGGCGGCGTGCGTCGGGAAGGAGTCGTGCACGGTGGAGATCACCGGCGCGTTCGCCGGCGCCGGGTGCCTGTCCGGCGTGCTCACCGTCCAGGCCACTTGCTGA
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| Protein seq | MMGRRGSSWCRWWVALLVLAVAADAVGCTSVSYDDRSLVIDGQRRIILSGSIHYPRSTPEMWPDLIKKAKEGGLDAIETYIFWNGHEPHRRQYNFEGNYDVVRFFKEIQNAGMYAILRIGPYICGEWNYGGLPAWLRDIPGMQFRLHNEPFENEMETFTTLIVNKMKDSKMFAEQGGPIILAQIENEYGNIMGKLNNNQSASEYIHWCADMANKQNVGVPWIMCQQDDDVPHNVVNTCNGFYCHDWFPNRTGIPKIWTENWTGWFKAWDKPDFHRSAEDIAFAVAMFFQKRGSLQNYYMYHGGTNFGRTSGGPYITTSYDYDAPLDEYGNLRQPKYGHLKELHSVLKSMEKTLVHGEYFDTNYGDNITVTKYTLDSSSACFINNRFDDKDVNVTLDGATHLLPAWSVSILPDCKTVAFNSAKIKTQTSVMVKKPNTAEQEQESLKWSWMPENLSPFMTDEKGNFRKNELLEQIVTSTDQSDYLWYRTSLNHKGEGSYKLYVNTTGHELYAFVNGKLIGKNHSADGDFVFQLESPVKLHDGKNYISLLSATVGLKNYGPSFEKMPTGIVGGPVKLIDSNGTAIDLSNSSWSYKATFEAPSGEDAVVVDLLGLNKGVAWVNGNNLGRYWPSYTAAEMAGCHRCDYRGAFQAEGDGTRCLTGCGEPSQRYYHVPRSFLAAGEPNTLLLFEEAGGDPSGVALRTVVPGAVCTSGEAGDAVTLSCGGGHAVSSVDVASFGVGRGRCGGYEGGCESKAAYEAFTAACVGKESCTVEITGAFAGAGCLSGVLTVQATC |
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| Function | Beta-galactosidase 1 [UniProtKB/Swiss-Prot:Q8RUV9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_01g0020240 | OsAzu_01g0020240.01 | Chr01 | 19938718 | 19945080 | - | NAM | ||
| CDS seq | ATGATGGGACGGCGCGGCAGCAGCTGGTGCCGGTGGTGGGTGGCGCTGCTGGTCCTCGCCGTGGCGGCCGATGCCGTGGGCTGCACCAGCGTCAGCTACGACGACCGCAGCCTCGTCATCGACGGCCAGCGCCGGATCATCCTCTCTGGTTCCATCCATTATCCCCGGAGCACTCCCGAGATGTGGCCGGATCTGATCAAGAAGGCGAAGGAAGGTGGTCTCGATGCCATCGAGACTTACATCTTTTGGAACGGCCATGAGCCGCACCGCCGCCAGTACAATTTTGAGGGTAACTACGATGTCGTCAGGTTCTTCAAGGAGATCCAGAATGCCGGCATGTACGCCATTCTTCGCATTGGCCCGTACATCTGTGGCGAATGGAACTATGGAGGACTTCCAGCTTGGCTACGCGACATCCCTGGAATGCAGTTTAGGCTGCATAATGAGCCTTTTGAGAATGAGATGGAGACATTCACCACTCTTATAGTTAACAAGATGAAGGATTCAAAAATGTTTGCTGAACAAGGAGGACCGATCATCCTTGCTCAGATTGAGAATGAGTATGGAAACATCATGGGGAAATTAAACAACAACCAGTCTGCATCTGAATACATCCACTGGTGTGCTGACATGGCGAACAAGCAGAACGTCGGTGTCCCATGGATCATGTGTCAACAAGACGACGATGTGCCGCACAATGTGGTCAATACCTGTAATGGATTCTATTGCCATGACTGGTTTCCAAATAGGACAGGCATCCCTAAGATTTGGACAGAGAACTGGACTGGCTGGTTCAAAGCTTGGGACAAGCCGGATTTCCATAGGTCAGCTGAAGACATTGCTTTTGCGGTTGCGATGTTCTTCCAAAAGCGTGGATCTCTGCAAAATTACTATATGTACCATGGTGGAACCAACTTTGGTCGTACCTCCGGAGGTCCGTACATCACAACAAGCTATGATTATGACGCGCCTTTGGATGAGTATGGTAATCTCAGGCAACCCAAATATGGTCACTTGAAGGAACTCCACTCCGTGCTCAAGTCCATGGAGAAAACTCTTGTCCATGGAGAGTATTTTGACACCAACTATGGCGATAACATCACAGTTACCAAGTACACTCTGGACTCCTCATCTGCTTGCTTCATCAACAACAGATTTGATGATAAAGATGTCAATGTGACCCTCGATGGAGCCACTCACCTCCTGCCTGCATGGTCAGTCAGCATCTTGCCTGACTGCAAGACTGTTGCCTTCAATAGCGCCAAGATTAAGACCCAGACGTCTGTCATGGTGAAGAAACCCAACACGGCGGAGCAGGAGCAGGAGAGCCTAAAATGGTCTTGGATGCCTGAAAACTTGAGTCCTTTCATGACCGATGAGAAGGGCAACTTTAGGAAGAATGAGCTCTTGGAGCAGATCGTCACGTCAACCGATCAAAGTGATTACCTGTGGTACAGAACAAGTCTTAATCACAAAGGAGAAGGGAGCTACAAATTGTACGTGAACACGACTGGCCATGAACTTTATGCCTTTGTGAACGGGAAGCTTATTGGGAAAAACCATTCTGCCGATGGAGATTTTGTCTTCCAACTAGAGTCGCCGGTGAAGCTCCATGATGGCAAGAACTACATCTCTCTTCTGAGTGCAACCGTTGGCCTCAAGAACTATGGCCCTTCGTTCGAAAAGATGCCCACGGGCATTGTTGGAGGCCCTGTTAAGCTGATAGACAGCAATGGCACCGCAATTGATCTCTCCAACAGCTCCTGGTCTTATAAGGCTACATTTGAAGCTCCGTCCGGCGAGGACGCGGTGGTGGTGGACCTGCTGGGCTTGAACAAGGGCGTGGCGTGGGTGAACGGCAACAACCTCGGCCGCTACTGGCCGTCGTACACGGCGGCGGAGATGGCCGGCTGCCACCGCTGCGACTACCGCGGCGCGTTCCAGGCGGAGGGCGACGGCACCAGGTGCCTCACGGGCTGCGGCGAGCCGTCGCAGCGCTACTACCACGTGCCGCGCTCCTTCCTCGCCGCCGGCGAGCCCAACACGCTGCTCCTCTTCGAGGAGGCCGGCGGCGACCCCTCGGGCGTCGCCCTCCGCACCGTGGTGCCCGGTGCCGTGTGCACCTCCGGCGAGGCCGGGGACGCCGTCACGCTGTCGTGCGGCGGCGGCCACGCCGTGTCGAGCGTCGACGTGGCCAGCTTCGGCGTGGGGCGCGGGCGGTGCGGCGGCTACGAGGGCGGGTGCGAGTCCAAGGCGGCGTACGAGGCGTTCACGGCGGCGTGCGTCGGGAAGGAGTCGTGCACGGTGGAGATCACCGGCGCGTTCGCCGGCGCCGGGTGCCTGTCCGGCGTGCTCACCGTCCAGGCCACTTGCTGA
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| Protein seq | MMGRRGSSWCRWWVALLVLAVAADAVGCTSVSYDDRSLVIDGQRRIILSGSIHYPRSTPEMWPDLIKKAKEGGLDAIETYIFWNGHEPHRRQYNFEGNYDVVRFFKEIQNAGMYAILRIGPYICGEWNYGGLPAWLRDIPGMQFRLHNEPFENEMETFTTLIVNKMKDSKMFAEQGGPIILAQIENEYGNIMGKLNNNQSASEYIHWCADMANKQNVGVPWIMCQQDDDVPHNVVNTCNGFYCHDWFPNRTGIPKIWTENWTGWFKAWDKPDFHRSAEDIAFAVAMFFQKRGSLQNYYMYHGGTNFGRTSGGPYITTSYDYDAPLDEYGNLRQPKYGHLKELHSVLKSMEKTLVHGEYFDTNYGDNITVTKYTLDSSSACFINNRFDDKDVNVTLDGATHLLPAWSVSILPDCKTVAFNSAKIKTQTSVMVKKPNTAEQEQESLKWSWMPENLSPFMTDEKGNFRKNELLEQIVTSTDQSDYLWYRTSLNHKGEGSYKLYVNTTGHELYAFVNGKLIGKNHSADGDFVFQLESPVKLHDGKNYISLLSATVGLKNYGPSFEKMPTGIVGGPVKLIDSNGTAIDLSNSSWSYKATFEAPSGEDAVVVDLLGLNKGVAWVNGNNLGRYWPSYTAAEMAGCHRCDYRGAFQAEGDGTRCLTGCGEPSQRYYHVPRSFLAAGEPNTLLLFEEAGGDPSGVALRTVVPGAVCTSGEAGDAVTLSCGGGHAVSSVDVASFGVGRGRCGGYEGGCESKAAYEAFTAACVGKESCTVEITGAFAGAGCLSGVLTVQATC
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_01g0020240 | OsAzu_01g0020240.02 | Chr01 | 19938467 | 19945008 | - | IsoSeq | ||
| CDS seq | ATGTGCCGCACAATGTGGTCAATACCTGTAATGGATTCTATTGCCATGACTGGTTTCCAAATAGGACAGGCATCCCTAAGATTTGGACAGAGAACTGGACTGGCTGGTTCAAAGCTTGGGACAAGCCGGATTTCCATAGGTCAGCTGAAGACATTGCTTTTGCGGTTGCGATGTTCTTCCAAAAGCGTGGATCTCTGCAAAATTACTATATGTACCATGGTGGAACCAACTTTGGTCGTACCTCCGGAGGTCCGTACATCACAACAAGCTATGATTATGACGCGCCTTTGGATGAGTATGGTAATCTCAGGCAACCCAAATATGGTC
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| Protein seq | MCRTMWSIPVMDSIAMTGFQIGQASLRFGQRTGLAGSKLGTSRISIGQLKTLLLRLRCSSKSVDLCKITICTMVEPTLVVPPEVRTSQQAMIMTRLWMSMVISGNPNMV |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| SE | Chr01 | 19939317 | 19939995 | - | OsAzu_01g0020240.02 | OsAzu_01g0020240.01,OsAzu_01g0020240.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 5.256988 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0533400 | RBH | 0.0 | 0.087422 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g34920 | RBH | 0.0 | 0.058798 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0533400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0023160 | SBH | 0.0 | 0.0 | 2.616188 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0019870 | RBH | 0.0 | 0.0 | 0.116007 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0020190 | RBH | 0.0 | 0.0 | 10.244743 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0019580 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0019480 | RBH | 0.0 | 0.0 | 6.108377 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0329000 | RBH | 2.241079 | 4.784138 | 5.1689765 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0019540 | RBH | 0.0 | 0.0 | 0.683152 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0327400 | RBH | 0.298426 | 0.04393 | 0.0236815 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0019550 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0019460 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0019730 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0019480 | RBH | 0.0 | 0.0 | 0.684811 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0019370 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G019890 | RBH | 0.0 | 0.0 | 0.733806 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0019600 | RBH | 0.0 | 0.0 | 5.104542 |
