Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKYG_08g0011480 | OGI:08019660 | 16/16 | KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | Chr08:14736165-14737715 | ||||||||
| Gene Symbol | OsFbox439, Os_F0320 | ||||||||||
| DNA seq | TTACATAGGCTTGACCTCGAAGCGGCCAACGATTGGTAAGTTCCTCCGCTGAAATGAATCAGCTCTCCACTTTTCAACCTTCTGGTCCAGGAAGAACTGTGCTGTGTCATCAACGTGCAACTCCTCGAGAACCATGGCGTTCTCCACCAGGAACTTGGTGAGATGGACCGGAAAACTGTCCATCTCCTTGGCCGTGAATTCCATGGTCACCTTCCTGACGGTTTTCTCCAAACATTCGATTGCCGGCTCGCTTACGCGCTGACGCTTAAGCTCAAGATCACCTTCGTCCTTGGAAGAAGAACTTGAGCTTGACTCGATCCTCCTCCCAATGGAGTTCCCGGATATCCTTCGGTTGAAGCGCTGTTCTTCGGACACGGGGTGGCTGTGGCTGTCATCCTTCGTTGTTAGCCTGAGCCGGAGTTCAGAAACAGCTGGGCAGGATTGGAGCAGCTTCGCCATTGCTGACAACGATATGGGCGTCTGATAGCGGCTGTGCAGGTACTGTGCTTCCAGGTGGAGGAACGCGAGGTTGGGGAAGACGGGGAGGGCGCCGCCGCCGCCGTCGTCGAGAATGTCGTCGACGCAGTACACGCGCAGCGTCATGGCCCTCATCGTCGTGGTGTCGCCGCCGCCGAGGCTGCGGAGGACGCGGCACACCGGCTCGTACTTCCCGGTGAAGAAGGAAGGTCGGCTGATGTCCACGTCGACGAGCGCGAGGTTCGCCGGCGGTGGTGCCAGCGAGATCGCCATCGGGTGCCCGCCGTACGAGAAGGAGACCAGGCTCGGCGCGTCGAGCTGGAGTGCTTCGATCCTTGACGTCACGGCGACGAGCACGAGCGTCGTCACCGTCGGGCAGCGGAGGCGGAGGACGGCGGTCTCCTCCTTCGTCTTCGCCGCCGAGATCAGGAGATGGACACGGTCCAGTCTGAGCATGGCGAGCCTCGGCGCGGCGTCGACGATGGTCTGGAGGAGGTGACCACCCTTGGACAGCGACAGCATGCATCTGGTCATCGCTAGATCCGTCAGGGACGGGAACGCCGCCACGACGGACGGCGGCGACGAGTAGCAGCAGCAGCACGCGAGGTGCAGCACCCGCAGCGTGGCGGCGCACGGCAGCGACGCTAGCCGCAGCTTGTACATGCCGATGGTGTCGCCGGCGTCGCCGGCGCCGGCGACCGGTAGACAATCGACGCGGAGGTCCTGCAGCCCGGCCGCGGCGCGGTGGGAGAGGATTGCGCCGATCCTGCTGTCGAAGTTGGAGAGAACAGGGCGTGCCGCAGCCGAGTCCACGGCGAGCGAGAGCTTCTTGAGGGCTGGGTCGTCGCCACGGCGGAGGACGGCGGCGAGGGCGCCGTCGGCGAAGCGGAAGAAGGCATTGTGTGTGGGGAGGAAGGGTTCGGAGTAGAGGTTGAGGACGCAGGTCCGGCGCCACAGGGGACGCCACCTGCGTGAGAGGACGGTGGTGGCGGCGGCGTCCTTGGTGTGCAGGGAGGAGAGGATGTGCAGGAGTAGGTCGTCGGAGAGTTCAGAGATGCGATCCACGGCGGCCAT
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| CDS seq | ATGGCCGCCGTGGATCGCATCTCTGAACTCTCCGACGACCTACTCCTGCACATCCTCTCCTCCCTGCACACCAAGGACGCCGCCGCCACCACCGTCCTCTCACGCAGGTGGCGTCCCCTGTGGCGCCGGACCTGCGTCCTCAACCTCTACTCCGAACCCTTCCTCCCCACACACAATGCCTTCTTCCGCTTCGCCGACGGCGCCCTCGCCGCCGTCCTCCGCCGTGGCGACGACCCAGCCCTCAAGAAGCTCTCGCTCGCCGTGGACTCGGCTGCGGCACGCCCTGTTCTCTCCAACTTCGACAGCAGGATCGGCGCAATCCTCTCCCACCGCGCCGCGGCCGGGCTGCAGGACCTCCGCGTCGATTGTCTACCGGTCGCCGGCGCCGGCGACGCCGGCGACACCATCGGCATGTACAAGCTGCGGCTAGCGTCGCTGCCGTGCGCCGCCACGCTGCGGGTGCTGCACCTCGCGTGCTGCTGCTGCTACTCGTCGCCGCCGTCCGTCGTGGCGGCGTTCCCGTCCCTGACGGATCTAGCGATGACCAGATGCATGCTGTCGCTGTCCAAGGGTGGTCACCTCCTCCAGACCATCGTCGACGCCGCGCCGAGGCTCGCCATGCTCAGACTGGACCGTGTCCATCTCCTGATCTCGGCGGCGAAGACGAAGGAGGAGACCGCCGTCCTCCGCCTCCGCTGCCCGACGGTGACGACGCTCGTGCTCGTCGCCGTGACGTCAAGGATCGAAGCACTCCAGCTCGACGCGCCGAGCCTGGTCTCCTTCTCGTACGGCGGGCACCCGATGGCGATCTCGCTGGCACCACCGCCGGCGAACCTCGCGCTCGTCGACGTGGACATCAGCCGACCTTCCTTCTTCACCGGGAAGTACGAGCCGGTGTGCCGCGTCCTCCGCAGCCTCGGCGGCGGCGACACCACGACGATGAGGGCCATGACGCTGCGCGTGTACTGCGTCGACGACATTCTCGACGACGGCGGCGGCGGCGCCCTCCCCGTCTTCCCCAACCTCGCGTTCCTCCACCTGGAAGCACAGTACCTGCACAGCCGCTATCAGACGCCCATATCGTTGTCAGCAATGGCGAAGCTGCTCCAATCCTGCCCAGCTGTTTCTGAACTCCGGCTCAGGCTAACAACGAAGGATGACAGCCACAGCCACCCCGTGTCCGAAGAACAGCGCTTCAACCGAAGGATATCCGGGAACTCCATTGGGAGGAGGATCGAGTCAAGCTCAAGTTCTTCTTCCAAGGACGAAGGTGATCTTGAGCTTAAGCGTCAGCGCGTAAGCGAGCCGGCAATCGAATGTTTGGAGAAAACCGTCAGGAAGGTGACCATGGAATTCACGGCCAAGGAGATGGACAGTTTTCCGGTCCATCTCACCAAGTTCCTGGTGGAGAACGCCATGGTTCTCGAGGAGTTGCACGTTGATGACACAGCACAGTTCTTCCTGGACCAGAAGGTTGAAAAGTGGAGAGCTGATTCATTTCAGCGGAGGAACTTACCAATCGTTGGCCGCTTCGAGGTCAAGCCTATGTAA
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| Protein seq | MAAVDRISELSDDLLLHILSSLHTKDAAATTVLSRRWRPLWRRTCVLNLYSEPFLPTHNAFFRFADGALAAVLRRGDDPALKKLSLAVDSAAARPVLSNFDSRIGAILSHRAAAGLQDLRVDCLPVAGAGDAGDTIGMYKLRLASLPCAATLRVLHLACCCCYSSPPSVVAAFPSLTDLAMTRCMLSLSKGGHLLQTIVDAAPRLAMLRLDRVHLLISAAKTKEETAVLRLRCPTVTTLVLVAVTSRIEALQLDAPSLVSFSYGGHPMAISLAPPPANLALVDVDISRPSFFTGKYEPVCRVLRSLGGGDTTTMRAMTLRVYCVDDILDDGGGGALPVFPNLAFLHLEAQYLHSRYQTPISLSAMAKLLQSCPAVSELRLRLTTKDDSHSHPVSEEQRFNRRISGNSIGRRIESSSSSSSKDEGDLELKRQRVSEPAIECLEKTVRKVTMEFTAKEMDSFPVHLTKFLVENAMVLEELHVDDTAQFFLDQKVEKWRADSFQRRNLPIVGRFEVKPM |
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| Function | F-box/LRR-repeat protein 13 [UniProtKB/Swiss-Prot:Q9FWZ1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKYG_08g0011480 | OsKYG_08g0011480.01 | Chr08 | 14736165 | 14737715 | - | NAM | ||
| CDS seq | ATGGCCGCCGTGGATCGCATCTCTGAACTCTCCGACGACCTACTCCTGCACATCCTCTCCTCCCTGCACACCAAGGACGCCGCCGCCACCACCGTCCTCTCACGCAGGTGGCGTCCCCTGTGGCGCCGGACCTGCGTCCTCAACCTCTACTCCGAACCCTTCCTCCCCACACACAATGCCTTCTTCCGCTTCGCCGACGGCGCCCTCGCCGCCGTCCTCCGCCGTGGCGACGACCCAGCCCTCAAGAAGCTCTCGCTCGCCGTGGACTCGGCTGCGGCACGCCCTGTTCTCTCCAACTTCGACAGCAGGATCGGCGCAATCCTCTCCCACCGCGCCGCGGCCGGGCTGCAGGACCTCCGCGTCGATTGTCTACCGGTCGCCGGCGCCGGCGACGCCGGCGACACCATCGGCATGTACAAGCTGCGGCTAGCGTCGCTGCCGTGCGCCGCCACGCTGCGGGTGCTGCACCTCGCGTGCTGCTGCTGCTACTCGTCGCCGCCGTCCGTCGTGGCGGCGTTCCCGTCCCTGACGGATCTAGCGATGACCAGATGCATGCTGTCGCTGTCCAAGGGTGGTCACCTCCTCCAGACCATCGTCGACGCCGCGCCGAGGCTCGCCATGCTCAGACTGGACCGTGTCCATCTCCTGATCTCGGCGGCGAAGACGAAGGAGGAGACCGCCGTCCTCCGCCTCCGCTGCCCGACGGTGACGACGCTCGTGCTCGTCGCCGTGACGTCAAGGATCGAAGCACTCCAGCTCGACGCGCCGAGCCTGGTCTCCTTCTCGTACGGCGGGCACCCGATGGCGATCTCGCTGGCACCACCGCCGGCGAACCTCGCGCTCGTCGACGTGGACATCAGCCGACCTTCCTTCTTCACCGGGAAGTACGAGCCGGTGTGCCGCGTCCTCCGCAGCCTCGGCGGCGGCGACACCACGACGATGAGGGCCATGACGCTGCGCGTGTACTGCGTCGACGACATTCTCGACGACGGCGGCGGCGGCGCCCTCCCCGTCTTCCCCAACCTCGCGTTCCTCCACCTGGAAGCACAGTACCTGCACAGCCGCTATCAGACGCCCATATCGTTGTCAGCAATGGCGAAGCTGCTCCAATCCTGCCCAGCTGTTTCTGAACTCCGGCTCAGGCTAACAACGAAGGATGACAGCCACAGCCACCCCGTGTCCGAAGAACAGCGCTTCAACCGAAGGATATCCGGGAACTCCATTGGGAGGAGGATCGAGTCAAGCTCAAGTTCTTCTTCCAAGGACGAAGGTGATCTTGAGCTTAAGCGTCAGCGCGTAAGCGAGCCGGCAATCGAATGTTTGGAGAAAACCGTCAGGAAGGTGACCATGGAATTCACGGCCAAGGAGATGGACAGTTTTCCGGTCCATCTCACCAAGTTCCTGGTGGAGAACGCCATGGTTCTCGAGGAGTTGCACGTTGATGACACAGCACAGTTCTTCCTGGACCAGAAGGTTGAAAAGTGGAGAGCTGATTCATTTCAGCGGAGGAACTTACCAATCGTTGGCCGCTTCGAGGTCAAGCCTATGTAA
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| Protein seq | MAAVDRISELSDDLLLHILSSLHTKDAAATTVLSRRWRPLWRRTCVLNLYSEPFLPTHNAFFRFADGALAAVLRRGDDPALKKLSLAVDSAAARPVLSNFDSRIGAILSHRAAAGLQDLRVDCLPVAGAGDAGDTIGMYKLRLASLPCAATLRVLHLACCCCYSSPPSVVAAFPSLTDLAMTRCMLSLSKGGHLLQTIVDAAPRLAMLRLDRVHLLISAAKTKEETAVLRLRCPTVTTLVLVAVTSRIEALQLDAPSLVSFSYGGHPMAISLAPPPANLALVDVDISRPSFFTGKYEPVCRVLRSLGGGDTTTMRAMTLRVYCVDDILDDGGGGALPVFPNLAFLHLEAQYLHSRYQTPISLSAMAKLLQSCPAVSELRLRLTTKDDSHSHPVSEEQRFNRRISGNSIGRRIESSSSSSSKDEGDLELKRQRVSEPAIECLEKTVRKVTMEFTAKEMDSFPVHLTKFLVENAMVLEELHVDDTAQFFLDQKVEKWRADSFQRRNLPIVGRFEVKPM
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0150600 | SBH | 0.000000 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g24370 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0150600 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0011790 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0011910 | RBH | 0.050387 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0011990 | RBH | 0.000000 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0011830 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0011720 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0229000 | RBH | 0.041029 | 0 | 0.030456 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0011810 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0242400 | RBH | 0.0468695 | 0.00609 | 0.169909 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0011320 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0011350 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0011360 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0012130 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0011270 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G011590 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0011420 | SBH | 0.0 | 0.0 | 0.233884 |
