Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_12g0002000 | OGI:12004040 | 16/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr12:1371398-1380444 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TCCACTTGGAAGCAGCAGAAGCGGAAACCCGTCGCCCGCCTGGCTCGAGCTCAAGGCCATGGAGTAGTAAGTACCAATCCCTTGCTGTCCATTGCTACCTACCTGTATTTTAGTTTGCCCCTGTATTTCTGTCTCTGTATATGTCTGATTGATTGATTAGCGAAGATTTTCATGTGTTCTGTCCCAGTGATGAGCAGTTTAGTAATCTGAGCACTTGATTCAGTTCAGTTGGTGCTCCCTCCACTGCAATATGCTGTGAGGTTGAAGGAACCGATCGATCGATAATTCCATGTGCACTGTTGAGAATAGGCATTCTGAGGGACAGACATGATTCAGTTTAGTTTGCTTCTTCGTATTTTAGATTAGTGTTTTAATCTTCCTTTTCATTTCAGTGTGATTCTTGGTGTTAAATACTTTTGCTGGTGGAATGGAGTTGGAGCCTCAGTCCAGGCTTTGGTTTTCCCTGATCAGATCCAGTCCTAATTGCTTGTTTGTTTATCAGTTATGATCAGTCACTTGCTCTGACGATTCGGAGGGAGGATGAATAGCGGATCACAAAACGAGATGATTGATTCATGTGAGATCCAAGCACCCATCTTGAGCTGTATTTTCTTTAGAGTTCTTGACGGTCTGGAATCCTAATGTGTTCTCTTTCCATGGAAAATTTTTGGGCATTTCAGTTTCAGGGCGGCAAGGAGCCAAGGATGCAGCAGCACTAGGGTCCTAGTCCAAATTGTCAGCTGGGGGATCAATGGCAATGGCGGAGACGGTGAGGCTGCCCGAACAGCAGCGTCGCAGGCCTCTCACCATTGCCAGCCTCCCTGAAGAAATTATGTCGGAGATTCTGCTCCTGCTGCCGCCAAAATCCATCCTCCAGTGCCGTGCCGTCTGCAAGGCCTGGCGGGACGTCACCTCCGACCGCGCCTTCCTCCTCACCCACCACCGCCGCCAGCCTCCACAGCGCCTCCTCACCTTCATCCGCGACGTGGGCAGTCACCACGATGACCTGGATATCCTGGACTACTGTGTTGAAGCCGTTGACTTCCGCACACACCAGTTCCAGTCTCTGGCCCGGTTCACTGGCCAAGATTACGACTGCTCACTCGAAGACAGCCCATTCACCGTCCACGCTTCTTGCGATGGTCTCCTGCTCATGTCCTACAACAACTATTTGCATCTCTGCAACCCCACTACACGTCAATGGCTTTGGGTCTCCCCCCCGGCGCTTCAACATGACAAGGTCGTGGGGCTCTATGCACATGGACATCCTTCCGAATACCGAGTATTGTACTATCGAGAATTTGGTTTGGGACGTACATTCTACATCACCACTGTTGGCTCCAGGAAGGAGAGGCGCATTTGGCCACATTCATCATCAGAATCCCTGAGAAAGTGGTTGACAAAAGGGACAGAGGATACTGAATTCAACAAGCCTTTCCTGTTTCATGGAAACCTGCACTGGTTGCCACAGTCAGGTCGACAAAACAAGATAGTGGTGTTCGATACACTGGATGAGGCGTTTCGGTGGTTGCATGTACCTTTCAAGATGCACAATGTGTCCTCATTACTCGAGATTGAGGGTAGCCTTGCCATGTCAAACAGCCATATTGGATCATCAAAGGTGGATCTTTGGCTTCTGCAAGATTATAAGCATATGGTATGGGTCCACAAGTATCGGATTGAATTGCCAGTGATAGATATTCGCCGTTTAGTAGAAGATGATGTTTGGTTTCTTCATATTGTTTCCCAAGAGGGTGATGTCTTGGTTGATGGATCTTATTGGCAGTTTCACTACGACATGAAGGGTAATTTGCTGGAGAAATTTCAATGTAGTGGCCGCATGCTGAACATTACTCCACATATTCTCCAAGAAAGTCTCGTTCCACACGAAGTGTTCCAAATTCTAGATAATGAAAGTAGACATGCACCACATTTCTTCAGGGGGTTGTAGAGCATACTTTCTGTACTGAGGCTATTTCACACTTTTGGGCGTCTATTCATTGGATACTGCAATTTTAGCGATGGAACTTAATTTTGTAGTGAATGGTCAATGATCTGTTGTTGCAAAGGGCAGCATTCACTCTGATCAGTATTTCTGTACCTCCACATGTTCATCTTTAACATCGAGGGTATCATTTCAGTACTGTACGTGGAAAATTTAAATGCCTGAGACTGTTTTTTCCTGGTTTGTGGAAGTCTGAGACTGAACAGTTGATTATGCTCGTTGTTTATTTCAACATCGCAAGATGGTTACTTCCTTCGTTTCACAATGTAAGCCATTCTAGTATTTCTCACATTCATATTGATGTTAATAAATCTAAATAGATATATATGTCTAGATTTATTAACATCAGTATGAAAGTGAAAAATACTAAAATGACTTGCATTGTGAAACGGAGGGAGTACTTTTTATTGGCTTCTTGCAACTTAATTTTGCCACTCTGGTATTGAAAGGTCATTGTCTACTTGTGTTGGTGATGCGTATGTCTGATGAGATCCTTAGTGCCATTTATTTTGAGTTTGTTGTGTCTTGCTGGAATTGTTGGGTTACATTCCCTGTTTGAACAGTGACTCTGGAATTGTTGGGTTACATTCCCAGTTTCAACAGTGACTAGTCATGAACTGGATATCCTAGTCGGTAAGGAGGTCTTATAGTGACTCAACTTGAATTTATGACTGCACCTTCACTGGGCTGCTGGAATTTCCTCAACCTTTGTGCTTGTTGCAGGAACCGAATTACCAGATTGATGTTATCTACGGAGTGATGGAATCCAAGTATCCAACAGGAACAGGTCCTATTACCATCAGGACCCAGAATTGTAACATGCATAGTAAACACGAAACAGGAGAGGAGGCAGTATAGTCAAGCAGTATAATTATATTCTTGAGATTGATTAATTATCGGCAACTAGCTGGCTTAATTACTTGCACTCATCCAAGTCCATACAAAAGATATACAGTACCATTTCGGCTTTTTAGCCCATCATTCGCTTCAACTCAACCGGCAACTGGGCTTAATTTACGGCCCAAAGACTGGTCCAATCAAAAGTGAACTATGACGAATGGGAATAAGTATATTTCTCATCCCTCATCTCTTGCCCCTGGTCGAATCGCCTCCCTCAATAGCAAAACCGGGTATAATGACTCCCTCATCTTTGAAAACCGGTGCAAATAGACTCTTTTGGTTTTAGAAGCGGTTTTATCCTACGTGGCACTTGTGGGCCCCACATATCGGTGAAAAAATTAAAAAATAAACAACCCCACATGTCAGTCATCCTAATCTCAACCTTTTTTTTTTCTCACCACTCTCTCTTTCCTGTTCTCTCTCTTGTCGGTGGAGAAGAAGCTCGACTACTACAGCGGAGAGGGGCGCCCGCCGCAACAGCAAGAGGGGGGAGGAGGGGCGCGACACAGAGCAAGCAGTTTCCGAGGAGGAGGACGCGAAACCGCGTAAGCACATGGCAGGGGAGGGACCGATGGGTGGGAGGACGCGGTCGCCGCCGCAACGTCCTTCTCTGCTCCTTGGCTCGTCTCCACGGCGTCATTCCGTGCGGGGAGGAGCTCTAATGTGATGGGTTGCTGGTGCTGTGGGGATGACAGGGTGGAGTCTATTTGTGCATAGAGTCTATTTCAAGAAGAAGAACCGGAGGAGGAAGAGGTAGAAGCATGAGAGGGCCGACTTGTTCCACGACGTTATCGCGCCCACACCGCAGCCGATCGCGCATGTGGAGAGGACCTGGGCGGCTACAGCGTGTGCGGAGAAGAGAACACCAACCGGCTGCGTGTAAGGGAAGGAGCCGCCTGCCGTGGCGCGCGTAGACAAAGGAGCTCGCCGACCACTACTCCGCCGGCAAATAGAGAACAGGAGAGGTGAGGAAAAAAAGGATGAGATGTTTTTTTTTTCATTTTGCTCTCACTGATATGTGGGTCCCATAAGAGCCACGTAGGATAAAACCGCTTGCAAAACCATTGAAGGAGTTTATTTGCACTGGTTTTCAAAAATAAGGGAGATGTTATACCCGGCTTTACGATTAAGGGAGACGATTCAACAAAGGGTAAGAGATGAGGGAGGTAAATAGGCTTATTCCATGACGAATGCTTCTCTCCCCGTAGCAGCCCAGGTGCACATGGGCCCAGCAACCGCAGCCGCGGAGGCAGCACTCGCCCGCCGCGCCGCCGACCCGCTGCCCGCGCTCCGCCGCCGCGACGCGCTCCCGCTCCCGGCGCGCCTCTTCGCGCAGCTCCACGCTCTCGTCCTCACCGCCGGCCTCGCGTGCCACTCCCCCAACTTCTCCCTCCTCCTCCGCCTCGCCTCCCCTCTCCTCCCCGTCTCCCACCGCCTCCGCCTCCTCCTCTCCTCCCCGCTCCCGCCCACCACCTTCCTCGCCAACTCCCTCCTCCTCGCCTCCTCCTCCTCCCGCTGCCTCCCCTCCGCGCTCTCCCTCTACGCCCTCCTCTTCCTCTCCTCCTCGCCGCCGCTCCTCCGCCCCAACGCCTTCACCTACCCGCCGCTGTTCCGCGCCGCGCCTCCGGCCCTCGCCCTCGCGCTCGCCACCCATTCGGTCAAATTCCTCGGCGCCCATGCTGCCTCCTGCGACCGCGTCCTCGGTGCCGCGCTGCTCGGCGTCTTCGCGCGCTGCGGCAGGATCGCCTCATGCCGCCGGGTGTTCGACCGGATCGCGCACCCCGACCTGCCGGCCTGGAACGCGCTGCTCTCCGCCTACGCGCGTCTTTGTGCCAGGGACGTGGCCTGCGCCACCTCTGCGGCGGATGCAATCCTCGAGCTGTTTGTGCGGATGCTATCCTTAGCCATTGAACCCAACGAGATCACGCTCGTCGCCGTCATCGGCGCGTGCGGCGAGCTTGGCGCTGTCAGCCACGGGGTGTGGGCGCACACCTATGCCGTGAAGCGCCGGCTCGCCGTCAACTGCATCGTGGCCACGGCGCTTGTGGAGATGTATGCCGGGTGCGGGAGGCTGGACCTGGCCGAGCAGGTCTTTGCAGCCGTTTCGGACAGGGACACGCGCTGCTACAATGCGATGCTCCATGGCTTGGCAGTCCATGGCCATGGCCGTGCTGCCCTCTCCCTGTTGGACAGAATGCACGGTGCGGGCGTGCCGGTGGATGGCGTCACTGTGCTATCCGTGATGTGTGCTTGTGCCCATGCTGGATTGGTGGATGAAGGTCTGGACTACTTCGACAGAATGGAGATCGAATTCGGGATTGAGCCAAGGATTGAGCATTACGGATGCATGATTGACATGCTGAGCCGGGCTGGTCAACTTAACAATGCCGAGAAGCTGATCCACGAAATGCTCATCGTGCCAAATGCCGCGATATACAGGTCTCTGATCCGGGCCTGTGGCATTCATGGCAAGCTGGAGCTCGGTGAGAAGATGATCGCAGAATTGATGCGACTTGAACCGGATGACAGTGGAAACCATGTCCTGATTTCAAACTTCTATGCGAGAACGAACCGATGGGAGGACGCCAAGAAGGCGAGGAAGGAGATGAAGTCCATGGGCATTGACAAGAACCCTGGATCAAGCCTTGTAGACATCAATGGAGTTCTCCATGAGTTCTTGGTGGGTGACAAGACACACCCTGCCTCAAAGGAGATATACACCATGGTTGAGGAGATAGAAACCAGGTTAATCGAGTGCGGACGCCGGTCGAGCACCTCGTCTGCGTTGTTTGATGTCGAGGAGGAGGACAAGGCGGATACACTGTCCTACCACAGCGAGAGGCTCGCCATTGCCTTTGCTCTGATCGCTTCCAATCCAGGAGCTCCCATTAGGATCATCAAGAATCTCCGGGTGTGTGCCGATTGCCATGAGAGCGCAAAGCTTGTATCTCGGGTGTATGGTAGAGAGATTGTCATGAGGGACCGTACCCGGTTCCATCACTTCAGAGACGGGGTGTGTTCTTGTGGAGATTTCTGGTAAATACTCGTTGTGTTGTATTGTACATTATACAGTGTAATGTGCTGTAGATTTCTCTCATAATTCTGTGGTAATGGGATGTGCTGTACTGGTCTCACACATTTGCTCGAGATCACAGGCTGTGTTTAGTTCCACGCTAAAATTGGAAGTTTGAATAAATTAGAACGATGTGACAGAAAAGTTGGAAGTTTGAAGAAAAAAGTTGAAATCTAAATAGGGCCACAATTCATTCGGTTGTAGTTCGCATGGTTCAATATCAGTTTTTTTTTTACAATCATTTTATTGATGACGGATCAAGTGTTACATGGCAAGTGGTCAAAGAACTGAAATGAAATTCCGAAACTTGGCCGTCGTAGTTCAATATCAGTTGTCAGAATTCAAACAGTTGTAGTTTGTTATAACTTGCGCAATTCGTGCATATGTGGCTAGATAGTTCATATGAAAAAGAATTATTTCTGGGCATATGTGGTCTATTCTTTCTCTAGATAGTTCGTATGAAAAGGAAGGAAAAAGTATGAATTACCCCCCTCCCCGAACTATGACGGTCGTCCGAATTACCCCCCGAACCACAAAACCGGACATTCTTCACCATCAACTATGCAAACCGGGCGAATTACCCCCCTCGACCCAATCCGCGATGGTTTTAGTCTACGTAGCGTACGCGTGGCAGTCCAGTCAGCATTTTATTTATTAAAAAAATATAGAACCCACCTGTCATACTCCTATTACACTATTCCTTTCTCTCTCTCCTCTCACTCTCAACATCTCTCTCACTCTTCCCCTCTCTCTCTCCTTTCACTGTGAACTATGCAAGCGGCGGGCGGAGGAGGCGAGGCGAGGCGAGGCGTGGCGGCGGCGGCGGCCAGGTGAGCGCGGCGGCGGGCGGACGCAGAGCTAGTGGCCGTGCCACCGGCGGTGATGGGTGGACGCGGAGGCGGACTAGGCGGCCGGCGGCGGAGGCGAGGCGCCCGGGCGGCTGGTGGCGGAGGCGGCGGACCTGGCGGCCGGTGGCGGAGGAGAAGGCGGACCTGGCGGCCGGCGGCGGAGGCGCCCTAGCGGAGCTCGCTCGAACGGTCGATGACGGAGGCGGAGGCGGAGGCGGAGCATGCGTCCGATGGCGAAAGAGAAGGGGGAGCGAGCGGCCGCCATCCCGCCGTCCCAAGCTCCGTCCGCGGGGAGGAGGCGAGCGCGGTCGGCGTGGGCGGTTGGCGAGGTGAGGACGGTAGCGCGCGGGGGGCGAAGGACGGCGGCGGCTGGCGACGGAGGCGGAGGCAGACCGGGCGCGCGGTGGGCGGCAGCGCGCGGGAACGCGCGGTGGGCCGCCGCCGCCACCGCGGGCTCCTCCTCTTCGTCGTCGGCGCGCGGTGGGCTCACTGCCGACCGGAGTAGCGCCCGCCGCCGCTCGCCCCGCCGCTCGTCTTCAACCTCCTCCTTGCCCATAGGTGGGAGCTGGCCCCGTCCAATCTCCCTCTCATCCTACCCCCAATGGCGACGCCGCCGCACCATCTCCTCCAACTCCGACCATCCACTCCCTCCCGGCCCTTCTCCACCTCCGCCTTGCCTACAGCAGTGGCAACCGACTGTAGAGAGTGTGCGTCGACCGCCCGCCCCCCGCCCCCGCAGGCCCGCCGCCGTGCGCCGTCGTGCGCGCCGACCGCCCGTCCCCTGTCCCCGCTGGCCCACCGTCGCGGGCCGCCGCGAGGGATTGCGGCCGACCGCCTGCCCTCGCACGCACGCCGCCGTGTGCCGCCCGCCGCTCCACTTGTGCCCGTGCGTCGTGACGATGATGATGAGAGAGAGAGGGGAAGATGGGAAGATGAGTCTTACAGGTGGGCCCCACCATATTTAAAAAAGAAAATGCTGATTGGATTTCAACCTCAGTGCCACGTGAATGCCACGAAAGATTCATACCGCTTCAGATTGAGTGAGGGGGGTAATTTGTTCGGTTTCAATAGTTTGAGGTTTAATATGTCTGGTTTTGTGGTTCGAGGAGGTAATTCGGACGAACCGCGATAGTTTAGGGGTAATTCGTACCTTTTCCGAAATTGAATGATTTTGTCAAATAAACGTGAACTGGTTAAATAGGCGAGCACAGGCAGCTAAGACAGCAAGTCTGGGTGGTGTAGTTGGTTATCACGTTAGTCTCACACACTAAAGGTCCCCAGTTCGAACCTGGGCTCAGACACAAGCATGTTTTTTTCCATTTTTTTTCAACAATTTGAATATTTTTCTTAATAACAACAGCATAATTACATGCAAAAAATATTTCTCCATAACAATGACCATTTTTTTTCAACAATTTGAATATTTTTCTTAATAAAAACAGCATAATTACATGCAAAAAATATTTCTCCATAACAATAACATAAAAACTTGATAGCCACATGCACATGATTTTTTTTTCAAAAATTCGAATATTTCTCAATAACAACAGCATAATTACATGCAAAAAATATTTAATATTTCTCCATAACAATAACATAAACACTTGATAACCACATGCACATGATTTTTTTTTCAAAAATTCGAATATTTCTCAATAACAACAGCATACTTACATGCAAAAAATATTTCTCCATAACAATAACATAAACACATGCACATGCACATGCACATGATCTTTCTTTTATTTTAAAAAATTCAAATATTTCTCAATAACAACAGCATAACCACATGCACATGATCTTTTTTTTAAAAAAAAATAACCCTCCATATCATCGAGCAACTTTAACAGCATAACCTTTTCTTTTTCAAATATTTCCTCCATACCAACAGCATAACCACATCCACATGATATATTTTTTTTTCAAAAAAAAAAATCTTCATATCATCAAGCAGCAGTATAAGCTGCAAAACCATATGCACATGAAGTCAAATATTTCCTATACGACCTATATAGCATCTTAGCAGCACAACCATTTGCAGTAATGCAGATGATCTCATTCAGAGAGTTAACAGGGTTTAGTGCTACAGCTTCACATCCATATGATCTCATCCACTAAGTTAACAGAGCTTTAATTCTACCACAGCAACTAGCAAAAGATATAGTAATTGCATTGGTGGCTACAGGCCTACGACATCGGCAATGTACAGCACAAAATGTGA
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| CDS seq | ATGGCAATGGCGGAGACGGTGAGGCTGCCCGAACAGCAGCGTCGCAGGCCTCTCACCATTGCCAGCCTCCCTGAAGAAATTATGTCGGAGATTCTGCTCCTGCTGCCGCCAAAATCCATCCTCCAGTGCCGTGCCGTCTGCAAGGCCTGGCGGGACGTCACCTCCGACCGCGCCTTCCTCCTCACCCACCACCGCCGCCAGCCTCCACAGCGCCTCCTCACCTTCATCCGCGACGTGGGCAGTCACCACGATGACCTGGATATCCTGGACTACTGTGTTGAAGCCGTTGACTTCCGCACACACCAGTTCCAGTCTCTGGCCCGGTTCACTGGCCAAGATTACGACTGCTCACTCGAAGACAGCCCATTCACCGTCCACGCTTCTTGCGATGGTCTCCTGCTCATGTCCTACAACAACTATTTGCATCTCTGCAACCCCACTACACGTCAATGGCTTTGGGTCTCCCCCCCGGCGCTTCAACATGACAAGGTCGTGGGGCTCTATGCACATGGACATCCTTCCGAATACCGAGTATTGTACTATCGAGAATTTGGTTTGGGACGTACATTCTACATCACCACTGTTGGCTCCAGGAAGGAGAGGCGCATTTGGCCACATTCATCATCAGAATCCCTGAGAAAGTGGTTGACAAAAGGGACAGAGGATACTGAATTCAACAAGCCTTTCCTGTTTCATGGAAACCTGCACTGGTTGCCACAGTCAGGTCGACAAAACAAGATAGTGGTGTTCGATACACTGGATGAGGCGTTTCGGTGGTTGCATGTACCTTTCAAGATGCACAATGTGTCCTCATTACTCGAGATTGAGGGTAGCCTTGCCATGTCAAACAGCCATATTGGATCATCAAAGGTGGATCTTTGGCTTCTGCAAGATTATAAGCATATGGAACCGAATTACCAGATTGATGTTATCTACGGAGTGATGGAATCCAAGTATCCAACAGGAACAGGTCCTATTACCATCAGGACCCAGAATTCACTCGCCCGCCGCGCCGCCGACCCGCTGCCCGCGCTCCGCCGCCGCGACGCGCTCCCGCTCCCGGCGCGCCTCTTCGCGCAGCTCCACGCTCTCGTCCTCACCGCCGGCCTCGCGTGCCACTCCCCCAACTTCTCCCTCCTCCTCCGCCTCGCCTCCCCTCTCCTCCCCGTCTCCCACCGCCTCCGCCTCCTCCTCTCCTCCCCGCTCCCGCCCACCACCTTCCTCGCCAACTCCCTCCTCCTCGCCTCCTCCTCCTCCCGCTGCCTCCCCTCCGCGCTCTCCCTCTACGCCCTCCTCTTCCTCTCCTCCTCGCCGCCGCTCCTCCGCCCCAACGCCTTCACCTACCCGCCGCTGTTCCGCGCCGCGCCTCCGGCCCTCGCCCTCGCGCTCGCCACCCATTCGGTCAAATTCCTCGGCGCCCATGCTGCCTCCTGCGACCGCGTCCTCGGTGCCGCGCTGCTCGGCGTCTTCGCGCGCTGCGGCAGGATCGCCTCATGCCGCCGGGTGTTCGACCGGATCGCGCACCCCGACCTGCCGGCCTGGAACGCGCTGCTCTCCGCCTACGCGCGTCTTTGTGCCAGGGACGTGGCCTGCGCCACCTCTGCGGCGGATGCAATCCTCGAGCTGTTTGTGCGGATGCTATCCTTAGCCATTGAACCCAACGAGATCACGCTCGTCGCCGTCATCGGCGCGTGCGGCGAGCTTGGCGCTGTCAGCCACGGGGTGTGGGCGCACACCTATGCCGTGAAGCGCCGGCTCGCCGTCAACTGCATCGTGGCCACGGCGCTTGTGGAGATGTATGCCGGGTGCGGGAGGCTGGACCTGGCCGAGCAGGTCTTTGCAGCCGTTTCGGACAGGGACACGCGCTGCTACAATGCGATGCTCCATGGCTTGGCAGTCCATGGCCATGGCCGTGCTGCCCTCTCCCTGTTGGACAGAATGCACGGTGCGGGCGTGCCGGTGGATGGCGTCACTGTGCTATCCGTGATGTGTGCTTGTGCCCATGCTGGATTGGTGGATGAAGGTCTGGACTACTTCGACAGAATGGAGATCGAATTCGGGATTGAGCCAAGGATTGAGCATTACGGATGCATGATTGACATGCTGAGCCGGGCTGGTCAACTTAACAATGCCGAGAAGCTGATCCACGAAATGCTCATCGTGCCAAATGCCGCGATATACAGGTCTCTGATCCGGGCCTGTGGCATTCATGGCAAGCTGGAGCTCGGTGAGAAGATGATCGCAGAATTGATGCGACTTGAACCGGATGACAGTGGAAACCATGTCCTGATTTCAAACTTCTATGCGAGAACGAACCGATGGGAGGACGCCAAGAAGGCGAGGAAGGAGATGAAGTCCATGGGCATTGACAAGAACCCTGGATCAAGCCTTGTAGACATCAATGGAGTTCTCCATGAGTTCTTGGCCTACGACATCGGCAATGTACAGCACAAAATGTGA
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| Protein seq | MAMAETVRLPEQQRRRPLTIASLPEEIMSEILLLLPPKSILQCRAVCKAWRDVTSDRAFLLTHHRRQPPQRLLTFIRDVGSHHDDLDILDYCVEAVDFRTHQFQSLARFTGQDYDCSLEDSPFTVHASCDGLLLMSYNNYLHLCNPTTRQWLWVSPPALQHDKVVGLYAHGHPSEYRVLYYREFGLGRTFYITTVGSRKERRIWPHSSSESLRKWLTKGTEDTEFNKPFLFHGNLHWLPQSGRQNKIVVFDTLDEAFRWLHVPFKMHNVSSLLEIEGSLAMSNSHIGSSKVDLWLLQDYKHMEPNYQIDVIYGVMESKYPTGTGPITIRTQNSLARRAADPLPALRRRDALPLPARLFAQLHALVLTAGLACHSPNFSLLLRLASPLLPVSHRLRLLLSSPLPPTTFLANSLLLASSSSRCLPSALSLYALLFLSSSPPLLRPNAFTYPPLFRAAPPALALALATHSVKFLGAHAASCDRVLGAALLGVFARCGRIASCRRVFDRIAHPDLPAWNALLSAYARLCARDVACATSAADAILELFVRMLSLAIEPNEITLVAVIGACGELGAVSHGVWAHTYAVKRRLAVNCIVATALVEMYAGCGRLDLAEQVFAAVSDRDTRCYNAMLHGLAVHGHGRAALSLLDRMHGAGVPVDGVTVLSVMCACAHAGLVDEGLDYFDRMEIEFGIEPRIEHYGCMIDMLSRAGQLNNAEKLIHEMLIVPNAAIYRSLIRACGIHGKLELGEKMIAELMRLEPDDSGNHVLISNFYARTNRWEDAKKARKEMKSMGIDKNPGSSLVDINGVLHEFLAYDIGNVQHKM |
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| Function | Pentatricopeptide repeat-containing protein At5g43790 [UniProtKB/Swiss-Prot:Q9FG85] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_12g0002000 | OsIR64_12g0002000.01 | Chr12 | 1371398 | 1380444 | + | NAM | ||
| CDS seq | ATGGCAATGGCGGAGACGGTGAGGCTGCCCGAACAGCAGCGTCGCAGGCCTCTCACCATTGCCAGCCTCCCTGAAGAAATTATGTCGGAGATTCTGCTCCTGCTGCCGCCAAAATCCATCCTCCAGTGCCGTGCCGTCTGCAAGGCCTGGCGGGACGTCACCTCCGACCGCGCCTTCCTCCTCACCCACCACCGCCGCCAGCCTCCACAGCGCCTCCTCACCTTCATCCGCGACGTGGGCAGTCACCACGATGACCTGGATATCCTGGACTACTGTGTTGAAGCCGTTGACTTCCGCACACACCAGTTCCAGTCTCTGGCCCGGTTCACTGGCCAAGATTACGACTGCTCACTCGAAGACAGCCCATTCACCGTCCACGCTTCTTGCGATGGTCTCCTGCTCATGTCCTACAACAACTATTTGCATCTCTGCAACCCCACTACACGTCAATGGCTTTGGGTCTCCCCCCCGGCGCTTCAACATGACAAGGTCGTGGGGCTCTATGCACATGGACATCCTTCCGAATACCGAGTATTGTACTATCGAGAATTTGGTTTGGGACGTACATTCTACATCACCACTGTTGGCTCCAGGAAGGAGAGGCGCATTTGGCCACATTCATCATCAGAATCCCTGAGAAAGTGGTTGACAAAAGGGACAGAGGATACTGAATTCAACAAGCCTTTCCTGTTTCATGGAAACCTGCACTGGTTGCCACAGTCAGGTCGACAAAACAAGATAGTGGTGTTCGATACACTGGATGAGGCGTTTCGGTGGTTGCATGTACCTTTCAAGATGCACAATGTGTCCTCATTACTCGAGATTGAGGGTAGCCTTGCCATGTCAAACAGCCATATTGGATCATCAAAGGTGGATCTTTGGCTTCTGCAAGATTATAAGCATATGGAACCGAATTACCAGATTGATGTTATCTACGGAGTGATGGAATCCAAGTATCCAACAGGAACAGGTCCTATTACCATCAGGACCCAGAATTCACTCGCCCGCCGCGCCGCCGACCCGCTGCCCGCGCTCCGCCGCCGCGACGCGCTCCCGCTCCCGGCGCGCCTCTTCGCGCAGCTCCACGCTCTCGTCCTCACCGCCGGCCTCGCGTGCCACTCCCCCAACTTCTCCCTCCTCCTCCGCCTCGCCTCCCCTCTCCTCCCCGTCTCCCACCGCCTCCGCCTCCTCCTCTCCTCCCCGCTCCCGCCCACCACCTTCCTCGCCAACTCCCTCCTCCTCGCCTCCTCCTCCTCCCGCTGCCTCCCCTCCGCGCTCTCCCTCTACGCCCTCCTCTTCCTCTCCTCCTCGCCGCCGCTCCTCCGCCCCAACGCCTTCACCTACCCGCCGCTGTTCCGCGCCGCGCCTCCGGCCCTCGCCCTCGCGCTCGCCACCCATTCGGTCAAATTCCTCGGCGCCCATGCTGCCTCCTGCGACCGCGTCCTCGGTGCCGCGCTGCTCGGCGTCTTCGCGCGCTGCGGCAGGATCGCCTCATGCCGCCGGGTGTTCGACCGGATCGCGCACCCCGACCTGCCGGCCTGGAACGCGCTGCTCTCCGCCTACGCGCGTCTTTGTGCCAGGGACGTGGCCTGCGCCACCTCTGCGGCGGATGCAATCCTCGAGCTGTTTGTGCGGATGCTATCCTTAGCCATTGAACCCAACGAGATCACGCTCGTCGCCGTCATCGGCGCGTGCGGCGAGCTTGGCGCTGTCAGCCACGGGGTGTGGGCGCACACCTATGCCGTGAAGCGCCGGCTCGCCGTCAACTGCATCGTGGCCACGGCGCTTGTGGAGATGTATGCCGGGTGCGGGAGGCTGGACCTGGCCGAGCAGGTCTTTGCAGCCGTTTCGGACAGGGACACGCGCTGCTACAATGCGATGCTCCATGGCTTGGCAGTCCATGGCCATGGCCGTGCTGCCCTCTCCCTGTTGGACAGAATGCACGGTGCGGGCGTGCCGGTGGATGGCGTCACTGTGCTATCCGTGATGTGTGCTTGTGCCCATGCTGGATTGGTGGATGAAGGTCTGGACTACTTCGACAGAATGGAGATCGAATTCGGGATTGAGCCAAGGATTGAGCATTACGGATGCATGATTGACATGCTGAGCCGGGCTGGTCAACTTAACAATGCCGAGAAGCTGATCCACGAAATGCTCATCGTGCCAAATGCCGCGATATACAGGTCTCTGATCCGGGCCTGTGGCATTCATGGCAAGCTGGAGCTCGGTGAGAAGATGATCGCAGAATTGATGCGACTTGAACCGGATGACAGTGGAAACCATGTCCTGATTTCAAACTTCTATGCGAGAACGAACCGATGGGAGGACGCCAAGAAGGCGAGGAAGGAGATGAAGTCCATGGGCATTGACAAGAACCCTGGATCAAGCCTTGTAGACATCAATGGAGTTCTCCATGAGTTCTTGGCCTACGACATCGGCAATGTACAGCACAAAATGTGA
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| Protein seq | MAMAETVRLPEQQRRRPLTIASLPEEIMSEILLLLPPKSILQCRAVCKAWRDVTSDRAFLLTHHRRQPPQRLLTFIRDVGSHHDDLDILDYCVEAVDFRTHQFQSLARFTGQDYDCSLEDSPFTVHASCDGLLLMSYNNYLHLCNPTTRQWLWVSPPALQHDKVVGLYAHGHPSEYRVLYYREFGLGRTFYITTVGSRKERRIWPHSSSESLRKWLTKGTEDTEFNKPFLFHGNLHWLPQSGRQNKIVVFDTLDEAFRWLHVPFKMHNVSSLLEIEGSLAMSNSHIGSSKVDLWLLQDYKHMEPNYQIDVIYGVMESKYPTGTGPITIRTQNSLARRAADPLPALRRRDALPLPARLFAQLHALVLTAGLACHSPNFSLLLRLASPLLPVSHRLRLLLSSPLPPTTFLANSLLLASSSSRCLPSALSLYALLFLSSSPPLLRPNAFTYPPLFRAAPPALALALATHSVKFLGAHAASCDRVLGAALLGVFARCGRIASCRRVFDRIAHPDLPAWNALLSAYARLCARDVACATSAADAILELFVRMLSLAIEPNEITLVAVIGACGELGAVSHGVWAHTYAVKRRLAVNCIVATALVEMYAGCGRLDLAEQVFAAVSDRDTRCYNAMLHGLAVHGHGRAALSLLDRMHGAGVPVDGVTVLSVMCACAHAGLVDEGLDYFDRMEIEFGIEPRIEHYGCMIDMLSRAGQLNNAEKLIHEMLIVPNAAIYRSLIRACGIHGKLELGEKMIAELMRLEPDDSGNHVLISNFYARTNRWEDAKKARKEMKSMGIDKNPGSSLVDINGVLHEFLAYDIGNVQHKM
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.036211 | 0.060029 | 0.046125 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0128000 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g03450 | RBH | 0.082141 | 0.0 | 0.076421 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0128000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0002050 | SBH | 0.0 | 0.000000 | 0.408112 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0002100 | SBH | 0.000000 | 0.000000 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0002080 | SBH | 0.0 | 0.0 | 0.852120 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0002040 | SBH | 0.081266 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0002010 | RBH | 0.000000 | 0.0 | 0.423188 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0024600 | RBH | 0.115363 | 0.9415545 | 0.07635 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0002020 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0025800 | RBH | 0.2266125 | 0.9408245 | 1.2063135 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0001860 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0002040 | RBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0002030 | RBH | 0.740573 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0001990 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0002080 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G002030 | SBH | 0.000000 | 0.0 | 0.330272 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0001370 | RBH | 0.096488 | 2.690980 | 0.267159 |
