Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_10g0005730 | OGI:10024500 | 4/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr10:8387891-8389991 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGAGATTGAGGGTGCATCAGCGGTAGATGAGAAGATGGTGCGTACCGTTGGAGAAGGTGGTGTTGATCTGTCATTCTGCAACAATGGCAACTCAGGCAGTCCTGATGATGAGGGAATCGCGGAGGAGAAGAGGATTGAGATAGAGTTACCGGTGCACGGGAGCGAATCATTAGGGGATGCCAATGTGTGTTCTTAGGTTGCAAGAGGAGATCGCCGACCGGAGTTTGGGCGTGAATCAAGGGGGTCGCGCGGTGTCCGGCGAGGAGGTGCCAATCACGGAGATGGCGTGATTCGCTTGGGCCTCGGGGAGTGCCGACAGTTGCAGACCAGTGAGGCCTTTTGTGGCAGTGACCCCGGTGAGGCACAAAGTGCCAGCAGGCTAGCGCCACCACCGGTGGCTCATGACCCATGGCAAGGAGGTAGGAGGCGCAGCTTCATTCGTAGTGTGCCGGCAGCTTCGGATCCGTAGGTGCGAGGCCGGAGGTGCAATGGCGTACATAGCGCAATGAGGAGTTGGGGCTCGATGGGTTGGGATGGGTAATCGATCGGTGATTTCATGTTAGCACTGTAAGACAGAAGACACCCTCATCCTTTTTCAGCCGTTAGATAAATAGATGGGATTGCTGAGGAATGGGATGATGATGTTTTGTGTATATTTCTCTGGGTTAACCTAGCAAAAGTACAACTGCTGCTTTTTATATTAGAATAAAGTGCTCGTGCGTTGCAAAGGAAAAAACTAATGTTATAATAATGATTATGGTAATTTTATACTTTCATGGGAATTATATGGGATACTCCCAGACATAAACAGTGTATCAAATCTATACCTAATTCTAATTCAATATCATGACAAATAAATAATTACATTTTTTGTTGACTCCATTTAGCTAGAAATAATTTAGTATGAAGAATGAAAAACTATATTAAATCTCACCAATTTTTAATGGCTCGAAATGGAGCTTAAACTAAGTTTGTTAATGGAGAAATAGTTTAAATCGGCTAAGAAAAAATAAAACATAATTAGACCTATAATTAGAAGGATGCCTATCTCTCTTTCACACCGTGGCATGTTAAGTGCACAGGGCCCATGTGCAAGGCCACGGTTCAAGTCGGCGTAGGTGTGCTGAGAGCCGTCGGATTTGATCGAACGGTTAGGATCACTCGTGATTTACTAAAACATTGCCCTATTTAAACCCTAACCATAGATTCATTCCCCTTCTCTCCCTCCGCGAGCGACGGCGCACAACCCCTCCGCGAGCGACGGCGATGGCGCCCTTCCCCACCGCGAGCAGCAGTGGCACCCTCCCCCACTGCAAGCGACAGCGGCCACGGTGCCCTCCCTCAGCATGAGCAGTGGCGATGGCGGTGACGGCATCCTCCCGCAGCTTCCACTGGTGGATCAGGCGGCGTCGGTGGCTTCCCGCGGGCGGATCCGATGGGCACAGTGGTGTCGGCGGCTTCCGCGGGCAGATCAGGCGACAATGAAGATTAAGATAAGATTTGTGCATTTATTATTATTATTCTTGTTTTTCTCTTTTTTATTGTCCGATTGGATTTTGTATCTATGTTTGAATTTGTGATTTATCCATCATACGTGATGTGTTACTCGCGCGTGTGGGAACGGAAGCCATCGTTCGATTGGACTCATCAGACAAAAAAATGATGTGAAGAACGGGAAATTAATTTTTGAAGTAGTTATAAGATATGTTGGTTCAATTCCAGTGTAGATAGGTTAATTAGTCACGGTTTATTAGTAGAGTCATTAGCGGCTAGAGTACCAAAAGTAATTAGTGTTTTCTTGATTAGTCTTTTCCTTGTATGTTTCGAGTCCGAACCAAGTCACAGTCCGGTTTATTTTATATGTGTCGTCAGTAGAGAGGCACAGACGAAAATTGAGTACAGAATCATCTTCAAAATAATAGTAGAGATTAAAACCGATTCAAATACGGATGACGTAGCAAAATTCTGGCGAGAACAAGTTGATACTGCTAAAGTTGGCAGATCTGTTCAAGGGAAATTTCAAGGTATTTGCAAATTACAAGAAAGGTGGTGTTAGAGATCTGGCTGATGAGATTGCTGCTGCAGGACCAAATTTCTGA
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| CDS seq | ATGGAGATTGAGGGTGCATCAGCGGTAGATGAGAAGATGGTGCGTACCGTTGGAGAAGGTGGTGTTGATCTGTCATTCTGCAACAATGGCAACTCAGGCAGTCCTGATGATGAGGGAATCGCGGAGGAGAAGAGGATTGAGATAGAGTTACCGGTGCACGGGAGCGAATCATTAGGGGATGCCAATATTCATTCCCCTTCTCTCCCTCCGCGAGCGACGGCGCACAACCCCTCCGCGAGCGACGGCGATGGCGCCCTTCCCCACCGCGAGCAGCAGTGGCACCCTCCCCCACTGCAAGCGACAGCGGCCACGGTGCCCTCCCTCAGCATGAGCAGTGGCGATGGCGGTGACGGCATCCTCCCGCAGCTTCCACTGGTGGATCAGGCGGCGTCGGTGGCTTCCCGCGGGCGGATCCGATGGGCACAGTGGTATCTGTTCAAGGGAAATTTCAAGGTATTTGCAAATTACAAGAAAGGTGGTGTTAGAGATCTGGCTGATGAGATTGCTGCTGCAGGACCAAATTTCTGA
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| Protein seq | MEIEGASAVDEKMVRTVGEGGVDLSFCNNGNSGSPDDEGIAEEKRIEIELPVHGSESLGDANIHSPSLPPRATAHNPSASDGDGALPHREQQWHPPPLQATAATVPSLSMSSGDGGDGILPQLPLVDQAASVASRGRIRWAQWYLFKGNFKVFANYKKGGVRDLADEIAAAGPNF |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_10g0005730 | OsIR64_10g0005730.01 | Chr10 | 8387891 | 8389991 | + | NAM | ||
| CDS seq | ATGGAGATTGAGGGTGCATCAGCGGTAGATGAGAAGATGGTGCGTACCGTTGGAGAAGGTGGTGTTGATCTGTCATTCTGCAACAATGGCAACTCAGGCAGTCCTGATGATGAGGGAATCGCGGAGGAGAAGAGGATTGAGATAGAGTTACCGGTGCACGGGAGCGAATCATTAGGGGATGCCAATATTCATTCCCCTTCTCTCCCTCCGCGAGCGACGGCGCACAACCCCTCCGCGAGCGACGGCGATGGCGCCCTTCCCCACCGCGAGCAGCAGTGGCACCCTCCCCCACTGCAAGCGACAGCGGCCACGGTGCCCTCCCTCAGCATGAGCAGTGGCGATGGCGGTGACGGCATCCTCCCGCAGCTTCCACTGGTGGATCAGGCGGCGTCGGTGGCTTCCCGCGGGCGGATCCGATGGGCACAGTGGTATCTGTTCAAGGGAAATTTCAAGGTATTTGCAAATTACAAGAAAGGTGGTGTTAGAGATCTGGCTGATGAGATTGCTGCTGCAGGACCAAATTTCTGA
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| Protein seq | MEIEGASAVDEKMVRTVGEGGVDLSFCNNGNSGSPDDEGIAEEKRIEIELPVHGSESLGDANIHSPSLPPRATAHNPSASDGDGALPHREQQWHPPPLQATAATVPSLSMSSGDGGDGILPQLPLVDQAASVASRGRIRWAQWYLFKGNFKVFANYKKGGVRDLADEIAAAGPNF |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0204300 | SBH | 3.331823 | 4.347614 | 4.913024 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g13690 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0204300 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0005690 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0005590 | SBH | 0.000000 | 4.977574 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0005530 | SBH | 0.188256 | 0.686445 | 6.258861 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0005860 | SBH | 0.0 | 0.046133 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0005530 | SBH | 0.0 | 18.946213 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0125300 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0130600 | RBH | 0.0210035 | 0.0131355 | 0.020404 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0005610 | SBH | 0.031632 | 6.861538 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0005660 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0005770 | SBH | 0.000000 | 20.231873 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0005520 | SBH | 0.061314 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0005870 | SBH | 0.147037 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G005710 | SBH | 0.0 | 0.339605 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0005740 | SBH | 0.0 | 0.0 | 0.000000 |
