Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_09g0017080 | OGI:09059560 | 16/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr09:21782728-21783384 | ||||||||
| Gene Symbol | ERF123, OsERF#123, OsERF123, AP2/EREBP#066, AP2/EREBP66 | ||||||||||
| DNA seq | ATGGCCACGGCCACCGGTGGCGTCGTCGCGGCGAAGGCGCGCCGCGGTCGCCGCTTCGTGGGTGTTCGACAGCGGCCGTCGGGGCGGTGGGTCGCCGAGATCAAGGACTCGGCGCAGCGGGTGCGCCTGTGGCTCGGCACGTTCGACACGGCCGAGGAGGCGGCGCGCTCCTACGACGAGGCCGCCCGCGTGCTGCGCGGGGAGCACGCGCGCACCAACTTCGTCGCGCGCGGCGGCGACGCGGCCGCCGCCCCGGCGAGGGCCAGGCTGAGCAGGAACCTGCGGCACGTCATGGCGCGGGCGGCCGCGGGAGGCAGGGCGTCGGCGCCGTGCGCGGCGGCGGGCGTGGGCGCGGGCGGCGAACAGTTCGCGCTCGCCGCGGTGTTCCGGCGCTGCATGCAGCCGGCGGCGGCGACACAGCAGCAGTGCGGCGCCGCCGACACCACCGTGCACGTCAAGAACGCGGTGCAGCCGAGCTTCGTGGTGCCGAGGCGGACGGAAGCGCCGCCGCCGCCGACAACGCCAATGCTTCTAGCCGAGGACGTCTTGGTCGACTTCGACGACGACGGTCTCGGCTCCGCCGGCGTCGAGACGGCGTTCATGGTGTCGTCGTCTCTGATCGTGCCATCCAGCTTCGTCATCGACGACGATTTCTAA
More
|
||||||||||
| CDS seq | ATGGCCACGGCCACCGGTGGCGTCGTCGCGGCGAAGGCGCGCCGCGGTCGCCGCTTCGTGGGTGTTCGACAGCGGCCGTCGGGGCGGTGGGTCGCCGAGATCAAGGACTCGGCGCAGCGGGTGCGCCTGTGGCTCGGCACGTTCGACACGGCCGAGGAGGCGGCGCGCTCCTACGACGAGGCCGCCCGCGTGCTGCGCGGGGAGCACGCGCGCACCAACTTCGTCGCGCGCGGCGGCGACGCGGCCGCCGCCCCGGCGAGGGCCAGGCTGAGCAGGAACCTGCGGCACGTCATGGCGCGGGCGGCCGCGGGAGGCAGGGCGTCGGCGCCGTGCGCGGCGGCGGGCGTGGGCGCGGGCGGCGAACAGTTCGCGCTCGCCGCGGTGTTCCGGCGCTGCATGCAGCCGGCGGCGGCGACACAGCAGCAGTGCGGCGCCGCCGACACCACCGTGCACGTCAAGAACGCGGTGCAGCCGAGCTTCGTGGTGCCGAGGCGGACGGAAGCGCCGCCGCCGCCGACAACGCCAATGCTTCTAGCCGAGGACGTCTTGGTCGACTTCGACGACGACGGTCTCGGCTCCGCCGGCGTCGAGACGGCGTTCATGGTGTCGTCGTCTCTGATCGTGCCATCCAGCTTCGTCATCGACGACGATTTCTAA
More
|
||||||||||
| Protein seq | MATATGGVVAAKARRGRRFVGVRQRPSGRWVAEIKDSAQRVRLWLGTFDTAEEAARSYDEAARVLRGEHARTNFVARGGDAAAAPARARLSRNLRHVMARAAAGGRASAPCAAAGVGAGGEQFALAAVFRRCMQPAAATQQQCGAADTTVHVKNAVQPSFVVPRRTEAPPPPTTPMLLAEDVLVDFDDDGLGSAGVETAFMVSSSLIVPSSFVIDDDF |
||||||||||
| Function | Ethylene-responsive transcription factor ERN1 [UniProtKB/Swiss-Prot:A2Q5W1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_09g0017080 | OsIR64_09g0017080.01 | Chr09 | 21782728 | 21783384 | + | NAM | ||
| CDS seq | ATGGCCACGGCCACCGGTGGCGTCGTCGCGGCGAAGGCGCGCCGCGGTCGCCGCTTCGTGGGTGTTCGACAGCGGCCGTCGGGGCGGTGGGTCGCCGAGATCAAGGACTCGGCGCAGCGGGTGCGCCTGTGGCTCGGCACGTTCGACACGGCCGAGGAGGCGGCGCGCTCCTACGACGAGGCCGCCCGCGTGCTGCGCGGGGAGCACGCGCGCACCAACTTCGTCGCGCGCGGCGGCGACGCGGCCGCCGCCCCGGCGAGGGCCAGGCTGAGCAGGAACCTGCGGCACGTCATGGCGCGGGCGGCCGCGGGAGGCAGGGCGTCGGCGCCGTGCGCGGCGGCGGGCGTGGGCGCGGGCGGCGAACAGTTCGCGCTCGCCGCGGTGTTCCGGCGCTGCATGCAGCCGGCGGCGGCGACACAGCAGCAGTGCGGCGCCGCCGACACCACCGTGCACGTCAAGAACGCGGTGCAGCCGAGCTTCGTGGTGCCGAGGCGGACGGAAGCGCCGCCGCCGCCGACAACGCCAATGCTTCTAGCCGAGGACGTCTTGGTCGACTTCGACGACGACGGTCTCGGCTCCGCCGGCGTCGAGACGGCGTTCATGGTGTCGTCGTCTCTGATCGTGCCATCCAGCTTCGTCATCGACGACGATTTCTAA
More
|
|||||||
| Protein seq | MATATGGVVAAKARRGRRFVGVRQRPSGRWVAEIKDSAQRVRLWLGTFDTAEEAARSYDEAARVLRGEHARTNFVARGGDAAAAPARARLSRNLRHVMARAAAGGRASAPCAAAGVGAGGEQFALAAVFRRCMQPAAATQQQCGAADTTVHVKNAVQPSFVVPRRTEAPPPPTTPMLLAEDVLVDFDDDGLGSAGVETAFMVSSSLIVPSSFVIDDDF
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0434500 | SBH | 34.146652 | 29.531757 | 140.687592 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g26420 | SBH | 18.059254 | 15.378909 | 27.751425 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0434500 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0011390 | SBH | 2.902599 | 624.851746 | 135.521957 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0017110 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0017330 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0017080 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0017230 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0342300 | RBH | 0.0102575 | 0 | 0.0106195 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0023290 | RBH | 0.023462 | 0.493126 | 0.623192 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0255600 | SBH | 85.807949 | 58.874733 | 117.0688055 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0017100 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0016890 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0016930 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0053770 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0016960 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G017360 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0017200 | RBH | 0.0 | 0.0 | 0.0 |
