Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_Ung0053770 | OGI:09059560 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | ChrUN-Ctg416:157788-158444 | ||||||||
| Gene Symbol | ERF123, OsERF#123, OsERF123, AP2/EREBP#066, AP2/EREBP66 | ||||||||||
| DNA seq | atggccacggccaccggtggcgtcgtcgcggcgaaggcgcgccgcggtcgccgcttcgtgggtgttcgacagcggccgtcggggcggtgggtcgccgagatcaaggactcggcgcagcgggtgcgcctgtggctcggcacgttcgacacggccgaggaggcggcgcgctcctacgacgaggccgcccgcgtgctgcgcggggagcacgcgcgcaccaacttcgtcgcgcgcggcggcgacgcggccgccgccccggcgagggccaggctgagcaggaacctgcggcacgtcatggcgcgggcggccgcgggaggcagggcgtcggcgccgtgcgcggcggcgggcgtgggcgcgggcggcgaacagttcgcgctcgccgcggtgttccggcgctgcatgcagccggcggcggcgacacagcagcagtgcggcgccgccgacaccaccgtgcacgtcaagaacgcggtgcagccgagcttcgtggtgccgaggcggacggaagcgccgccgccgccgacaacgccaatgcttctagccgaggacgtcttggtcgacttcgacgacgacggtctcggctccgccggcgtcgagacggcgttcatggtgtcgtcgtctctgatcgtgccatccagcttcgtcatcgacgacgatttctaa
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| CDS seq | atggccacggccaccggtggcgtcgtcgcggcgaaggcgcgccgcggtcgccgcttcgtgggtgttcgacagcggccgtcggggcggtgggtcgccgagatcaaggactcggcgcagcgggtgcgcctgtggctcggcacgttcgacacggccgaggaggcggcgcgctcctacgacgaggccgcccgcgtgctgcgcggggagcacgcgcgcaccaacttcgtcgcgcgcggcggcgacgcggccgccgccccggcgagggccaggctgagcaggaacctgcggcacgtcatggcgcgggcggccgcgggaggcagggcgtcggcgccgtgcgcggcggcgggcgtgggcgcgggcggcgaacagttcgcgctcgccgcggtgttccggcgctgcatgcagccggcggcggcgacacagcagcagtgcggcgccgccgacaccaccgtgcacgtcaagaacgcggtgcagccgagcttcgtggtgccgaggcggacggaagcgccgccgccgccgacaacgccaatgcttctagccgaggacgtcttggtcgacttcgacgacgacggtctcggctccgccggcgtcgagacggcgttcatggtgtcgtcgtctctgatcgtgccatccagcttcgtcatcgacgacgatttctaa
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| Protein seq | MATATGGVVAAKARRGRRFVGVRQRPSGRWVAEIKDSAQRVRLWLGTFDTAEEAARSYDEAARVLRGEHARTNFVARGGDAAAAPARARLSRNLRHVMARAAAGGRASAPCAAAGVGAGGEQFALAAVFRRCMQPAAATQQQCGAADTTVHVKNAVQPSFVVPRRTEAPPPPTTPMLLAEDVLVDFDDDGLGSAGVETAFMVSSSLIVPSSFVIDDDF |
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| Function | Ethylene-responsive transcription factor ERN1 [UniProtKB/Swiss-Prot:A2Q5W1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0053770 | OsLiXu_Ung0053770.01 | ChrUN-Ctg416 | 157788 | 158444 | + | NAM | ||
| CDS seq | atggccacggccaccggtggcgtcgtcgcggcgaaggcgcgccgcggtcgccgcttcgtgggtgttcgacagcggccgtcggggcggtgggtcgccgagatcaaggactcggcgcagcgggtgcgcctgtggctcggcacgttcgacacggccgaggaggcggcgcgctcctacgacgaggccgcccgcgtgctgcgcggggagcacgcgcgcaccaacttcgtcgcgcgcggcggcgacgcggccgccgccccggcgagggccaggctgagcaggaacctgcggcacgtcatggcgcgggcggccgcgggaggcagggcgtcggcgccgtgcgcggcggcgggcgtgggcgcgggcggcgaacagttcgcgctcgccgcggtgttccggcgctgcatgcagccggcggcggcgacacagcagcagtgcggcgccgccgacaccaccgtgcacgtcaagaacgcggtgcagccgagcttcgtggtgccgaggcggacggaagcgccgccgccgccgacaacgccaatgcttctagccgaggacgtcttggtcgacttcgacgacgacggtctcggctccgccggcgtcgagacggcgttcatggtgtcgtcgtctctgatcgtgccatccagcttcgtcatcgacgacgatttctaa
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| Protein seq | MATATGGVVAAKARRGRRFVGVRQRPSGRWVAEIKDSAQRVRLWLGTFDTAEEAARSYDEAARVLRGEHARTNFVARGGDAAAAPARARLSRNLRHVMARAAAGGRASAPCAAAGVGAGGEQFALAAVFRRCMQPAAATQQQCGAADTTVHVKNAVQPSFVVPRRTEAPPPPTTPMLLAEDVLVDFDDDGLGSAGVETAFMVSSSLIVPSSFVIDDDF
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0522200 | SBH | 0.0 | 0.805628 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0522000 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0017110 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0017330 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0017080 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0017230 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0342300 | RBH | 0.0102575 | 0 | 0.0106195 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0017080 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0017100 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0016890 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0016930 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0016830 | SBH | 0.115660 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0016960 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G017360 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0017200 | RBH | 0.0 | 0.0 | 0.0 |
