Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_05g0015200 | OGI:05050890 | 16/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr05:19787220-19795140 | ||||||||
| Gene Symbol | OsNADK3 | ||||||||||
| DNA seq | CTGCCCATCAGTTTGTCGCGTCCGTCCATCCATCCATCCATTGCGGGCCTTCGATCCATCCCCAACCGTGCCACCCATCCTCGCCGACGCTCGCGCAGCCGCACCCGCACAGCGCCGCCGATCGACCCCGTCGCGGATCCGCTCTCCTCGCCGCCGGCGAACCGCCGTCCGCCCCGCCCCGCCCCACCGCAGTGCCCGCGCACGCACTGCCCCCCTCGTGCCGCAGCCCGCAGTCGGCGACGGTCCCTCCTCCGGTGGCGGTGATCTCGTCGCTGGACGTACGGTGCTTCGCTCGACCAGCCACGACAGCGCGGGCCCCGCGTGGCCGCGTCGAGGGTCCTTCCCTCCCTCCCTCATCCACCTCCAGGCTCCCCGTCGCCGCCCGAGGCTATGGATGGCCGGCGCTTGGTTGGTACATCTTCTTTTGCTTTGCTTAATTGCTGCTTGGAGTGGAAGGGAGATTCTTGGGTCGGTGTAGATCACATCATCACTTCCAAATCCCAAATGAGCAGATGGAAGTAGTGTTGTTGTTGGAGATGGTACACTTAAAAAATGCAGTTAAACGTGCCTGCAAAGTTCTCCCGAAATTTTCTGTTTTACCTATAGTATTCATAGTTACAGTGAAGTTTTCACCCAAAAATAAAAAATAAAAATAAAATCAAAACATAAGATTTCAAATTAATATATGTTTTCCTTGTCAGATTTCCTGTTTTCTTAATGGTGTTTTGTATATTTTAGGATTGTTATGGGAGAGTAAACCTTAGTGTGGCTACCTCAGATCAGACCTTAGATAGTTCAATGGAATCAGAGAGGGCAGCTTATGCGTTTCTTCCCCAAACTCCAATCAAGTCAACCGATGCACACCTCGTTGAGTTCTCGGAGGCTATGAGAGGTGATAATACAAACACTTAGGTGTCATTTGAAGCTTTTCACTCTATTATTTAATATACTTGTGCGTGCATGTACCATACTGATGGGCACAACATGACTCACAATTTGCATGTGGAAGCTGTTGCGAAAACATTGCGACAAGTTGCAGAAGGGAAAGCTGCTGCTCAAGCAGAGGCAGCTGAGTGGAAGCGCAAGTATGAATTAGAAAAGGCAGTCAAGGCACACAGGCATAATACTGTAACCAAAGGTCTGATTTACACATTGAAGCTTCAGTTTTACTATTTCTTCATTGCTGTTACCAGACATAAATATGCTAAGAAAGTGGTTGACTCTTAGTTTGATATCATCTTGCTCGAAAAGCTGTCAACAAATAAGAGCATGATCTCCATTTCATTTTCCTAAGATTTATAAATTGCTGATCCCTATCCTGTAATATACCGGTATGCATCTGAGTTTGATGGGCATACATCTAGTTTACATGGGAAGAAATAAATTACTGTGGAATCATTTCTACATGAGTATTGTGCAGTTTACAATTTTGAAATGTTAGATGAAGAGTGGCATGCAACATTTATGCTTCTGAATGCTCCATCACATATAGCCTTCAACACAATTTTTAAGATATTAGAATTTGTGATGATGATGGTGGTGGTTGTCTTCCCACCTCCCCTGAAAAATTGAGTTGGTGTAATCTTTTGTGACAAAGTTTATGCATATGCTGTGGATGATTGAATCATCCACGCGTGTGGTTTGTGCTAAGATCCTGTTTAACATAGAAACTGCACGAATCACTCATGCAGTTTTCATATTTAGAGAATTTCTACCGCACATTCATTTTCTGAGTATGCAACTTGTGATATAGTAGTTTGTTCATCCGAGATCAGTTTCAGTGCACAGGTTATCGGCAGTACTATTTAATATTCAAAATTTGATTCATCATGATCATCATTTTCAGAAAATGAACCAATTCATTACGTGCCTTCCTAGTTCCTATTCTATCACTATGATTTTGTGAGCAAAATGCTCTAGAAACTTGCAAATAGGTCAGTCATGCAATTCTGCGAGCAAGACAATAAATATTAAATATCTCATCTTGGTTCTTGTTCTGTTATTGCCATTAGCACTGAAGTTCTCGTTGAAACCTATCTGAATCTCAAAATGACCTCTATATTAACTGTTTACCACCCAATAAAAGGTATTGGCCACCCTACATTCATTTTGCATCTGTGATCATGGAAATAGTCAACCATCAAGTATTATTTGTTGCTCAGGCAAGGATGTATATATATATGTCCTTGCGTTTGTTACATGGTTTTATGATTATATAAGTTGAGTTTTAATTCCTTCTAATCTTGTATCTTCAAATAAGAAGTCACAAGTGAAGAACTCAGCGGTAATTAACTCCATATAAAATTCTAAACATAGTAAACATATTACATGAGCAACCTTACAAATTACATCAAAGATTGGGTTGGATATACAGTAGTAATATTCTCCAGCTAATTAGCAAATTGATCTTTTTCTCTTACCATGCACATGGATTTCTACAATAAATATGAAGTGTAACATGTGCAGGCTGCAGTAACTGTGACAAGGAAAAGTTAGAGCAGTTGGCTAGTCAGCTGACATTGGAGACCACGTCGGTTGATCCAACAAGTTGCTGCGGAAATCATGAGATCTGTTCACGTCAAATTCTCCAGGACGAATGCCCTGGAACTAATAAAATTTCGCATGACAAGATTGCTGCAAGAAAGGTATCCTTTAGGCAAGAATATCGAATACATTTTTTCTGCAACGGATAGTTACAACCCTGCTAGATGTTTTTTTTTATATAACATGATGTGCTGCTGAAACCAACTCACACCCAGGCTTCCATCCTTCTGTTAATGCCTAGAATAATGAAAGGGAACTGATAAAAATGTATTGAAGGATGAAATAAGTCAAATTGCTGGAAAGAAAATCTGGTCTTGTTCTGTCCGTAGGTTGGTCGTTGTTTTGCTGTAACATATCTGTTTCAGTATGTCTGCCTACTCTGTTATCTTGATCTCATTATTTCCTGAACTTAGTATTGGCAGCTCAACTAATATCAAAAGACAATTGCTTGTATAGCTTGATTCACATATTCAAGACTCAACTAATATGGACGTGGTGAGTACCATCCTTGGTGAGGACTGAGGTTGGTACTTACACTGTAATGGAACCATGTTTGGATGGCCTTTTGTCTCTTTGTATATTATATATTTAGTTCATGAAAAATCTGTGGGCCTTTTTTGAACATTTACGATGCAATGTTGAATTTGCAAAATTAGATATTTTTATATCATTTGCTTGACTTCTTATTCTATATGCACTCAATATCTTCAAGTTGGAGAGAAATTTCTTCATGAGCACAAGTAGTCTATTATGGCGTTTTATTTTATTTTGTTACACCGAAAAGAGGAATATCTTCCAATCATAGCCAATTTATTAAGAAACACCTTTTTTTTGCAGGCACCATTTAAACTTTCATGGGGATGCAATGGGGATAATAATGGTCAGCACAAGCATGATTTTGTATCCTTCGAAAAAGGGGATATAACAACAGCTGAACGCAGCAATAAGCAGGTAGCTATTTGAGGTTTGAGCTATATGATCCATTTTTTAAAAAAATTGTCTTAACTAGTTGGAAATGATTGTTGGATAATTCCATTGCTGCCGTATTTTTTTAATGGCAAAAAATTACCGTGCCTCAGATTTTGCTAAAGTGGGAATCCCCTCCACAAACTGTTCTTTTCGTGACTAAACCTAATTCCAACTCCGTGCACGCTCTCTGTGCTGAAATGGTTAGGTATGTTTTCTTTCTGCTCTGTCTGCCAACATGGTCAGGTATGTCAAAGGTTTTATATTTTATCAATCATCTGAGTTCGGCATTAAAAATAGCTTCTTTTTTGTTTCTGGAACTTGTCCTCTCCTAATTTACTTATGTTAAGCAGATTTTGTTGATAAATAATGTTGCATGGAATTGTATATTTTTCATTCAATATCGTTGTTTCACTTGTGCTAATGTCTGCCGTTCTCCGCAGATGGCTTAAAGAGCACAATAATATAAACATCTTTGTAGAGCCACGAGTTAGCAAGGAACTAGTGACTGAAGATTCATACTTCAACTTTATCCAAACATGGGATAATGGTAATTATTTTTGCCTATATTAGAATCATTAGACTTTGTATCTTGGAACGTCAGGGTGTGAAGAATATCTTGTCACAACCTAGATAACCTGATATCTGATTTATTTTTTTAAATATCAATAATCTGGCACTGAAATAAATGGTTATGGTCACTGTTTATGAGAATGAAAAGCAGTATGCTGTGATAATTTCATAATTTAAGGACTACATTGGTTCATTTAACTCATGGACAACCAATAGACATTCCCCTCTACTTTTAAGTAACCTGCTAAATTTCTTCTCATTGGCCCTTGCAATGAAGTTCTTCTTTCATACCTAATGACCCTTGCAATGAAGTTTTCTTTCATACCTAATGACATGCTGCTGCTGGTGGCTGTGTGTTTGTTAATGTGATAAATTCATTACAGTGGTCTAATATCTACTACGAGAAATGTATCCTTTCCTTTACCATTATACATTAAGTTGGTTAATGTTAATTTCCTTTACCGATAAAATACTAAAAACAAAACAGTCTAGTGTCTCAACTCTCAACAGTTGCTTGAGTTTCTATTAGTGCTTGAATGGATCGTCTATCATTAAATAGCTCCTTTTCTGTTGATGAGTTCTGTCAATAGAGTTCCCTTGCGCTGTCTTTCTCTGTGGTTTAAAATATCCCCATTCCATAATATACTTGTTTTGTTAACCTATGCCCTTAGAAATATGCCCCTTTGTTTTTGGTGTCCAACTTACTGGAAATCTTTGACAGATGAGGAAATGAAGACATTACACACGAAGGTTGATCTCATTGTAACTCTTGGAGGTGATGGAACAGTTTTATGGGTATGTGGTCCAAACTACATGACAATTTACTGAATCTGAATACTGTGTGGTTAATTTTGAAATTTAAGCTATAAATATGAGTTTGGAAATAACTAACACTCTGATGGTATACAAAGAGATGAAATGCCATCCAAGAAATGCTGATGGTCTAATGCATTTTGTCGATGCAAAGTTGAAACTAGTGTCTCACCTACTTGTGGATCCAAGTTTACCACAGTTCATTCACTAGGTTAGGAATTGTTAAAGGTGTTTTTTTTGTGATATATATATGTCAAACAATTTGTAACTTTTTTAAAAAGTTTCCTAACAATGTAGTTTTCTGATAATTCCGGAAAGTCTGTGCAGTTTCAAGAAATTTACTCATTTTCCGGGGCCTATTAGTATAACACCCAAAATTGGAACCAGTAGCATATAAAATGCTGGAAGCTGATTAATTGTCAGATATACATACAGATAAACAGGCTATATGTGTGCAAAGTGATAGACCTAGAATATAGATTATGGAATGCAGTTGATTGGTTGAATAGTGTTATGCACAAGAAGTGTACCACACTAATAAATATTGCTTGGCTGAAAGAAGATTAGTAGCTCCACTTCAAAGTTCAAATTGACAACAGGGATTGTGGGTATCTTTCTTTTTTTGAACGTAATACTTTGCCGCTTTTTTGGGATAGTTAGCAAAGTATAGTTCTGCTGTCAGTAGCATCAAGTTCTTGGAAACGTCTTTTGAGTAAACAGATATTTGAAATGTCCTTTCTAAGATTAATGCATGGACAAACTTTCGTTGCAGTGATCACATAGACCTAGTACCTAGTTATTATGGTTGTTTATAACAAATAATATCATGTTTTTCTTCTATGTGATATTTAAATAACTGCTGTCCTTGTTTTGTTGCTCTCTATGTATCATATTTATGGCTTGTCTCTTTTGTAATGTTCTTGAGCTAGACAATGCGTTAATTATCTCTCAACAGGCAGCATCATTGTTCAAAGGACCAGTTCCCCCTGTTGTTGCGTTCTCTCTTGGATCATTGGGATTCATGACCCCCTTCTGTATCCTTAATCGTTGGTGTTGGAATCTTGGTAATCATGTTGCTAAACTATATGGCAGTTTCGCATGTTACTTATTATACCCAGTCCACAAATGTGTGCCATCTGTCTTTTCACAGTCGCCACTACAACACATTGGATATGACTTCTTTGAAAGAAAATATTACACTAACCAAAATAATAGAACTTATGTATTTTGAAAGTATTTTGCACGAAAAATCCAATGGCATAACTTTATGCACTTGATTAATATACTAGACATTAGAGATCCAAGTTTGAAAAGTGCCCGAGTGCCACACTTCTCTCTCTGTCAATGTGGCATAGGATATGCATGACATATTTGATCAGTCTGCAACTGGTCTTAGCTGGGTGGCCGTGTTTGGTATCAAATGTTCAAAATAATTAAAACTCTCTTGATAGCAAGATCATTTACATATTTCATGCTGGAGCACATTGTCGATTAACAATATCTTTTTGTCCATGGAGCCATGTTGATGCCCTTGACTTAAGCTAAGCAAGTGAGCTGTATCGTGAGTGTTTGGACCATGTGCTGAAAAGGCCATTTGGCATCACACTAAGGAGTCGTCTGCAGTGTCATGTAATCTACGATTCAGCTAAAAATGAAGTTGATACGGAGGAGCCAATTCTAGTGCTGAATGAGGTTACAATTGACCGTGGGATGTCATCGTACCTTACCTACTTAGAATGCTATTGTGACAGTTCTTTTGTCACACGTGTTCAAGGAGATGGGTTAATAATATCAACAACATCTGGAAGCACAGCTTATTCATTGGCAGCTGGGGGATCGATGGTTCATCCACAGGTACATCTCCACTCTACACTAGGTCTCTTGTCTTTGGAACTAAAATATTTCGTTTTTAGTTACTCCAAAGGTTTTGAAGTGAAATTATTCATGTCATGTTCTGTACTATGTGTAAATTGACCTACTTCCTCCAACCACAAAGGGACTTTGAACCTCTCCATTTGTCCACAAATATAAGTGACTTTGAGTACTACTTGCCCCCCTCTACTGAGGGCAACATGCCTGAACAGATGACCAAAACTGTTGCAAAGCTCATCATATCTGATGAAATGTAGTTAACATGAATAAATATCCAGAATTGGCTTAATTTTTTGAAAGAAAATAAGAAAGGTGTATTAATGTGCACTTTTTGTTACTTCCTGGTCAATGATCTTATCATATTTTCAACCCCCCCCCCTGAGGTGTATTTAAGCAAGGATTAGTTCTTCCGATTGTTTCTCATTTAAGTTATCTGTAATTTTGATGCTACGTTTTGCTACCATGCTCAGGTCCCAGGGATCCTTTTCACGCCAATCTGTCCCCATTCATTATCATTCAGGCCTTTGATACTACCTGAATATGTGACATTGCGTGTGCAAGTGCCAATCAATAGCAGAGGGCAGGCATGGGCATCCTTCGACGGCAAGGGCAGGAAGCAGCTAGGGCCAGGTGATGCACTCATCTGCAGCATTTCTCCATGGCCTGTGCCCACTGCCTGCCTGGTGGACTCAACAACTGACTTCCTGCGAAGCATCCATGAGGGCCTCCACTGGAACCTGAGGAAGAGCCAGTCGTTTGATGGCCCTGTTGCATGATCAATGAACTTCTGGTCTGGAAAATTCGATGCGTCTGTTGAATTGGTAGATGTGGTATTTCAAAGCATCTCCTCAACAGTCCAAGAGAAAGAGAAAAAAAAATAACCCTAATCAGATGTATGTACCTACGTCAGTTATGCCGTTAATTGTCTAACAGATCATCTCCTTTACCATTCTCTGTACACAAGATTTGTACTGTTTCTAGTATATTTTGGGCTTATAGGTCTGTGCAGAGTCCAAAGGCATGCCCACCATGTCCATGTAAAGCGCTTTTACATGATGAAGAGTCTTTGTACAAGAAGCAATTGAGCAGACTTCTTCACTGCTATTTTCTTCTTCACAAAAATATATGAATAAATAAATTAAATCTTCTCCAT
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| CDS seq | ATGGATGGCCGGCGCTTGGTTGGTACATCTTCTTTTGCTTTGCTTAATTGCTGCTTGGAGTGGAAGGGAGATTCTTGGGATTGTTATGGGAGAGTAAACCTTAGTGTGGCTACCTCAGATCAGACCTTAGATAGTTCAATGGAATCAGAGAGGGCAGCTTATGCGTTTCTTCCCCAAACTCCAATCAAGTCAACCGATGCACACCTCGTTGAGTTCTCGGAGGCTATGAGAGCTGTTGCGAAAACATTGCGACAAGTTGCAGAAGGGAAAGCTGCTGCTCAAGCAGAGGCAGCTGAGTGGAAGCGCAAGTATGAATTAGAAAAGGCAGTCAAGGCACACAGGCATAATACTGTAACCAAAGGCTGCAGTAACTGTGACAAGGAAAAGTTAGAGCAGTTGGCTAGTCAGCTGACATTGGAGACCACGTCGGTTGATCCAACAAGTTGCTGCGGAAATCATGAGATCTGTTCACGTCAAATTCTCCAGGACGAATGCCCTGGAACTAATAAAATTTCGCATGACAAGATTGCTGCAAGAAAGGCACCATTTAAACTTTCATGGGGATGCAATGGGGATAATAATGGTCAGCACAAGCATGATTTTGTATCCTTCGAAAAAGGGGATATAACAACAGCTGAACGCAGCAATAAGCAGGTATGTTTTCTTTCTGCTCTGTCTGCCAACATGGTCAGATGGCTTAAAGAGCACAATAATATAAACATCTTTGTAGAGCCACGAGTTAGCAAGGAACTAGTGACTGAAGATTCATACTTCAACTTTATCCAAACATGGGATAATGATGAGGAAATGAAGACATTACACACGAAGGTTGATCTCATTGTAACTCTTGGAGGTGATGGAACAGTTTTATGGGCAGCATCATTGTTCAAAGGACCAGTTCCCCCTGTTGTTGCGTTCTCTCTTGGATCATTGGGATTCATGACCCCCTTCTGTATCCTTAATCGTTGGTGTTGGAATCTTGCAAGTGAGCTGTATCGTGAGTGTTTGGACCATGTGCTGAAAAGGCCATTTGGCATCACACTAAGGAGTCGTCTGCAGTGTCATGTAATCTACGATTCAGCTAAAAATGAAGTTGATACGGAGGAGCCAATTCTAGTGCTGAATGAGGTTACAATTGACCGTGGGATGTCATCGTACCTTACCTACTTAGAATGCTATTGTGACAGTTCTTTTGTCACACGTGTTCAAGGAGATGGGTTAATAATATCAACAACATCTGGAAGCACAGCTTATTCATTGGCAGCTGGGGGATCGATGGTTCATCCACAGGTCCCAGGGATCCTTTTCACGCCAATCTGTCCCCATTCATTATCATTCAGGCCTTTGATACTACCTGAATATGTGACATTGCGTGTGCAAGTGCCAATCAATAGCAGAGGGCAGGCATGGGCATCCTTCGACGGCAAGGGCAGGAAGCAGCTAGGGCCAGGTGATGCACTCATCTGCAGCATTTCTCCATGGCCTGTGCCCACTGCCTGCCTGGTGGACTCAACAACTGACTTCCTGCGAAGCATCCATGAGGGCCTCCACTGGAACCTGAGGAAGAGCCAGTCGTTTGATGGCCCTGTTGCATGA
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| Protein seq | MDGRRLVGTSSFALLNCCLEWKGDSWDCYGRVNLSVATSDQTLDSSMESERAAYAFLPQTPIKSTDAHLVEFSEAMRAVAKTLRQVAEGKAAAQAEAAEWKRKYELEKAVKAHRHNTVTKGCSNCDKEKLEQLASQLTLETTSVDPTSCCGNHEICSRQILQDECPGTNKISHDKIAARKAPFKLSWGCNGDNNGQHKHDFVSFEKGDITTAERSNKQVCFLSALSANMVRWLKEHNNINIFVEPRVSKELVTEDSYFNFIQTWDNDEEMKTLHTKVDLIVTLGGDGTVLWAASLFKGPVPPVVAFSLGSLGFMTPFCILNRWCWNLASELYRECLDHVLKRPFGITLRSRLQCHVIYDSAKNEVDTEEPILVLNEVTIDRGMSSYLTYLECYCDSSFVTRVQGDGLIISTTSGSTAYSLAAGGSMVHPQVPGILFTPICPHSLSFRPLILPEYVTLRVQVPINSRGQAWASFDGKGRKQLGPGDALICSISPWPVPTACLVDSTTDFLRSIHEGLHWNLRKSQSFDGPVA |
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| Function | Putative NAD kinase 3 [UniProtKB/Swiss-Prot:Q60E60] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_05g0015200 | OsIR64_05g0015200.02 | Chr05 | 19787610 | 19795138 | + | NAM | ||
| CDS seq | ATGGATGGCCGGCGCTTGGTTGGTACATCTTCTTTTGCTTTGCTTAATTGCTGCTTGGAGTGGAAGGGAGATTCTTGGGATTGTTATGGGAGAGTAAACCTTAGTGTGGCTACCTCAGATCAGACCTTAGATAGTTCAATGGAATCAGAGAGGGCAGCTTATGCGTTTCTTCCCCAAACTCCAATCAAGTCAACCGATGCACACCTCGTTGAGTTCTCGGAGGCTATGAGAGCTGTTGCGAAAACATTGCGACAAGTTGCAGAAGGGAAAGCTGCTGCTCAAGCAGAGGCAGCTGAGTGGAAGCGCAAGTATGAATTAGAAAAGGCAGTCAAGGCACACAGGCATAATACTGTAACCAAAGGCTGCAGTAACTGTGACAAGGAAAAGTTAGAGCAGTTGGCTAGTCAGCTGACATTGGAGACCACGTCGGTTGATCCAACAAGTTGCTGCGGAAATCATGAGATCTGTTCACGTCAAATTCTCCAGGACGAATGCCCTGGAACTAATAAAATTTCGCATGACAAGATTGCTGCAAGAAAGGCACCATTTAAACTTTCATGGGGATGCAATGGGGATAATAATGGTCAGCACAAGCATGATTTTGTATCCTTCGAAAAAGGGGATATAACAACAGCTGAACGCAGCAATAAGCAGGTATGTTTTCTTTCTGCTCTGTCTGCCAACATGGTCAGATGGCTTAAAGAGCACAATAATATAAACATCTTTGTAGAGCCACGAGTTAGCAAGGAACTAGTGACTGAAGATTCATACTTCAACTTTATCCAAACATGGGATAATGATGAGGAAATGAAGACATTACACACGAAGGTTGATCTCATTGTAACTCTTGGAGGTGATGGAACAGTTTTATGGGCAGCATCATTGTTCAAAGGACCAGTTCCCCCTGTTGTTGCGTTCTCTCTTGGATCATTGGGATTCATGACCCCCTTCTGTATCCTTAATCGTTGGTGTTGGAATCTTGCAAGTGAGCTGTATCGTGAGTGTTTGGACCATGTGCTGAAAAGGCCATTTGGCATCACACTAAGGAGTCGTCTGCAGTGTCATGTAATCTACGATTCAGCTAAAAATGAAGTTGATACGGAGGAGCCAATTCTAGTGCTGAATGAGGTTACAATTGACCGTGGGATGTCATCGTACCTTACCTACTTAGAATGCTATTGTGACAGTTCTTTTGTCACACGTGTTCAAGGAGATGGGTTAATAATATCAACAACATCTGGAAGCACAGCTTATTCATTGGCAGCTGGGGGATCGATGGTTCATCCACAGGTCCCAGGGATCCTTTTCACGCCAATCTGTCCCCATTCATTATCATTCAGGCCTTTGATACTACCTGAATATGTGACATTGCGTGTGCAAGTGCCAATCAATAGCAGAGGGCAGGCATGGGCATCCTTCGACGGCAAGGGCAGGAAGCAGCTAGGGCCAGGTGATGCACTCATCTGCAGCATTTCTCCATGGCCTGTGCCCACTGCCTGCCTGGTGGACTCAACAACTGACTTCCTGCGAAGCATCCATGAGGGCCTCCACTGGAACCTGAGGAAGAGCCAGTCGTTTGATGGCCCTGTTGCATGA
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| Protein seq | MDGRRLVGTSSFALLNCCLEWKGDSWDCYGRVNLSVATSDQTLDSSMESERAAYAFLPQTPIKSTDAHLVEFSEAMRAVAKTLRQVAEGKAAAQAEAAEWKRKYELEKAVKAHRHNTVTKGCSNCDKEKLEQLASQLTLETTSVDPTSCCGNHEICSRQILQDECPGTNKISHDKIAARKAPFKLSWGCNGDNNGQHKHDFVSFEKGDITTAERSNKQVCFLSALSANMVRWLKEHNNINIFVEPRVSKELVTEDSYFNFIQTWDNDEEMKTLHTKVDLIVTLGGDGTVLWAASLFKGPVPPVVAFSLGSLGFMTPFCILNRWCWNLASELYRECLDHVLKRPFGITLRSRLQCHVIYDSAKNEVDTEEPILVLNEVTIDRGMSSYLTYLECYCDSSFVTRVQGDGLIISTTSGSTAYSLAAGGSMVHPQVPGILFTPICPHSLSFRPLILPEYVTLRVQVPINSRGQAWASFDGKGRKQLGPGDALICSISPWPVPTACLVDSTTDFLRSIHEGLHWNLRKSQSFDGPVA
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_05g0015200 | OsIR64_05g0015200.03 | Chr05 | 19787610 | 19790726 | + | NAM | ||
| CDS seq | ATGGATGGCCGGCGCTTGGTTGGTACATCTTCTTTTGCTTTGCTTAATTGCTGCTTGGAGTGGAAGGGAGATTCTTGGGATTGTTATGGGAGAGTAAACCTTAGTGTGGCTACCTCAGATCAGACCTTAGATAGTTCAATGGAATCAGAGAGGGCAGCTTATGCGTTTCTTCCCCAAACTCCAATCAAGTCAACCGATGCACACCTCGTTGAGTTCTCGGAGGCTATGAGAGAAGGGAAAGCTGCTGCTCAAGCAGAGGCAGCTGAGTGGAAGCGCAAGTATGAATTAGAAAAGGCAGTCAAGGCACACAGGCATAATACTGTAACCAAAGGCTGCAGTAACTGTGACAAGGAAAAGTTAGAGCAGTTGGCTAGTCAGCTGACATTGGAGACCACGTCGGTTGATCCAACAAGTTGCTGCGGAAATCATGAGATCTGTTCACGTCAAATTCTCCAGGACGAATGCCCTGGAACTAATAAAATTTCGCATGACAAGATTGCTGCAAGAAAGGCACCATTTAAACTTTCATGGGGATGCAATGGGGATAATAATGGTCAGCACAAGCATGATTTTGTATCCTTCGAAAAAGGGGATATAACAACAGCTGAACGCAGCAATAAGCAGGTAGCTATTTGA
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| Protein seq | MDGRRLVGTSSFALLNCCLEWKGDSWDCYGRVNLSVATSDQTLDSSMESERAAYAFLPQTPIKSTDAHLVEFSEAMREGKAAAQAEAAEWKRKYELEKAVKAHRHNTVTKGCSNCDKEKLEQLASQLTLETTSVDPTSCCGNHEICSRQILQDECPGTNKISHDKIAARKAPFKLSWGCNGDNNGQHKHDFVSFEKGDITTAERSNKQVAI
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_05g0015200 | OsIR64_05g0015200.01 | Chr05 | 19787220 | 19795140 | + | NAM | ||
| CDS seq | ATGGATGGCCGGCGCTTGGATTGTTATGGGAGAGTAAACCTTAGTGTGGCTACCTCAGATCAGACCTTAGATAGTTCAATGGAATCAGAGAGGGCAGCTTATGCGTTTCTTCCCCAAACTCCAATCAAGTCAACCGATGCACACCTCGTTGAGTTCTCGGAGGCTATGAGAGCTGTTGCGAAAACATTGCGACAAGTTGCAGAAGGGAAAGCTGCTGCTCAAGCAGAGGCAGCTGAGTGGAAGCGCAAGTATGAATTAGAAAAGGCAGTCAAGGCACACAGGCATAATACTGTAACCAAAGGCTGCAGTAACTGTGACAAGGAAAAGTTAGAGCAGTTGGCTAGTCAGCTGACATTGGAGACCACGTCGGTTGATCCAACAAGTTGCTGCGGAAATCATGAGATCTGTTCACGTCAAATTCTCCAGGACGAATGCCCTGGAACTAATAAAATTTCGCATGACAAGATTGCTGCAAGAAAGGCACCATTTAAACTTTCATGGGGATGCAATGGGGATAATAATGGTCAGCACAAGCATGATTTTGTATCCTTCGAAAAAGGGGATATAACAACAGCTGAACGCAGCAATAAGCAGATTTTGCTAAAGTGGGAATCCCCTCCACAAACTGTTCTTTTCGTGACTAAACCTAATTCCAACTCCGTGCACGCTCTCTGTGCTGAAATGGTTAGATGGCTTAAAGAGCACAATAATATAAACATCTTTGTAGAGCCACGAGTTAGCAAGGAACTAGTGACTGAAGATTCATACTTCAACTTTATCCAAACATGGGATAATGATGAGGAAATGAAGACATTACACACGAAGGTTGATCTCATTGTAACTCTTGGAGGTGATGGAACAGTTTTATGGGCAGCATCATTGTTCAAAGGACCAGTTCCCCCTGTTGTTGCGTTCTCTCTTGGATCATTGGGATTCATGACCCCCTTCTCAAGTGAGCTGTATCGTGAGTGTTTGGACCATGTGCTGAAAAGGCCATTTGGCATCACACTAAGGAGTCGTCTGCAGTGTCATGTAATCTACGATTCAGCTAAAAATGAAGTTGATACGGAGGAGCCAATTCTAGTGCTGAATGAGGTTACAATTGACCGTGGGATGTCATCGTACCTTACCTACTTAGAATGCTATTGTGACAGTTCTTTTGTCACACGTGTTCAAGGAGATGGGTTAATAATATCAACAACATCTGGAAGCACAGCTTATTCATTGGCAGCTGGGGGATCGATGGTTCATCCACAGGTCCCAGGGATCCTTTTCACGCCAATCTGTCCCCATTCATTATCATTCAGGCCTTTGATACTACCTGAATATGTGACATTGCGTGTGCAAGTGCCAATCAATAGCAGAGGGCAGGCATGGGCATCCTTCGACGGCAAGGGCAGGAAGCAGCTAGGGCCAGGTGATGCACTCATCTGCAGCATTTCTCCATGGCCTGTGCCCACTGCCTGCCTGGTGGACTCAACAACTGACTTCCTGCGAAGCATCCATGAGGGCCTCCACTGGAACCTGAGGAAGAGCCAGTCGTTTGATGGCCCTGTTGCATGA
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| Protein seq | MDGRRLDCYGRVNLSVATSDQTLDSSMESERAAYAFLPQTPIKSTDAHLVEFSEAMRAVAKTLRQVAEGKAAAQAEAAEWKRKYELEKAVKAHRHNTVTKGCSNCDKEKLEQLASQLTLETTSVDPTSCCGNHEICSRQILQDECPGTNKISHDKIAARKAPFKLSWGCNGDNNGQHKHDFVSFEKGDITTAERSNKQILLKWESPPQTVLFVTKPNSNSVHALCAEMVRWLKEHNNINIFVEPRVSKELVTEDSYFNFIQTWDNDEEMKTLHTKVDLIVTLGGDGTVLWAASLFKGPVPPVVAFSLGSLGFMTPFSSELYRECLDHVLKRPFGITLRSRLQCHVIYDSAKNEVDTEEPILVLNEVTIDRGMSSYLTYLECYCDSSFVTRVQGDGLIISTTSGSTAYSLAAGGSMVHPQVPGILFTPICPHSLSFRPLILPEYVTLRVQVPINSRGQAWASFDGKGRKQLGPGDALICSISPWPVPTACLVDSTTDFLRSIHEGLHWNLRKSQSFDGPVA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr05 | 19788111 | 19788259 | + | OsIR64_05g0015200.01,OsIR64_05g0015200.02 | OsIR64_05g0015200.02,OsIR64_05g0015200.01,OsIR64_05g0015200.03 | All |
| A5 | Chr05 | 19787627 | 19787958 | + | OsIR64_05g0015200.03,OsIR64_05g0015200.02 | OsIR64_05g0015200.02,OsIR64_05g0015200.01,OsIR64_05g0015200.03 | All |
| A5 | Chr05 | 19793149 | 19793662 | + | OsIR64_05g0015200.02 | OsIR64_05g0015200.02,OsIR64_05g0015200.01 | All |
| MX | Chr05 | 19790714 | 19791173 | + | OsIR64_05g0015200.01 | OsIR64_05g0015200.02,OsIR64_05g0015200.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.696279 | 0.237521 | 3.020835 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0388400 | RBH | 3.180142 | 3.693697 | 2.337466 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g32210 | RBH | 2.310258 | 3.519169 | 0.759763 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0388400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0015600 | RBH | 0.748887 | 4.178707 | 6.712551 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0015600 | RBH | 0.324861 | 1.047339 | 2.843571 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0015430 | RBH | 0.861863 | 4.112751 | 6.999372 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0015450 | RBH | 0.144408 | 0.201073 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0015640 | RBH | 15.147030 | 5.148681 | 16.265917 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0288100 | RBH | 6.0703225 | 4.811532 | 6.1247995 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0045960 | RBH | 0.365129 | 2.785048 | 1.725320 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0298800 | RBH | 9.90827 | 4.901887 | 16.9551835 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0015450 | RBH | 0.426245 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0015450 | RBH | 1.768865 | 4.678818 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0015480 | RBH | 17.738092 | 12.749970 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0015520 | RBH | 0.000000 | 0.000000 | 0.557990 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0015590 | RBH | 0.260150 | 3.142590 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G015090 | RBH | 0.961191 | 0.775101 | 2.464751 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0015400 | RBH | 3.542896 | 4.243744 | 11.457457 |
