Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_03g0019390 | OGI:03040810 | 13/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr03:15826451-15827186 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGCGAGCGAAGGATCTGAATGAGATGCTCCTGGTGGCCGAAGCGGAGGCGGCGCCGCCGGCGAACCCGCGGGGGTTCGTGAACCTGCTGTGCAAGCAGCTCGACCACCTCGGCAACGCTAGGTTCGACCCGGCATTGTTCCGCGTCGACGCCTACGGCAACGTGCTCTACCTCCATGCCGACTCTGCCTCGTCTCTCGCGTGGGACATCGACCACTGGTTCCATGTGCCCATAAGAAACACATAAATTGAACGAACTCATCCCAAGATCCGCTTCGAGATCATTCATTCGTAGATAGGGCTGAGGGCAATTTTGTCTTTTTAAAATTTCTCTCCCATCCTTTTTATCATAAATGATAAAATATTGTCTCGAGTGTCCTACGTACAGCAAATTACATGAATTTTGTGGTGTTCATCAGCAACGACACGATTTTACAGTGTCTCACAGCCAATTACATAATTTTTGGGTGCCCCAGGGCAAATTTTGCCATAGTAATGTTGCTAGTTCTGTCACCAGCCCACTATTACTACAATTTTCACAATTTTCAAATTAGCACCTGATATTTTCTGATATTATATAATAGTCTAATATTTTTTTTAAATCAAATGAATCACACACACACACACACACACACACACATATATATATATATATATATATATATATATATATATATATTCAAATAATTAGTATGAACATTTTACAGTAACAAAGCAGGGGTACTTTGTTCGTATAA
More
|
||||||||||
| CDS seq | ATGCGAGCGAAGGATCTGAATGAGATGCTCCTGGTGGCCGAAGCGGAGGCGGCGCCGCCGGCGAACCCGCGGGGGTTCGTGAACCTGCTGTGCAAGCAGCTCGACCACCTCGGCAACGCTAGGTTCGACCCGGCATTGTTCCGCGTCGACGCCTACGGCAACGTGCTCTACCTCCATGCCGACTCTGCCTCGTCTCTCGCGTGGGACATCGACCACTGGGGTACTTTGTTCGTATAA |
||||||||||
| Protein seq | MRAKDLNEMLLVAEAEAAPPANPRGFVNLLCKQLDHLGNARFDPALFRVDAYGNVLYLHADSASSLAWDIDHWGTLFV |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_03g0019390 | OsIR64_03g0019390.01 | Chr03 | 15826451 | 15827186 | + | NAM | ||
| CDS seq | ATGCGAGCGAAGGATCTGAATGAGATGCTCCTGGTGGCCGAAGCGGAGGCGGCGCCGCCGGCGAACCCGCGGGGGTTCGTGAACCTGCTGTGCAAGCAGCTCGACCACCTCGGCAACGCTAGGTTCGACCCGGCATTGTTCCGCGTCGACGCCTACGGCAACGTGCTCTACCTCCATGCCGACTCTGCCTCGTCTCTCGCGTGGGACATCGACCACTGGGGTACTTTGTTCGTATAA
More
|
|||||||
| Protein seq | MRAKDLNEMLLVAEAEAAPPANPRGFVNLLCKQLDHLGNARFDPALFRVDAYGNVLYLHADSASSLAWDIDHWGTLFV |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0176500 | SBH | 0.0 | 0.0 | 3.363760 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g08150 | SBH | 0.0 | 0.0 | 0.547924 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0176500 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0019870 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0016860 | SBH | 0.442515 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0005560 | SBH | 0.0 | 12.604956 | 0.496326 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0005200 | SBH | 0.0 | 0.749360 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0019530 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0069900 | SBH | 5.907762 | 2.089901 | 2.162407 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0016390 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0070200 | SBH | 5.647761 | 0.0104915 | 16.76776 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0019560 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0019570 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0019640 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0019500 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0019420 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G019480 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0019330 | RBH | 0.0 | 0.0 | 0.0 |
