Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_01g0013020 | OGI:01032840 | 5/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr01:10799083-10800231 | ||||||||
| Gene Symbol | RLCK30, OsRLCK30, SPARK6, OsSPARK6 | ||||||||||
| DNA seq | AGGTCAAGGTTCAAAGAAGGCAGAACTCCATGATGTCAGCATGCAGATAATCAAGATCAACCGCCCTAGAAAACTTGGAGAACAAATGAATTGTGGATGGCATCGTCGGACGAGTTGATGGATTGGGGTGAAGGCACTGTATAGCAACCGTGATCAATCCAAATATCTCGCTTGCAACTTCACCTTCTGGAGGCGGGAGTCTGGTGTCCAACAAATCCTTCATCGGTGTGCTTTTCTTGCTAGGGCATGAGATCGACGAAACAAAGTCTCCAGGGTGAGATCCCTTCAACAGCTCAAGAACTACCACCCCGAAGCTATAAATGTCACATTTCTCTGTCACCTTCGTAGTGTATGCCAGCTCTGAAGTATCAGGAGTTCAGTCAGATTAAAATGTACTAAATATTAATCTATGTTAATATTGTGGTAACTTCTTCATGCATATTAAGTATAGCGTAGAGCATATTTTTTAGTAATATAATGCAGCTTCATGCAACAAGAAAAATACATAAGATAAGAAAAATAATAATCAAAACAGTAGGTTCAACATAATAAATTTTGTTTACCTGGTGCAAGATATCCTTTTGTACCAGCGAGCCTTGTGTGTCCTGATCCATCAGCATCCAGTATTTTAGCTATCCCAAAGTCTGATAAACAAGCTCTGAACTCCAGATCTAGCAGAATGTTTTTGGTTGTTACATCTCGATGGACTATAGGATCTGAACAGTCGTGATGCAAGTAAGATAGGGCATGAGCAACATCCTGAGCAATACATAACCTGCGCTTCCAATCCAACTCGCTTGCACTTCTGTAGGACTTGAGAGCTGTCAACAAGTTTCCTCCTTTCATATACTCGTAGACAATAAACTTATCTCGTGCTGTACAGCAGTAGCCAAAGACTTTTACAATGTTCTTGTGGCGTATTTGCATTGTGGCCTCTATTTCACGATAGAACATTTGCTCGTTTATCAAACGGCCATTCTCTGTTGCATTTATCTTCTTGACTGCAAAATTTTTACCATTTGATAATTTAGCTACATAGACAGACACATAACCACCTGCTCCAATGCAATATTTTTCACTAAAGTTCTCCGTCGCTTCAATAATTTGCTCGTATGCATTTCCACCATCAAAGTTTAAGACAGAGAACAT
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| CDS seq | ATGTTCTCTGTCTTAAACTTTGATGGTGGAAATGCATACGAGCAAATTATTGAAGCGACGGAGAACTTTAGTGAAAAATATTGCATTGGAGCAGGTGGTTATGTGTCTGTCTATGTAGCTAAATTATCAAATGGTAAAAATTTTGCAGTCAAGAAGATAAATGCAACAGAGAATGGCCGTTTGATAAACGAGCAAATGTTCTATCAGCTGGCATACACTACGAAGGTGACAGAGAAATGTGACATTTATAGCTTCGGGGTGGTAGTTCTTGAGCTGTTGAAGGGATCTCACCCTGGAGACTTTGTTTCGTCGATCTCATGCCCTAGCAAGAAAAGCACACCGATGAAGGATTTGTTGGACACCAGACTCCCGCCTCCAGAAGGTGAAGTTGCAAGCGAGATATTTGGATTGATCACGGTTGCTATACAGTGCCTTCACCCCAATCCATCAACTCGTCCGACGATGCCATCCACAATTCATTTGTTCTCCAAGTTTTCTAGGGCGGTTGATCTTGATTATCTGCATGCTGACATCATGGAGTTCTGCCTTCTTTGA
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| Protein seq | MFSVLNFDGGNAYEQIIEATENFSEKYCIGAGGYVSVYVAKLSNGKNFAVKKINATENGRLINEQMFYQLAYTTKVTEKCDIYSFGVVVLELLKGSHPGDFVSSISCPSKKSTPMKDLLDTRLPPPEGEVASEIFGLITVAIQCLHPNPSTRPTMPSTIHLFSKFSRAVDLDYLHADIMEFCLL |
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| Function | MDIS1-interacting receptor like kinase 2 [UniProtKB/Swiss-Prot:Q8VZG8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_01g0013020 | OsIR64_01g0013020.01 | Chr01 | 10799083 | 10800231 | - | NAM | ||
| CDS seq | ATGTTCTCTGTCTTAAACTTTGATGGTGGAAATGCATACGAGCAAATTATTGAAGCGACGGAGAACTTTAGTGAAAAATATTGCATTGGAGCAGGTGGTTATGTGTCTGTCTATGTAGCTAAATTATCAAATGGTAAAAATTTTGCAGTCAAGAAGATAAATGCAACAGAGAATGGCCGTTTGATAAACGAGCAAATGTTCTATCAGCTGGCATACACTACGAAGGTGACAGAGAAATGTGACATTTATAGCTTCGGGGTGGTAGTTCTTGAGCTGTTGAAGGGATCTCACCCTGGAGACTTTGTTTCGTCGATCTCATGCCCTAGCAAGAAAAGCACACCGATGAAGGATTTGTTGGACACCAGACTCCCGCCTCCAGAAGGTGAAGTTGCAAGCGAGATATTTGGATTGATCACGGTTGCTATACAGTGCCTTCACCCCAATCCATCAACTCGTCCGACGATGCCATCCACAATTCATTTGTTCTCCAAGTTTTCTAGGGCGGTTGATCTTGATTATCTGCATGCTGACATCATGGAGTTCTGCCTTCTTTGA
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| Protein seq | MFSVLNFDGGNAYEQIIEATENFSEKYCIGAGGYVSVYVAKLSNGKNFAVKKINATENGRLINEQMFYQLAYTTKVTEKCDIYSFGVVVLELLKGSHPGDFVSSISCPSKKSTPMKDLLDTRLPPPEGEVASEIFGLITVAIQCLHPNPSTRPTMPSTIHLFSKFSRAVDLDYLHADIMEFCLL |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0296000 | RBH | 0.266915 | 0.0 | 0.673085 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g19160 | RBH | 0.273545 | 0.0 | 0.148065 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0296000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0001370 | SBH | 0.0 | 0.0 | 0.664108 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0001270 | SBH | 0.045626 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0013070 | SBH | 3.319249 | 0.000000 | 5.627805 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0179600 | RBH | 0.261496 | 1.387034 | 1.2990615 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0133500 | SBH | 3.3641335 | 0.162103 | 1.020925 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0015250 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0001420 | SBH | 0.074193 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0013060 | SBH | 1.377518 | 6.784429 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0001350 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0001270 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G001430 | SBH | 0.000000 | 0.000000 | 0.208976 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0001310 | SBH | 0.678274 | 1.297609 | 0.351870 |
