Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsGoSa_12g0000470 OGI:12000850 | 8/16 GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) Chr12:386913-395301
Gene Symbol MFS7, OsMFS7
DNA seq

atggagcagcagcagcaggggcggaggagaggcgcaggatggcggcgttgggcggtgctggtggcgacggtgtggatacaggcggtgacggggacaaacttcgacttctcggcctactcgtcggcgctcaaggcgtccctgggtgtctcgcaggaggcgctcaactacctggccaccgcctccgacctgggcaaggcgctgggctggtcgtcgggcctcgccctcatccacctccccctccccgccgtcctcctcctctccgccgcctccggcctcgccgcatacgccctccagtacgccctcatcctcgactacctccacctcccctacccgctcgtacgtacacttgatctcttgaatttcttttctttatttattatatcgatcggcttgttttcagcttcattatttaattagcttgctagttaattacgagtacctaattaaggtatccttccattatgattaaccgtgcgtgttttagtactagcatatatggtatggagatatatacatacatacatacaagaaatataatggagatcttagctaattaagctagccaactggagtatactgattgatcctagctagcacgtacgtggatgtatagaggccaaggccagcagggttcggagattcgagatcgataggcagtccatttcacaatgtaagtctctaatatttttcatattcatagtgatgttattgaatttaaacatatatatctatctagattcattaacattaatataaatgtgtaaaatgctagaatgatttacattgtgaaacggagaaagtactactacagtagtagtaatgaagctactgatctgagtggccacaaataagttgcaatcatatatcacattcatggacgcaattctaacgtcccattcaactgtatatatatttactactgaattatatgtatacattaaatcgatatctgagagacgcaatgcatccatatctctctccgtcgccgcgcccacctctcgtttttccttggcttacaattttttggaatcgtctgctgcaatcgattacgatttaccaatatactcctactgtgtattactcccttcgtattttaatatatgacgccgttgactttttaaccaacgtttaactattcgttttattaattttttttgcaaatatgaaaatatttaagtcatgtttaaacaacatttgatgatgaatcaaatcacagtaaaataaatgataactatataaattttttgaataagacgaatggtcaaacgttaaataaaaagttaacggtgttatacattgaaatatggaggtatggaggtagtataatattacccatgttatacatagtcaatcttatatactgtgtatattgtagcgcccgttccgtcgtggtgcctagcgggaaaatttactcttaaaaaaccctaattgcaaaatttgtttccttgcttgttgtctagtgtccgtgccatctcaagatttcaatccccgatctaccgtcgagttcaattccgaatccaaacctttcaaatcaaaattcctccgcaaaagtcgaccttgcctcccccaaggtcgatgggccgaaactcgctcgacccatctccctctccctccccggcccactctcccgagtgctccctctctctctcccccggctctctctctcgggcgccatctctctctctctccctctctcccacggcgcgctcacccccctcccgctcagccctactccacctcgctcgcgagctgctcgcgcgcgtgagccgcgccgagcgcccccctcctccctctccgctccttctccgcgcgccacgcgcgcgtgcgcgtgagccgccgcgccgagcgccccctccttccctcgctctgccgcgcctgctgccgcgcaaccactcggccccgcgggccagcatgtgcgcgcccgcgcggacgccgtccgttgcaagccgcgcgcgcgcgagccgagtggccgactgcccggtcgacgccgccgtcagcctctgcgcacgcctgtcaccggtgtcgccgctccgctccaatccgctcgccgtcgtcaccgcccgaccccgccactccgcgcgcaagccgccaagaggcggaggcggagccctcctctccctctgccgagtcgccccgcttccctcctcctttttcccaaatcggcaaaggggcaagcccctttttctccctccttttctcccttttcctcccgccggcgtcatctccccctccctcctgtcgccgttttggccgctagccgagcgccagctcgcccttgaccgcgcaagtcggttcccaaaccgacattgccgcctttaaacctatccccccattcgccagtcgccattgttgccgccctcggtctcgccgtcgccgatcgtcgctgcgcgtgtcggaggagccggcacgagcaaggacgcggaagaggactccggccgcaccctctccttcctcttccccggcccgaggccggagagatcactcccgtgccgtcggcctctcttcactgcgcccttcaccccgcacagtgatgcctccctccgttctccctccccgctccatcttccccccttagatttcggtggtagcacgagtagtctccccgtagttagccggcgccgccccgaccgttgccgtcgcccgccgagtgctcgccgccgtcgccgctcgggttccgtagcacccgcacgtcgccagcctccctcggcgtgttccctcctaatccgacgctagcatcgagttcccgtggccgcgtagatgctcccaccgccgggaatcggcccctcttgacctcgtcgccgtttccctctcctcccgccgccggttgtcgccgccgcgattcgccgccgtcaagctccctccggtgaatccgagccgttggctcgcctccccgcgtcccgtgcaaccacccggtgtactcgctgtcgcttgtatcgccgtggctcgctccgccgatcgccgccgccgcccgccgtccgtttcggccgggccttcgtctacctcccgccgacccgcgtggctgccacgtcggcgccacgtcggcgccacctcggccgcgaccagataagccgacccggccagccgctccctccgtttctccccgtgcgcgtggtccgcggtaagccgtgaggctgcacgtgggcccgccgcctccgccctcaccgcgagccgcgcgcatgcgccgcgcctcccctccccaaaccctagcacgccgcgtgcaccccgctcacggtgagccgagccgccgacaagcgggtcccacccgggactgcgcgtggtgagcctggtccaccggccctctctctcctccctcccgcgcgcgcgcgcgtatgggccgccttgggccggccggcccattagcttggccggtccgctccatttcccttgggccgcgccctagccgcccgaggaaaagtctattatccctcccccttccttttcttttcttttcttttcaaaaggatttaatttaatcctttttcctttagatcaaaaatccaataaccttagaaactcaatatcttcccaaccgtaactccgtttgactccgttcaacttccaaaattcctcaaatctcgagatctatctaatggcacgcttagaggtcaataatagggctttattttcgccgtttgttgagttgttccgtttcgcgtgtagtttcggagcccgaagacccgcagtgcaaggatttcgaagaccaagctccagatctcgagcaaggcaagccaccttcgaacatcttgagcctataattgaaatctaattatattgattgcaaaaatattatgcattgataggatcgcacttattctgcttgtcccgtctgcaaggcagattggcggacctacctaatttgttgcatttgatccttccattgataattgctataccatgtccccttgtaaccacccagttgcgtctcaatattcgtgcaccctgtgcgagtatcgacgaacgccttcaaacttaaaatctgagtaacaacttgggtaaaactgaagttttacaaaagccttggaaaacccgacacctgggtcggtgtttgcgaactaaatgaatttccaaaatcgcggaccggagaacgtaccgggtgtacggtttcccgctctcgcacttaaggaccgattccttggaatttcatccaaacataagacaattacgaccacatgggtggaatgggacacccctggctgagtaactagcttatcaggggagccttgatgccgagagacatgtggattcgccggggtggtgtcggggaggacccctgggcttcctggcacagtatggtctgggacctaacctgttgttggtctgggacccctctcgtcggcatatggtaaacctgtgtcggctttcgaaacgccttgtcatgaaagcttggaggtctcccgacgtggctgatccccacgggctgagagatccgggttagtaatgtcgtgtgggtaaagtgtaccccctctgcagaggttattaaactgttcgaacagccgtgcccacggtcatgggcggatgtgagatgattcctagcgtagttttgtttgactactgcttgtgaaattgctattgtgaaaaggggttcgatgtttgaaaaatcagcagctgacgggatcagctgggcccgggtggccgtttgaaaagttgttggcccgggtggccgtttaaaaagctgttggccgggtgccaaccttgtttcaattttaaagattgatacattgcacatactccgaccggacgagacacactgtctcatccgtgtcgtttgagaagcactcacttagtcttttagaaaagagttcaaacgaaatcaattgcgaaaacaacagcctttccttgaagtctgcattaaacacttaattcccatggcttgctgagtactcccgtactcacccttgctctatataaatcaccccccccagttgctgaagaagatgaagcggatcctgctgatgaggagttcttccaggagcaagccggctacgatgagttttagggtttcggcctagttcccaagtcgcgcctgtgatgtttggtccaagtcctgcttccgtttcccttttgtaatgcagttgtgagctcgggatctgtccgcagcccaacatgactgtaatcctactctataataaagagacctctgttgctgtgatattctgtcttcctgtgataccagcactgtttcctgggactggtatcggataacaggttaatttggagcgtcacgagctagttccgttcggggctggttcggggcgtgacatatatgcagcaataagttaatttctgccttaaacatgtatctggattaattgattacttcaatcaactcaatacatattttgggatggagggaataacaaacaactcctaaccaacaacacccgcatatgccatcataaaccacgatcaaaagtgtttatttaattgattctttctcatctcccttttaattttcataaatgctagctgcttgcgcctatttcaaaagatgacgagccaaaaataaaaatcccacacacgatcgaagaagaaacaaacaaatggttctcaagtctcagcttaaaatggtccacaaaagtataaatagctaaaactccatcgataagttcacgcttcactcatgtaaaactcacgaacacactaacgctacggcacaatgtaaaactacaatccattctgttactctaaacatccaggtagctctgtgtcctgaattacagttaataaaactcgctatcaaaatacccatgccagtgaatcctgcattattggcatcatcatgaattaatgccttcctgcccaactatcagtttcagcttcaatccaactttgactagtagatgaacaagctaccattctccccccaaagaattcttcttacagaaggaccatcactacactgtctccccttcttttggtttctttctgactggtaggtgttgatgcaacttgccaagtcacctccttccttcaacttctccatcataaacagtagcaagaaagaagcagcacatcctttttatcagttacagtaaccaaatagtatgaacgtattcctgattttaggagtccataaccaatcctctgctaccataacatactttgaattgcataataagagttgttacactgcataactcaaagacataattagccgtcctggttactcctctgaaactaaaacagcatgcctagacaaggtcagcaagttacctattatcagaccggctgcagttttccttttctgaaaccaaacggacatgaggcctttaacaaagcaaggtcttcaaccgccaaactgaaggcactccctctaaaacagaagccacatcatcagcctagaacaaaagtcctgacaaagaaaagcattgctagcgcgtcagccataaatgtgatcacaactacaacatcacacatgcctgttgcattgcatttttcagtactcagaacagcatcctcaacctgctcatgcttcacatattcttcctttccttgggcagatcttttgatgtcagtaggaagtacgacatcctttttacagatgaggaagcataacatcctgataaatacaaataccaattagatcacagaattattaccgaagatcatgccattacagtttttccgtaaccgtacataacactctcttctaaacgctactcgaagcaccaaatctggatttatcactttgttgtatgcattacatattagtatacttcatgtcttgcatacattaaaccaggatgtatgacctgatcgttggtacataataacttactggtaggcatgttgtcctttaactctcatcaacagtattaaaccagcgatgtatggacatgctttttaactgtttgtggccagtaaaactgagctaaccaactgatggactaatttggatcatgtattactatgcaggtgttcttgatctgcctggtagcaggttgcagtatctgctggttcaacacagtatgctttgtgctctgcattcgcagtttctcctcgagcaatcgcccactggccctctccctctccataagtttcaatgggctaagtgctgcattctacaccctctttgccaatgccctctcccccttttccccatctgtatacctccttctcaatgcaattgtccctctcgttgtatctcttgttgcactgccagcaatactcctctgccacccacatgacggccacctccacgttgtgcccaagcatgacaaacatatctttcttggtctctacctcctcgcgttcatcactggcatatatctagtgatcttcggctctttcaacacaaccaactccactgcatgggtggtccttacaggtgccatggtcctcctcgccctccctctcatcatccctgcctcctccagttgttctcatgtggacacacatgaccctgaacctactgctcaactcaaccatgacgattcaaaaaaaccacttttgctcaataataaccacagcacagagtccaatgccatgatccagaaaacagtggaacagccgatgcaggattgttgcttggggacaatactggagaagggacgcatgttggttctttgtgaggagcatagtgcaaagaagcttatccagtgcgtcgacttctggctatactacatagcctacttctgtggtgccactgttgggctagtgtacagcaacaacttggggcaaattgcacaatcatttcaccgggaatctcagctcaccatgcttcttgccgtctactcctcctgttccttctttggccgccttctctctgcacttccagacttccttcacaggtccctatgtcttgttctatatacttgcatgcatcttaattctcactagctggtccataaactaactatataatgaatttgcatgcaggaaggtttcatttgctcggacagggtggcttgcagctgcgttggttcccatgccaatggcgttcttcctaatgtggaaattgcatgatgtaaacactctggtagcaggaacagcgctaattggcctaagctcaggcttcatctttgctgcagcagtgtcagtgacctctgagctctttggaccaaacagcattggcatgaaccataacatcctcatcaccaacatccctcttggatcacttctctatggtcagattgctgccctagtgtatgatgcaaatggcctaaagatgtcagtaatagacaaccacaatggcatgattgacactatggtggtttgcatggggccaaagtgctactcaaccacattcttcgtgtggggttgtatcacattcctagggttggtgtcaagcataatcctattcttgagaacaagaacagcttacagtgctgctaatggtcagcaagttataaacaccacagccaagtttcgagttgacagaactccttga

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CDS seq

atggagcagcagcagcaggggcggaggagaggcgcaggatggcggcgttgggcggtgctggtggcgacggtgtggatacaggcggtgacggggacaaacttcgacttctcggcctactcgtcggcgctcaaggcgtccctgggtgtctcgcaggaggcgctcaactacctggccaccgcctccgacctgggcaaggcgctgggctggtcgtcgggcctcgccctcatccacctccccctccccgccgtcctcctcctctccgccgcctccggcctcgccgcatacgccctccagtacgccctcatcctcgactacctccacctcccctacccgctcgtgttcttgatctgcctggtagcaggttgcagtatctgctggttcaacacagtatgctttgtgctctgcattcgcagtttctcctcgagcaatcgcccactggccctctccctctccataagtttcaatgggctaagtgctgcattctacaccctctttgccaatgccctctcccccttttccccatctgtatacctccttctcaatgcaattgtccctctcgttgtatctcttgttgcactgccagcaatactcctctgccacccacatgacggccacctccacgttgtgcccaagcatgacaaacatatctttcttggtctctacctcctcgcgttcatcactggcatatatctagtgatcttcggctctttcaacacaaccaactccactgcatgggtggtccttacaggtgccatggtcctcctcgccctccctctcatcatccctgcctcctccagttgttctcatgtggacacacatgaccctgaacctactgctcaactcaaccatgacgattcaaaaaaaccacttttgctcaataataaccacagcacagagtccaatgccatgatccagaaaacagtggaacagccgatgcaggattgttgcttggggacaatactggagaagggacgcatgttggttctttgtgaggagcatagtgcaaagaagcttatccagtgcgtcgacttctggctatactacatagcctacttctgtggtgccactgttgggctagtgtacagcaacaacttggggcaaattgcacaatcatttcaccgggaatctcagctcaccatgcttcttgccgtctactcctcctgttccttctttggccgccttctctctgcacttccagacttccttcacaggaaggtttcatttgctcggacagggtggcttgcagctgcgttggttcccatgccaatggcgttcttcctaatgtggaaattgcatgatgtaaacactctggtagcaggaacagcgctaattggcctaagctcaggcttcatctttgctgcagcagtgtcagtgacctctgagctctttggaccaaacagcattggcatgaaccataacatcctcatcaccaacatccctcttggatcacttctctatggtcagattgctgccctagtgtatgatgcaaatggcctaaagatgtcagtaatagacaaccacaatggcatgattgacactatggtggtttgcatggggccaaagtgctactcaaccacattcttcgtgtggggttgtatcacattcctagggttggtgtcaagcataatcctattcttgagaacaagaacagcttacagtgctgctaatggtcagcaagttataaacaccacagccaagtttcgagttgacagaactccttga

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Protein seq

MEQQQQGRRRGAGWRRWAVLVATVWIQAVTGTNFDFSAYSSALKASLGVSQEALNYLATASDLGKALGWSSGLALIHLPLPAVLLLSAASGLAAYALQYALILDYLHLPYPLVFLICLVAGCSICWFNTVCFVLCIRSFSSSNRPLALSLSISFNGLSAAFYTLFANALSPFSPSVYLLLNAIVPLVVSLVALPAILLCHPHDGHLHVVPKHDKHIFLGLYLLAFITGIYLVIFGSFNTTNSTAWVVLTGAMVLLALPLIIPASSSCSHVDTHDPEPTAQLNHDDSKKPLLLNNNHSTESNAMIQKTVEQPMQDCCLGTILEKGRMLVLCEEHSAKKLIQCVDFWLYYIAYFCGATVGLVYSNNLGQIAQSFHRESQLTMLLAVYSSCSFFGRLLSALPDFLHRKVSFARTGWLAAALVPMPMAFFLMWKLHDVNTLVAGTALIGLSSGFIFAAAVSVTSELFGPNSIGMNHNILITNIPLGSLLYGQIAALVYDANGLKMSVIDNHNGMIDTMVVCMGPKCYSTTFFVWGCITFLGLVSSIILFLRTRTAYSAANGQQVINTTAKFRVDRTP

Function Protein NUCLEAR FUSION DEFECTIVE 4 [UniProtKB/Swiss-Prot:F4I9E1]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsGoSa_12g0000470 OsGoSa_12g0000470.01 Chr12 386913 395301 + NAM
CDS seq

atggagcagcagcagcaggggcggaggagaggcgcaggatggcggcgttgggcggtgctggtggcgacggtgtggatacaggcggtgacggggacaaacttcgacttctcggcctactcgtcggcgctcaaggcgtccctgggtgtctcgcaggaggcgctcaactacctggccaccgcctccgacctgggcaaggcgctgggctggtcgtcgggcctcgccctcatccacctccccctccccgccgtcctcctcctctccgccgcctccggcctcgccgcatacgccctccagtacgccctcatcctcgactacctccacctcccctacccgctcgtgttcttgatctgcctggtagcaggttgcagtatctgctggttcaacacagtatgctttgtgctctgcattcgcagtttctcctcgagcaatcgcccactggccctctccctctccataagtttcaatgggctaagtgctgcattctacaccctctttgccaatgccctctcccccttttccccatctgtatacctccttctcaatgcaattgtccctctcgttgtatctcttgttgcactgccagcaatactcctctgccacccacatgacggccacctccacgttgtgcccaagcatgacaaacatatctttcttggtctctacctcctcgcgttcatcactggcatatatctagtgatcttcggctctttcaacacaaccaactccactgcatgggtggtccttacaggtgccatggtcctcctcgccctccctctcatcatccctgcctcctccagttgttctcatgtggacacacatgaccctgaacctactgctcaactcaaccatgacgattcaaaaaaaccacttttgctcaataataaccacagcacagagtccaatgccatgatccagaaaacagtggaacagccgatgcaggattgttgcttggggacaatactggagaagggacgcatgttggttctttgtgaggagcatagtgcaaagaagcttatccagtgcgtcgacttctggctatactacatagcctacttctgtggtgccactgttgggctagtgtacagcaacaacttggggcaaattgcacaatcatttcaccgggaatctcagctcaccatgcttcttgccgtctactcctcctgttccttctttggccgccttctctctgcacttccagacttccttcacaggaaggtttcatttgctcggacagggtggcttgcagctgcgttggttcccatgccaatggcgttcttcctaatgtggaaattgcatgatgtaaacactctggtagcaggaacagcgctaattggcctaagctcaggcttcatctttgctgcagcagtgtcagtgacctctgagctctttggaccaaacagcattggcatgaaccataacatcctcatcaccaacatccctcttggatcacttctctatggtcagattgctgccctagtgtatgatgcaaatggcctaaagatgtcagtaatagacaaccacaatggcatgattgacactatggtggtttgcatggggccaaagtgctactcaaccacattcttcgtgtggggttgtatcacattcctagggttggtgtcaagcataatcctattcttgagaacaagaacagcttacagtgctgctaatggtcagcaagttataaacaccacagccaagtttcgagttgacagaactccttga

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Protein seq

MEQQQQGRRRGAGWRRWAVLVATVWIQAVTGTNFDFSAYSSALKASLGVSQEALNYLATASDLGKALGWSSGLALIHLPLPAVLLLSAASGLAAYALQYALILDYLHLPYPLVFLICLVAGCSICWFNTVCFVLCIRSFSSSNRPLALSLSISFNGLSAAFYTLFANALSPFSPSVYLLLNAIVPLVVSLVALPAILLCHPHDGHLHVVPKHDKHIFLGLYLLAFITGIYLVIFGSFNTTNSTAWVVLTGAMVLLALPLIIPASSSCSHVDTHDPEPTAQLNHDDSKKPLLLNNNHSTESNAMIQKTVEQPMQDCCLGTILEKGRMLVLCEEHSAKKLIQCVDFWLYYIAYFCGATVGLVYSNNLGQIAQSFHRESQLTMLLAVYSSCSFFGRLLSALPDFLHRKVSFARTGWLAAALVPMPMAFFLMWKLHDVNTLVAGTALIGLSSGFIFAAAVSVTSELFGPNSIGMNHNILITNIPLGSLLYGQIAALVYDANGLKMSVIDNHNGMIDTMVVCMGPKCYSTTFFVWGCITFLGLVSSIILFLRTRTAYSAANGQQVINTTAKFRVDRTP

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 5.453961 0.0 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_12g0106500 SBH 1.362041 2.335844 0.000000
Nipponbare | IRGSP 1.0 | MSU LOC_Os12g01570 SBH 1.778235 1.755238 0.119757
Nipponbare | IRGSP 1.0 | RAP-db Os12g0106500 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_12g0000350 SBH 0.272652 1.256769 1.678289
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_12g0000530 SBH 0.721760 0.000000 1.028065
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_12g0000500 SBH 0.572520 2.659231 1.440126
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_12g0000370 SBH 0.111275 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_12g0000470 RBH 6.525149 4.809294 4.907085
Minghui 63 | MH63RS3 | HZAU OsMH63_12G0005300 RBH 2.7424815 1.8662285 2.1333545
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_12g0000430 RBH 0.141299 0.000000 0.644152
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_12G0005400 SBH 3.810845 1.2666475 4.4554885
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_12g0000360 SBH 0.374808 0.223949 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_12g0000470 RBH 1.121898 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_11g0000510 RBH 15.435676 0.000000 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_12g0000470 SBH 0.400570 0.0 0.355909
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_11g0000510 SBH 0.362789 0.927350 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_11G000520 SBH 0.454781 0.352679 1.694811
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_12g0000510 RBH 2.482427 0.0 0.266991
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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