Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_11g0022870 | OGI:11075910 | 16/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr11:29439219-29444682 | ||||||||
| Gene Symbol | RLCK344, OsRLCK344, - | ||||||||||
| DNA seq | ctacccgtcgcaacgggcgagctcgagcgccttctcgaggttggccacgacttccgaaatgggcggccgctcctcccactgcagcagcaggcagcgtactgccatctgcgccaccagttccgctgcctcggtggtggctccgctgccggccgcctgtccagcaccttccatagcttccccgcctcgattagtggcagcgcgaaggacaccaatccgaggcccccaaactcatactgctttcgccactcatgccattcttctattgtcttcccatcttcttctcgttcactctcctccttgtcctcttccgtgttctttccctcttgctcacattcttctctcttctcctcttcccattcttctttagacaaactaggaaggtggcccgcgcggatgcgcgggcattatattattgaaagataagattattgtttgttcgaaaattttgtctcataaattaagggcaaactaatgtttggataatgttattttataataatttaagggttctatttttcttaaagcatcttaaaaaaaccattcacaaacttttgagtaggagatggattaagtacttatgacttttgaatcatgttttttttttctcgagtaaataagaaactattgcaagttaattattatacaatccatttatagagcaagatacttaaaattcttatgattaaatcatctcatgaagacgcatgatatagtaagaacgggaggaaagcgcatgcatggaaaaaaaaagaaagggaaaaatgaaaaaagggagaggaagcatacgtacccacgtacataggtgcgtacctatgccccgggaggagaggtggaacctcgtactatctagtttgttttaggatcaatttaatctaatggtttataatattggacataccgatttaagtgaaaatcaaataatagatattttgcttttttttctttgaatttttaatagttgctttaatttattagagcaccacgtagcagtttgagagcattttaagaaattttaaaggacttaacacatgtaattagaatattaaccacataatatatatgcatggggcatatggtattatttattgcagcttcgtccatgtttatatacatctagagagaaattaattatgtggctagcaagccattagatgtctaattaatagcaattaattttgacacctatttacagttgttcatagtagctcttacatatttatcttacgactttgattatctgttgatccccaatttactgatcaccatgactcacatgaaaaaaacatgtactacttaggatttagaatagcttatttatatgatagctatttgagggtacaattgaatgaattgacttctaaaaagataaactgttgtttaaaaaagacactatttagaaacttggaaagcgtgcaaacgaaaacccaaactatagaattgggaaaaaaaagagggttaaactctcttatagcacgcttgtcttagtaaaagttctattaatattcgttaatattatgctcacatttataacataatgatttctttcacctgtacgaacaaatagtacaaaatccaaatatgacataacacaatacattataattattctataatcaactcttagtttcaggttaaacagagctaagtgttggaaaaaattcaatccgcggtgcttaattattctctcacggcatcacacctttaatttactttacatgttattaataaaattaatcaactccatatatgacttgatatgtggcaaagtggtagcgtagcggcggtcgtaatcaccttagatgccttagacacgacgctttgtcacgcgtacaaaaggcaaaagtgcagacgtgcattgtgtagcgggccaaaaaagagaacttcgaaagctttatttataagaaaacaatagatccgatgatttaaataatgggtccaccggttctagtgtaagtgtaaattagttaatatagattttaaattgttaatttaatgggtacataatataatataatagtgtagactttattttgaaacaatgcattattggagaataatagtccaatgtaataaaaaataaatccagtgatttaaataatgagtccatcggcttaaatgcacgtacaaattagttaatatagatctcaaattgtttatttgataggtacacaatataattatgtaaactttatttttaaatagtgcattattggaaaataatagcacaaagtaaaccctcttccaacactaatactattaagactaaatcagtctattgggaactaatgagtacaccggtttaagtggaaattattaattttatgggtaacatataatggtctaaattttactttttaaaattgtagagctaatttagttacatgcaagttgtacgatggtagattctatatttgtaaaattatgattatttaaaaaatatatatccatatataaatagaaaaaaagaagaaaaaaggggaaaaaataagcgaaagaagcgtacgtacacatacgtatgtatacaatataatgtgtgaactttattttaaaatagtgcattatttaaaaataatagtacaaagtaatgagtacaccggtttaaatggaaattatattacattattaatttaatgggtaacatataatggtgtaaattttattttcaaaaattgtagagctaatttagttacctatgagttgtatgatggtagattctctgtttgtaaaattatgattatttaaaaaatatatatatccattatataaatggaaaaaagaaaaaaaataagcgaaagaagcatacgtacacgtacatatgtacacatataactgtgtaaactttattttaaaatagtgtattatttaaacataatagtacactagtttaaatgaaaattatcttacattattattaatttaatgagtaacagataatggtgtaaattttattttcaaaaattgtagagataatttagttacccctgagttgtatgatggtagattttttgtttctaaaatataattatttaaaatatatatatatattatataaatggaaaaagtaaaaaaaggaaaaaaagaattgaaagaagaagcgtacgcatgaattatgattatttaaaaatatatatatatctattatataaatggaaaaaagaagaaaaaatgaaaaaaaaagagaaaggaaagaagaagcgtacgtacttatataaatgaaaaaaagaagaaaaactgaaaaaaaacagagaaatgaaagaatgtacgtacgtatatatctagggaggaggagaggtggggcccatagtatttggtttggtttattttaagattaatttcatctaacggtgtataatattggacccaccaatttaagtgaaaattaaggggtagatgttttgcttttttcttagaatttctaggattttctctaatttattagagtgcacttgagagcgtttgtaggaagtttaatggacttttagtatataatagatagatagatagatagatagatatgttttcttccccgtcaatacctccagcatcacaacacccaaactgtagatgtcggtcatcagtatagttggccataaggcccgaggcccgaaggcccggcccacggcacgcctttttggcccggcccaagcacggcacggcccgacttgggttgggcccgtgctggcccggcccgaccgtcgggccgtgcctgggcctccccaccggcacgctgggctggcccggcacggtcgggccggcccggcacgatgggctggcaggccaggcccggtacataaagtatagggactaaaaatagacatataaatgtaactgtctaaaggatagggaccttaaatagacttattttagctatttatatacccccgcccaaagaagagggaggtaaaatagactttttgtagctgtacatatgttacagcccaataggagggaggaaatttagacttattctgagaaaaagcacaacggcccatcgtgccttcgggccggcccggcacggcccgaggcgtgttgggccgtgcctgggccgtgagtgcggcacgtgggctggcacggcacggcccggtgcgtcggtcgggccgtgccggcccgacaagcctcggcccaggcacggccgggcctgggccgtgccgtgccgggcggcccacatggccaactatagtcatcaggttcagattgcctgccataatgtgttccggggccacgtatccatcatggcctgggccttcccagatgagtgcgatcccgaagtccgtcaagcgcggcgcccagttgccatcgagaaggatgttggacggcttgacgtcacggtggataatcggctgctcaccgcaggactgcaggtactcgatggcccgcgacacacccagcagtatctcgatgcgcatcttccaggaagtcaccaccggcggcgacaacgacgacgacaacgttgggccgtgcaggtggtgatccagcgagccgttctccatgtactcaaagacgagtagaagctttttgtcctccttttccttctggaacggccgcaggaggtggcgccgcttctcgaccagcacactacagtagccatatagtggaacaatgtgcttgtagcggatgggggagaggactgtgatctctctcatgaactcctccttagcctgaactgggtagtgcttgatggccacctcccgcccatctggaagccttcccatgtacaccttggtgaagccaccttcatcgatcttgctgtcaggggcaaagttgttgcttgcctttgcgagctccttgaaactaaactccatggtgttccttccaatacatcttagcagcatcctagtatagagatgtgcacataacggaagaagagaaaaattagagttcagttctaagcttcccttcggagccaagtacaaagtgcaattgaaagtttgaggttatattatgtatgcatttgaatgtgtacctgggaggctgggacggggatttgaggcatggagataggagacacagatggcccggtcatgtcattcggaagcaggatgttgtagattcgatcgacacggcgagtgatgtccatgtggctgataacagggaagaggaggaggtaggagtcgatcctgctctgaacatctctgaacttgtcagcctgccttccggccatcaccaacctgtacacggcgctcttggcctggcatgccatcacaagctcgtgcgccttccggagagtgtcgtcgagcccggtcagcggccgccggatctcaggccgccgcagcacatcgggatcctgcaggtgctgcagcagctcggcgatcgtgaagacgcggcgggcgagctgctcgcactccttcttgttctgctgagccgtcatcgccgcctgcatgatcatggtgatgaggccgccgatgtccgccccgaccagctgcgccaccgtcgccgcctgacccagcccgccccacagtgccat
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| CDS seq | atggcactgtggggcgggctgggtcaggcggcgacggtggcgcagctggtcggggcggacatcggcggcctcatcaccatgatcatgcaggcggcgatgacggctcagcagaacaagaaggagtgcgagcagctcgcccgccgcgtcttcacgatcgccgagctgctgcagcacctgcaggatcccgatgtgctgcggcggcctgagatccggcggccgctgaccgggctcgacgacactctccggaaggcgcacgagcttgtgatggcatgccaggccaagagcgccgtgtacaggttggtgatggccggaaggcaggctgacaagttcagagatgttcagagcaggatcgactcctacctcctcctcttccctgttatcagccacatggacatcactcgccgtgtcgatcgaatctacaacatcctgcttccgaatgacatgaccgggccatctgtgtctcctatctccatgcctcaaatccccgtcccagcctcccagggaagcttagaactgaactctaatttttctcttcttccgttatgtgcacatctctatactaggatgctgctaagatgtattggaaggaacaccatggagtttagtttcaaggagctcgcaaaggcaagcaacaactttgcccctgacagcaagatcgatgaaggtggcttcaccaaggtgtacatgggaaggcttccagatgggcgggaggtggccatcaagcactacccagttcaggctaaggaggagttcatgagagagatcacagtcctctcccccatccgctacaagcacattgttccactatatggctactgtagtgtgctggtcgagaagcggcgccacctcctgcggccgttccagaaggaaaaggaggacaaaaagcttctactcgtctttgagtacatggagaacggctcgctggatcaccacctgcacggcccaacgttgtcgtcgtcgttgtcgccgccggtggtgacttcctggaagatgcgcatcgagatactgctgggtaacacggaagaggacaaggaggagagtgaacgagaagaagatgggaagacaatagaagaatggcatgagtggcgaaagcagtatgagtttgggggcctcggattggtgtccttcgcgctgccactaatcgaggcggggaagctatggaagtgggaggagcggccgcccatttcggaagtcgtggccaacctcgagaaggcgctcgagctcgcccgttgcgacgggtag
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| Protein seq | MALWGGLGQAATVAQLVGADIGGLITMIMQAAMTAQQNKKECEQLARRVFTIAELLQHLQDPDVLRRPEIRRPLTGLDDTLRKAHELVMACQAKSAVYRLVMAGRQADKFRDVQSRIDSYLLLFPVISHMDITRRVDRIYNILLPNDMTGPSVSPISMPQIPVPASQGSLELNSNFSLLPLCAHLYTRMLLRCIGRNTMEFSFKELAKASNNFAPDSKIDEGGFTKVYMGRLPDGREVAIKHYPVQAKEEFMREITVLSPIRYKHIVPLYGYCSVLVEKRRHLLRPFQKEKEDKKLLLVFEYMENGSLDHHLHGPTLSSSLSPPVVTSWKMRIEILLGNTEEDKEESEREEDGKTIEEWHEWRKQYEFGGLGLVSFALPLIEAGKLWKWEERPPISEVVANLEKALELARCDG |
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| Function | Cell number regulator 13 [UniProtKB/Swiss-Prot:B6SJQ0] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_11g0022870 | OsGoSa_11g0022870.01 | Chr11 | 29439219 | 29444682 | - | NAM | ||
| CDS seq | atggcactgtggggcgggctgggtcaggcggcgacggtggcgcagctggtcggggcggacatcggcggcctcatcaccatgatcatgcaggcggcgatgacggctcagcagaacaagaaggagtgcgagcagctcgcccgccgcgtcttcacgatcgccgagctgctgcagcacctgcaggatcccgatgtgctgcggcggcctgagatccggcggccgctgaccgggctcgacgacactctccggaaggcgcacgagcttgtgatggcatgccaggccaagagcgccgtgtacaggttggtgatggccggaaggcaggctgacaagttcagagatgttcagagcaggatcgactcctacctcctcctcttccctgttatcagccacatggacatcactcgccgtgtcgatcgaatctacaacatcctgcttccgaatgacatgaccgggccatctgtgtctcctatctccatgcctcaaatccccgtcccagcctcccagggaagcttagaactgaactctaatttttctcttcttccgttatgtgcacatctctatactaggatgctgctaagatgtattggaaggaacaccatggagtttagtttcaaggagctcgcaaaggcaagcaacaactttgcccctgacagcaagatcgatgaaggtggcttcaccaaggtgtacatgggaaggcttccagatgggcgggaggtggccatcaagcactacccagttcaggctaaggaggagttcatgagagagatcacagtcctctcccccatccgctacaagcacattgttccactatatggctactgtagtgtgctggtcgagaagcggcgccacctcctgcggccgttccagaaggaaaaggaggacaaaaagcttctactcgtctttgagtacatggagaacggctcgctggatcaccacctgcacggcccaacgttgtcgtcgtcgttgtcgccgccggtggtgacttcctggaagatgcgcatcgagatactgctgggtaacacggaagaggacaaggaggagagtgaacgagaagaagatgggaagacaatagaagaatggcatgagtggcgaaagcagtatgagtttgggggcctcggattggtgtccttcgcgctgccactaatcgaggcggggaagctatggaagtgggaggagcggccgcccatttcggaagtcgtggccaacctcgagaaggcgctcgagctcgcccgttgcgacgggtag
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| Protein seq | MALWGGLGQAATVAQLVGADIGGLITMIMQAAMTAQQNKKECEQLARRVFTIAELLQHLQDPDVLRRPEIRRPLTGLDDTLRKAHELVMACQAKSAVYRLVMAGRQADKFRDVQSRIDSYLLLFPVISHMDITRRVDRIYNILLPNDMTGPSVSPISMPQIPVPASQGSLELNSNFSLLPLCAHLYTRMLLRCIGRNTMEFSFKELAKASNNFAPDSKIDEGGFTKVYMGRLPDGREVAIKHYPVQAKEEFMREITVLSPIRYKHIVPLYGYCSVLVEKRRHLLRPFQKEKEDKKLLLVFEYMENGSLDHHLHGPTLSSSLSPPVVTSWKMRIEILLGNTEEDKEESEREEDGKTIEEWHEWRKQYEFGGLGLVSFALPLIEAGKLWKWEERPPISEVVANLEKALELARCDG
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0664133 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g44460 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0664133 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0022930 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0022970 | RBH | 0.0 | 0.839027 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0022720 | SBH | 0.000000 | 6.946922 | 0.193026 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0022410 | SBH | 0.0 | 0.709805 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0022670 | SBH | 0.0 | 0.000000 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0402900 | SBH | 0.219313 | 7.317272 | 0.559177 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0023530 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0419600 | RBH | 0 | 0 | 0.0053005 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0023060 | RBH | 0.0 | 0.157806 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0023240 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0022930 | SBH | 4.118145 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0022650 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0022450 | SBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G022750 | RBH | 0.0 | 0.613823 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0023190 | RBH | 0.0 | 0.0 | 0.0 |
