Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsGoSa_10g0013990 | OGI:10040130 | 16/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr10:19246763-19249771 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | ttacttgcttgctgatttgcatctgaagagtgctttaatgtgtgcaacttttgcataacttcttcctatctggtcaacaaaacgaaaaacaaaaactcttaatggcataagaaaaatcagagctccaaaccaaagccaaaacccaaaaacgacgccaataattacagagtagtataaggacatatcaaacttttcatggtcttcatttttctcatccagtgtagatgcatgacaggctatgcttaaagggaagccgcaaagacccaaattattgccatagattgatggatccacaagcgtctgaagttgacttccagtgggtatctcaccccataagcgattgttcgagagatttaacatgctgagagataacaaatttgaaatgcttggaggaataacacctgaaagttcattcgatgagaggtcaaggtactccaagagtttcaaactgcctattcttccaggaatactgcctgataaagtatttcttgacaagtttaaaaacaggagaccctgaagatatgtaagctcttctgggatgtcctcagtaagtgaattacttgataaatcgatacctactacagaatcaactgttctctgaaaaatttgctcacggcccttccaaaatatattaactctgtctccatactcatcttggttacgattgttactgggttctgtcctccgtgaaaccacagaaaaatgttgtacttgaagctgcaagggggtatcaagcctattaaaggattctgtttcagatataatttcagtcagaaacatggatgttaagttgccaaaagaattcggaatgtgtccagtaaaactgttcttggacatgtcaagtaattgtaaccgagaaagttgggataactctgaaggaatatctccactgaaattgtttgattgaagactcagaaatcttaccagaggaacactagttccaatccaaatgggtatatgaccaaagaacatattactccctagatcaagtgcgatcaagcttctgcattgctttatgactgaaggaaaaactcccctgagatcattattcgccagataaagcgtctcaagaggaatatttgagcttgttgtggaagagatttctccagaaaaaccattgttcgacaaatctagaaatttcaaagctggcaaactccacaagttttcaggtagattaccggtaaaccgattatatgacaagtctaggtaggtcaggcttgggtggtcactgaatgcctctgaaatgtcaccggtgaagctgttattggcaagacttacctggtacaaccttgtgcagtttctaaagcatgctggcaaattaccagtgaagttgttgttgctcgctgtgaagttctgcaatgcaaaaccctcgcaaatattctgcgggagcttaccagagaagaagttgtttgcgaggctcacatcgatgaggcgcactcctcttccgaggtcagaggggatgatgccactgagcttgttgccgaataaatcgatgtaattgagattccggagcaaggtcatggtgggaggcagttcgccgtccagttggttgctgttcaggttcaacatttgcaacgatgtcatgttgccaatctctggagggatcgtgccgctgagctcgttgaagaacaatgccaatctcgtcagctgtgagagcctcccgatcgacttggggatcgatcctgtgagccagttaactgataaatctagctctgaaagttcaaccaactcacctagctctgcagggatagagccagtgaagttgttgctgaacaggtacaggtattgaagtttcttcgccttgccgagctccggcggaatcttcccggtgaacgagttgctctgcacttggaaggatatgagctccggccagctcgtgaacagttctggtgggatgtcgccggtgaggatgttgcgagcaatcccgaagtaccgcattgcccgcatcccggcgaactccggcggcaagccaccggtgagctggttcatggatagctccagaaaagtgagattcctaagattgcctagctgcgacggcagagaggaaacaagcccagcgttcttgatgtcgagccgttgcagcatgtggagccggccaagaaccggcgggatcggcccgccgagctggttgtcgccgagttcaagaatcctcaactgcggcatcgacccgaggaactccgggacgccgccggtgagattgttggcggccatccgcaggtcctgcagcttcgtcaacttCccgagcgacgccggaatcgggccggagaacgcattgatggacaggttgaggtacctcagattcgggagcttctccggcagcgtgtccggtatcttcccgaacagagtgttctgcgacaggtcgaggtaggtgacgttgccgctcttgaggatgaactccgggaagctgccattgaaggagttgaggtagagcgacatgaacgtgacggtgggcatcggcgagaacttggcgaagtcctcgtcggtgaggtagtttgctcccaggtcgaagtgggcaaccttGgggaggcggctgagctggtgcgggatggcgccgacgaggttgttgttgtagaggcggaggtcgacgaggccggagaggtcgccgagctgcggcgggatggagtcgctgaagccattgttgccgaggtcgagcgaggccagcgagcggagccgcgagatgctcgccgggatggcgccggtgaagttgttcccgttgaggtcgagctcggccaacgccgggagcgccgcgaagtcgagcgcgtcgaggccgccgccaaggccggcgcccctgagccggagcgaagtgacgcgggcgccgccggcggcggcgtcgcaggccacgccgcgccacgcgcacaccggcgcggcgcggctccacccggacagcgcggccgcgccgtcctgcaggccggccttccacgccagcagcgcgtcggcctccgtcgccgcatccgccgcggcgaccaccaccagcagcagcaggcggagggcgtcgtgtctccgcggcat
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CDS seq | atgccgcggagacacgacgccctccgcctgctgctgctggtggtggtcgccgcggcggatgcggcgacggaggccgacgcgctgctggcgtggaaggccggcctgcaggacggcgcggccgcgctgtccgggtggagccgcgccgcgccggtgtgcgcgtggcgcggcgtggcctgcgacgccgccgccggcggcgcccgcgtcacttcgctccggctcaggggcgccggccttggcggcggcctcgacgcgctcgacttcgcggcgctcccggcgttggccgagctcgacctcaacgggaacaacttcaccggcgccatcccggcgagcatctcgcggctccgctcgctggcctcgctcgacctcggcaacaatggcttcagcgactccatcccgccgcagctcggcgacctctccggcctcgtcgacctccgcctctacaacaacaacctcgtcggcgccatcccgcaccagctcagccgcctcccCaaggttgcccacttcgacctgggagcaaactacctcaccgacgaggacttcgccaagttctcgccgatgcccaccgtcacgttcatgtcgctctacctcaactccttcaatggcagcttcccggagttcatcctcaagagcggcaacgtcacctacctcgacctgtcgcagaacactctgttcgggaagataccggacacgctgccggagaagctcccgaatctgaggtacctcaacctgtccatcaatgcgttctccggcccgattccggcgtcgctcggGaagttgacgaagctgcaggacctgcggatggccgccaacaatctcaccggcggcgtcccggagttcctcgggtcgatgccgcagttgaggattcttgaactcggcgacaaccagctcggcgggccgatcccgccggttcttggccggctccacatgctgcaacggctcgacatcaagaacgctgggcttgtttcctctctgccgtcgcagctaggcaatcttaggaatctcacttttctggagctatccatgaaccagctcaccggtggcttgccgccggagttcgccgggatgcgggcaatgcggtacttcgggattgctcgcaacatcctcaccggcgacatcccaccagaactgttcacgagctggccggagctcatatccttccaagtgcagagcaactcgttcaccgggaagattccgccggagctcggcaaggcgaagaaacttcaatacctgtacctgttcagcaacaacttcactggctctatccctgcagagctaggtgagttggttgaactttcagagctagatttatcagttaactggctcacaggatcgatccccaagtcgatcgggaggctctcacagctgacgagattggcattgttcttcaacgagctcagcggcacgatccctccagagattggcaacatgacatcgttgcaaatgttgaacctgaacagcaaccaactggacggcgaactgcctcccaccatgaccttgctccggaatctcaattacatcgatttattcggcaacaagctcagtggcatcatcccctctgacctcggaagaggagtgcgcctcatcgatgtgagcctcgcaaacaacttcttctctggtaagctcccgcagaatatttgcgagggttttgcattgcagaacttcacagcgagcaacaacaacttcactggtaatttgccagcatgctttagaaactgcacaaggttgtaccaggtaagtcttgccaataacagcttcaccggtgacatttcagaggcattcagtgaccacccaagcctgacctacctagacttgtcatataatcggtttaccggtaatctacctgaaaacttgtggagtttgccagctttgaaatttctagatttgtcgaacaatggtttttctggagaaatctcttccacaacaagctcaaatattcctcttgagacgctttatctggcgaataatgatctcaggggagtttttccttcagtcataaagcaatgcagaagcttgatcgcacttgatctagggagtaatatgttctttggtcatatacccatttggattggaactagtgttcctctggtaagatttctgagtcttcaatcaaacaatttcagtggagatattccttcagagttatcccaactttctcggttacaattacttgacatgtccaagaacagttttactggacacattccgaattcttttggcaacttaacatccatgtttctgactgaaattatatctgaaacagaatcctttaataggcttgatacccccttgcagcttcaagtacaacatttttctgtggtttcacggaggacagaacccagtaacaatcgtaaccaagatgagtatggagacagagttaatatattttggaagggccgtgagcaaatttttcagagaacagttgattctgtagtaggtatcgatttatcaagtaattcacttactgaggacatcccagaagagcttacatatcttcagggtctcctgtttttaaacttgtcaagaaatactttatcaggcagtattcctggaagaataggcagtttgaaactcttggagtaccttgacctctcatcgaatgaactttcaggtgttattcctccaagcatttcaaatttgttatctctcagcatgttaaatctctcgaacaatcgcttatggggtgagatacccactggaagtcaacttcagacgcttgtggatccatcaatctatggcaataatttgggtctttgcggcttccctttaagcatagcctgtcatgcatctacactggatgagaaaaatgaagaccatgaaaagtttgatatgtccttatactactctgtaattattggcgtcgtttttgggttttggctttggtttggagctctgatttttcttatgccattaagagtttttgtttttcgttttgttgaccagataggaagaagttatgcaaaagttgcacacattaaagcactcttcagatgcaaatcagcaagcaagtaa
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Protein seq | MPRRHDALRLLLLVVVAAADAATEADALLAWKAGLQDGAAALSGWSRAAPVCAWRGVACDAAAGGARVTSLRLRGAGLGGGLDALDFAALPALAELDLNGNNFTGAIPASISRLRSLASLDLGNNGFSDSIPPQLGDLSGLVDLRLYNNNLVGAIPHQLSRLPKVAHFDLGANYLTDEDFAKFSPMPTVTFMSLYLNSFNGSFPEFILKSGNVTYLDLSQNTLFGKIPDTLPEKLPNLRYLNLSINAFSGPIPASLGKLTKLQDLRMAANNLTGGVPEFLGSMPQLRILELGDNQLGGPIPPVLGRLHMLQRLDIKNAGLVSSLPSQLGNLRNLTFLELSMNQLTGGLPPEFAGMRAMRYFGIARNILTGDIPPELFTSWPELISFQVQSNSFTGKIPPELGKAKKLQYLYLFSNNFTGSIPAELGELVELSELDLSVNWLTGSIPKSIGRLSQLTRLALFFNELSGTIPPEIGNMTSLQMLNLNSNQLDGELPPTMTLLRNLNYIDLFGNKLSGIIPSDLGRGVRLIDVSLANNFFSGKLPQNICEGFALQNFTASNNNFTGNLPACFRNCTRLYQVSLANNSFTGDISEAFSDHPSLTYLDLSYNRFTGNLPENLWSLPALKFLDLSNNGFSGEISSTTSSNIPLETLYLANNDLRGVFPSVIKQCRSLIALDLGSNMFFGHIPIWIGTSVPLVRFLSLQSNNFSGDIPSELSQLSRLQLLDMSKNSFTGHIPNSFGNLTSMFLTEIISETESFNRLDTPLQLQVQHFSVVSRRTEPSNNRNQDEYGDRVNIFWKGREQIFQRTVDSVVGIDLSSNSLTEDIPEELTYLQGLLFLNLSRNTLSGSIPGRIGSLKLLEYLDLSSNELSGVIPPSISNLLSLSMLNLSNNRLWGEIPTGSQLQTLVDPSIYGNNLGLCGFPLSIACHASTLDEKNEDHEKFDMSLYYSVIIGVVFGFWLWFGALIFLMPLRVFVFRFVDQIGRSYAKVAHIKALFRCKSASK |
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Function | Receptor-like protein EIX2 [UniProtKB/Swiss-Prot:Q6JN46] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsGoSa_10g0013990 | OsGoSa_10g0013990.01 | Chr10 | 19246763 | 19249771 | - | NAM | ||
CDS seq | atgccgcggagacacgacgccctccgcctgctgctgctggtggtggtcgccgcggcggatgcggcgacggaggccgacgcgctgctggcgtggaaggccggcctgcaggacggcgcggccgcgctgtccgggtggagccgcgccgcgccggtgtgcgcgtggcgcggcgtggcctgcgacgccgccgccggcggcgcccgcgtcacttcgctccggctcaggggcgccggccttggcggcggcctcgacgcgctcgacttcgcggcgctcccggcgttggccgagctcgacctcaacgggaacaacttcaccggcgccatcccggcgagcatctcgcggctccgctcgctggcctcgctcgacctcggcaacaatggcttcagcgactccatcccgccgcagctcggcgacctctccggcctcgtcgacctccgcctctacaacaacaacctcgtcggcgccatcccgcaccagctcagccgcctcccCaaggttgcccacttcgacctgggagcaaactacctcaccgacgaggacttcgccaagttctcgccgatgcccaccgtcacgttcatgtcgctctacctcaactccttcaatggcagcttcccggagttcatcctcaagagcggcaacgtcacctacctcgacctgtcgcagaacactctgttcgggaagataccggacacgctgccggagaagctcccgaatctgaggtacctcaacctgtccatcaatgcgttctccggcccgattccggcgtcgctcggGaagttgacgaagctgcaggacctgcggatggccgccaacaatctcaccggcggcgtcccggagttcctcgggtcgatgccgcagttgaggattcttgaactcggcgacaaccagctcggcgggccgatcccgccggttcttggccggctccacatgctgcaacggctcgacatcaagaacgctgggcttgtttcctctctgccgtcgcagctaggcaatcttaggaatctcacttttctggagctatccatgaaccagctcaccggtggcttgccgccggagttcgccgggatgcgggcaatgcggtacttcgggattgctcgcaacatcctcaccggcgacatcccaccagaactgttcacgagctggccggagctcatatccttccaagtgcagagcaactcgttcaccgggaagattccgccggagctcggcaaggcgaagaaacttcaatacctgtacctgttcagcaacaacttcactggctctatccctgcagagctaggtgagttggttgaactttcagagctagatttatcagttaactggctcacaggatcgatccccaagtcgatcgggaggctctcacagctgacgagattggcattgttcttcaacgagctcagcggcacgatccctccagagattggcaacatgacatcgttgcaaatgttgaacctgaacagcaaccaactggacggcgaactgcctcccaccatgaccttgctccggaatctcaattacatcgatttattcggcaacaagctcagtggcatcatcccctctgacctcggaagaggagtgcgcctcatcgatgtgagcctcgcaaacaacttcttctctggtaagctcccgcagaatatttgcgagggttttgcattgcagaacttcacagcgagcaacaacaacttcactggtaatttgccagcatgctttagaaactgcacaaggttgtaccaggtaagtcttgccaataacagcttcaccggtgacatttcagaggcattcagtgaccacccaagcctgacctacctagacttgtcatataatcggtttaccggtaatctacctgaaaacttgtggagtttgccagctttgaaatttctagatttgtcgaacaatggtttttctggagaaatctcttccacaacaagctcaaatattcctcttgagacgctttatctggcgaataatgatctcaggggagtttttccttcagtcataaagcaatgcagaagcttgatcgcacttgatctagggagtaatatgttctttggtcatatacccatttggattggaactagtgttcctctggtaagatttctgagtcttcaatcaaacaatttcagtggagatattccttcagagttatcccaactttctcggttacaattacttgacatgtccaagaacagttttactggacacattccgaattcttttggcaacttaacatccatgtttctgactgaaattatatctgaaacagaatcctttaataggcttgatacccccttgcagcttcaagtacaacatttttctgtggtttcacggaggacagaacccagtaacaatcgtaaccaagatgagtatggagacagagttaatatattttggaagggccgtgagcaaatttttcagagaacagttgattctgtagtaggtatcgatttatcaagtaattcacttactgaggacatcccagaagagcttacatatcttcagggtctcctgtttttaaacttgtcaagaaatactttatcaggcagtattcctggaagaataggcagtttgaaactcttggagtaccttgacctctcatcgaatgaactttcaggtgttattcctccaagcatttcaaatttgttatctctcagcatgttaaatctctcgaacaatcgcttatggggtgagatacccactggaagtcaacttcagacgcttgtggatccatcaatctatggcaataatttgggtctttgcggcttccctttaagcatagcctgtcatgcatctacactggatgagaaaaatgaagaccatgaaaagtttgatatgtccttatactactctgtaattattggcgtcgtttttgggttttggctttggtttggagctctgatttttcttatgccattaagagtttttgtttttcgttttgttgaccagataggaagaagttatgcaaaagttgcacacattaaagcactcttcagatgcaaatcagcaagcaagtaa
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Protein seq | MPRRHDALRLLLLVVVAAADAATEADALLAWKAGLQDGAAALSGWSRAAPVCAWRGVACDAAAGGARVTSLRLRGAGLGGGLDALDFAALPALAELDLNGNNFTGAIPASISRLRSLASLDLGNNGFSDSIPPQLGDLSGLVDLRLYNNNLVGAIPHQLSRLPKVAHFDLGANYLTDEDFAKFSPMPTVTFMSLYLNSFNGSFPEFILKSGNVTYLDLSQNTLFGKIPDTLPEKLPNLRYLNLSINAFSGPIPASLGKLTKLQDLRMAANNLTGGVPEFLGSMPQLRILELGDNQLGGPIPPVLGRLHMLQRLDIKNAGLVSSLPSQLGNLRNLTFLELSMNQLTGGLPPEFAGMRAMRYFGIARNILTGDIPPELFTSWPELISFQVQSNSFTGKIPPELGKAKKLQYLYLFSNNFTGSIPAELGELVELSELDLSVNWLTGSIPKSIGRLSQLTRLALFFNELSGTIPPEIGNMTSLQMLNLNSNQLDGELPPTMTLLRNLNYIDLFGNKLSGIIPSDLGRGVRLIDVSLANNFFSGKLPQNICEGFALQNFTASNNNFTGNLPACFRNCTRLYQVSLANNSFTGDISEAFSDHPSLTYLDLSYNRFTGNLPENLWSLPALKFLDLSNNGFSGEISSTTSSNIPLETLYLANNDLRGVFPSVIKQCRSLIALDLGSNMFFGHIPIWIGTSVPLVRFLSLQSNNFSGDIPSELSQLSRLQLLDMSKNSFTGHIPNSFGNLTSMFLTEIISETESFNRLDTPLQLQVQHFSVVSRRTEPSNNRNQDEYGDRVNIFWKGREQIFQRTVDSVVGIDLSSNSLTEDIPEELTYLQGLLFLNLSRNTLSGSIPGRIGSLKLLEYLDLSSNELSGVIPPSISNLLSLSMLNLSNNRLWGEIPTGSQLQTLVDPSIYGNNLGLCGFPLSIACHASTLDEKNEDHEKFDMSLYYSVIIGVVFGFWLWFGALIFLMPLRVFVFRFVDQIGRSYAKVAHIKALFRCKSASK
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.0 | 3.161577 | None |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0468800 | SBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g33130 | RBH | 0.532318 | 0.281205 | 0.018365 |
Nipponbare | IRGSP 1.0 | RAP-db | Os10g0468800 | SBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0014030 | SBH | 0.062084 | 0.0 | 0.621771 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0014240 | SBH | 0.002502 | 0.249035 | 0.624191 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0013770 | RBH | 0.0 | 3.617634 | 0.219821 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0014070 | RBH | 0.0 | 0.136633 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0013970 | RBH | 0.0 | 0.000000 | 0.000000 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0288800 | SBH | 0.137182 | 1.9143645 | 0.8113775 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0013990 | RBH | 0.0 | 0.158524 | 0.245508 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0310200 | RBH | 0.1353445 | 0.0214225 | 0.157573 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0013710 | SBH | 0.014096 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0013590 | SBH | 0.042996 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0003410 | SBH | 0.845317 | 38.290535 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0013700 | RBH | 0.0 | 0.0 | 0.076431 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0014240 | RBH | 0.0 | 1.608287 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G013910 | RBH | 0.0 | 1.703322 | 0.154869 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0013850 | RBH | 0.0 | 5.245385 | 0.637683 |