Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_10g0013770 | OGI:10040130 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr10:17808372-17811383 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ttacttgcttgctgatttgcatctgaagagtgctttaatgtgtgcaacttttgcataacttcttcctatctggtcaacaaaacgaaaaacaaaaactcttaatggcataagaaaaatcagagctccaaaccaaagccaaaacccaaaaacgacgccaataattacagagtagtataaggacatatcaaacttttcatggtcttcatttttctcatccagtgtagatgcatgacaggctatgcttaaagggaagccgcaaagacccaaattattgccatagattgatggatccacaagcgtctgaagttgacttccagtgggtatctcaccccataagcgattgttcgagagatttaacatgctgagagataacaaatttgaaatgcttggaggaataacacctgaaagttcattcgatgagaggtcaaggtactccaagagtttcaaactgcctattcttccaggaatactgcctgataaagtatttcttgacaagtttaaaaacaggagaccctgaagatatgtaagctcttctgggatgtcctcagtaagtgaattacttgataaatcgatacctactacagaatcaactgttctctgaaaaatttgctcacggcccttccaaaatatattaactctgtctccatactcatcttggttacgattgttactgggttctgtcctccgtgaaaccacagaaaaatgttgtacttgaagctgcaagggggtatcaagcctattaaaggattctgtttcagatataatttcagtcagaaacatggatgttaagttgccaaaagaattcggaatgtgtccagtaaaactgttcttggacatgtcaagtaattgtaaccgagaaagttgggataactctgaaggaatatctccactgaaattgtttgattgaagactcagaaatcttaccagaggaacactagttccaatccaaatgggtatatgaccaaagaacatattactccctagatcaagtgcgatcaagcttctgcattgctttatgactgaaggaaaaactcccctgagatcattattcgccagataaagcgtctcaagaggaatatttgagcttgttgtggaagagatttctccagaaaaaccattgttcgacaaatctagaaatttcaaagctggcaaactccacaagttttcaggtagattaccggtaaaccgattatatgacaagtctaggtaggtcaggcttgggtggtcactgaatgcctctgaaatgtcaccggtgaagctgttattggcaagacttacctggtacaaccttgtgcagtttctaaagcatgctggcaaattaccagtgaagttgttgttgctcgctgtgaagttctgcaatgcaaaaccctcgcaaatattctgcgggagcttaccagagaagaagttgtttgcgaggctcacatcgatgaggcgcactcctcttccgaggtcagaggggatgatgccactgagcttgttgccgaataaatcgatgtaattgagattccggagcaaggtcatggtgggaggcagttcgccgtccagttggttgctgttcaggttcaacatttgcaacgatgtcatgttgccaatctctggagggatcgtgccgctgagctcgttgaagaacaatgccaatctcgtcagctgtgagagcctcccgatcgacttggggatcgatcctgtgagccagttaactgataaatctagctctgaaagttcaaccaactcacctagctctgcagggatagagccagtgaagttgttgctgaacaggtacaggtattgaagtttcttcgccttgccgagctccggcggaatcttcccggtgaacgagttgctctgcacttggaaggatatgagctccggccagctcgtgaacagttctggtgggatgtcgccggtgaggatgttgcgagcaatcccgaagtaccgcattgcccgcatcccggcgaactccggcggcaagccaccggtgagctggttcatggatagctccagaaaagtgagattcctaagattgcctagctgcgacggcagagaggaaacaagcccagcgttcttgatgtcgagccgttgcagcatgtggagccggccaagaaccggcgggatcggcccgccgagctggttgtcgccgagttcaagaatcctcaactgcggcatcgacccgaggaactccgggacgccgccggtgagattgttggcggccatccgcaggtcctgcagcttcgtcaacttcccgagcgacgccggaatcgggccggagaacgcattgatggacaggttgaggtacctcagattcgggagcttctccggcagcgtgtccggtatcttcccgaacagagtgttctgcgacaggtcgaggtaggtgacgttgccgctcttgaggatgaactccgggaagctgccattgaaggagttgaggtagagcgacatgaacgtgacggtgggcatcggcgagaacttggcgaagtcctcgtcggtgaggtagtttgctcccaggtcgaagtgggcaaccttggggaggcggctgagctggtgcgggatggcgccgacgaggttgttgttgtagaggcggaggtcgacgaggccggagaggtcgccgagctgcggcgggatggagtcgctgaagccattgttgccgaggtcgagcgaggccagcgagcggagccgcgagatgctcgccgggatggcgccggtgaagttgttcccgttgaggtcgagctcggccaacgccgggagcgccgcgaagtcgagcgcgtcgaggccgccgccaaggccggcgcccctgagccggagcgaagtgacgcgggcgccgccggcggcggcgtcgcaggccacgccgcgccacgcgcacaccggcgcggcgcggctccacccggacagcgcggccgcgccgtcctgcaggccggccttccacgccagcagcgcgtcggcctccgtcgccgcatccgccgcggcgaccaccaccaccagcagcagcaggcggagggcgtcgtgtctccgcggcat
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| CDS seq | atgccgcggagacacgacgccctccgcctgctgctgctggtggtggtggtcgccgcggcggatgcggcgacggaggccgacgcgctgctggcgtggaaggccggcctgcaggacggcgcggccgcgctgtccgggtggagccgcgccgcgccggtgtgcgcgtggcgcggcgtggcctgcgacgccgccgccggcggcgcccgcgtcacttcgctccggctcaggggcgccggccttggcggcggcctcgacgcgctcgacttcgcggcgctcccggcgttggccgagctcgacctcaacgggaacaacttcaccggcgccatcccggcgagcatctcgcggctccgctcgctggcctcgctcgacctcggcaacaatggcttcagcgactccatcccgccgcagctcggcgacctctccggcctcgtcgacctccgcctctacaacaacaacctcgtcggcgccatcccgcaccagctcagccgcctccccaaggttgcccacttcgacctgggagcaaactacctcaccgacgaggacttcgccaagttctcgccgatgcccaccgtcacgttcatgtcgctctacctcaactccttcaatggcagcttcccggagttcatcctcaagagcggcaacgtcacctacctcgacctgtcgcagaacactctgttcgggaagataccggacacgctgccggagaagctcccgaatctgaggtacctcaacctgtccatcaatgcgttctccggcccgattccggcgtcgctcgggaagttgacgaagctgcaggacctgcggatggccgccaacaatctcaccggcggcgtcccggagttcctcgggtcgatgccgcagttgaggattcttgaactcggcgacaaccagctcggcgggccgatcccgccggttcttggccggctccacatgctgcaacggctcgacatcaagaacgctgggcttgtttcctctctgccgtcgcagctaggcaatcttaggaatctcacttttctggagctatccatgaaccagctcaccggtggcttgccgccggagttcgccgggatgcgggcaatgcggtacttcgggattgctcgcaacatcctcaccggcgacatcccaccagaactgttcacgagctggccggagctcatatccttccaagtgcagagcaactcgttcaccgggaagattccgccggagctcggcaaggcgaagaaacttcaatacctgtacctgttcagcaacaacttcactggctctatccctgcagagctaggtgagttggttgaactttcagagctagatttatcagttaactggctcacaggatcgatccccaagtcgatcgggaggctctcacagctgacgagattggcattgttcttcaacgagctcagcggcacgatccctccagagattggcaacatgacatcgttgcaaatgttgaacctgaacagcaaccaactggacggcgaactgcctcccaccatgaccttgctccggaatctcaattacatcgatttattcggcaacaagctcagtggcatcatcccctctgacctcggaagaggagtgcgcctcatcgatgtgagcctcgcaaacaacttcttctctggtaagctcccgcagaatatttgcgagggttttgcattgcagaacttcacagcgagcaacaacaacttcactggtaatttgccagcatgctttagaaactgcacaaggttgtaccaggtaagtcttgccaataacagcttcaccggtgacatttcagaggcattcagtgaccacccaagcctgacctacctagacttgtcatataatcggtttaccggtaatctacctgaaaacttgtggagtttgccagctttgaaatttctagatttgtcgaacaatggtttttctggagaaatctcttccacaacaagctcaaatattcctcttgagacgctttatctggcgaataatgatctcaggggagtttttccttcagtcataaagcaatgcagaagcttgatcgcacttgatctagggagtaatatgttctttggtcatatacccatttggattggaactagtgttcctctggtaagatttctgagtcttcaatcaaacaatttcagtggagatattccttcagagttatcccaactttctcggttacaattacttgacatgtccaagaacagttttactggacacattccgaattcttttggcaacttaacatccatgtttctgactgaaattatatctgaaacagaatcctttaataggcttgatacccccttgcagcttcaagtacaacatttttctgtggtttcacggaggacagaacccagtaacaatcgtaaccaagatgagtatggagacagagttaatatattttggaagggccgtgagcaaatttttcagagaacagttgattctgtagtaggtatcgatttatcaagtaattcacttactgaggacatcccagaagagcttacatatcttcagggtctcctgtttttaaacttgtcaagaaatactttatcaggcagtattcctggaagaataggcagtttgaaactcttggagtaccttgacctctcatcgaatgaactttcaggtgttattcctccaagcatttcaaatttgttatctctcagcatgttaaatctctcgaacaatcgcttatggggtgagatacccactggaagtcaacttcagacgcttgtggatccatcaatctatggcaataatttgggtctttgcggcttccctttaagcatagcctgtcatgcatctacactggatgagaaaaatgaagaccatgaaaagtttgatatgtccttatactactctgtaattattggcgtcgtttttgggttttggctttggtttggagctctgatttttcttatgccattaagagtttttgtttttcgttttgttgaccagataggaagaagttatgcaaaagttgcacacattaaagcactcttcagatgcaaatcagcaagcaagtaa
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| Protein seq | MPRRHDALRLLLLVVVVAAADAATEADALLAWKAGLQDGAAALSGWSRAAPVCAWRGVACDAAAGGARVTSLRLRGAGLGGGLDALDFAALPALAELDLNGNNFTGAIPASISRLRSLASLDLGNNGFSDSIPPQLGDLSGLVDLRLYNNNLVGAIPHQLSRLPKVAHFDLGANYLTDEDFAKFSPMPTVTFMSLYLNSFNGSFPEFILKSGNVTYLDLSQNTLFGKIPDTLPEKLPNLRYLNLSINAFSGPIPASLGKLTKLQDLRMAANNLTGGVPEFLGSMPQLRILELGDNQLGGPIPPVLGRLHMLQRLDIKNAGLVSSLPSQLGNLRNLTFLELSMNQLTGGLPPEFAGMRAMRYFGIARNILTGDIPPELFTSWPELISFQVQSNSFTGKIPPELGKAKKLQYLYLFSNNFTGSIPAELGELVELSELDLSVNWLTGSIPKSIGRLSQLTRLALFFNELSGTIPPEIGNMTSLQMLNLNSNQLDGELPPTMTLLRNLNYIDLFGNKLSGIIPSDLGRGVRLIDVSLANNFFSGKLPQNICEGFALQNFTASNNNFTGNLPACFRNCTRLYQVSLANNSFTGDISEAFSDHPSLTYLDLSYNRFTGNLPENLWSLPALKFLDLSNNGFSGEISSTTSSNIPLETLYLANNDLRGVFPSVIKQCRSLIALDLGSNMFFGHIPIWIGTSVPLVRFLSLQSNNFSGDIPSELSQLSRLQLLDMSKNSFTGHIPNSFGNLTSMFLTEIISETESFNRLDTPLQLQVQHFSVVSRRTEPSNNRNQDEYGDRVNIFWKGREQIFQRTVDSVVGIDLSSNSLTEDIPEELTYLQGLLFLNLSRNTLSGSIPGRIGSLKLLEYLDLSSNELSGVIPPSISNLLSLSMLNLSNNRLWGEIPTGSQLQTLVDPSIYGNNLGLCGFPLSIACHASTLDEKNEDHEKFDMSLYYSVIIGVVFGFWLWFGALIFLMPLRVFVFRFVDQIGRSYAKVAHIKALFRCKSASK |
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| Function | Receptor-like protein EIX2 [UniProtKB/Swiss-Prot:Q6JN46] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_10g0013770 | OsCMeo_10g0013770.01 | Chr10 | 17808372 | 17811383 | - | NAM | ||
| CDS seq | atgccgcggagacacgacgccctccgcctgctgctgctggtggtggtggtcgccgcggcggatgcggcgacggaggccgacgcgctgctggcgtggaaggccggcctgcaggacggcgcggccgcgctgtccgggtggagccgcgccgcgccggtgtgcgcgtggcgcggcgtggcctgcgacgccgccgccggcggcgcccgcgtcacttcgctccggctcaggggcgccggccttggcggcggcctcgacgcgctcgacttcgcggcgctcccggcgttggccgagctcgacctcaacgggaacaacttcaccggcgccatcccggcgagcatctcgcggctccgctcgctggcctcgctcgacctcggcaacaatggcttcagcgactccatcccgccgcagctcggcgacctctccggcctcgtcgacctccgcctctacaacaacaacctcgtcggcgccatcccgcaccagctcagccgcctccccaaggttgcccacttcgacctgggagcaaactacctcaccgacgaggacttcgccaagttctcgccgatgcccaccgtcacgttcatgtcgctctacctcaactccttcaatggcagcttcccggagttcatcctcaagagcggcaacgtcacctacctcgacctgtcgcagaacactctgttcgggaagataccggacacgctgccggagaagctcccgaatctgaggtacctcaacctgtccatcaatgcgttctccggcccgattccggcgtcgctcgggaagttgacgaagctgcaggacctgcggatggccgccaacaatctcaccggcggcgtcccggagttcctcgggtcgatgccgcagttgaggattcttgaactcggcgacaaccagctcggcgggccgatcccgccggttcttggccggctccacatgctgcaacggctcgacatcaagaacgctgggcttgtttcctctctgccgtcgcagctaggcaatcttaggaatctcacttttctggagctatccatgaaccagctcaccggtggcttgccgccggagttcgccgggatgcgggcaatgcggtacttcgggattgctcgcaacatcctcaccggcgacatcccaccagaactgttcacgagctggccggagctcatatccttccaagtgcagagcaactcgttcaccgggaagattccgccggagctcggcaaggcgaagaaacttcaatacctgtacctgttcagcaacaacttcactggctctatccctgcagagctaggtgagttggttgaactttcagagctagatttatcagttaactggctcacaggatcgatccccaagtcgatcgggaggctctcacagctgacgagattggcattgttcttcaacgagctcagcggcacgatccctccagagattggcaacatgacatcgttgcaaatgttgaacctgaacagcaaccaactggacggcgaactgcctcccaccatgaccttgctccggaatctcaattacatcgatttattcggcaacaagctcagtggcatcatcccctctgacctcggaagaggagtgcgcctcatcgatgtgagcctcgcaaacaacttcttctctggtaagctcccgcagaatatttgcgagggttttgcattgcagaacttcacagcgagcaacaacaacttcactggtaatttgccagcatgctttagaaactgcacaaggttgtaccaggtaagtcttgccaataacagcttcaccggtgacatttcagaggcattcagtgaccacccaagcctgacctacctagacttgtcatataatcggtttaccggtaatctacctgaaaacttgtggagtttgccagctttgaaatttctagatttgtcgaacaatggtttttctggagaaatctcttccacaacaagctcaaatattcctcttgagacgctttatctggcgaataatgatctcaggggagtttttccttcagtcataaagcaatgcagaagcttgatcgcacttgatctagggagtaatatgttctttggtcatatacccatttggattggaactagtgttcctctggtaagatttctgagtcttcaatcaaacaatttcagtggagatattccttcagagttatcccaactttctcggttacaattacttgacatgtccaagaacagttttactggacacattccgaattcttttggcaacttaacatccatgtttctgactgaaattatatctgaaacagaatcctttaataggcttgatacccccttgcagcttcaagtacaacatttttctgtggtttcacggaggacagaacccagtaacaatcgtaaccaagatgagtatggagacagagttaatatattttggaagggccgtgagcaaatttttcagagaacagttgattctgtagtaggtatcgatttatcaagtaattcacttactgaggacatcccagaagagcttacatatcttcagggtctcctgtttttaaacttgtcaagaaatactttatcaggcagtattcctggaagaataggcagtttgaaactcttggagtaccttgacctctcatcgaatgaactttcaggtgttattcctccaagcatttcaaatttgttatctctcagcatgttaaatctctcgaacaatcgcttatggggtgagatacccactggaagtcaacttcagacgcttgtggatccatcaatctatggcaataatttgggtctttgcggcttccctttaagcatagcctgtcatgcatctacactggatgagaaaaatgaagaccatgaaaagtttgatatgtccttatactactctgtaattattggcgtcgtttttgggttttggctttggtttggagctctgatttttcttatgccattaagagtttttgtttttcgttttgttgaccagataggaagaagttatgcaaaagttgcacacattaaagcactcttcagatgcaaatcagcaagcaagtaa
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| Protein seq | MPRRHDALRLLLLVVVVAAADAATEADALLAWKAGLQDGAAALSGWSRAAPVCAWRGVACDAAAGGARVTSLRLRGAGLGGGLDALDFAALPALAELDLNGNNFTGAIPASISRLRSLASLDLGNNGFSDSIPPQLGDLSGLVDLRLYNNNLVGAIPHQLSRLPKVAHFDLGANYLTDEDFAKFSPMPTVTFMSLYLNSFNGSFPEFILKSGNVTYLDLSQNTLFGKIPDTLPEKLPNLRYLNLSINAFSGPIPASLGKLTKLQDLRMAANNLTGGVPEFLGSMPQLRILELGDNQLGGPIPPVLGRLHMLQRLDIKNAGLVSSLPSQLGNLRNLTFLELSMNQLTGGLPPEFAGMRAMRYFGIARNILTGDIPPELFTSWPELISFQVQSNSFTGKIPPELGKAKKLQYLYLFSNNFTGSIPAELGELVELSELDLSVNWLTGSIPKSIGRLSQLTRLALFFNELSGTIPPEIGNMTSLQMLNLNSNQLDGELPPTMTLLRNLNYIDLFGNKLSGIIPSDLGRGVRLIDVSLANNFFSGKLPQNICEGFALQNFTASNNNFTGNLPACFRNCTRLYQVSLANNSFTGDISEAFSDHPSLTYLDLSYNRFTGNLPENLWSLPALKFLDLSNNGFSGEISSTTSSNIPLETLYLANNDLRGVFPSVIKQCRSLIALDLGSNMFFGHIPIWIGTSVPLVRFLSLQSNNFSGDIPSELSQLSRLQLLDMSKNSFTGHIPNSFGNLTSMFLTEIISETESFNRLDTPLQLQVQHFSVVSRRTEPSNNRNQDEYGDRVNIFWKGREQIFQRTVDSVVGIDLSSNSLTEDIPEELTYLQGLLFLNLSRNTLSGSIPGRIGSLKLLEYLDLSSNELSGVIPPSISNLLSLSMLNLSNNRLWGEIPTGSQLQTLVDPSIYGNNLGLCGFPLSIACHASTLDEKNEDHEKFDMSLYYSVIIGVVFGFWLWFGALIFLMPLRVFVFRFVDQIGRSYAKVAHIKALFRCKSASK
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 3.617634 | 0.219821 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0468800 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g33130 | RBH | 0.532318 | 0.281205 | 0.018365 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0468800 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0014030 | SBH | 0.062084 | 0.0 | 0.621771 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0014240 | SBH | 0.002502 | 0.249035 | 0.624191 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0003440 | SBH | 0.0 | 12.363008 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0014070 | RBH | 0.0 | 0.136633 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0013970 | RBH | 0.0 | 0.000000 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0288800 | SBH | 0.137182 | 1.9143645 | 0.8113775 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0013990 | RBH | 0.0 | 0.158524 | 0.245508 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0310200 | RBH | 0.1353445 | 0.0214225 | 0.157573 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0013710 | SBH | 0.014096 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0013590 | SBH | 0.042996 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0013990 | RBH | 0.0 | 3.161577 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0013700 | RBH | 0.0 | 0.0 | 0.076431 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0014240 | RBH | 0.0 | 1.608287 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G013910 | RBH | 0.0 | 1.703322 | 0.154869 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0013850 | RBH | 0.0 | 5.245385 | 0.637683 |
