Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_07g0000630 | OGI:07001360 | 6/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr07:497620-508165 | ||||||||
| Gene Symbol | RPL13A, OsRPL13a, RPL13a, - | ||||||||||
| DNA seq | gaacaaaattatcatgtttcgacagacatatcatttcacttctcatggtaccgataagcagaaatattataaaggcgaaaagaaaattgatgacaatcaggccaatcaatatttgattggggccaaaatatctatctgagaacccagcttctcctcagcagctttctcagccttgacacgaagccttgttaattgcttcctcctctcgtatgcaaccttagccttctcctttctcttctcctccaattcctgcaggtgcaatagacaaggtgatcagtgtgctttcatgtataagaactaaagggaaacataaaaagcccaaccagaattgagatgataacagcctagaaatgcaggacatggttgaaataatagcacaaactcagaaacaaagcagataaatgtatcaaacagaatattttgttgtgAgaaaTGGCACAGTTGGTCAGAAGTAGCTGGTTGTAAACATCATTCTGAAAAATCAGTGAGAATACATGTATTTTTTCTTCATTTTACCAATCATGCCAAATATGCTATTTAACTCAACATGGATTAGAAAAAAAAACACatgctgtgtaacaattgaaaaggggatgcaaacaagaaaaaaaaatatgcatttgcaaattcacagccatagcataagtaatcacaggtttatgggaattccatcatctttgtgcaaataaataaataggatacttaagatttcgtgcatcatgagtcatcaactaatctcagacagttgaggctatggtgtaaaacaaaagctagagaggtgtacagcataaaagtagctcagcaaaaacctacatattcaaatccagagcatgttgagtttgagttcaacgcattaccaccgtacagttgtacaatcaaatagctacaagggcccaatattcacaaaagtgatcacataataccataacattccaagatgaactattcttaacagtccaacacatgtattcagcattgcattcatcctaacacgttcagttcaatagtactcctacatgtatttagcatatccattcatccgaaaagtaaaagggggcacatgtatacatcatatgcattcaaccggattgtgattcggtgacattcccccgtgacattaccgagaatgtcacgggggaatgtcactgaatctgcgtcccattcaacctaaaactaaaagcattacagcagcatatgcattcaacctaaaactaaaagcattagagaagcatatgcattcaagctaaaacgaaaagcagcgtgaatatgaatacagaaaggaaatgtaccctgatggtgtcgtggtagttccagccgacctccttggagagctggccgaggaggcagtacttgtggccgggctggaggcgaagaaccctagaagccatggattagttcatggaggaaaagaaaaggagaggagaggagaggaaagggttcgaagcgagcgtacttgagggcgtcggggacgaccatgcgcttggtgcggtcgtagggaggggggacgccgtcgaaggccttgaggttggcgagggcggcctcgccgcggggggtcttgtgggggatcatgccgcggacggtgcgccagaagatgcgggagggggcgcggaagtggatggggccatgggagggcttggtgttcatccgcttgcggaggaaccggaggtacttcatcttctgccggacgagcccgccggagatgcacatctcctcgcaccgcaccaccaccacccgctgcccgttcaggagctccttcgccaccagcgacgccagccgccccagcatgtggtgccgcgcgtccaccaccacccgccgcgtgcacagccccgaacccgacaccatcttcctctccttcttcttcttcttctccggtgggggtggtaggaggtggaacgcggcggcggcggcggcggctgcggagaagcgaagctctagggtttacgaatgaatctccttttataggtggggcatcgactaggacatagataatgggccgcactggaccttgatgggcttacttttgtttgggcctccaacatgttccttgtatcatggggcctaccatgggctcttctacgcctcattcttagagtttttctgctcccaagatactaactgttcttttctatatttttcaaaaaggagaaaagaaaatgttcttacagagaaagaaaaaggataattccagtacattgtgcccttcaactaccacattccttggctattttcaacgcctatatatttgcaaatgagcatcaaaacagcacagactggtgatggtttaccagatcatctatattttttttagaaatataatactacaagatcatcatctatattactgtaggaaaactggtcgcacagctaacatttgatttcaagacagcatcccaaatacattaacaattgacaacgtttttttttctttttttgttattactaaacaataatcctcaagcaaataatatggtgccatgccaacattggtgtttgcaaaccagctctttcttcatcatcattcgtcatcactgtcaaaaacgaccgccttccgacgatgaactgcctgctgttttcttggtggagaatcatcgtccgagtcgatctccttgcgcctttggctggcactgccacccccagattctctcctccgttttggttcctgcagcagaggctcctctttcagtttcgatttatatacagctagcctcatcatgtttttctttcaagtttgctatattactacaacaaaaaaccaatcgtagattcctttcagctattatatgctaactagtgtgcagaagtagtcaaacatgaactgagtacattttttctgtttccttttgtttcacttcaacataaacaaagcagcaagtctgcctgctgacctgttaattactctgttgcagaattactgagcataaactacaaaatgtcagcaatgtaaactaaaatatcaaattggtcatattcctagtggttactgtcaggattcttgaaaatcttgccctcacatatgctgcaaaagtatttaattccttaatgtctttactgggcatatccaagaaagaacctgacttgcaaaatttgaaccttacgacaatgttcattcgtatcacatttacataatcacattgctaacttgtgaaaaagaaaaccaagagttttgagtccatgacatcggtcttacctcaatttcttcatctgacatggctgcttcttcttccacatcttcctcatattcatcttcttcatcaagctcatcttccctcccctgggttggtgagtgctcaatatcctctccttcagtttcatactctgactcctccctttcactctcagaatattcatttgcctgtcgtctaggcggatgagcaggaaaggatggtttgcgaggaatgtttctgcccatacttgactgaaaatgtgcaaacaatacagattatgtataaacagcaatacattggttaaaaataacaagggttacatgctgatgagttgctcaccttctttgcactaactatgcgcctctcagctagtgcttcagcctccagttcatcctcAaaacgactacgtgctggcattcggcgagaaccatattgatggtcaggttcctcgtcctgccaaaaatgaaattgaataaattattgggcataaccagtactaaagtcttattaattgtcacatcgaatccaatctcctgccagaatgcaccaaaaggaaaagttgcaaatcatcacagcacattttactcctacaaaaacagctattgaacacgtgtatctaaatccaaggaaaaacatcatgtgagctacaacagcagaataaaattaaccatctacccagaatctggatatgtaaccattcagtaaggtacactcacagttgagtaaaccagctaagcatagaaaaaaaaatctcacacaaacaaactgccaacataatgatctatgtatctgagccatttacagtaagcttaaacaagtccatattgcccctatgaaattacagataaacaatttatgtgtgcgtgccatgggcatacgatagcagcctacatggtttcaaaaaaggaaataaaattaaccagacaagaaaaatttggatatcatcgcgtaaataacatgtaggactgaagaggatttcagttttcactgaacagagtttttaccatgcaacagctttaggtcggaaagtgaaattgaactcaaatcacttgctaaaatcaaataaggagtgggcagtgttaataagatgtggagggaaatttggaagcataggaacaactgtttgtggcagtgtgcaactctgtatgtggcagcggtgatccaatcagtagcaaatgaaggtgcactttggtgcttgcctggagtttcaaagcttcgaaacctgtttgctaggtcgatagcccttgcaacttaactaggtcattcggtttgtttggttcttttgtaagacatgacggtgtttagggagtgggattttttctaaactcccctgtgctgcaccgcccctacgcagatctcctgcatgttcgagaaaagAaaaaggtgtggagggtcttgcactttaccagcattatattgcagccaaaattggccgcacagctaaattggaaagactgacgatcattcaaatggcatttactagtgagatttaataggatgcgtctggactaaatatcatttatcactaatactagaactgtatgaacaacaataactgattgtatcaatgaccttaagtggaagaaataagagaaatgacaagaaacccacctcatctaatgcatcttccAaaaatccaggagaaagctgccttctttgcctggcaggctgtgtgtacttgcggctaaccttttcttttttgcgttgaagaattgaatgggctcgaatattttggcccaaggcctgcatagtgaaaagggacaaacttcattcaaaatgcatatataacaagtttagaacagaaaggaaatacagcaaagcatggaacaggattaaatgcatttactaaatcggcatgtcaactatttgattattgcgccttcacaaaaggaaacttaaccctatgtgatttactttttgtgaaaagttcactggatcaagccacaataaatgctatgcagcgtagcagtaagaacaaatcacgttacaataacttttagactctcaaatcaaagctgaaactcacaggatctagaacgcgtgttgaactgccacagaaattgagctaatcaatgcttgcttatgcattggagaaaaacatgaaaacacacaaacaagagaatttgctgaatacaaattgcagtattgttggaaaatgggacctctgatatcacattgatatttgttggaatgacgacataaatttcttaatcttagaactcatcctctcatcataaaaggaagAaaaaaaaaACAGAGAAAGCAACAAGATTGTGGAACTCATTCAAATGATTTCATAATGATTACATCTTTATTTTTAGGATAAATATGATGAAAATCTTGCTCTTTACCATTCAAGAGATTTACAGTCAACATGCCAAGATTTGCATGTAATGTTTTTAGACACTGGAGAATCGTCAATTTACCAACTATAGCTAAAAATGTTATCACGTGTTTGTGATCCAAGAAAAACAATTTGcttgctgattgtcatgctctaaatttgcttgctgattatcctgctctaaaagcatcaactgtcctctcaatcattttatatagtgatcctgactagctatgcgcccaagaataatcaaatttgaagctcatatttccatgaagaagaccattattgtagcttgcaacattagttagtactttagtagcatttccttaatggtactagcttaccagttatgctcatattcacttgtttgtcagttatctggtacaaattcagtatctgctcaaatctctcatggtcagataccaaattatatttacttaatttgaagtttgcattctgactatcttgctgattattctactctattaagtattacatgcatccaactcctataatctaaagaaataaggggaaaaatataaatgtacatgttacgtcaagcccaatggctatcccctatagaaaaaaatggaaagtgagtataacacaacacaaatcatgttgtttttgacataggaaccatatcagaagcagcatttggacaaatgtaagtcatacacatgtcattcagtgttgcatatacatccaatgaattaagaaatggagtttttggttaccctttctttttcctgcttcactttctcaggatccttagattcgatccatttttgcatcttaacagttttcttattctgagaatcaacaagagcagttAaTaaacgatgtgatttcgaagacaaggaagatggcatgaatctcattttccgtaagagccttccttgtgattgaaggactccctgcattacaattcaaaattatatcaggttagtgagacctatgcggtaagagcatgaatgaacagaggtggtagcgaacattgttgaattgcagacaagaagtactttaccttcccattcctcagaaacagatgggactgatcatgatgtgcttcatgtacagatatatcaagaacttcattgccaatcagcagctgcatcgttccatctttccattttacaatgcgcgcattactttcacactgcaacaatgctcatttatcatatgcatagccacatagtgcaccgaccacctgtcacaaactacttaaaagggcaatgaccaaaaaaaaggaggaagaaaaagaaacagagcaagcatcttatggtatgtataataacatatatattcttttgcagggaatacataataacagttgggcaagttggctatgagagaagactcggtgcaagcatcactAaaggctagttcacaaccctgattattgtaagaaagttaagaagctgcccagagcatcttcagggagggaaacttagaagatggcgacatagcataactgagtctgtaatgctaaaggatttcaaaatgctacttgaaaaacattccacttacagatgtagtgccattagcattcttaacggttctccaccgcacaatattgtcctccagtcgtatccTttttttagtcccagattcatctgtaacAaatacatcctcctccacatatgttttaggatcaaaaggcttcgggtcaatccccataatgtttgataccttgatcacattcatctacaagttaagaaatcagtcagtaacaaaaaaatctatgaatagctgcaaaagcacaaaATatttaagcaccaatcattaatattcctagtcaagcctataacatgacagcaaagttctcttcaataataccatgacataaaaaagaaatttcaactactaaagggccaacgtcacataataagtacaagcatggagttcatagcagcacaggttctttatttctgacattgtactgcaccagtcaattgtgcagttctgcacaacaacatttacgaacaagcacaaaatatcagcaattaaacagtaacagatacaaagaatgacaaatAaaaatctggtgtatatacagcaacgcaataaatatccatcaaagataactgatgcctgccaatatataatcatcttgtcagaaaagataacagtgctgtatggtcaaagactgaaagatatatggttcgaaaggggtagtcaactcactctgtcgggttgagctggcggctgcttaagtggaaccaccaggttcaacggtggaccaactggtttctcttttggtttcaattcacgattttcatctgattcatatctcatatcttcatcagctactacatcctcaggctgcaaatccttctcatagtgaccttcatcttccatgggtgatctctaaaaaagaaaggaggaaattttgagtacctattgcatccagaaaaaagttaggtgtgaaagttgatcaatactgactggagcacagatctatattcatgcagggtacatacaagaaatgaatagggagaaagattagatttttagataaatacataattagcaaagatgctacctgcattagtaaatttgttacatagttaagcatcatatggtaactctgaatttaaaagaatataaaacacaaaattctctacatattgaattacatgaatacttttgctgatattcagtttaaacaacatgccaccaagtcatcgttagcatactgtacttgctcagtgcagaatgtataaaaaaatggctctgtttagaatttctgtgaaaatctttgctggttttctttaagcccgacaaaagatattcctactttaagcctagaatggtaggtaacttgagcataaaaatctcacatgggaatcttcatcaatttcatgttgatcacgatatggagcaggtccatcttcatcgctttcaccaaatacatcacggacaacttcatgatctctctcctcctcaactggcgagctgcataagattatggttcttacgagttactacttactacaaaggtagggaggatatacataggcaaagagtgcatattgagtcactagcaaaatactaagaaacagttaatgaagcagtggatagattgttactccctccgtactcgtaaaggaagtcgtttaggacaatgtttaagtcaaaccttgggaatataaatcatgaataactctcaagtagttgagtttaaaaatgtaaaaattatatgaatagatttgtcttgaaaaatactttcataaaagtatacatataccactttttaataaatatttttatagaAATaagtcaaagttgtgttttggagaccgtgtcggtgtcctaaacgacttcctttacaagtacggagggagtacgtcgtaatgccagatctagaaagcatataatgcacagacaataaataggattctgattgttttcccttaaccttggtgttttccttgtttgatgaggttcctcatcttcatgacctcgaccagcataatagtcatcttcagacccctcagattcagaggcaacaactcctcttcttctgctagctactggccgctgctgatagccttcgtcttcactatccatgcctgctgcatcattttgcatcacccggtcactaaattctctttctggggagctctggaccttttccccatcactttctccttgatcaagatcagcacggtgagcttcagcttcactttcttcttccatcccaacttgcccctcactttcaccttctccttccgcttcaccttcccctccatTAtcagcctcaccttccacttcttcctgtacaagcaaatcaataagcaagcatcacatcagatagctgcagcggaagtatacagaatgcatcgatgaagaactggggcactagaagagcctacaagagctaaactctgtggcaagatcagcaaggaatgacggttcgatttttacaccgtgataggtccagtatgtctccaaatcacttgctacagctgggcactaaaaaaactagcattacacacagaggatttacacttgagactgacagacttgcgcgcaaagtgtgaggaaacaaaatgatggatttctgaaatgccagtggtgttcaagaggcaatgctccatatcacgtcacctAaaattacaatagttttggttcaaaaaagtacaatattctactagcaagtttattatcaagatgttcctttcaaaggaacatcaatcctttcagaattctcgaacagatgattggggatcagcgaagcagaaatgtactggttcatcaaactgcagtatcccaatggcgagatttattccagccgaacaaacctaagccctaaccccaggacgaggggggggggggggggtggacggggacaggaagcaggggaggggagatttgagatttttaccgagtggtagccggagcgggcatggccttcgctacggacgtcgtcttcgtcgtcgtcgtcgtccaccacctggtggcgaagcagctgctgctgctgcggatgcgggtggtcgacctcgtcgacgacctcgacggcctcgtcgtcatcctcttcgtcctccgactggtcgccgaagaggttctgcatcatctggttcctcgtctcctcctcgacatccctctccctgtcgccgccagccatcgccgccgccgccgcctctcctctccaattcttcttcaattggggatttctttcgaaaatgctgtcaaaagtgcggccgatggaagccgaaaaaatggggcgcctcgctcgctctccttctcctcctccgtagccgtagccgccgccgccggccgctggccgagtaggaggccggagctcggcgcgacgacgacaggacgcgctgccgcaaggaggttcgccaccgctgccgcTcccgggatgagcgcgtcgtcgtactaccgcccgcgccacgccgcggcgctggacggagcggcggccgtgcggcctttggggcgccccgcgtcgggcggcggcggcgacgagtcgcgagccgtgccggcagcgagagcgagatgctcgccgggaagagtggtggatgggtgc
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| CDS seq | atggctggcggcgacagggagagggatgtcgaggaggagacgaggaaccagatgatgcagaacctcttcggcgaccagtcggaggacgaagaggatgacgacgaggccgtcgaggtcgtcgacgaggtcgaccacccgcatccgcagcagcagcagctgcttcgccaccaggtggtggacgacgacgacgacgaagacgacgtccgtagcgaaggccatgcccgctccggctaccactcggaagaagtggaaggtgaggctgaTAatggaggggaaggtgaagcggaaggagaaggtgaaagtgaggggcaagttgggatggaagaagaaagtgaagctgaagctcaccgtgctgatcttgatcaaggagaaagtgatggggaaaaggtccagagctccccagaaagagaatttagtgaccgggtgatgcaaaatgatgcagcaggcatggatagtgaagacgaaggctatcagcagcggccagtagctagcagaagaagaggagttgttgcctctgaatctgaggggtctgaagatgactattatgctggtcgaggtcatgaagatgaggaacctcatcaaacaaggaaaacaccaagctcgccagttgaggaggagagagatcatgaagttgtccgtgatgtatttggtgaaagcgatgaagatggacctgctccatatcgtgatcaacatgaaattgatgaagattcccatagatcacccatggaagatgaaggtcactatgagaaggatttgcagcctgaggatgtagtagctgatgaagatatgagatatgaatcagatgaaaatcgtgaattgaaaccaaaagagaaaccagttggtccaccgttgaacctggtggttccacttaagcagccgccagctcaacccgacagaatgaatgtgatcaaggtatcaaacattatggggattgacccgaagccttttgatcctaaaacatatgtggaggaggatgtattTgttacagatgaatctgggactaaaaaaAggatacgactggaggacaatattgtgcggtggagaaccgttaagaatgctaatggcactacatcttgtgaaagtaatgcgcgcattgtaaaatggaaagatggaacgatgcagctgctgattggcaatgaagttcttgatatatctgtacatgaagcacatcatgatcagtcccatctgtttctgaggaatgggaagggagtccttcaatcacaaggaaggctcttacggaaaatgagattcatgccatcttccttgtcttcgaaatcacatcgtttAtTaactgctcttgttgattctcagaataagaaaactgttaagatgcaaaaatggatcgaatctaaggatcctgagaaagtgaagcaggaaaaagaaagggccttgggccaaaatattcgagcccattcaattcttcaacgcaaaaaagaaaaggttagccgcaagtacacacagcctgccaggcaaagaaggcagctttctcctggattttTggaagatgcattagatgaggacgaggaacctgaccatcaatatggttctcgccgaatgccagcacgtagtcgtttTgaggatgaactggaggctgaagcactagctgagaggcgcatagttagtgcaaagaagtcaagtatgggcagaaacattcctcgcaaaccatcctttcctgctcatccgcctagacgacaggcaaatgaatattctgagagtgaaagggaggagtcagagtatgaaactgaaggagaggatattgagcactcaccaacccaggggagggaagatgagcttgatgaagaagatgaatatgaggaagatgtggaagaagaagcagccatgtcagatgaagaaattgaggaaccaaaacggaggagagaatctgggggtggcagtgccagccaaaggcgcaaggagatcgactcggacgatgattctccaccaagaaaacagcaggcagttcatcgtcggaaggcggtcgtttttgacaccgccgccgccgccgccgcgttccacctcctaccacccccaccggagaagaagaagaagaaggagaggaagatggtgtcgggttcggggctgtgcacgcggcgggtggtggtggacgcgcggcaccacatgctggggcggctggcgtcgctggtggcgaaggagctcctgaacgggcagcgggtggtggtggtgcggtgcgaggagatgtgcatctccggcgggctcgtccggcagaagatgaagtacctccggttcctccgcaagcggatgaacaccaagccctcccatggccccatccacttccgcgccccctcccgcatcttctggcgcaccgtccgcggcatgatcccccacaagaccccccgcggcgaggccgccctcgccaacctcaaggccttcgacggcgtcccccctccctacgaccgcaccaagcgcatggtcgtccccgacgccctcaaggttcttcgcctccagcccggccacaagtactgcctcctcggccagctctccaaggaggtcggctggaactaccacgacaccatcagggaattggaggagaagagaaaggagaaggctaaggttgcatacgagaggaggaagcaattaacaaggcttcgtgtcaaggctgagaaagctgctgaggagaagctgggttctcagatagatattttggccccaatcaaatattga
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| Protein seq | MAGGDRERDVEEETRNQMMQNLFGDQSEDEEDDDEAVEVVDEVDHPHPQQQQLLRHQVVDDDDDEDDVRSEGHARSGYHSEEVEGEADNGGEGEAEGEGESEGQVGMEEESEAEAHRADLDQGESDGEKVQSSPEREFSDRVMQNDAAGMDSEDEGYQQRPVASRRRGVVASESEGSEDDYYAGRGHEDEEPHQTRKTPSSPVEEERDHEVVRDVFGESDEDGPAPYRDQHEIDEDSHRSPMEDEGHYEKDLQPEDVVADEDMRYESDENRELKPKEKPVGPPLNLVVPLKQPPAQPDRMNVIKVSNIMGIDPKPFDPKTYVEEDVFVTDESGTKKRIRLEDNIVRWRTVKNANGTTSCESNARIVKWKDGTMQLLIGNEVLDISVHEAHHDQSHLFLRNGKGVLQSQGRLLRKMRFMPSSLSSKSHRLLTALVDSQNKKTVKMQKWIESKDPEKVKQEKERALGQNIRAHSILQRKKEKVSRKYTQPARQRRQLSPGFLEDALDEDEEPDHQYGSRRMPARSRFEDELEAEALAERRIVSAKKSSMGRNIPRKPSFPAHPPRRQANEYSESEREESEYETEGEDIEHSPTQGREDELDEEDEYEEDVEEEAAMSDEEIEEPKRRRESGGGSASQRRKEIDSDDDSPPRKQQAVHRRKAVVFDTAAAAAAFHLLPPPPEKKKKKERKMVSGSGLCTRRVVVDARHHMLGRLASLVAKELLNGQRVVVVRCEEMCISGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSRIFWRTVRGMIPHKTPRGEAALANLKAFDGVPPPYDRTKRMVVPDALKVLRLQPGHKYCLLGQLSKEVGWNYHDTIRELEEKRKEKAKVAYERRKQLTRLRVKAEKAAEEKLGSQIDILAPIKY |
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| Function | Protein LEO1 homolog [UniProtKB/Swiss-Prot:Q9FNQ0] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_07g0000630 | OsGoSa_07g0000630.01 | Chr07 | 497620 | 508165 | - | NAM | ||
| CDS seq | atggctggcggcgacagggagagggatgtcgaggaggagacgaggaaccagatgatgcagaacctcttcggcgaccagtcggaggacgaagaggatgacgacgaggccgtcgaggtcgtcgacgaggtcgaccacccgcatccgcagcagcagcagctgcttcgccaccaggtggtggacgacgacgacgacgaagacgacgtccgtagcgaaggccatgcccgctccggctaccactcggaagaagtggaaggtgaggctgaTAatggaggggaaggtgaagcggaaggagaaggtgaaagtgaggggcaagttgggatggaagaagaaagtgaagctgaagctcaccgtgctgatcttgatcaaggagaaagtgatggggaaaaggtccagagctccccagaaagagaatttagtgaccgggtgatgcaaaatgatgcagcaggcatggatagtgaagacgaaggctatcagcagcggccagtagctagcagaagaagaggagttgttgcctctgaatctgaggggtctgaagatgactattatgctggtcgaggtcatgaagatgaggaacctcatcaaacaaggaaaacaccaagctcgccagttgaggaggagagagatcatgaagttgtccgtgatgtatttggtgaaagcgatgaagatggacctgctccatatcgtgatcaacatgaaattgatgaagattcccatagatcacccatggaagatgaaggtcactatgagaaggatttgcagcctgaggatgtagtagctgatgaagatatgagatatgaatcagatgaaaatcgtgaattgaaaccaaaagagaaaccagttggtccaccgttgaacctggtggttccacttaagcagccgccagctcaacccgacagaatgaatgtgatcaaggtatcaaacattatggggattgacccgaagccttttgatcctaaaacatatgtggaggaggatgtattTgttacagatgaatctgggactaaaaaaAggatacgactggaggacaatattgtgcggtggagaaccgttaagaatgctaatggcactacatcttgtgaaagtaatgcgcgcattgtaaaatggaaagatggaacgatgcagctgctgattggcaatgaagttcttgatatatctgtacatgaagcacatcatgatcagtcccatctgtttctgaggaatgggaagggagtccttcaatcacaaggaaggctcttacggaaaatgagattcatgccatcttccttgtcttcgaaatcacatcgtttAtTaactgctcttgttgattctcagaataagaaaactgttaagatgcaaaaatggatcgaatctaaggatcctgagaaagtgaagcaggaaaaagaaagggccttgggccaaaatattcgagcccattcaattcttcaacgcaaaaaagaaaaggttagccgcaagtacacacagcctgccaggcaaagaaggcagctttctcctggattttTggaagatgcattagatgaggacgaggaacctgaccatcaatatggttctcgccgaatgccagcacgtagtcgtttTgaggatgaactggaggctgaagcactagctgagaggcgcatagttagtgcaaagaagtcaagtatgggcagaaacattcctcgcaaaccatcctttcctgctcatccgcctagacgacaggcaaatgaatattctgagagtgaaagggaggagtcagagtatgaaactgaaggagaggatattgagcactcaccaacccaggggagggaagatgagcttgatgaagaagatgaatatgaggaagatgtggaagaagaagcagccatgtcagatgaagaaattgaggaaccaaaacggaggagagaatctgggggtggcagtgccagccaaaggcgcaaggagatcgactcggacgatgattctccaccaagaaaacagcaggcagttcatcgtcggaaggcggtcgtttttgacaccgccgccgccgccgccgcgttccacctcctaccacccccaccggagaagaagaagaagaaggagaggaagatggtgtcgggttcggggctgtgcacgcggcgggtggtggtggacgcgcggcaccacatgctggggcggctggcgtcgctggtggcgaaggagctcctgaacgggcagcgggtggtggtggtgcggtgcgaggagatgtgcatctccggcgggctcgtccggcagaagatgaagtacctccggttcctccgcaagcggatgaacaccaagccctcccatggccccatccacttccgcgccccctcccgcatcttctggcgcaccgtccgcggcatgatcccccacaagaccccccgcggcgaggccgccctcgccaacctcaaggccttcgacggcgtcccccctccctacgaccgcaccaagcgcatggtcgtccccgacgccctcaaggttcttcgcctccagcccggccacaagtactgcctcctcggccagctctccaaggaggtcggctggaactaccacgacaccatcagggaattggaggagaagagaaaggagaaggctaaggttgcatacgagaggaggaagcaattaacaaggcttcgtgtcaaggctgagaaagctgctgaggagaagctgggttctcagatagatattttggccccaatcaaatattga
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| Protein seq | MAGGDRERDVEEETRNQMMQNLFGDQSEDEEDDDEAVEVVDEVDHPHPQQQQLLRHQVVDDDDDEDDVRSEGHARSGYHSEEVEGEADNGGEGEAEGEGESEGQVGMEEESEAEAHRADLDQGESDGEKVQSSPEREFSDRVMQNDAAGMDSEDEGYQQRPVASRRRGVVASESEGSEDDYYAGRGHEDEEPHQTRKTPSSPVEEERDHEVVRDVFGESDEDGPAPYRDQHEIDEDSHRSPMEDEGHYEKDLQPEDVVADEDMRYESDENRELKPKEKPVGPPLNLVVPLKQPPAQPDRMNVIKVSNIMGIDPKPFDPKTYVEEDVFVTDESGTKKRIRLEDNIVRWRTVKNANGTTSCESNARIVKWKDGTMQLLIGNEVLDISVHEAHHDQSHLFLRNGKGVLQSQGRLLRKMRFMPSSLSSKSHRLLTALVDSQNKKTVKMQKWIESKDPEKVKQEKERALGQNIRAHSILQRKKEKVSRKYTQPARQRRQLSPGFLEDALDEDEEPDHQYGSRRMPARSRFEDELEAEALAERRIVSAKKSSMGRNIPRKPSFPAHPPRRQANEYSESEREESEYETEGEDIEHSPTQGREDELDEEDEYEEDVEEEAAMSDEEIEEPKRRRESGGGSASQRRKEIDSDDDSPPRKQQAVHRRKAVVFDTAAAAAAFHLLPPPPEKKKKKERKMVSGSGLCTRRVVVDARHHMLGRLASLVAKELLNGQRVVVVRCEEMCISGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSRIFWRTVRGMIPHKTPRGEAALANLKAFDGVPPPYDRTKRMVVPDALKVLRLQPGHKYCLLGQLSKEVGWNYHDTIRELEEKRKEKAKVAYERRKQLTRLRVKAEKAAEEKLGSQIDILAPIKY
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 6.923875 | 43.955902 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0109500 | RBH | 11.224714 | 11.289791 | 20.839504 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g01870 | RBH | 5.222479 | 5.117732 | 3.685026 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0109500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0000600 | RBH | 2.237136 | 23.446054 | 11.012978 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0000650 | RBH | 0.157296 | 0.857579 | 2.480677 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0000580 | RBH | 1.416286 | 2.997312 | 8.862645 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0000580 | RBH | 0.359291 | 0.162318 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0000600 | RBH | 4.411851 | 7.684282 | 11.774889 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0008600 | RBH | 32.3449075 | 35.3608935 | 15.3475325 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0000590 | RBH | 0.430341 | 0.537451 | 1.089582 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0006300 | RBH | 12.4044475 | 12.144475 | 21.8920325 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0000610 | RBH | 0.540816 | 0.167154 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0000630 | RBH | 1.292738 | 82.622047 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0034820 | SBH | 25.620453 | 341.969818 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0000690 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0000630 | RBH | 0.322413 | 9.975264 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G000630 | RBH | 0.526064 | 4.797099 | 2.908731 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0000640 | RBH | 1.010540 | 8.624732 | 4.749391 |
