Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_05g0005160 | OGI:05012640 | 9/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr05:4523489-4527010 | ||||||||
| Gene Symbol | OsWD40-115, - | ||||||||||
| DNA seq | atgatacagcgcagaagtgaatcatcatcatacatggagttccacagggcaatggccgcagtcatccctaagctgagcaagctgctcatggaagagtatggactaGaaaatagtgtgaaggAggggatcacatttctcaattctgagcttgagagcatgcaagctgaggttgacaagatctcaaaggtgccactagatcaacttgacaGtcaaatcaagatttgggctagagatgttcgggagctatcttatgacatcgaggacaatgttgatacattcatgctatgtgtcgatgatcttgaggcacgcaagaagcatgacttcacatggttaattgacaagtattgtaagtcattgtctgagctaaagatccgccacaaaatagcaaatgatatcaaacatgacattatcccagtaaaggaagttgtggaacgacatgataggtataatgctgatgatgttgattctaagcttccaacaattatagaccctcgcatcttgaaactttatgacaatgtcaccaagcctgttggtgttgacaaggcaagtggtgatctaattaagaagttgtccatggagaccgatgagtcatcccagaagctcaagatgatatcggttgttgggtttggaggattgggcaagacaactcttgccaaagaagtttttggcatgcttagagtgcaatttagctatgtttgttttgtttcagtgggtcggaaacctgatataaagaaagttttgaagagcatcctgattgaagttaataagcagaagcacatgtccaatctagcaaaactaagcgaaagacatctgattgatgagatccgagaatatctcgaaaacaggaggtatgtatgtcaatgcatgtttttaattatttgcatatgctgacgagtgttctgtttgctactaaaaaatgtttcattaattggctgctggttgctaatgttgtatatattttaagtaatatatattggtgaggatctttatctatattggtctacatttagtaattggaagctttcccattttAGaaaccctcaggtcaattaaaaaagggtgaaaaatgcaaaagatctatttgggcagatcagtagatgtattgtacagctctaatttatcctctcgccaagtactaagtagattatagaactggccaggggcaggtaggattttgaacttgcatatatatttgaagtaggaagggtatttttttttcctatagctaaaaacctaatagttggcttgtacaatatcacacactaataattgtatAatatatagcatatataacacaaaattgagcataagttcatatatttttaggggggatactaccaggcatttgcctagtagagtaatttgtagataaaaaatatgatttggacaaaacaacaacaaactagggaaccaaaaaaacaagaattacaagagttgtaaccaatcaacaacTtattggtcatatactgataaacttaatcatcaattgaaattgtttgctatatattcttgcatttacaaatatactatagacaattttactaattcatgcctcgtctattccctcctgataggtatttggttgttctggatgacatatgggaaatatccacatgggatattattaaatgtgctatcgtagaaagtaattgcggaagtagagtaattgcaactactcgtatttcccaagttgctgaagaagttggtgatatttataacatggagccactttctaatgataattccaaaagattattcaatagaagaatatttggtgctgactgcataggtacaactaataatcaATCaTCAATTGAGGCAATGGAAAAGGTATTAAAGAAATGTGGTGGTGTTCCATTGTCTATTATTACAATAGCTAGTTTGTTGGTTGATAAACCTCTAGAGGATTGGTCTAACGTGTATGACTCAATTGGTTTTCGGCTAGAAGATAATGAAGCAGTTCAGAACACGAGGAAGATACTATCTTTTAGCTACTATGATATGCCTTCTTACCTAAAGAATTGTTTGTTGCACCTAAGAATTTTCCCAGAAAATTGTTGGATTGAGAAAGAGTCTTTGATATGGAAATGGATAGCCGAAGGCTTCGtacatatggaaccaggaaaagggttatttgaggttggtgaaagatactttaatgagcttattaacaaaagcatgatccaaccaatggatttgatcaattatgagggcaccttggatggttgccgtatccacgatatggttttggacctcatccgcattatttcaactgaggaaagctctacaacagttttggatagaatgcatgaagagcacagcacatctctgttgagcagaaatgtccgtaggttagcactgcatattagttggaatcaagatatagacaataaccttcatgtggacatggcacgtctcaggtcattcaatgcctttgagtgtcctacaagcatgatgcctccacttctggagttccatgctctacgtgtgctagcactggaagattgtgatatcaccggaggtttctttctcaagcatcttgggaacctacaacagttgaggtatctaggaatgagaaacactggtaaagttgagctcccacaggaaatagggaatcttaagcacttgcaaacattggatgtcagggacagtttccttgatgcacttccagtaattgtgtatgaactaagcaagttgttacgcttatgcatggactcattcactgaagttcctgctgggctcggcaatctgaagtccctacaagagctttgggtctatgtatcggatgacagctgcccaaacttcgctgcggagctgagcaacctaactgacctaaaagttctccacattaattggtattgggaggtagacgaggtatcgctgaaggatttggtggagtctctacgcaatctacatagattagaggacctaagcttctcttcccgttcctttggtgagatgagtggctgggaaggttgggaacccccacggcaactccgcaagttctctatagatgatgttagtatcttcctgccacggttgccatcatgggtgaactctacttttgttccacacctctccgacttgagcttacaagtgcaggccatgaaggcacatgacttcgaagtccttgcaagaattccagagctacgcttcctctctgtggatgtcatggacggattttcatggactgtccctggtggagacggattgttccagaaccttagacgctgccgcacgaacataaaactcacatttctgcagggggcaatgccgatactcatggaggttgaattgtgtgtggcagcgtccaagggttgtgccacctcctacgacattggcttagggaacctcttgctcctgatgacagtagatgtttggatagcgtgtgagggtgcgacggccggtcaagtggaggaagcagagatggtgttgaggcattcagttgatgtccaccccaaccatcccaccattaacgtgaacaaatttcatccacatgtacgattggatttcttttcctaa
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| CDS seq | atgatacagcgcagaagtgaatcatcatcatacatggagttccacagggcaatggccgcagtcatccctaagctgagcaagctgctcatggaagagtatggactaGaaaatagtgtgaaggAggggatcacatttctcaattctgagcttgagagcatgcaagctgaggttgacaagatctcaaaggtgccactagatcaacttgacaGtcaaatcaagatttgggctagagatgttcgggagctatcttatgacatcgaggacaatgttgatacattcatgctatgtgtcgatgatcttgaggcacgcaagaagcatgacttcacatggttaattgacaagtattgtaagtcattgtctgagctaaagatccgccacaaaatagcaaatgatatcaaacatgacattatcccagtaaaggaagttgtggaacgacatgataggtataatgctgatgatgttgattctaagcttccaacaattatagaccctcgcatcttgaaactttatgacaatgtcaccaagcctgttggtgttgacaaggcaagtggtgatctaattaagaagttgtccatggagaccgatgagtcatcccagaagctcaagatgatatcggttgttgggtttggaggattgggcaagacaactcttgccaaagaagtttttggcatgcttagagtgcaatttagctatgtttgttttgtttcagtgggtcggaaacctgatataaagaaagttttgaagagcatcctgattgaagttaataagcagaagcacatgtccaatctagcaaaactaagcgaaagacatctgattgatgagatccgagaatatctcgaaaacaggaggtatttggttgttctggatgacatatgggaaatatccacatgggatattattaaatgtgctatcgtagaaagtaattgcggaagtagagtaattgcaactactcgtatttcccaagttgctgaagaagttggtgatatttataacatggagccactttctaatgataattccaaaagattattcaatagaagaatatttggtgctgactgcataggtacaactaataatcaATCaTCAATTGAGGCAATGGAAAAGGTATTAAAGAAATGTGGTGGTGTTCCATTGTCTATTATTACAATAGCTAGTTTGTTGGTTGATAAACCTCTAGAGGATTGGTCTAACGTGTATGACTCAATTGGTTTTCGGCTAGAAGATAATGAAGCAGTTCAGAACACGAGGAAGATACTATCTTTTAGCTACTATGATATGCCTTCTTACCTAAAGAATTGTTTGTTGCACCTAAGAATTTTCCCAGAAAATTGTTGGATTGAGAAAGAGTCTTTGATATGGAAATGGATAGCCGAAGGCTTCGtacatatggaaccaggaaaagggttatttgaggttggtgaaagatactttaatgagcttattaacaaaagcatgatccaaccaatggatttgatcaattatgagggcaccttggatggttgccgtatccacgatatggttttggacctcatccgcattatttcaactgaggaaagctctacaacagttttggatagaatgcatgaagagcacagcacatctctgttgagcagaaatgtccgtaggttagcactgcatattagttggaatcaagatatagacaataaccttcatgtggacatggcacgtctcaggtcattcaatgcctttgagtgtcctacaagcatgatgcctccacttctggagttccatgctctacgtgtgctagcactggaagattgtgatatcaccggaggtttctttctcaagcatcttgggaacctacaacagttgaggtatctaggaatgagaaacactggtaaagttgagctcccacaggaaatagggaatcttaagcacttgcaaacattggatgtcagggacagtttccttgatgcacttccagtaattgtgtatgaactaagcaagttgttacgcttatgcatggactcattcactgaagttcctgctgggctcggcaatctgaagtccctacaagagctttgggtctatgtatcggatgacagctgcccaaacttcgctgcggagctgagcaacctaactgacctaaaagttctccacattaattggtattgggaggtagacgaggtatcgctgaaggatttggtggagtctctacgcaatctacatagattagaggacctaagcttctcttcccgttcctttggtgagatgagtggctgggaaggttgggaacccccacggcaactccgcaagttctctatagatgatgttagtatcttcctgccacggttgccatcatgggtgaactctacttttgttccacacctctccgacttgagcttacaagtgcaggccatgaaggcacatgacttcgaagtccttgcaagaattccagagctacgcttcctctctgtggatgtcatggacggattttcatggactgtccctggtggagacggattgttccagaaccttagacgctgccgcacgaacataaaactcacatttctgcagggggcaatgccgatactcatggaggttgaattgtgtgtggcagcgtccaagggttgtgccacctcctacgacattggcttagggaacctcttgctcctgatgacagtagatgtttggatagcgtgtgagggtgcgacggccggtcaagtggaggaagcagagatggtgttgaggcattcagttgatgtccaccccaaccatcccaccattaacgtgaacaaatttcatccacatgtacgattggatttcttttcctaa
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| Protein seq | MIQRRSESSSYMEFHRAMAAVIPKLSKLLMEEYGLENSVKEGITFLNSELESMQAEVDKISKVPLDQLDSQIKIWARDVRELSYDIEDNVDTFMLCVDDLEARKKHDFTWLIDKYCKSLSELKIRHKIANDIKHDIIPVKEVVERHDRYNADDVDSKLPTIIDPRILKLYDNVTKPVGVDKASGDLIKKLSMETDESSQKLKMISVVGFGGLGKTTLAKEVFGMLRVQFSYVCFVSVGRKPDIKKVLKSILIEVNKQKHMSNLAKLSERHLIDEIREYLENRRYLVVLDDIWEISTWDIIKCAIVESNCGSRVIATTRISQVAEEVGDIYNMEPLSNDNSKRLFNRRIFGADCIGTTNNQSSIEAMEKVLKKCGGVPLSIITIASLLVDKPLEDWSNVYDSIGFRLEDNEAVQNTRKILSFSYYDMPSYLKNCLLHLRIFPENCWIEKESLIWKWIAEGFVHMEPGKGLFEVGERYFNELINKSMIQPMDLINYEGTLDGCRIHDMVLDLIRIISTEESSTTVLDRMHEEHSTSLLSRNVRRLALHISWNQDIDNNLHVDMARLRSFNAFECPTSMMPPLLEFHALRVLALEDCDITGGFFLKHLGNLQQLRYLGMRNTGKVELPQEIGNLKHLQTLDVRDSFLDALPVIVYELSKLLRLCMDSFTEVPAGLGNLKSLQELWVYVSDDSCPNFAAELSNLTDLKVLHINWYWEVDEVSLKDLVESLRNLHRLEDLSFSSRSFGEMSGWEGWEPPRQLRKFSIDDVSIFLPRLPSWVNSTFVPHLSDLSLQVQAMKAHDFEVLARIPELRFLSVDVMDGFSWTVPGGDGLFQNLRRCRTNIKLTFLQGAMPILMEVELCVAASKGCATSYDIGLGNLLLLMTVDVWIACEGATAGQVEEAEMVLRHSVDVHPNHPTINVNKFHPHVRLDFFS |
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| Function | Disease resistance protein RGA5 [UniProtKB/Swiss-Prot:Q2R8L1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_05g0005160 | OsGoSa_05g0005160.01 | Chr05 | 4523489 | 4527010 | + | NAM | ||
| CDS seq | atgatacagcgcagaagtgaatcatcatcatacatggagttccacagggcaatggccgcagtcatccctaagctgagcaagctgctcatggaagagtatggactaGaaaatagtgtgaaggAggggatcacatttctcaattctgagcttgagagcatgcaagctgaggttgacaagatctcaaaggtgccactagatcaacttgacaGtcaaatcaagatttgggctagagatgttcgggagctatcttatgacatcgaggacaatgttgatacattcatgctatgtgtcgatgatcttgaggcacgcaagaagcatgacttcacatggttaattgacaagtattgtaagtcattgtctgagctaaagatccgccacaaaatagcaaatgatatcaaacatgacattatcccagtaaaggaagttgtggaacgacatgataggtataatgctgatgatgttgattctaagcttccaacaattatagaccctcgcatcttgaaactttatgacaatgtcaccaagcctgttggtgttgacaaggcaagtggtgatctaattaagaagttgtccatggagaccgatgagtcatcccagaagctcaagatgatatcggttgttgggtttggaggattgggcaagacaactcttgccaaagaagtttttggcatgcttagagtgcaatttagctatgtttgttttgtttcagtgggtcggaaacctgatataaagaaagttttgaagagcatcctgattgaagttaataagcagaagcacatgtccaatctagcaaaactaagcgaaagacatctgattgatgagatccgagaatatctcgaaaacaggaggtatttggttgttctggatgacatatgggaaatatccacatgggatattattaaatgtgctatcgtagaaagtaattgcggaagtagagtaattgcaactactcgtatttcccaagttgctgaagaagttggtgatatttataacatggagccactttctaatgataattccaaaagattattcaatagaagaatatttggtgctgactgcataggtacaactaataatcaATCaTCAATTGAGGCAATGGAAAAGGTATTAAAGAAATGTGGTGGTGTTCCATTGTCTATTATTACAATAGCTAGTTTGTTGGTTGATAAACCTCTAGAGGATTGGTCTAACGTGTATGACTCAATTGGTTTTCGGCTAGAAGATAATGAAGCAGTTCAGAACACGAGGAAGATACTATCTTTTAGCTACTATGATATGCCTTCTTACCTAAAGAATTGTTTGTTGCACCTAAGAATTTTCCCAGAAAATTGTTGGATTGAGAAAGAGTCTTTGATATGGAAATGGATAGCCGAAGGCTTCGtacatatggaaccaggaaaagggttatttgaggttggtgaaagatactttaatgagcttattaacaaaagcatgatccaaccaatggatttgatcaattatgagggcaccttggatggttgccgtatccacgatatggttttggacctcatccgcattatttcaactgaggaaagctctacaacagttttggatagaatgcatgaagagcacagcacatctctgttgagcagaaatgtccgtaggttagcactgcatattagttggaatcaagatatagacaataaccttcatgtggacatggcacgtctcaggtcattcaatgcctttgagtgtcctacaagcatgatgcctccacttctggagttccatgctctacgtgtgctagcactggaagattgtgatatcaccggaggtttctttctcaagcatcttgggaacctacaacagttgaggtatctaggaatgagaaacactggtaaagttgagctcccacaggaaatagggaatcttaagcacttgcaaacattggatgtcagggacagtttccttgatgcacttccagtaattgtgtatgaactaagcaagttgttacgcttatgcatggactcattcactgaagttcctgctgggctcggcaatctgaagtccctacaagagctttgggtctatgtatcggatgacagctgcccaaacttcgctgcggagctgagcaacctaactgacctaaaagttctccacattaattggtattgggaggtagacgaggtatcgctgaaggatttggtggagtctctacgcaatctacatagattagaggacctaagcttctcttcccgttcctttggtgagatgagtggctgggaaggttgggaacccccacggcaactccgcaagttctctatagatgatgttagtatcttcctgccacggttgccatcatgggtgaactctacttttgttccacacctctccgacttgagcttacaagtgcaggccatgaaggcacatgacttcgaagtccttgcaagaattccagagctacgcttcctctctgtggatgtcatggacggattttcatggactgtccctggtggagacggattgttccagaaccttagacgctgccgcacgaacataaaactcacatttctgcagggggcaatgccgatactcatggaggttgaattgtgtgtggcagcgtccaagggttgtgccacctcctacgacattggcttagggaacctcttgctcctgatgacagtagatgtttggatagcgtgtgagggtgcgacggccggtcaagtggaggaagcagagatggtgttgaggcattcagttgatgtccaccccaaccatcccaccattaacgtgaacaaatttcatccacatgtacgattggatttcttttcctaa
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| Protein seq | MIQRRSESSSYMEFHRAMAAVIPKLSKLLMEEYGLENSVKEGITFLNSELESMQAEVDKISKVPLDQLDSQIKIWARDVRELSYDIEDNVDTFMLCVDDLEARKKHDFTWLIDKYCKSLSELKIRHKIANDIKHDIIPVKEVVERHDRYNADDVDSKLPTIIDPRILKLYDNVTKPVGVDKASGDLIKKLSMETDESSQKLKMISVVGFGGLGKTTLAKEVFGMLRVQFSYVCFVSVGRKPDIKKVLKSILIEVNKQKHMSNLAKLSERHLIDEIREYLENRRYLVVLDDIWEISTWDIIKCAIVESNCGSRVIATTRISQVAEEVGDIYNMEPLSNDNSKRLFNRRIFGADCIGTTNNQSSIEAMEKVLKKCGGVPLSIITIASLLVDKPLEDWSNVYDSIGFRLEDNEAVQNTRKILSFSYYDMPSYLKNCLLHLRIFPENCWIEKESLIWKWIAEGFVHMEPGKGLFEVGERYFNELINKSMIQPMDLINYEGTLDGCRIHDMVLDLIRIISTEESSTTVLDRMHEEHSTSLLSRNVRRLALHISWNQDIDNNLHVDMARLRSFNAFECPTSMMPPLLEFHALRVLALEDCDITGGFFLKHLGNLQQLRYLGMRNTGKVELPQEIGNLKHLQTLDVRDSFLDALPVIVYELSKLLRLCMDSFTEVPAGLGNLKSLQELWVYVSDDSCPNFAAELSNLTDLKVLHINWYWEVDEVSLKDLVESLRNLHRLEDLSFSSRSFGEMSGWEGWEPPRQLRKFSIDDVSIFLPRLPSWVNSTFVPHLSDLSLQVQAMKAHDFEVLARIPELRFLSVDVMDGFSWTVPGGDGLFQNLRRCRTNIKLTFLQGAMPILMEVELCVAASKGCATSYDIGLGNLLLLMTVDVWIACEGATAGQVEEAEMVLRHSVDVHPNHPTINVNKFHPHVRLDFFS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0240200 | SBH | 2.018401 | 1.757905 | 2.617826 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g15040 | SBH | 1.361988 | 1.224824 | 0.702333 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0240200 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0008550 | SBH | 0.599830 | 11.994838 | 6.114130 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0008600 | SBH | 0.499072 | 6.762794 | 4.518642 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0008480 | SBH | 0.964868 | 7.102261 | 9.432404 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0008560 | SBH | 0.206039 | 0.410442 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0005240 | RBH | 0.0 | 0.000000 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0067600 | RBH | 0.020226 | 0.0883635 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0005000 | RBH | 0.0 | 0.000000 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0068900 | RBH | 0.0186025 | 0.0437995 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0005130 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0005070 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0005610 | RBH | 0.0 | 5.822258 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0005180 | RBH | 0.0 | 0.170764 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0005190 | RBH | 0.0 | 6.077753 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G008390 | SBH | 0.038556 | 0.704895 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0008660 | SBH | 0.0 | 3.117085 | 0.207815 |
