Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsGoSa_01g0001350 OGI:01002440 | 1/16 GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) Chr01:977339-980488
Gene Symbol -
DNA seq

atgagaggatttcttgcagcaacCCTcctggtgttgagccttcttctcaacctgcacacagcagcgtcagtgtcagcgtgggaagacaaggatttcttcagctactgcccaccgtcgaggtgcggcgagcatggccccgagatcaggttccctttcaaacttgaatccaaaaatacaccatcgtcatgtggcgtgccatgcatgaagctatcatgctctggccaatataccatcctacataacaaataccttggaaggccatacaagttgaccgccatagattacaagcatgttctcctgaccgccgtcccgctcgcagacgaagacaactcctcatcgtctccctgcccgcttctaaaatccatatctatcaggccaagcaatggttattacgatacagagtaccagaacacttgtacatattatacctaccatgcagcactagtaagctgttcaacagaatttgcactagctagtgtccctggccctgccaccgataacgattatattgctggccccatctcttgccttagcaaccaaaccCActtctcctatttggtggcttatcatgtaccaatgtctcttcttcccttggactgcgaggtcatctcagatggCcccattccgataccagcttatcactattacactagttatgcttatgcctggaccacgttcagagaaagtgcagaaagaatcatcaatttctctgagaccacgatctcgtggcatttctacgagtacgattgcatgcattgtgaacaacaaggccgacgctgcgcattcagttcacaaaggaatcaaacattctgcatgcgtcgaggtattctctctaaacccctatacaacaggcagtaccatctccgtttatcttctgtacagtaagttttacaatttacatcgctacacatatcaatgcatggtaatactatccaatcgttaaaattggctgtgtacatccgtctcaggatgtagagggcggttatcccattatcttaaaaaaaaaaaaaactgatcgtcaaaatccagcaaaacaatggcaattatgcccgatgtataagaaataaatatttacacgcaaatgagcatcacttgtatcatccaatcatcttataaactgaaagcaggaaatgaacataaccttgatatgctagcaaatgcatgtctgcacctggataaaatttctcaagaaacagagcttatttggtcacagctgtagcatcctgattgcttctagcagtagacaagtagttctcagatgggatgaaacctgagggtatacaagtatgatacaacgagagctgcagttagttgctgcttggttactttgatgggtgtcaaggttaacatagatctgagatgtgataatagataatattgtcaccctttatccacattatccaaccctaacaattctcaatctgccatacctcttgcttagtcaccatagttagcacatgccaatttgcttctcatgatgtcaggctatcagctgaacaaaatgtagggatcatttctagtttagaaataaattcatagataatcaaagcttagctggtccaacacaatctaaaacttatgcgcatacccgtgtcagatttcaccttttctttgtcaagtcaatttctccttttactaatgagactatcgatcaagtctaaattatcttgtttggcatttgcaggttcacatgtcaaagtaattgcaggtactggttcaataatccaaaccttcttttattcaaatgaaaataaaagaaaaagaaacaaagttacctattgcatacttcaagtcttatttttagctaatctgatcttatattatcttatccccattaaaatccctaagtggtggctttctaatttctattcgtaataaatgtgttgatagtccgttcgttcttctgtttctatggaaagatgatcttcccagcatattccactaaacacctgctgttctgagctaggacttagtataaataaaagttgggttatgagctttctttctagaaacaacacaatgccctaatttttattctctgcataatcagctacatcatcagttgccgcaTttgttgttcttttgttgatggtggccactgcactctatctttctctgaagacaaaatataacgaagagatacatctgaaGgtagaaatgtttctcaaaacctatggcacatctaaacccacgaggtacactttctccgaagtaaagaagatatcaagacggttcaaggttaaagtaggacaaggtggatttggaagtgtgtacagaggtgagctaccaaacggagtccctgtggcggttaagatgctagaaaactctgaaggggagggagatgaattcatcaatgaggttgcaactatagggaggatccaccatgcaaacattgtccgcctccttggcttttgctccgaaggaataaggcgggctctcatttacgaatacatgcctaatgattcgctggagaaatatattttttcacaagattctgatacttctcaagaactcctagtaccaagcaagatgctagatattgctttaggcattgcctgaggaatggagtacctgcatcaaggatgtaaccagcgtatcctccactttgatatcaagcctaacaacatcttgctggactataacttcagcccgaagatttcagactttggccttgcaaagctgtgtgcaagggaccaaagcatcattaccttgactgcagcaagaggcacgatgggctatattgcaccagagctatactctcggaactttggagagatatcttacaagtcagatgtttatagttttggcatgctggtgttagaaatggttagcggaaggaggaactcagacccaagtgttgaaagtcaaaatgtggtctatttcccagaatggatctatgagcaggttaccattgggcaggatttagaacttggtagggaaatgactgaagaagagaaagcaataatgagacagctggccattgtggcactgtggtgcattcagtggaacccaaagaaccggccatcaatgacaaaggtggtgaacatgctaacagggaggttgcagaatctacaggtgccacctaagccgtttttctcagctgatagccatcctgtgctgcaagactcaggacatgctggcataatatag

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CDS seq

atgagaggatttcttgcagcaacCCTcctggtgttgagccttcttctcaacctgcacacagcagcgtcagtgtcagcgtgggaagacaaggatttcttcagctactgcccaccgtcgaggtgcggcgagcatggccccgagatcaggttccctttcaaacttgaatccaaaaatacaccatcgtcatgtggcgtgccatgcatgaagctatcatgctctggccaatataccatcctacataacaaataccttggaaggccatacaagttgaccgccatagattacaagcatgttctcctgaccgccgtcccgctcgcagacgaagacaactcctcatcgtctccctgcccgcttctaaaatccatatctatcaggccaagcaatggttattacgatacagagtaccagaacacttgtacatattatacctaccatgcagcactagtaagctgttcaacagaatttgcactagctagtgtccctggccctgccaccgataacgattatattgctggccccatctcttgccttagcaaccaaaccCActtctcctatttggtggcttatcatgtaccaatgtctcttcttcccttggactgcgaggtcatctcagatggCcccattccgataccagcttatcactattacactagttatgcttatgcctggaccacgttcagagaaagtgcagaaagaatcatcaatttctctgagaccacgatctcgtggcatttctacgagtacgattgcatgcattgtgaacaacaaggccgacgctgcgcattcagttcacaaaggaatcaaacattctgcatgcgtcgaggttcacatgtcaaagtaattgcagctacatcatcagttgccgcaTttgttgttcttttgttgatggtggccactgcactctatctttctctgaagacaaaatataacgaagagatacatctgaaGgtagaaatgtttctcaaaacctatggcacatctaaacccacgaggtacactttctccgaagtaaagaagatatcaagacggttcaaggttaaagtaggacaaggtggatttggaagtgtgtacagaggtgagctaccaaacggagtccctgtggcggttaagatgctagaaaactctgaaggggagggagatgaattcatcaatgaggttgcaactatagggaggatccaccatgcaaacattgtccgcctccttggcttttgctccgaaggaataaggcgggctctcatttacgaatacatgcctaatgattcgctggagaaatatattttttcacaagattctgatacttctcaagaactcctacgtatcctccactttgatatcaagcctaacaacatcttgctggactataacttcagcccgaagatttcagactttggccttgcaaagctgtgtgcaagggaccaaagcatcattaccttgactgcagcaagaggcacgatgggctatattgcaccagagctatactctcggaactttggagagatatcttacaagtcagatgtttatagttttggcatgctggtgttagaaatggttagcggaaggaggaactcagacccaagtgttgaaagtcaaaatgtggtctatttcccagaatggatctatgagcaggttaccattgggcaggatttagaacttggtagggaaatgactgaagaagagaaagcaataatgagacagctggccattgtggcactgtggtgcattcagtggaacccaaagaaccggccatcaatgacaaaggtggtgaacatgctaacagggaggttgcagaatctacaggtgccacctaagccgtttttctcagctgatagccatcctgtgctgcaagactcaggacatgctggcataatatag

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Protein seq

MRGFLAATLLVLSLLLNLHTAASVSAWEDKDFFSYCPPSRCGEHGPEIRFPFKLESKNTPSSCGVPCMKLSCSGQYTILHNKYLGRPYKLTAIDYKHVLLTAVPLADEDNSSSSPCPLLKSISIRPSNGYYDTEYQNTCTYYTYHAALVSCSTEFALASVPGPATDNDYIAGPISCLSNQTHFSYLVAYHVPMSLLPLDCEVISDGPIPIPAYHYYTSYAYAWTTFRESAERIINFSETTISWHFYEYDCMHCEQQGRRCAFSSQRNQTFCMRRGSHVKVIAATSSVAAFVVLLLMVATALYLSLKTKYNEEIHLKVEMFLKTYGTSKPTRYTFSEVKKISRRFKVKVGQGGFGSVYRGELPNGVPVAVKMLENSEGEGDEFINEVATIGRIHHANIVRLLGFCSEGIRRALIYEYMPNDSLEKYIFSQDSDTSQELLRILHFDIKPNNILLDYNFSPKISDFGLAKLCARDQSIITLTAARGTMGYIAPELYSRNFGEISYKSDVYSFGMLVLEMVSGRRNSDPSVESQNVVYFPEWIYEQVTIGQDLELGREMTEEEKAIMRQLAIVALWCIQWNPKNRPSMTKVVNMLTGRLQNLQVPPKPFFSADSHPVLQDSGHAGII

Function Rust resistance kinase Lr10 [UniProtKB/Swiss-Prot:P93604]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsGoSa_01g0001350 OsGoSa_01g0001350.01 Chr01 977339 980488 + NAM
CDS seq

atgagaggatttcttgcagcaacCCTcctggtgttgagccttcttctcaacctgcacacagcagcgtcagtgtcagcgtgggaagacaaggatttcttcagctactgcccaccgtcgaggtgcggcgagcatggccccgagatcaggttccctttcaaacttgaatccaaaaatacaccatcgtcatgtggcgtgccatgcatgaagctatcatgctctggccaatataccatcctacataacaaataccttggaaggccatacaagttgaccgccatagattacaagcatgttctcctgaccgccgtcccgctcgcagacgaagacaactcctcatcgtctccctgcccgcttctaaaatccatatctatcaggccaagcaatggttattacgatacagagtaccagaacacttgtacatattatacctaccatgcagcactagtaagctgttcaacagaatttgcactagctagtgtccctggccctgccaccgataacgattatattgctggccccatctcttgccttagcaaccaaaccCActtctcctatttggtggcttatcatgtaccaatgtctcttcttcccttggactgcgaggtcatctcagatggCcccattccgataccagcttatcactattacactagttatgcttatgcctggaccacgttcagagaaagtgcagaaagaatcatcaatttctctgagaccacgatctcgtggcatttctacgagtacgattgcatgcattgtgaacaacaaggccgacgctgcgcattcagttcacaaaggaatcaaacattctgcatgcgtcgaggttcacatgtcaaagtaattgcagctacatcatcagttgccgcaTttgttgttcttttgttgatggtggccactgcactctatctttctctgaagacaaaatataacgaagagatacatctgaaGgtagaaatgtttctcaaaacctatggcacatctaaacccacgaggtacactttctccgaagtaaagaagatatcaagacggttcaaggttaaagtaggacaaggtggatttggaagtgtgtacagaggtgagctaccaaacggagtccctgtggcggttaagatgctagaaaactctgaaggggagggagatgaattcatcaatgaggttgcaactatagggaggatccaccatgcaaacattgtccgcctccttggcttttgctccgaaggaataaggcgggctctcatttacgaatacatgcctaatgattcgctggagaaatatattttttcacaagattctgatacttctcaagaactcctacgtatcctccactttgatatcaagcctaacaacatcttgctggactataacttcagcccgaagatttcagactttggccttgcaaagctgtgtgcaagggaccaaagcatcattaccttgactgcagcaagaggcacgatgggctatattgcaccagagctatactctcggaactttggagagatatcttacaagtcagatgtttatagttttggcatgctggtgttagaaatggttagcggaaggaggaactcagacccaagtgttgaaagtcaaaatgtggtctatttcccagaatggatctatgagcaggttaccattgggcaggatttagaacttggtagggaaatgactgaagaagagaaagcaataatgagacagctggccattgtggcactgtggtgcattcagtggaacccaaagaaccggccatcaatgacaaaggtggtgaacatgctaacagggaggttgcagaatctacaggtgccacctaagccgtttttctcagctgatagccatcctgtgctgcaagactcaggacatgctggcataatatag

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Protein seq

MRGFLAATLLVLSLLLNLHTAASVSAWEDKDFFSYCPPSRCGEHGPEIRFPFKLESKNTPSSCGVPCMKLSCSGQYTILHNKYLGRPYKLTAIDYKHVLLTAVPLADEDNSSSSPCPLLKSISIRPSNGYYDTEYQNTCTYYTYHAALVSCSTEFALASVPGPATDNDYIAGPISCLSNQTHFSYLVAYHVPMSLLPLDCEVISDGPIPIPAYHYYTSYAYAWTTFRESAERIINFSETTISWHFYEYDCMHCEQQGRRCAFSSQRNQTFCMRRGSHVKVIAATSSVAAFVVLLLMVATALYLSLKTKYNEEIHLKVEMFLKTYGTSKPTRYTFSEVKKISRRFKVKVGQGGFGSVYRGELPNGVPVAVKMLENSEGEGDEFINEVATIGRIHHANIVRLLGFCSEGIRRALIYEYMPNDSLEKYIFSQDSDTSQELLRILHFDIKPNNILLDYNFSPKISDFGLAKLCARDQSIITLTAARGTMGYIAPELYSRNFGEISYKSDVYSFGMLVLEMVSGRRNSDPSVESQNVVYFPEWIYEQVTIGQDLELGREMTEEEKAIMRQLAIVALWCIQWNPKNRPSMTKVVNMLTGRLQNLQVPPKPFFSADSHPVLQDSGHAGII

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 1.215799 3.373000 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_01g0117100 SBH 0.000000 0.000000 0.000000
Nipponbare | IRGSP 1.0 | MSU LOC_Os01g02770 SBH 0.894636 1.168902 0.212676
Nipponbare | IRGSP 1.0 | RAP-db Os01g0117100 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_01g0001290 SBH 0.000000 0.000000 0.163405
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_01g0001080 SBH 0.069754 0.307502 0.332710
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_01g0001310 SBH 0.303854 0.000000 0.000000
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_01g0001230 SBH 0.000000 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_01g0001080 SBH 0.185952 2.071903 1.005281
Minghui 63 | MH63RS3 | HZAU OsMH63_01G0016900 SBH 0 0 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_01g0001210 SBH 0.046115 0.000000 0.124310
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_01G0016700 SBH 1.016834 9.1271925 1.156663
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_01g0001170 SBH 0.907174 0.000000 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_01g0001350 SBH 0.470036 0.861946 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_01g0001280 RBH 4.810340 6.290120 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_01g0001370 SBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_01g0001220 SBH 0.084183 0.000000 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_01G001350 SBH 0.584981 0.000000 0.584613
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_01g0000980 SBH 0.068539 1.712051 0.473257
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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