Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsCMeo_11g0024170 OGI:11010520 | 16/16 CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) Chr11:28164121-28167569
Gene Symbol RLCK354, OsRLCK354, RKe, RLCK356, OsRLCK356, XA3, Xa-3, Xa3 (Xa4b, Xa6, Xa9, Xa w), Xa3, Xaw, Xa4-b, XA26, Xa26(t), Xa26(t)*, Xa26, RKb, MRKb, MRKB, TRKb, Xa3/Xa26, MRKc, MRKc, RKc, TRKc
DNA seq

ctaccgaggccctttgtccactacctgcaaagatgcacagtaatccttcttgatcccattcatctttgcaaccacaccgttcattgccatcctctgctcaggtgactcagccgagcactgcaggcccaactcaaatattgacgtaaggaagatattactcctgccagtcaaggaatatcccaacaaagtgttctggtgatcaaaacaaatacatgattcttcatcttgcagtaagttcttgtctgcaacatcagcaagatgttttggaaaagattgagaaacccactgcctcagggttaatccactaatgaacatgggatctgtaggcctctttccagtgaacacctcgagcagcatgattccgaagctgaacacatcgctcttccgtgatgcctttcccatgagtgcatactctatcatagaaattttgaaaccaaaatagttttgtaaaaaattgaatgaagccatatgttctcgtgaaaaataatgtaagtggctctggattgatcagtgcaagtacctggtgccatgtaaccaattgtacctggcatgcttgctgaaaccatggagttttcctccccaagcaacaactttgctatgccaaagtctgccacatgagcagtcatctcttcattaaatagaacattgctaggtttcaagtcacaatgcaggacaacctcatggtgctcgtggtgcagatattccatagccattgacacatctagcataatgttcattctttcgaggaatgatcccatgcaaggattactttcagtgtgcaaatatgactccaagctaccattgggcatgagttgaaggagcagtgctctgaaatccatgttagaacaggtattcaatatccttatcaggttgcgatgtctggctgttcgcaatacatggcactctgcatcgaaagcttgcataactccttcaacctgcatgttgaggactttgattgcaaccaacgaaccatcatctagtcgacccttaaaaactttaccaaaacttccaactccaagtaggttgtcctcattgaaattttcggtagcacgaacaatttcttggtagggcactaacttatgactgatcgcatcagctatgtaaaaggaagctgtaaaatctggcttcttcattttctttccaatcattaggtataagaacacaacaatggcaccaaatgcaatgatgacggcagggagcacaaacttcaacaagtgatttttgctagttgagtgagagttgtccagacatggcaaaaatcctagacgtggagcaccacaaagtccagcatttccgattaaggatagcaaactgatgtttgaaaaaacacctccatttggtatctgaccttgtagactattaaatgagagattcaaagaagtaagataggtgaagttggcaaaatactttggtatgctaccagaaaggttgttttgagacaggtccaatgttgctaaactaattagatctttgaaagagtttggaattgaatcactcaatctgttgtgagatagatttaggtaggttaacagttggagctgtccgaatgaagttgggaggctaccatccaaattgtttgcagagatgtttattagatctattgcttttaaggggctgagatcagaaggcaatgcaccagttaagttattgtgagatacatctagctggagaagattgctaagattaactaatcttgcaggtatagctgatgacaaccagttatatgacagcgataaatattgcaatgtgcttaggttgccgatacctttaggaatggaaccagagaaatagttgtcatcaagaaatagtccatcaatacttttaagggtaccaatttgagttgggattggtccaaacatgctatttatggagaggtctaatgattgtaaattctccatttgcacaagagaatctgggatcatgccacttatttggttttcagaaaggtctattacattcaagtttgtcagatttgatatggtagtcggaacactaccagtcaagttgttaccccctgcgtaaaaagatactaaattgctagagaggtttgcaagtaaatctgcaggaatggtccctgagaatgaattcactcctatgctgaggaattgtagttgcctgcaattggagagaggggcaaagaagtcaagttttccttgcagatgattttgtccaatatgaaggcggtacagtgatctaaggttcccaagtgtccttggtactagcccggtcagctggttccctcctaattctaggtaagataattttgtcaagttaccaatgaaactaggaaaaggaccggttagctgattaactgagatgtgcaataccgtgagctgtgtcatctttcccaggtccattggaatcgttcccgttaggttgcaaaatgccaaatcaagtacaccgagcatggtgagattgcttagcacagctgggatcgaaccgacaaggtcatttccacctagagagagggcgttgacatggggcatgccggctaaccattccggcacacgatccgccaagagatttgcacctaaaccaagtttctggagtttctgacatgccattaatccaagtggaattcgacctgtgagtttgttgtaagagagtgacatctcccgaatcatggggaggctaatgctctggtttccagctgggaatgggataggtccagtcagattgtttccagtgacatacagcttttcaagtctggacatgttgaagatggttgggggaagtgagccggacaattgattgtacttaagaacaaggacctgcagcatgggcaacgagccaatcaagctcggtattggccctgacaagctgttgttacctaataatatttcgcttaggacgcttgagttgctgaacaaaagctttggaatagtgccacttaagtaattcgctcctaggttgatgtgcatgagattgcgcatgcagttttgtagctcgggtggtatctgccctgagagatgattgttaaaaaggacaagagaattgagcctcgtgaggtttcccatggtagatgggatggaacctgacaaggtgttgccggtgagatcaaggtatctcagacgagctaaccttccgagctcggctggaatggggcctgtgaggctggtgttggtgaggttgaggacggcaagaaaagaaaggttaccgaggtgaggggtgatcgatccttggagcggagtgtccggcaggacgagagcggtgacgctctgccggcgccggccgccgcacgacacgccgacccagctgcatatggagacgttggccgtccagccgtcacgtaggacgccgagagggtcggcgagctgcgccttgaacgccagcagcgcagcgaggtcggtgtccttgctgctgctgcttccaacactagtggccgtggcgatgaagactactgctgctgctgttaatgtcaacggcgacaagtagtgcgcaaccgccat

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CDS seq

atggcggttgcgcactacttgtcgccgttgacattaacagcagcagcagtagtcttcatcgccacggccactagtgttggaagcagcagcagcaaggacaccgacctcgctgcgctgctggcgttcaaggcgcagctcgccgaccctctcggcgtcctacgtgacggctggacggccaacgtctccatatgcagctgggtcggcgtgtcgtgcggcggccggcgccggcagagcgtcaccgctctcgtcctgccggacactccgctccaaggatcgatcacccctcacctcggtaacctttcttttcttgccgtcctcaacctcaccaacaccagcctcacaggccccattccagccgagctcggaaggttagctcgtctgagataccttgatctcaccggcaacaccttgtcaggttccatcccatctaccatgggaaacctcacgaggctcaattctcttgtcctttttaacaatcatctctcagggcagataccacccgagctacaaaactgcatgcgcaatctcatgcacatcaacctaggagcgaattacttaagtggcactattccaaagcttttgttcagcaactcaagcgtcctaagcgaaatattattaggtaacaacagcttgtcagggccaataccgagcttgattggctcgttgcccatgctgcaggtccttgttcttaagtacaatcaattgtccggctcacttcccccaaccatcttcaacatgtccagacttgaaaagctgtatgtcactggaaacaatctgactggacctatcccattcccagctggaaaccagagcattagcctccccatgattcgggagatgtcactctcttacaacaaactcacaggtcgaattccacttggattaatggcatgtcagaaactccagaaacttggtttaggtgcaaatctcttggcggatcgtgtgccggaatggttagccggcatgccccatgtcaacgccctctctctaggtggaaatgaccttgtcggttcgatcccagctgtgctaagcaatctcaccatgctcggtgtacttgatttggcattttgcaacctaacgggaacgattccaatggacctgggaaagatgacacagctcacggtattgcacatctcagttaatcagctaaccggtccttttcctagtttcattggtaacttgacaaaattatcttacctagaattaggagggaaccagctgaccgggctagtaccaaggacacttgggaaccttagatcactgtaccgccttcatattggacaaaatcatctgcaaggaaaacttgacttctttgcccctctctccaattgcaggcaactacaattcctcagcataggagtgaattcattctcagggaccattcctgcagatttacttgcaaacctctctagcaatttagtatctttttacgcagggggtaacaacttgactggtagtgttccgactaccatatcaaatctgacaaacttgaatgtaatagacctttctgaaaaccaaataagtggcatgatcccagattctcttgtgcaaatggagaatttacaatcattagacctctccataaatagcatgtttggaccaatcccaactcaaattggtacccttaaaagtattgatggactatttcttgatgacaactatttctctggttccattcctaaaggtatcggcaacctaagcacattgcaatatttatcgctgtcatataactggttgtcatcagctatacctgcaagattagttaatcttagcaatcttctccagctagatgtatctcacaataacttaactggtgcattgccttctgatctcagccccttaaaagcaatagatctaataaacatctctgcaaacaatttggatggtagcctcccaacttcattcggacagctccaactgttaacctacctaaatctatctcacaacagattgagtgattcaattccaaactctttcaaagatctaattagtttagcaacattggacctgtctcaaaacaacctttctggtagcataccaaagtattttgccaacttcacctatcttacttctttgaatctctcatttaatagtctacaaggtcagataccaaatggaggtgttttttcaaacatcagtttgctatccttaatcggaaatgctggactttgtggtgctccacgtctaggatttttgccatgtctggacaactctcactcaactagcaaaaatcacttgttgaagtttgtgctccctgccgtcatcattgcatttggtgccattgttgtgttcttatacctaatgattggaaagaaaatgaagaagccagattttacagcttccttttacatagctgatgcgatcagtcataagttagtgccctaccaagaaattgttcgtgctaccgaaaatttcaatgaggacaacctacttggagttggaagttttggtaaagtttttaagggtcgactagatgatggttcgttggttgcaatcaaagtcctcaacatgcaggttgaaggagttatgcaagctttcgatgcagagtgccatgtattgcgaacagccagacatcgcaacctgataaggatattgaatacctgttctaacatggatttcagagcactgctccttcaactcatgcccaatggtagcttggagtcatatttgcacactgaaagtaatccttgcatgggatcattcctcgaaagaatgaacattatgctagatgtgtcaatggctatggaatatctgcaccacgagcaccatgaggttgtcctgcattgtgacttgaaacctagcaatgttctatttaatgaagagatgactgctcatgtggcagactttggcatagcaaagttgttgcttggggaggaaaactccatggtttcagcaagcatgccaggtacaattggttacatggcaccagagtatgcactcatgggaaaggcatcacggaagagcgatgtgttcagcttcggaatcatgctgctcgaggtgttcactggaaagaggcctacagatcccatgttcattagtggattaaccctgaggcagtgggtttctcaatcttttccaaaacatcttgctgatgttgcagacaagaacttactgcaagatgaagaatcatgtatttgttttgatcaccagaacactttgttgggatattccttgactggcaggagtaatatcttccttacgtcaatatttgagttgggcctgcagtgctcggctgagtcacctgagcagaggatggcaatgaacggtgtggttgcaaagatgaatgggatcaagaaggattactgtgcatctttgcaggtagtggacaaagggcctcggtag

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Protein seq

MAVAHYLSPLTLTAAAVVFIATATSVGSSSSKDTDLAALLAFKAQLADPLGVLRDGWTANVSICSWVGVSCGGRRRQSVTALVLPDTPLQGSITPHLGNLSFLAVLNLTNTSLTGPIPAELGRLARLRYLDLTGNTLSGSIPSTMGNLTRLNSLVLFNNHLSGQIPPELQNCMRNLMHINLGANYLSGTIPKLLFSNSSVLSEILLGNNSLSGPIPSLIGSLPMLQVLVLKYNQLSGSLPPTIFNMSRLEKLYVTGNNLTGPIPFPAGNQSISLPMIREMSLSYNKLTGRIPLGLMACQKLQKLGLGANLLADRVPEWLAGMPHVNALSLGGNDLVGSIPAVLSNLTMLGVLDLAFCNLTGTIPMDLGKMTQLTVLHISVNQLTGPFPSFIGNLTKLSYLELGGNQLTGLVPRTLGNLRSLYRLHIGQNHLQGKLDFFAPLSNCRQLQFLSIGVNSFSGTIPADLLANLSSNLVSFYAGGNNLTGSVPTTISNLTNLNVIDLSENQISGMIPDSLVQMENLQSLDLSINSMFGPIPTQIGTLKSIDGLFLDDNYFSGSIPKGIGNLSTLQYLSLSYNWLSSAIPARLVNLSNLLQLDVSHNNLTGALPSDLSPLKAIDLINISANNLDGSLPTSFGQLQLLTYLNLSHNRLSDSIPNSFKDLISLATLDLSQNNLSGSIPKYFANFTYLTSLNLSFNSLQGQIPNGGVFSNISLLSLIGNAGLCGAPRLGFLPCLDNSHSTSKNHLLKFVLPAVIIAFGAIVVFLYLMIGKKMKKPDFTASFYIADAISHKLVPYQEIVRATENFNEDNLLGVGSFGKVFKGRLDDGSLVAIKVLNMQVEGVMQAFDAECHVLRTARHRNLIRILNTCSNMDFRALLLQLMPNGSLESYLHTESNPCMGSFLERMNIMLDVSMAMEYLHHEHHEVVLHCDLKPSNVLFNEEMTAHVADFGIAKLLLGEENSMVSASMPGTIGYMAPEYALMGKASRKSDVFSFGIMLLEVFTGKRPTDPMFISGLTLRQWVSQSFPKHLADVADKNLLQDEESCICFDHQNTLLGYSLTGRSNIFLTSIFELGLQCSAESPEQRMAMNGVVAKMNGIKKDYCASLQVVDKGPR

Function Probable LRR receptor-like serine/threonine-protein kinase At3g47570 [UniProtKB/Swiss-Prot:C0LGP4]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsCMeo_11g0024170 OsCMeo_11g0024170.01 Chr11 28164121 28167569 - NAM
CDS seq

atggcggttgcgcactacttgtcgccgttgacattaacagcagcagcagtagtcttcatcgccacggccactagtgttggaagcagcagcagcaaggacaccgacctcgctgcgctgctggcgttcaaggcgcagctcgccgaccctctcggcgtcctacgtgacggctggacggccaacgtctccatatgcagctgggtcggcgtgtcgtgcggcggccggcgccggcagagcgtcaccgctctcgtcctgccggacactccgctccaaggatcgatcacccctcacctcggtaacctttcttttcttgccgtcctcaacctcaccaacaccagcctcacaggccccattccagccgagctcggaaggttagctcgtctgagataccttgatctcaccggcaacaccttgtcaggttccatcccatctaccatgggaaacctcacgaggctcaattctcttgtcctttttaacaatcatctctcagggcagataccacccgagctacaaaactgcatgcgcaatctcatgcacatcaacctaggagcgaattacttaagtggcactattccaaagcttttgttcagcaactcaagcgtcctaagcgaaatattattaggtaacaacagcttgtcagggccaataccgagcttgattggctcgttgcccatgctgcaggtccttgttcttaagtacaatcaattgtccggctcacttcccccaaccatcttcaacatgtccagacttgaaaagctgtatgtcactggaaacaatctgactggacctatcccattcccagctggaaaccagagcattagcctccccatgattcgggagatgtcactctcttacaacaaactcacaggtcgaattccacttggattaatggcatgtcagaaactccagaaacttggtttaggtgcaaatctcttggcggatcgtgtgccggaatggttagccggcatgccccatgtcaacgccctctctctaggtggaaatgaccttgtcggttcgatcccagctgtgctaagcaatctcaccatgctcggtgtacttgatttggcattttgcaacctaacgggaacgattccaatggacctgggaaagatgacacagctcacggtattgcacatctcagttaatcagctaaccggtccttttcctagtttcattggtaacttgacaaaattatcttacctagaattaggagggaaccagctgaccgggctagtaccaaggacacttgggaaccttagatcactgtaccgccttcatattggacaaaatcatctgcaaggaaaacttgacttctttgcccctctctccaattgcaggcaactacaattcctcagcataggagtgaattcattctcagggaccattcctgcagatttacttgcaaacctctctagcaatttagtatctttttacgcagggggtaacaacttgactggtagtgttccgactaccatatcaaatctgacaaacttgaatgtaatagacctttctgaaaaccaaataagtggcatgatcccagattctcttgtgcaaatggagaatttacaatcattagacctctccataaatagcatgtttggaccaatcccaactcaaattggtacccttaaaagtattgatggactatttcttgatgacaactatttctctggttccattcctaaaggtatcggcaacctaagcacattgcaatatttatcgctgtcatataactggttgtcatcagctatacctgcaagattagttaatcttagcaatcttctccagctagatgtatctcacaataacttaactggtgcattgccttctgatctcagccccttaaaagcaatagatctaataaacatctctgcaaacaatttggatggtagcctcccaacttcattcggacagctccaactgttaacctacctaaatctatctcacaacagattgagtgattcaattccaaactctttcaaagatctaattagtttagcaacattggacctgtctcaaaacaacctttctggtagcataccaaagtattttgccaacttcacctatcttacttctttgaatctctcatttaatagtctacaaggtcagataccaaatggaggtgttttttcaaacatcagtttgctatccttaatcggaaatgctggactttgtggtgctccacgtctaggatttttgccatgtctggacaactctcactcaactagcaaaaatcacttgttgaagtttgtgctccctgccgtcatcattgcatttggtgccattgttgtgttcttatacctaatgattggaaagaaaatgaagaagccagattttacagcttccttttacatagctgatgcgatcagtcataagttagtgccctaccaagaaattgttcgtgctaccgaaaatttcaatgaggacaacctacttggagttggaagttttggtaaagtttttaagggtcgactagatgatggttcgttggttgcaatcaaagtcctcaacatgcaggttgaaggagttatgcaagctttcgatgcagagtgccatgtattgcgaacagccagacatcgcaacctgataaggatattgaatacctgttctaacatggatttcagagcactgctccttcaactcatgcccaatggtagcttggagtcatatttgcacactgaaagtaatccttgcatgggatcattcctcgaaagaatgaacattatgctagatgtgtcaatggctatggaatatctgcaccacgagcaccatgaggttgtcctgcattgtgacttgaaacctagcaatgttctatttaatgaagagatgactgctcatgtggcagactttggcatagcaaagttgttgcttggggaggaaaactccatggtttcagcaagcatgccaggtacaattggttacatggcaccagagtatgcactcatgggaaaggcatcacggaagagcgatgtgttcagcttcggaatcatgctgctcgaggtgttcactggaaagaggcctacagatcccatgttcattagtggattaaccctgaggcagtgggtttctcaatcttttccaaaacatcttgctgatgttgcagacaagaacttactgcaagatgaagaatcatgtatttgttttgatcaccagaacactttgttgggatattccttgactggcaggagtaatatcttccttacgtcaatatttgagttgggcctgcagtgctcggctgagtcacctgagcagaggatggcaatgaacggtgtggttgcaaagatgaatgggatcaagaaggattactgtgcatctttgcaggtagtggacaaagggcctcggtag

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Protein seq

MAVAHYLSPLTLTAAAVVFIATATSVGSSSSKDTDLAALLAFKAQLADPLGVLRDGWTANVSICSWVGVSCGGRRRQSVTALVLPDTPLQGSITPHLGNLSFLAVLNLTNTSLTGPIPAELGRLARLRYLDLTGNTLSGSIPSTMGNLTRLNSLVLFNNHLSGQIPPELQNCMRNLMHINLGANYLSGTIPKLLFSNSSVLSEILLGNNSLSGPIPSLIGSLPMLQVLVLKYNQLSGSLPPTIFNMSRLEKLYVTGNNLTGPIPFPAGNQSISLPMIREMSLSYNKLTGRIPLGLMACQKLQKLGLGANLLADRVPEWLAGMPHVNALSLGGNDLVGSIPAVLSNLTMLGVLDLAFCNLTGTIPMDLGKMTQLTVLHISVNQLTGPFPSFIGNLTKLSYLELGGNQLTGLVPRTLGNLRSLYRLHIGQNHLQGKLDFFAPLSNCRQLQFLSIGVNSFSGTIPADLLANLSSNLVSFYAGGNNLTGSVPTTISNLTNLNVIDLSENQISGMIPDSLVQMENLQSLDLSINSMFGPIPTQIGTLKSIDGLFLDDNYFSGSIPKGIGNLSTLQYLSLSYNWLSSAIPARLVNLSNLLQLDVSHNNLTGALPSDLSPLKAIDLINISANNLDGSLPTSFGQLQLLTYLNLSHNRLSDSIPNSFKDLISLATLDLSQNNLSGSIPKYFANFTYLTSLNLSFNSLQGQIPNGGVFSNISLLSLIGNAGLCGAPRLGFLPCLDNSHSTSKNHLLKFVLPAVIIAFGAIVVFLYLMIGKKMKKPDFTASFYIADAISHKLVPYQEIVRATENFNEDNLLGVGSFGKVFKGRLDDGSLVAIKVLNMQVEGVMQAFDAECHVLRTARHRNLIRILNTCSNMDFRALLLQLMPNGSLESYLHTESNPCMGSFLERMNIMLDVSMAMEYLHHEHHEVVLHCDLKPSNVLFNEEMTAHVADFGIAKLLLGEENSMVSASMPGTIGYMAPEYALMGKASRKSDVFSFGIMLLEVFTGKRPTDPMFISGLTLRQWVSQSFPKHLADVADKNLLQDEESCICFDHQNTLLGYSLTGRSNIFLTSIFELGLQCSAESPEQRMAMNGVVAKMNGIKKDYCASLQVVDKGPR

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.667104 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_11g0695000 SBH 2.569778 3.126565 0.351838
Nipponbare | IRGSP 1.0 | MSU LOC_Os11g47310 SBH 0.046286 0.0 0.043063
Nipponbare | IRGSP 1.0 | RAP-db Os11g0695000 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_11g0024590 SBH 0.0 5.368335 1.046873
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_11g0024610 SBH 0.0 1.959447 0.097477
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_11g0024160 SBH 0.0 14.940664 4.490395
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_11g0023900 SBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_11g0024390 RBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_11G0444900 SBH 0.0035985 16.211173 0.0034995
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_11g0024890 RBH 0.0 0.0 0.000000
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_11G0440500 SBH 0.005107 0.2015625 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_11g0024770 SBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_11g0024760 SBH 0.027641 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_11g0024180 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_11g0023910 SBH 0.018860 0.0 0.000000
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_11g0024350 SBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_11G024320 SBH 0.088229 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_11g0024490 SBH 0.0 2.211889 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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